Metagenome / Metatranscriptome Family F048435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	46 residues
Representative Sequence	PVIVEWERGDFDDELVEVSHEQASKIIEYFRHQWGPSGQPLDS
Number of Associated Samples	124
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.81 %
% of genes near scaffold ends (potentially truncated)	87.16 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.568 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.486 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.243 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.13% β-sheet: 0.00% Coil/Unstructured: 78.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF05973	Gp49	13.51
PF07729	FCD	2.70
PF07929	PRiA4_ORF3	2.70
PF01381	HTH_3	2.70
PF11535	Calci_bind_CcbP	2.70
PF00293	NUDIX	2.03
PF02566	OsmC	2.03
PF02810	SEC-C	2.03
PF12802	MarR_2	1.35
PF07690	MFS_1	1.35
PF04149	DUF397	1.35
PF11774	Lsr2	0.68
PF09660	DUF2397	0.68
PF13508	Acetyltransf_7	0.68
PF13520	AA_permease_2	0.68
PF10282	Lactonase	0.68
PF13649	Methyltransf_25	0.68
PF12840	HTH_20	0.68
PF05345	He_PIG	0.68
PF11236	DUF3037	0.68
PF00291	PALP	0.68
PF06779	MFS_4	0.68
PF01855	POR_N	0.68
PF01047	MarR	0.68
PF05685	Uma2	0.68
PF13411	MerR_1	0.68
PF04672	Methyltransf_19	0.68
PF13640	2OG-FeII_Oxy_3	0.68
PF13463	HTH_27	0.68
PF13546	DDE_5	0.68
PF00067	p450	0.68
PF07592	DDE_Tnp_ISAZ013	0.68
PF01850	PIN	0.68
PF13006	Nterm_IS4	0.68
PF03417	AAT	0.68
PF00392	GntR	0.68
PF13845	Septum_form	0.68
PF00440	TetR_N	0.68
PF01670	Glyco_hydro_12	0.68
PF00583	Acetyltransf_1	0.68
PF13828	DUF4190	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	13.51
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	13.51
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.70
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.70
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.03
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.03
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.68
COG2124	Cytochrome P450	Defense mechanisms [V]	0.68
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.68
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.68
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.57 %
Unclassified	root	N/A	32.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.57 %
Unclassified	root	N/A	32.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.57 %
Unclassified	root	N/A	32.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.78 %
Unclassified	root	N/A	32.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.70 %
Unclassified	root	N/A	32.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.03 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.16 %
Unclassified	root	N/A	32.43 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2.03 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.68 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.14 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.73 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.73 %
Sulfuricellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae	2.03 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.35 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.35 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.68 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.14 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.73 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.70 %
Sulfuriferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula	2.03 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	1.35 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.35 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.14 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.73 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.70 %
Sulfuriferula multivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	2.03 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.35 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.35 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.14 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.70 %
Sulfuriferula multivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	2.03 %
Actinomadura barringtoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1.35 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1.35 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_107520593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300004633\|Ga0066395_10820708	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005332\|Ga0066388_101472811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1188	Open in IMG/M
3300005467\|Ga0070706_101689723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300005994\|Ga0066789_10238758	Not Available	763	Open in IMG/M
3300006028\|Ga0070717_10557933	Not Available	1037	Open in IMG/M
3300006176\|Ga0070765_100640897	Not Available	1003	Open in IMG/M
3300006176\|Ga0070765_101439477	Not Available	649	Open in IMG/M
3300006800\|Ga0066660_11541315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300006804\|Ga0079221_11575177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	531	Open in IMG/M
3300006806\|Ga0079220_10049981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1966	Open in IMG/M
3300006854\|Ga0075425_103141283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	503	Open in IMG/M
3300006893\|Ga0073928_10327133	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300006904\|Ga0075424_102129457	Not Available	591	Open in IMG/M
3300009038\|Ga0099829_10715718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300009523\|Ga0116221_1406453	Not Available	593	Open in IMG/M
3300009552\|Ga0116138_1146711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300009665\|Ga0116135_1425640	Not Available	542	Open in IMG/M
3300010360\|Ga0126372_10613644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1046	Open in IMG/M
3300010361\|Ga0126378_10159921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	2302	Open in IMG/M
3300010379\|Ga0136449_102064940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300010379\|Ga0136449_103422261	Not Available	606	Open in IMG/M
3300010876\|Ga0126361_10587694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300010876\|Ga0126361_10589375	Not Available	1235	Open in IMG/M
3300010880\|Ga0126350_11451803	Not Available	531	Open in IMG/M
3300011269\|Ga0137392_10384072	Not Available	1165	Open in IMG/M
3300012201\|Ga0137365_10020086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5201	Open in IMG/M
3300012205\|Ga0137362_11738900	Not Available	510	Open in IMG/M
3300012206\|Ga0137380_10398923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1222	Open in IMG/M
3300012209\|Ga0137379_10035657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4797	Open in IMG/M
3300012210\|Ga0137378_11280634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300012285\|Ga0137370_10893429	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300012350\|Ga0137372_10586283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300012351\|Ga0137386_10061614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2607	Open in IMG/M
3300012357\|Ga0137384_10612917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300012363\|Ga0137390_11451004	Not Available	629	Open in IMG/M
3300012532\|Ga0137373_10059523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3505	Open in IMG/M
3300012683\|Ga0137398_10462271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	869	Open in IMG/M
3300016371\|Ga0182034_11777483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300016371\|Ga0182034_11792847	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300016387\|Ga0182040_10493432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300016387\|Ga0182040_10993417	Not Available	699	Open in IMG/M
3300016387\|Ga0182040_11249505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300016422\|Ga0182039_10924057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	780	Open in IMG/M
3300016422\|Ga0182039_11702850	Not Available	577	Open in IMG/M
3300017821\|Ga0187812_1290324	Not Available	520	Open in IMG/M
3300017926\|Ga0187807_1037073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1509	Open in IMG/M
3300017937\|Ga0187809_10095651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	992	Open in IMG/M
3300017955\|Ga0187817_10977536	Not Available	542	Open in IMG/M
3300017961\|Ga0187778_10058056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2367	Open in IMG/M
3300017966\|Ga0187776_10795131	Not Available	678	Open in IMG/M
3300017970\|Ga0187783_10306395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1158	Open in IMG/M
3300017970\|Ga0187783_10530281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	853	Open in IMG/M
3300017970\|Ga0187783_10566298	Not Available	822	Open in IMG/M
3300017970\|Ga0187783_11194245	Not Available	548	Open in IMG/M
3300017972\|Ga0187781_10013265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5857	Open in IMG/M
3300017972\|Ga0187781_11077086	Not Available	589	Open in IMG/M
3300017975\|Ga0187782_10048442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3094	Open in IMG/M
3300018020\|Ga0187861_10092878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1468	Open in IMG/M
3300018033\|Ga0187867_10202131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1129	Open in IMG/M
3300018042\|Ga0187871_10044342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2708	Open in IMG/M
3300018060\|Ga0187765_10815417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	624	Open in IMG/M
3300018085\|Ga0187772_10038151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2894	Open in IMG/M
3300018086\|Ga0187769_10161842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1643	Open in IMG/M
3300018086\|Ga0187769_10224491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1394	Open in IMG/M
3300021178\|Ga0210408_10186873	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300021374\|Ga0213881_10007113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4595	Open in IMG/M
3300021388\|Ga0213875_10072716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1605	Open in IMG/M
3300021560\|Ga0126371_10721193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1145	Open in IMG/M
3300025910\|Ga0207684_10428874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1136	Open in IMG/M
3300025910\|Ga0207684_10446248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1111	Open in IMG/M
3300025910\|Ga0207684_11483060	Not Available	553	Open in IMG/M
3300025939\|Ga0207665_10005900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8149	Open in IMG/M
3300026078\|Ga0207702_12150795	Not Available	547	Open in IMG/M
3300027432\|Ga0209421_1126241	Not Available	527	Open in IMG/M
3300027497\|Ga0208199_1020480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1481	Open in IMG/M
3300027625\|Ga0208044_1011963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3286	Open in IMG/M
3300027641\|Ga0208827_1018943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2557	Open in IMG/M
3300027725\|Ga0209178_1384519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuriferula → Sulfuriferula multivorans	530	Open in IMG/M
3300027765\|Ga0209073_10005459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3137	Open in IMG/M
3300027817\|Ga0209112_10161863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	755	Open in IMG/M
3300027895\|Ga0209624_10728793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	653	Open in IMG/M
3300028047\|Ga0209526_10614615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300028906\|Ga0308309_10325957	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300030503\|Ga0311370_10530709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1432	Open in IMG/M
3300031236\|Ga0302324_102576763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300031544\|Ga0318534_10262502	Not Available	996	Open in IMG/M
3300031545\|Ga0318541_10750510	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031546\|Ga0318538_10393198	Not Available	750	Open in IMG/M
3300031564\|Ga0318573_10686447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	550	Open in IMG/M
3300031572\|Ga0318515_10107815	Not Available	1465	Open in IMG/M
3300031668\|Ga0318542_10515743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	622	Open in IMG/M
3300031679\|Ga0318561_10715747	Not Available	550	Open in IMG/M
3300031708\|Ga0310686_100100970	Not Available	1286	Open in IMG/M
3300031708\|Ga0310686_110263238	Not Available	1704	Open in IMG/M
3300031719\|Ga0306917_11581158	Not Available	503	Open in IMG/M
3300031723\|Ga0318493_10797131	Not Available	532	Open in IMG/M
3300031736\|Ga0318501_10244551	Not Available	948	Open in IMG/M
3300031744\|Ga0306918_10521897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	930	Open in IMG/M
3300031744\|Ga0306918_11402685	All Organisms → cellular organisms → Bacteria → Terrabacteria group	535	Open in IMG/M
3300031747\|Ga0318502_10403239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	813	Open in IMG/M
3300031748\|Ga0318492_10635391	Not Available	570	Open in IMG/M
3300031751\|Ga0318494_10114321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1499	Open in IMG/M
3300031751\|Ga0318494_10400389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	796	Open in IMG/M
3300031770\|Ga0318521_10533920	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031770\|Ga0318521_10753290	Not Available	592	Open in IMG/M
3300031778\|Ga0318498_10192321	All Organisms → cellular organisms → Bacteria → Terrabacteria group	926	Open in IMG/M
3300031781\|Ga0318547_10481976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300031781\|Ga0318547_10990272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300031792\|Ga0318529_10523544	Not Available	551	Open in IMG/M
3300031796\|Ga0318576_10277493	Not Available	791	Open in IMG/M
3300031821\|Ga0318567_10152580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1278	Open in IMG/M
3300031832\|Ga0318499_10215183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	748	Open in IMG/M
3300031833\|Ga0310917_10930377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300031835\|Ga0318517_10369477	Not Available	648	Open in IMG/M
3300031860\|Ga0318495_10404631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300031893\|Ga0318536_10379177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715	Open in IMG/M
3300031894\|Ga0318522_10311196	Not Available	597	Open in IMG/M
3300031897\|Ga0318520_10345056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	903	Open in IMG/M
3300031912\|Ga0306921_10475645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1454	Open in IMG/M
3300031912\|Ga0306921_12053487	Not Available	607	Open in IMG/M
3300031954\|Ga0306926_10146199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2925	Open in IMG/M
3300031954\|Ga0306926_11924095	All Organisms → cellular organisms → Bacteria → Terrabacteria group	667	Open in IMG/M
3300031954\|Ga0306926_12381071	Not Available	584	Open in IMG/M
3300032001\|Ga0306922_10163122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2387	Open in IMG/M
3300032009\|Ga0318563_10241287	Not Available	976	Open in IMG/M
3300032044\|Ga0318558_10215619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	939	Open in IMG/M
3300032060\|Ga0318505_10423698	Not Available	629	Open in IMG/M
3300032068\|Ga0318553_10741644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300032076\|Ga0306924_11959546	All Organisms → cellular organisms → Bacteria → Terrabacteria group	605	Open in IMG/M
3300032090\|Ga0318518_10263960	All Organisms → cellular organisms → Bacteria → Terrabacteria group	884	Open in IMG/M
3300032091\|Ga0318577_10645340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300032094\|Ga0318540_10137577	Not Available	1166	Open in IMG/M
3300032160\|Ga0311301_10163980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3956	Open in IMG/M
3300032160\|Ga0311301_11485223	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300032261\|Ga0306920_104083133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	528	Open in IMG/M
3300032770\|Ga0335085_11279178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300032805\|Ga0335078_11125546	Not Available	915	Open in IMG/M
3300032829\|Ga0335070_10643956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	994	Open in IMG/M
3300032892\|Ga0335081_10993138	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300032895\|Ga0335074_10260266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2030	Open in IMG/M
3300032895\|Ga0335074_11470416	Not Available	545	Open in IMG/M
3300032896\|Ga0335075_11617339	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300032954\|Ga0335083_10195807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1855	Open in IMG/M
3300033158\|Ga0335077_10545811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1218	Open in IMG/M
3300033289\|Ga0310914_11447966	Not Available	590	Open in IMG/M
3300033475\|Ga0310811_11324721	Not Available	569	Open in IMG/M
3300034199\|Ga0370514_041241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1154	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.30%
Host-Associated	Host-Associated	2.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.54%
Aquatic	Environmental → Aquatic	6.76%
Plants	Host-Associated → Plants	2.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.51%
Freshwater	Environmental → Aquatic → Freshwater	6.08%
Peat	Environmental → Terrestrial → Peat	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.22%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.05%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.35%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.08%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.05%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.03%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.35%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.35%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1075205931	3300000955	Soil	GLVRRLEHEDGPSDEVLRDDFSWKSTPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQP
Ga0066395_108207082	3300004633	Tropical Forest Soil	PVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPFDS*
Ga0066388_1014728111	3300005332	Tropical Forest Soil	RRLEHEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVGHEQASKIIEYFRQKWGSHGQPLDS*
Ga0070706_1016897232	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RSAGYARPGLLFTPVITEWERGDFDDELVEVSHEQAEKIIRYFRERWGPYGQPLDS*
Ga0066789_102387581	3300005994	Soil	EALRRDFSWKFTPVIIEWERGDFAEELVEVSHEQASKILEYFRGRWGASGGA*
Ga0070717_105579332	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FSPAIVEWEHGDLDDELVEVSHEQASKIIEYFRSRWGPHGQPLDS*
Ga0070765_1006408971	3300006176	Soil	EGLRKDFSWDFTPLIVEWERGDFGQELIEVSHEQASKIIEYFRSRWGPHGQPLDS*
Ga0070765_1014394772	3300006176	Soil	TPVIVEWEHGNFDDELIEVSHELASKIIDYFRERWGPLGQPLDS*
Ga0066660_115413151	3300006800	Soil	FTPVIVEWERGDFDDELVEVSHEQAERIVEYFRERWGPYGQAVDS*
Ga0079221_115751771	3300006804	Agricultural Soil	RLNKKLRDDFSWKSTPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS*
Ga0079220_100499813	3300006806	Agricultural Soil	RDDFSWKSTPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS*
Ga0075425_1031412831	3300006854	Populus Rhizosphere	FSWKSTPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS*
Ga0073928_103271333	3300006893	Iron-Sulfur Acid Spring	LRRDFSWQFTPAIAEWKRGDLSYDLVEVSHAQASKIIGYFRQKWGPFGQPVDS*
Ga0075424_1021294572	3300006904	Populus Rhizosphere	RRNPQAKELNNKLRDDFSWKSTPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS*
Ga0099829_107157181	3300009038	Vadose Zone Soil	DFSWAFTPAIVEWKHGDFADELVEISHEQAERIVQYFRERWGPYGQSADF*
Ga0116221_14064532	3300009523	Peatlands Soil	GDFSNELVQVSHEQASKIIEHFRQHWGSHGQPVDS*
Ga0116138_11467111	3300009552	Peatland	VIIEWERGDFDDELVGVSHKHASKIIEYFRHQWGPSGQRLDS*
Ga0116135_14256402	3300009665	Peatland	RDDFSWSFTPVILEWERGDFADELVEVSHERADKIIQHFRGHWGG*
Ga0126372_106136441	3300010360	Tropical Forest Soil	TPAIAEWEHGDFTYDLVEVSHAQASKIIERFRGKWGPYGQPVDS*
Ga0126378_101599212	3300010361	Tropical Forest Soil	DFDDELVEVSHAQASKIIEYFREKWGPYGQPVEP*
Ga0136449_1020649404	3300010379	Peatlands Soil	PLIVEWERGDFEDELVEVSHEQASKIIEYFWQKWGPHGQPLDS*
Ga0136449_1034222613	3300010379	Peatlands Soil	TRAIVEWEHGSYDEDLVEVSHEQASKIIEYFREQWGPFGQPLDP*
Ga0126361_105876942	3300010876	Boreal Forest Soil	LEHDDGPSDEALRDDFSWKFTPVIAEWERGDFDDELVEVSHEQADEIIQHFRDHWGGRPVDS*
Ga0126361_105893752	3300010876	Boreal Forest Soil	LEHDDGPSDEALRDDFSWKFTPVIAEWERGDFDDELVEVSHEQADKIIQHFRDHWGGRPADS*
Ga0126350_114518032	3300010880	Boreal Forest Soil	MEHGDFEDELVEISHEQVEKIIKYFRERWGPYGQPLDP*
Ga0137392_103840723	3300011269	Vadose Zone Soil	TPLIIEWERSNFGDELVEVSHAQASKIIEYFREKWGPFGQPVDS*
Ga0137365_100200862	3300012201	Vadose Zone Soil	MTTPVIAEWERGDFADELVEVSHEQAERIVQYFRERWRPHG*
Ga0137362_117389001	3300012205	Vadose Zone Soil	WEHGDFDDELVEVSHERASELIEYFRREWASLQRPSDR*
Ga0137380_103989232	3300012206	Vadose Zone Soil	LIVEWERGDFEDELVEVSHEQASRIVEYFRQKREPSGQPLDF*
Ga0137379_100356573	3300012209	Vadose Zone Soil	LIVEWERGDFEDELVEVSHEQASRIVEYFRQKWEPSGQPLDF*
Ga0137378_112806341	3300012210	Vadose Zone Soil	MTTPVIAEWERGDFADELVEVSHEQAEGIVQYFRERWGPHG*
Ga0137370_108934291	3300012285	Vadose Zone Soil	EALRRDFNWAFTPAIVEWEHGDYVYDLVEVSHEQASKIIEYFRSRWGPHGQPLDS*
Ga0137372_105862831	3300012350	Vadose Zone Soil	MTTPVIAEWERGDFADELVEVGHEQAERIVQYFRERWGPHG*
Ga0137386_100616143	3300012351	Vadose Zone Soil	FSWAFTPVIVEWKRGDFADELIEVSHQQAERIVQYFRERWRPRG*
Ga0137384_106129173	3300012357	Vadose Zone Soil	IVEWKHGDFADELVEISHEQAERIIQYFRERWGPYGQSADF*
Ga0137390_114510042	3300012363	Vadose Zone Soil	EWKHGDFDDELVEVSHAQASKIIERFRQKWGSFGQTVDS*
Ga0137373_100595233	3300012532	Vadose Zone Soil	MTTPVIAEWERGDFADELVEVSHQQAERIVQYFRERWRPRG*
Ga0137398_104622711	3300012683	Vadose Zone Soil	HGDLDDELVEVSHAQASKIIEYFRSRWGPFGQPVDF*
Ga0182034_117774832	3300016371	Soil	PSDEALRKDFSWMATPVIVEWERGDFADELVGVSHDQAERIIRYFRDRWGPHEQPADS
Ga0182034_117928472	3300016371	Soil	GLRKDFSWAYTPAIVEWERGDLGPELVEVSHEQASRIVEYFRQKWGPFGQPLNS
Ga0182040_104934324	3300016387	Soil	PVIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0182040_109934171	3300016387	Soil	RRLEHEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVSHEQASKIIGYFRHQWRPSGQPLDS
Ga0182040_112495052	3300016387	Soil	TPLITEWEHGDLEDELVEVSHEQAEKIIGYFRERWGPYGQPLDP
Ga0182039_109240571	3300016422	Soil	WERGDFDDELVEVSHEQASTIMGYLRHQWRPSGQPLDS
Ga0182039_117028501	3300016422	Soil	RRLEHEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVGHEQASKIIEYFRQKWGPHGQPLDS
Ga0187812_12903241	3300017821	Freshwater Sediment	LIVEWERGDFEDELVEVSHEQASKIIEYFRQKWGPHGQPLDS
Ga0187807_10370734	3300017926	Freshwater Sediment	PAIVEWKRGDLGQELVEVSHDQVERIIQYFRERWGPYGQPVDL
Ga0187809_100956512	3300017937	Freshwater Sediment	PAIVEWKHGDFADELVEVSHEQAERIIQYFRERWGPYGQ
Ga0187817_109775362	3300017955	Freshwater Sediment	KDFSWAHTPAIVEWERGDLGLELVEVSHEQASKIIEYFRQKWGPFGQPSDS
Ga0187778_100580564	3300017961	Tropical Peatland	PAIVEWERGDLGPELVEVSHEQASKIIEYFRQKWGPSGQPLDS
Ga0187776_107951311	3300017966	Tropical Peatland	TPAIVEWKQGDLGQELVEVSHEQAEKIIQYFRERWGPYGQPLDS
Ga0187783_103063951	3300017970	Tropical Peatland	KRGDFDDELVEVSHAQASKIIEYFREKWGPFGQPVDS
Ga0187783_105302813	3300017970	Tropical Peatland	HGDTEDELVEVSHEQVSKIIEYFRERWGPYGQPLDP
Ga0187783_105662981	3300017970	Tropical Peatland	PIIVEWQRSDFDDELVEVSHAQASKIIEYFREKWGPFGQPLDS
Ga0187783_111942451	3300017970	Tropical Peatland	FTPLIVEWERSNFSYELVEVSHAQASKIIEYFREKWGPFGQPVDS
Ga0187781_100132651	3300017972	Tropical Peatland	DEVLRKDLSWKFTPVIVEWERGDFADELVEVDHEQASKIIEGFRRKWGPHGQPLDS
Ga0187781_110770863	3300017972	Tropical Peatland	HGDFADELVEVSHEQVEKIIQYFRERWGPFGQPLDS
Ga0187782_100484424	3300017975	Tropical Peatland	RLEHDDGPSDEALRKDFSWKFTPLIVEWERGDFEDELVEVDHEQASKIVEYFRERWGLYGQPLES
Ga0187861_100928781	3300018020	Peatland	SWKFTPAIAEWEHGDFAYDLVEVSHAQASKIIEHFRELWGPFGQPLDS
Ga0187867_102021312	3300018033	Peatland	IEWERGDFGDELVEVSHEQASKIIEYFRERWGASGGA
Ga0187871_100443425	3300018042	Peatland	VIIEWERGDFDDELVGVSHKHASKIIEYFRHQWGPSGQRLDS
Ga0187765_108154171	3300018060	Tropical Peatland	EDGPSDEALRDDFSWKVTPVIVEWERGDFDDELVEVSHEQSSKIVEYFRHQWGPSGQPLD
Ga0187772_100381511	3300018085	Tropical Peatland	PAIVEWERGDLGPELVEVSHEQASKIIEYFRRKWGPQGQPRDC
Ga0187769_101618421	3300018086	Tropical Peatland	TPVIVEWERGDFDDELVEVSHKQASKIIEYFRRQWGLSGQPLDS
Ga0187769_102244913	3300018086	Tropical Peatland	VEWERGDLGPELVEVSHEQASKIIEYFRQKWGPSGQPLDS
Ga0210408_101868733	3300021178	Soil	EHDDGPSDEALRKDFSWKFTPLIVEWERGDFEDELVEVSHEQASKIIEYFRSRWGPHGQPLDS
Ga0213881_100071135	3300021374	Exposed Rock	PVIVEWERGDFDDELVEVSHEQSSKIIEYFRHQWGPSGQPLDS
Ga0213875_100727161	3300021388	Plant Roots	EGLRKDFSWAHTPAIVEWERGDLGPELVEVSHEQASKIIEYFRQKWGPSGQPLDS
Ga0126371_107211931	3300021560	Tropical Forest Soil	PVIVEWERGDFDDELVEVSHEQASKIIEYFRHQWGPSGQPLDS
Ga0207684_104288742	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RQDFSWSFTPIIVEWERSNFDDELVRVSHAQASKIIEYFRGKWGPYGQPVDS
Ga0207684_104462482	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VIAEWEHGDFANELVEVSHEQAERIIRYFRDRWGPYGQPADS
Ga0207684_114830601	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGPFG
Ga0207665_100059001	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LRKDFSWAFSPAIVEWEHGDLDDELVEVSHEQASKIIEYFRSRWGPHGQPLDS
Ga0207702_121507951	3300026078	Corn Rhizosphere	RKDFSWAFTPVIVEWKRGDFADELVEVGHEQAERIVQYFRERWRPHG
Ga0209421_11262412	3300027432	Forest Soil	EWERGDFEDELVVVSHAQASKIIEYFRERWGPYGQPVDF
Ga0208199_10204801	3300027497	Peatlands Soil	EFERGEFTYDLVQVSHAQASKIIEYFREQWGPFGQPLDS
Ga0208044_10119631	3300027625	Peatlands Soil	AIVEWKRGDLSYELVEVSHAQASKIIEYFREQWGPFGQPLDS
Ga0208827_10189431	3300027641	Peatlands Soil	GDFDDQLVEVSHAQASKIIEYFREQWGPFGQPLDS
Ga0209178_13845191	3300027725	Agricultural Soil	RLNKKLRDDFSWKSTPVIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS
Ga0209073_100054593	3300027765	Agricultural Soil	VIVEWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS
Ga0209112_101618631	3300027817	Forest Soil	RRDLSWKFTPLIVEWERGDLGEELIEVSHQKAETLIQSFRERWA
Ga0209624_107287931	3300027895	Forest Soil	KFTPAIVEWKRGDLSYELVEVSHAQASKIIEYFREEWGPFGQPVDS
Ga0209526_106146151	3300028047	Forest Soil	VIIEWERGDFDDELVGVSHKHASKIIEYFRSRWGPYGQPLDS
Ga0308309_103259573	3300028906	Soil	EGLRKDFSWDFTPLIVEWERGDFGQELIEVSHEQASKIIEYFRSRWGPHGQPLDS
Ga0311370_105307091	3300030503	Palsa	WKRSDFDDDLVEVSHAQASEIIEYFRGEWGPFGQPLDS
Ga0302324_1025767631	3300031236	Palsa	LIVEWERGDFEDELVEVSHEQASKIIEYFRVKWNP
Ga0318534_102625022	3300031544	Soil	VITEWERGDFADELVEVSHEQAERIVQYFRERWGPPG
Ga0318541_107505101	3300031545	Soil	VRRLEHEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVSHEQASKIIGYFRHQWRPSGQPLDS
Ga0318538_103931982	3300031546	Soil	VITEWERGDFADELVEVSHEQAERIVQYFRERWGPPGQPAAS
Ga0318573_106864473	3300031564	Soil	VEWERGDFDDELVGVGHEQASKIIEYFRQKWGSHGQPLDS
Ga0318515_101078151	3300031572	Soil	PVIVQWERGDFDDELVEVGHEQADTIIQYFREHWGGQQVDS
Ga0318542_105157431	3300031668	Soil	IAEWEHGDFAYDLVEVSHEQASKIIEYFREKWGPFGQPLDP
Ga0318561_107157471	3300031679	Soil	TPVIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0310686_1001009701	3300031708	Soil	GDFEDELVEVSHEQAEKIIQYFRERWGRSGQPLDS
Ga0310686_1102632381	3300031708	Soil	EWKHGNLGQELIEVGHEQASKIVEYFRERWGPYGQPLDS
Ga0306917_115811582	3300031719	Soil	EALRDDFSWKATPVIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0318493_107971312	3300031723	Soil	PVIVEWKHGDFADELVEVSHEQAERIIQYFRERWGPHGQSADF
Ga0318501_102445514	3300031736	Soil	ATPVIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0306918_105218973	3300031744	Soil	RKDFSWAHTPAIVEWERGDLGPELVEVSHEQASKIIEYFRQTWGPHGQPLDS
Ga0306918_114026852	3300031744	Soil	KDFSWAYTPAIVEWERGDLGPELVEVSHEQASRIVEYFRQKWGPFGQPLNS
Ga0318502_104032391	3300031747	Soil	DGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVGHEQASKIIEYFRQKWGSHGQPLDS
Ga0318492_106353912	3300031748	Soil	RDDFSWKSTPVIVEWERGDFDDELVEVSHEQASKIIGYFRHQWRPSGQPLDS
Ga0318494_101143211	3300031751	Soil	SDEALRDDFSWKATPVIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0318494_104003891	3300031751	Soil	VRRLEHEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVGHEQASKIIEYFRQKWGSHGQPFGS
Ga0318521_105339201	3300031770	Soil	PVIVEWKHGDFADELVEVSHEQAERIIQYFRERWGPHGQSAGF
Ga0318521_107532902	3300031770	Soil	DFSWKSTPVIVEWERGDFDDELVEVSHEQASKIIGYFRHQWRPSGQPLDS
Ga0318498_101923214	3300031778	Soil	AYTTAIVEWERGDLGPELVEVSHEQASRIVEYFRQKWGPFGQPLNS
Ga0318547_104819763	3300031781	Soil	AYTPAIVEWERGDLGPELVEVSHEQASRIVEYFRQKWGPFGQPLNS
Ga0318547_109902721	3300031781	Soil	LVRRLEHEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVGVGHEQASKIIEYFRQKWGSHGQPLDS
Ga0318529_105235441	3300031792	Soil	AFTPVIVEWKHGDFADELLEVSHEQASKIIEYFRQKWGPHGQPLDSICP
Ga0318576_102774932	3300031796	Soil	PADEVLRVDLSWKLTPVIVQWERGDFDDELVEVGHEQADTIIQYFREHWGGQQVDS
Ga0318567_101525803	3300031821	Soil	IVEWKHGDFADELVEVSHEQAERIIQYFRERWGPHGQSAGF
Ga0318499_102151832	3300031832	Soil	VIVEWERGDFDDELVEVSHEQASKIIGYFRHQWRPSGQPLDS
Ga0310917_109303773	3300031833	Soil	DEALRDDFSWKSTPVIVEWERGDFDDELVEVGHEQASKIIEYFRQKWGSHGQPLDS
Ga0318517_103694771	3300031835	Soil	LIAEWEHGDFEDELVEVTHDQVERIIQYFRERWGPFGQPLDL
Ga0318495_104046311	3300031860	Soil	SFTPIIVEWERSDFDDELVEVSHEQASKIIEYFREKWGPYGQPLDP
Ga0318536_103791771	3300031893	Soil	RGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0318522_103111961	3300031894	Soil	VLRDDFSWKSTPVIVEWERGDFDDELVGVGHEQASKIIEYFRQKWGSHGQPLDS
Ga0318520_103450562	3300031897	Soil	RVDLSWKLTPVIVQWERGDFDDELVEVGHEQADTIIQYFREHWGGQQVDS
Ga0306921_104756455	3300031912	Soil	VIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0306921_120534871	3300031912	Soil	KSTPVIVEWERGDFDDELVGVGHEQASKIIEYFRQKWGSHGQPLDS
Ga0306926_101461991	3300031954	Soil	AIVEWKHGDFADELVEVSHEQAERIIQYFRERWGPHGQSAGF
Ga0306926_119240951	3300031954	Soil	RDDFSWKATPVIVEWERGDFDDELVEVSHEQASKIIEYFRQKWGLSGQLLDS
Ga0306926_123810711	3300031954	Soil	PVITEWERGDFADELVEVSHEQAERIVQYFRERWGPPGQPAAS
Ga0306922_101631223	3300032001	Soil	KFTPLIAEWEHGDLEDELVEVSHEQAEKIIGYFRERWGPYGQPLDP
Ga0318563_102412872	3300032009	Soil	VITEWERGDFADELVEVSHEQAERIIQYFRERWGPPG
Ga0318558_102156193	3300032044	Soil	GDFDDELVEVGHEQASKIIEYFRQKWGSHGQPFGS
Ga0318505_104236981	3300032060	Soil	DFSWAFSPAIVEWKHGDLGQELVEVSHEQAEKIIQYFRERWGPYGQPLDL
Ga0318553_107416442	3300032068	Soil	AHTPAIVEWERGDLGPELVEVSHEQASKIIEYFRQKWGPHGQPLDS
Ga0306924_119595463	3300032076	Soil	KATPVIVEWERGDFDDELVEVSHEQASKIIEYFRQKWGLSGQLLDS
Ga0318518_102639604	3300032090	Soil	ALRDDFSWKATPVIVEWERGDFDDELVEVSHEQASKIIEHFRQKWRPSGQPLEF
Ga0318577_106453402	3300032091	Soil	HEDGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVSHEQASKIIGYFRHQWRPSGQPLDS
Ga0318540_101375772	3300032094	Soil	RKDFSWKFTPVIVEWERGDFADELVEVSHEQADKIIQYFREHWGGQQVDS
Ga0311301_101639804	3300032160	Peatlands Soil	RRDFSWQFTPAISAWHRGDLSYELVEVSHAQASRIIEYFREQWGPFGQPLDS
Ga0311301_114852231	3300032160	Peatlands Soil	ERGDFADELVEVSHEQASKIIEYFREQWGPFGQPLDS
Ga0306920_1040831332	3300032261	Soil	STPVIVEWERGDFDDELVEVGHEQASKIIEYFRQKWGSHGQPFGS
Ga0335085_112791781	3300032770	Soil	WKRGDFADELVEVSHEQAEKIIGYFREQWGPYGQSLDL
Ga0335078_111255461	3300032805	Soil	KRGDLSYELVEVSHAQASKIIEYFREKWGPFGQPLDP
Ga0335070_106439562	3300032829	Soil	GDFADDLVEVSHEQAERIIQYFRERWGPHGQSADL
Ga0335081_109931383	3300032892	Soil	LIAEWERGDFEDELVEVRHEQASKIIEYFRQKWGPRGQPLDS
Ga0335074_102602662	3300032895	Soil	VRTELLPRRFSWKFTPVVVAWEHGNFDDELIEVSHGQASKIIEYFRERWGPLGQSLDS
Ga0335074_114704161	3300032895	Soil	TPVIAEWERGDFDDELVEVSHGRASELIEYFRREWGPSDR
Ga0335075_116173391	3300032896	Soil	GGRKQELVEVSHAQATKIIEFFRTQWGSYWEPLDP
Ga0335083_101958071	3300032954	Soil	IVEWKHGDFADELVEVSHEQAERIVQYFRERWGPHGEPADS
Ga0335077_105458114	3300033158	Soil	DGPSDEALRDDFSWKSTPVIVEWERGDFDDELVEVSHEQASKIIEYFRHQWGPSGQSLDL
Ga0310914_114479661	3300033289	Soil	WKHGDFADELVEVSHEQAERIIQYFRERWGPHGQSADF
Ga0310811_113247211	3300033475	Soil	EWERGDFDDELVGVSHEQASKIIEYFRQKWGSHGQPLDS
Ga0370514_041241_3_179	3300034199	Untreated Peat Soil	DGPSDEALRDDFSWKFTPVIVEWERGDFDDELVEVSHEQADKVIQYFREHWGGQPVDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences