Metagenome / Metatranscriptome Family F047888

Basic Information
Family ID	F047888
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	67 residues
Representative Sequence	MGKLPKSLAGRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHHLWIPHFGRMRDVPIEQLDAIAE
Number of Associated Samples	131
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.26 %
% of genes near scaffold ends (potentially truncated)	99.33 %
% of genes from short scaffolds (< 2000 bps)	88.59 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.792 % of family members)
Environment Ontology (ENVO)	Unclassified (27.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.047 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120. 1JGI1027J11758_126123333 2JGIcombinedJ26739_1013502272 3Ga0062384_1008690981 4Ga0062389_1039515122 5Ga0066396_100177403 6Ga0066388_1043643432 7Ga0070711_1007268232 8Ga0070730_103613861 9Ga0070763_104876302 10Ga0075028_1007310852 11Ga0075029_1007081871 12Ga0075017_1006930342 13Ga0075030_1014590731 14Ga0075018_102646791 15Ga0075018_103356452 16Ga0075014_1007356301 17Ga0070712_1018708551 18Ga0075435_1008709332 19Ga0099830_106986721 20Ga0099792_111771201 21Ga0116222_10301141 22Ga0131092_107994722 23Ga0074046_100056247 24Ga0074046_100095501 25Ga0074046_106882912 26Ga0074045_110679451 27Ga0126370_119588121 28Ga0126381_1042258002 29Ga0137363_106924393 30Ga0137360_109415751 31Ga0134044_12554271 32Ga0137398_103532081 33Ga0137359_100327391 34Ga0137413_118469561 35Ga0181518_106188781 36Ga0181535_102188043 37Ga0182041_114887641 38Ga0182035_109463902 39Ga0182032_114649541 40Ga0182040_106552212 41Ga0182037_105762073 42Ga0182039_116614651 43Ga0182038_113362541 44Ga0182038_116354632 45Ga0181505_109258212 46Ga0187802_100450591 47Ga0187802_104585321 48Ga0187818_102821142 49Ga0187806_11403461 50Ga0187877_13651592 51Ga0187814_102608831 52Ga0187814_102807172 53Ga0187803_100078191 54Ga0187803_100863963 55Ga0187775_104970451 56Ga0187808_102950472 57Ga0187785_106245141 58Ga0187817_100620994 59Ga0187779_113655791 60Ga0187777_103846671 61Ga0187777_110836711 62Ga0187777_111012572 63Ga0187816_100128331 64Ga0187804_100957183 65Ga0187804_101116201 66Ga0187874_103251951 67Ga0187784_105604881 68Ga0187772_111240352 69Ga0187769_102606483 70Ga0187769_103279171 71Ga0187769_110963472 72Ga0187770_117714301 73Ga0187770_118085792 74Ga0182028_12221292 75Ga0210407_112418251 76Ga0210399_104235723 77Ga0210401_100852974 78Ga0210405_101551403 79Ga0210405_111671351 80Ga0210408_102468681 81Ga0210408_103521483 82Ga0210396_102049611 83Ga0210387_105125213 84Ga0210383_100250441 85Ga0210394_111432952 86Ga0210391_108880142 87Ga0213878_103669651 88Ga0210402_109897611 89Ga0210410_100554994 90Ga0210410_114623791 91Ga0126371_108644121 92Ga0247691_10062361 93Ga0247679_10836822 94Ga0208478_10654431 95Ga0208686_11262551 96Ga0209377_10403783 97Ga0209648_104918551 98Ga0207764_1245991 99Ga0207724_10174582 100Ga0207724_10198562 101Ga0207837_10226001 102Ga0207741_10149351 103Ga0207852_10218262 104Ga0207817_10130273 105Ga0207740_10286502 106Ga0208724_10366801 107Ga0208994_10447642 108Ga0209332_10859562 109Ga0209523_10751891 110Ga0209525_11392351 111Ga0208827_12066082 112Ga0207826_11755932 113Ga0209772_100154321 114Ga0209039_100172391 115Ga0209465_100324903 116Ga0209068_102465193 117Ga0265334_103524141 118Ga0316363_101028751 119Ga0170824_1224483101 120Ga0265330_104901422 121Ga0318538_103796632 122Ga0310915_100581283 123Ga0307474_111324631 124Ga0306917_111178292 125Ga0307469_107255563 126Ga0306918_108081021 127Ga0318502_105289852 128Ga0318554_104082581 129Ga0307478_113218031 130Ga0310917_103831543 131Ga0318544_102864092 132Ga0306923_108700743 133Ga0306923_124935021 134Ga0306921_100575211 135Ga0306926_116438611 136Ga0318532_102739422 137Ga0318533_103729491 138Ga0318524_103924062 139Ga0306924_112693072 140Ga0307472_1002321131 141Ga0335079_110346392 142Ga0335078_117420141 143Ga0335081_116603821 144Ga0310914_104157751 145Ga0318519_106372372 146Ga0326727_109221711 147Ga0326726_114111442 148Ga0371489_0471616_416_559 149Ga0326724_0380710_591_755
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120. 1JGI1027J11758_126123333 2JGIcombinedJ26739_1013502272 3Ga0062384_1008690981 4Ga0066396_100177403 5Ga0066388_1043643432 6Ga0075028_1007310852 7Ga0075017_1006930342 8Ga0075030_1014590731 9Ga0075018_102646791 10Ga0075018_103356452 11Ga0075014_1007356301 12Ga0116222_10301141 13Ga0131092_107994722 14Ga0074046_100056247 15Ga0126381_1042258002 16Ga0134044_12554271 17Ga0181535_102188043 18Ga0182041_114887641 19Ga0182038_116354632 20Ga0187802_100450591 21Ga0187808_102950472 22Ga0187777_111012572 23Ga0187804_101116201 24Ga0209772_100154321 25Ga0209465_100324903 26Ga0265334_103524141 27Ga0306923_124935021 28Ga0318532_102739422
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0170824_1224483101 2Ga0062389_1039515122 3Ga0066396_100177403 4Ga0075029_1007081871 5Ga0075017_1006930342 6Ga0075030_1014590731 7Ga0075435_1008709332 8Ga0131092_107994722 9Ga0074046_106882912 10Ga0134044_12554271 11Ga0182032_114649541 12Ga0187808_102950472 13Ga0187817_100620994 14Ga0187777_103846671 15Ga0187804_101116201 16Ga0187874_103251951 17Ga0187784_105604881 18Ga0187769_102606483 19Ga0182028_12221292 20Ga0210407_112418251 21Ga0210383_100250441 22Ga0213878_103669651 23Ga0210402_109897611 24Ga0126371_108644121 25Ga0207724_10174582 26Ga0207837_10226001 27Ga0209772_100154321 28Ga0209465_100324903 29Ga0209068_102465193 30Ga0335079_110346392 31Ga0335078_117420141 32Ga0335081_116603821 33Ga0318519_106372372
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.91% β-sheet: 0.00% Coil/Unstructured: 68.09%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF13620	CarboxypepD_reg	5.37
PF16927	HisKA_7TM	0.67
PF01609	DDE_Tnp_1	0.67
PF13180	PDZ_2	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.67
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.67
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.67
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.67
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.67
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.67

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.49 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.04 %
Unclassified	root	N/A	0.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.70 %
Unclassified	root	N/A	0.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12612333	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300002245\|JGIcombinedJ26739_101350227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	605	Open in IMG/M
3300004082\|Ga0062384_100869098	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300004092\|Ga0062389_103951512	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300004267\|Ga0066396_10017740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	930	Open in IMG/M
3300005332\|Ga0066388_104364343	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005439\|Ga0070711_100726823	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005537\|Ga0070730_10361386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	944	Open in IMG/M
3300005610\|Ga0070763_10487630	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300006050\|Ga0075028_100731085	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.67%
Environmental	Environmental	97.32%
Host-Associated	Host-Associated	2.01%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	20.81%
Plants	Host-Associated → Plants	2.01%
Terrestrial	Environmental → Terrestrial	76.51%
Wastewater	Engineered → Wastewater	0.67%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.67%
Freshwater	Environmental → Aquatic → Freshwater	15.44%
Peat	Environmental → Terrestrial → Peat	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.01%
Sediment	Environmental → Aquatic → Sediment	5.37%
Soil	Environmental → Terrestrial → Soil	73.83%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	14.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.67%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.09%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.01%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.67%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.07%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.01%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.37%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M

Showing 1 to 10 of 131 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_126123333	3300000789	Soil	MLKGMARLPKSLASRTLGRFLRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVPVERLDAIAE
JGIcombinedJ26739_1013502272	3300002245	Forest Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAGRLIQNAQRIALAQGAGFG
Ga0062384_1008690981	3300004082	Bog Forest Soil	MAKLPKSRIANSMAGKAVGKFLRFGVLRGLRSVEIDPEEFRRNLAEKHGLWVPHFGRMKDAPMEKLDAIAERLIHDAQRLAMAQGA
Ga0062389_1039515122	3300004092	Bog Forest Soil	MLEAMAKLPKSRIANSMAGKAVGKFLRFGVLRGLRSVEIDPEEFRRNLAEKHGLWVPHFGRMKDAPMEKLDAIAERLIHDAQRLAMAQGA
Ga0066396_100177403	3300004267	Tropical Forest Soil	MGKLPKSLARRVLRYGVLRGLRSVEIEPEEFRRHLADRHNLWIPHFGRMRDVPIEQLDAIAERLIHD
Ga0066388_1043643432	3300005332	Tropical Forest Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEDFRRHLADRHNLWIPHFGRMRDV
Ga0070711_1007268232	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLNGMARLPKSLASRTLGRFLRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVPVERLDAIAERLIHDSQ
Ga0070730_103613861	3300005537	Surface Soil	MGKLPKSLARRTVGRFLRFGMLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNA
Ga0070763_104876302	3300005610	Soil	MARLPKSLAGRTIGRFFRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVPVERLDAIAERLI
Ga0075028_1007310852	3300006050	Watersheds	MGRLPKSLAGRTVGRFLRFGMLRGLRSVEIDPAEFRKYLADKHDLWVPNFT
Ga0075029_1007081871	3300006052	Watersheds	MGKLPKSLARRTVGRFLRFGMLRGMRTVEIDPADFRQYLADKHHLWIPNFGRMRDVPI
Ga0075017_1006930342	3300006059	Watersheds	MAKLPKTQSMAGRAAGRLFRFGVLRGLRSVEIDPEEFRQSLAEKHGLWVPHFG
Ga0075030_1014590731	3300006162	Watersheds	MARIHKSLAGRTLGRFVRFGMLRGLRSVEIDPEEFRRSLADKHGLWVPHFGRMRDVPLE
Ga0075018_102646791	3300006172	Watersheds	MARLPKSLAGRTVGRFMRFGMLRGLRSVEIDPEDFRKYLSEKHGLWVPHFGRMKDVPVEKLDAIAARLMHDAQRLALA
Ga0075018_103356452	3300006172	Watersheds	MAGSQKSAVGHSFGKLLRFGMLRGLRSVEINPEDFRQQLSDKYDLW
Ga0075014_1007356301	3300006174	Watersheds	MTPDLTSPNRRRMLKVMARLPKSLASRTIGRFLRFGMARGLRSVEINADDFRKYLSEKHGLWVPH
Ga0070712_1018708551	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MARLPKSLASRTLGRFLRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVPVERLDAIAERLIHDSQ
Ga0075435_1008709332	3300007076	Populus Rhizosphere	MARLPKSLASRTLGRFLRFGMLRGLRTVEINADDFRKYLSDRHGLWVPHFGRMRDVPVERLDA
Ga0099830_106986721	3300009088	Vadose Zone Soil	MLKAMGKLPKSLATRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAEKLIHNAQRI
Ga0099792_111771201	3300009143	Vadose Zone Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRIALAQGA
Ga0116222_10301141	3300009521	Peatlands Soil	MAKLHKSMAGRAVGRFLRFGVLRGLRSVEIDPEDFRRNLAEKHGLWVPHFGRMKDAPMEKLDAIA
Ga0131092_107994722	3300009870	Activated Sludge	MLERMARLRKSVAGTAVGRFLRFGMLRGLRSVEIDPEDFRKHLAEKHGLWVPHFGRMKDVPIDKLDAIAERMIHDS
Ga0074046_100056247	3300010339	Bog Forest Soil	MLKPMAGLPKSLAGRTFGRFLRFGMLRGLRSVEINPEDFRKYLSQKHQLWVPH
Ga0074046_100095501	3300010339	Bog Forest Soil	MARLPKSLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPH
Ga0074046_106882912	3300010339	Bog Forest Soil	MLNGMTRLPNSLAGRTIGRFLRFGMLRGLRSVEINADDFRKYLSNKHGLWVPHFGRMRDVPVERLDAIAERLI
Ga0074045_110679451	3300010341	Bog Forest Soil	MLNSMARLPKSLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHEL
Ga0126370_119588121	3300010358	Tropical Forest Soil	MLKAMAKLPKSLAGRAVGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPNLGRMRDVPLDKLDAIANRMIHDAQR
Ga0126381_1042258002	3300010376	Tropical Forest Soil	MLDAMEKLPKSLAGRAVGRFLKFGVLRGMRTVEIDPEHFRQHLAKKHGLWVPHFG
Ga0137363_106924393	3300012202	Vadose Zone Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQR
Ga0137360_109415751	3300012361	Vadose Zone Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRIALAQ
Ga0134044_12554271	3300012395	Grasslands Soil	KRFLRFGVLRGLRSVEIDPEHFRRTLADKHGLWVPDFGRMKDVPTERLDVIAATLIRDAERLALAEGAPLALAA*
Ga0137398_103532081	3300012683	Vadose Zone Soil	MGKLPKSLASRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMR
Ga0137359_100327391	3300012923	Vadose Zone Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLD
Ga0137413_118469561	3300012924	Vadose Zone Soil	MGKLPKSLARRTVGRFLRFGVLRGLHSVELDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRIALAQGAGFG
Ga0181518_106188781	3300014156	Bog	MLKPMARLPKWLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPH
Ga0181535_102188043	3300014199	Bog	MARLPKSIAGKTLGKFVRFGMLRGLRSVEIDPEDFRKYLSQKHSLWIPHFGRMKDVPMDKLDAIAERL
Ga0182041_114887641	3300016294	Soil	MSMGKLPKSSLPSRAVGRFLRFGLLRGLRSVEIDPEEFRQYLANRHNLWIPHFGRMRDVPIEQLDAI
Ga0182035_109463902	3300016341	Soil	MAMGKLPKSLARRVLRYGVLRGLRSVEIDPEEFRRHLADKHNLWIPHFGRMRDVPI
Ga0182032_114649541	3300016357	Soil	MSMGKLPKSSLPSRAMGRFLRFGLLRGLRSVEIDPEEFRQYLANRHNLWIPHFGRMRDVPIEQLDAIAERLIQDAQRLAMAQG
Ga0182040_106552212	3300016387	Soil	MMGRSPRSLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWVPHFGRMRDVPVEKLDAIAERMIH
Ga0182037_105762073	3300016404	Soil	MGRSPRTLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWVPHFGRM
Ga0182039_116614651	3300016422	Soil	MSMGKLPKSSLPSRAVGRFLRFGLLRGLRSVEIDPEEFRQYLANRHNLWIPHFGRMRDVPIEQLDAIAQRLIQD
Ga0182038_113362541	3300016445	Soil	MLERMAKVRKSLAGRAVGKFLRFGVLRGLRSVEIDPEEFRRNLAEKHGLWVPHFGRMKDAPLEKLDAIAERLIHDAQRLAMAQGAG
Ga0182038_116354632	3300016445	Soil	MGRFLRFGLLRGLRSVEIDPEEFRQHLANRHNLWIPHFSRMR
Ga0181505_109258212	3300016750	Peatland	MAKLHKSMAGRAVGRFLRFGVLRGLRSVEIDPEDFRRNLAEKHGLWVPHFGRMKD
Ga0187802_100450591	3300017822	Freshwater Sediment	MAGRAVGRFLRFGMLRGLRSVEIDPEEFRRILAEKHGLWVPHFGRMKDAPLEKLDAIAERLIHDAQRLA
Ga0187802_104585321	3300017822	Freshwater Sediment	MEKLPKSLAGRTVGRFLKFGVLRGMRTVEIDPEEFRRHLAEKHGLWVPHFGRMKDVP
Ga0187818_102821142	3300017823	Freshwater Sediment	MARLPKSLAGRTFGRFLRFGVLRGLRSVEIDPEDFRKYLSQKHQLWVPHFGRMKDVPLDKLDAIAER
Ga0187806_11403461	3300017928	Freshwater Sediment	MATLPKSMAGRAVGRFLRFGVLRGLRSVEIDPEEFRRSLAEKHGLWVPHFG
Ga0187877_13651592	3300017931	Peatland	MARLPKSIAGKTLGKFVRFGMLRGLRSVEIDPEDFRKYLSQKHSLWIPHFGRMKDVPMDKLDAIAERLIHDAQRLALAQGA
Ga0187814_102608831	3300017932	Freshwater Sediment	MLDPMARLPKSMAGRAVGRFLRFGMLRGLRSVEIDPEEFRRNLAEKHGLWVPHFGRMKDAPLEKLDAIAERLIHDAQR
Ga0187814_102807172	3300017932	Freshwater Sediment	MAKLPKSLAGRAVGRFLRFGMLRGLRSVEIDPEEFRRNLAERHGLWVPHFGRMKDAPLEKLDAIAE
Ga0187803_100078191	3300017934	Freshwater Sediment	MARLPKSLAGRTFGRFLRFGVLRGLRSVEIDPEDFRKYLSQKHQLWVPHFGRMKDVPLDKLDAIAERLIHDAQRLALAQGAGFGL
Ga0187803_100863963	3300017934	Freshwater Sediment	MAKLPKSLAGRAVGRFLRFGMLRGLRSVEIDPEEFRRNLAERHGLGVPHFGR
Ga0187775_104970451	3300017939	Tropical Peatland	MAKLPNSLAGRTVGRFLRFGVLRGMRSVEIDPEAFRRHLAEKHGLWVPHFGRMKDVPLAKLDAIA
Ga0187808_102950472	3300017942	Freshwater Sediment	MLTSQKSLAGRAVGRFLRFGVLRGIRTVEIDPEDFRQHLAKKHGLWVPTFARMKDV
Ga0187785_106245141	3300017947	Tropical Peatland	MHMPRLRKSLAGRTVGRFLRFGMLRGLRSVEIDPEEFRKDLATKHGLWVPHFGRMKDVP
Ga0187817_100620994	3300017955	Freshwater Sediment	MEKLPKSLAGRTVGRFLKFGVLRGIRTVEIDSEEFRRHLAEKHGLWVPHFGRMKDVPVEKLDAIAERMIHDAQRLAM
Ga0187779_113655791	3300017959	Tropical Peatland	MAKSHKSLAGRAMGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPHFGRM
Ga0187777_103846671	3300017974	Tropical Peatland	MARLPKSLAGRAVRRFLRFGMLRGLRSVEIDPEEFRRTLAEKHGLWVPHFGRMKDAPLEKLDAIAERLIHDAQRLAMAQGAGF
Ga0187777_110836711	3300017974	Tropical Peatland	MPRLRKSLAGNVVGRFLRFGMLRGLRSVEIDPEDFRKHLAEKHGLWVPHFGRMKDVPIEKLDAIAERMIHDSQRLAMAQGAG
Ga0187777_111012572	3300017974	Tropical Peatland	MPRLRKSLAGRAVGRFLRFGMLRGMRSVEIDPEDFRKDLAQKHGLW
Ga0187816_100128331	3300017995	Freshwater Sediment	MEKLPKSLAGRTVGRFLKFGVLRGIRTVEIDPEQFRRHLAEKHGLWVPH
Ga0187804_100957183	3300018006	Freshwater Sediment	MARLPKSLAGKTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHQLWVP
Ga0187804_101116201	3300018006	Freshwater Sediment	MARSPKSFAGNTVGRVLRFGMLRGLRSVEIDPEEFRRTLAEKHGLWVPHFGRM
Ga0187874_103251951	3300018019	Peatland	MARLPKSIAGKTLGKFVRFGMLRGLRSVEIDPEDFRKYLSQKHSLWIPHFGRMKDVPMDKLDAIAERLIHDAQRLALAQGAG
Ga0187784_105604881	3300018062	Tropical Peatland	MARLPNSLAGRAFGRFLRFGMLRGMRTVEIDPEEFRRNLAEKHGLWVPHFGRMKDVPLEKLDAIAERMIHDAQRLAMAQGAGF
Ga0187772_111240352	3300018085	Tropical Peatland	VSRLPKSLAGRTLGRFVRFGMLRGLRSVEIDPEDFRKYLSQKHSLWVPHFGRMKDVPLDKLD
Ga0187769_102606483	3300018086	Tropical Peatland	MTKLPKSLAGRTVGRFLRFGVLRGMRTVEVDPEQFRRHLAEKHGLWVPHFGRMKDVPLEKLDAIAQRMIHDAQRLAMAQGAGF
Ga0187769_103279171	3300018086	Tropical Peatland	MKKLPKSLAGRTVGRFLKFGVLRGMRTVEIDPEEFRRQLAEKHGLWVPHFGRMKDVPVEKLDAIAQRMIHDAQRLAMAQGASFG
Ga0187769_110963472	3300018086	Tropical Peatland	MARSPKSLAGRTLGRFLRFGVLRGLRSVEIDPEDFRKYLSQKHELWVPHFGRMKDVPLEKLDAIADRLIHDAQRLALAQGAGFG
Ga0187770_117714301	3300018090	Tropical Peatland	MARLPKSPAGGTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPHFGRMKDVPLDKLDA
Ga0187770_118085792	3300018090	Tropical Peatland	MARLPKSPAGGAFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPHFGRMKDVPLDK
Ga0182028_12221292	3300019788	Fen	MARLPKSLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLAQKHQLWVPHFGRMKDVPLDKLDAIADRLIHDAQRLALAQGAGLAWVA
Ga0210407_112418251	3300020579	Soil	MARLPKSAKLPKSLAGRTVGRLLRFGMLRGLRSVEIDADDFRKYLSEKHGLWVPHFGRMRDVPMEKLDAIAERLIHDAQRLALA
Ga0210399_104235723	3300020581	Soil	MGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAEKLIHNA
Ga0210401_100852974	3300020583	Soil	MGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHNLWIPHFGRMRDVPI
Ga0210405_101551403	3300021171	Soil	MARLPKSLAGRTIGRFLRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVPVERLD
Ga0210405_111671351	3300021171	Soil	MLKAMGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHHLWIPHFGRMRDVPIEQLDAIAEKLIHNA
Ga0210408_102468681	3300021178	Soil	MARLPKSLASRTLGRFLRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVP
Ga0210408_103521483	3300021178	Soil	MGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHHLWIPHFGRMRDVPIEQLD
Ga0210396_102049611	3300021180	Soil	MGKLPKSLASRTVGRFLRFGMLRGLRTVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDA
Ga0210387_105125213	3300021405	Soil	MGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHNLWIPHFGRMRDV
Ga0210383_100250441	3300021407	Soil	MGRLPKSLASRTFGRFMRFGMLRGLRSVEIDPEDFRKYLSEKHGLWVPHFGRMKDVPVEKLDAIAARLMHD
Ga0210394_111432952	3300021420	Soil	MGKLPKSLGRRTVGRLLRFGVLRGLRSVEIDPEDFRQYLADKHNLWIPHFG
Ga0210391_108880142	3300021433	Soil	MGKLPKSLARRTVGRMLRFGVLRGLRSVEIDPDEFRQYLADKHNLWIPHFGRMRDVPIEQ
Ga0213878_103669651	3300021444	Bulk Soil	MLVSMPRLRKSLAGRVVGRFLRFGMARGLRSVEVDPEDFRKDLAEKHGLWVPHFGRMKDVPIETLDAIAQRM
Ga0210402_109897611	3300021478	Soil	MARLPKSVARRTVGKFLRFGVLRGLRTVEIDPDDFRTYLSEKHGLWIPHFGRMRDVPIEKLDAIAARLIHDAQRLAAAQGAGFG
Ga0210410_100554994	3300021479	Soil	MGKLPKSLAQRTVGRFLRFGMLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDV
Ga0210410_114623791	3300021479	Soil	MGKLPKSLARRTVGRFLRFGMLRGLRSVEIDPDEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAE
Ga0126371_108644121	3300021560	Tropical Forest Soil	MGKLPKSIARRTVGRFLRFGVLTGLRSVEIDPEEFRQYLADRHGLWIPHFGRMRDVPIEQIDAIANRLILD
Ga0247691_10062361	3300024222	Soil	MGKLPKSLASRTFGRFLRFGMLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRIALAQGAGFGL
Ga0247679_10836822	3300024251	Soil	MGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIANTLIQHAQ
Ga0208478_10654431	3300025475	Arctic Peat Soil	MARLPKSLASRTVGRFLRFGMLRGLRSVEIDADDFRKYLSDKHGLWVPNFGRMRDVPMEKLDSIAERLIHNA
Ga0208686_11262551	3300025500	Peatland	MARLPKWLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPHFGRMKDVPLDKLDAIAERLIH
Ga0209377_10403783	3300026334	Soil	MGKLPKSLANRTVGRFLRFGMLRGLRSVEVDPEEFRQYLADKHNLWIPHFGRMR
Ga0209648_104918551	3300026551	Grasslands Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRIA
Ga0207764_1245991	3300026839	Tropical Forest Soil	MGRSPKTLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWVPHFGRMRDVPIEKLDAIA
Ga0207724_10174582	3300026862	Tropical Forest Soil	MMGRSPKTLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWVPHFGRMRDVPIEKLDAIAERMIHDAQRLAMAQGAG
Ga0207724_10198562	3300026862	Tropical Forest Soil	MTMPRLRKSLAGRAVGRFVRFGMARGLRSVEIDPEDFRKDLAEKHGLWVPHFGRMKDVPIETLDAIAQRMIHDAQRLAMAQGA
Ga0207837_10226001	3300026876	Tropical Forest Soil	MARLPKSLAGRTVGRFLRFSMLRGLKSVEIDAEAFRKYLADKHGLWVPHFGRMRDVPLEKLDAIAERLIHNAQRLALA
Ga0207741_10149351	3300026941	Tropical Forest Soil	MMGRSPKTLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWVPHF
Ga0207852_10218262	3300026959	Tropical Forest Soil	MPRLRKSLAGRAVGRFLRFGMARGLRSVEVDPEDFRKDLAEKHGLWVPNFGRMKDV
Ga0207817_10130273	3300026979	Tropical Forest Soil	MGRSPQSLAGRTFGRFLRFGMLRGLRSVEIDPESFRRSLAEKHGLWVPHFGRMRDVP
Ga0207740_10286502	3300027011	Tropical Forest Soil	MMGRSPRTLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWVPHFGRMRDVPIEKLDAIAERMIHDAQRLAMAQGAG
Ga0208724_10366801	3300027064	Forest Soil	MGKLPKSLASRTVGRFLRFGMLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAEKLIHNAQRIALAQGAGF
Ga0208994_10447642	3300027164	Forest Soil	MGKLPKSLARRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDTIAERLIHNAQRIALAQGAG
Ga0209332_10859562	3300027439	Forest Soil	MLKPVGKLPKSLARRTVGRILRFGVLRGLRTVEIDPDEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRVALAQGAG
Ga0209523_10751891	3300027548	Forest Soil	MGKLPKSIASRTVGRFLRFGMLRGLRSVEIDPEDFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAERLIHNAQRVALAQGAGF
Ga0209525_11392351	3300027575	Forest Soil	MGKLPKSLAGRTVGRFLRFGMLRGLRSVEIDPEEFRQYLADKHNLWIPHFGRMRDVPIEQLDAIAQRLIQNAQRI
Ga0208827_12066082	3300027641	Peatlands Soil	MARLPKSLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHQLWIPHFGRMKDVPLDKLDAI
Ga0207826_11755932	3300027680	Tropical Forest Soil	MARLPKSLAGRTVGRFLRFSMLRGLKSVEIDAEAFRKYLADKHGLWVPHFGRMRDVPLEKLDAIAERLIHNAQRLALAQGA
Ga0209772_100154321	3300027768	Bog Forest Soil	MARLPKPGLPKLALPKARLRQSGKSLAGRSVGKLVRFGLLRGLRSVEIDPEEFRTYLSEKHGLWVPHLGRMRDVPIERLDAIAGRLIHDAQRL
Ga0209039_100172391	3300027825	Bog Forest Soil	MGKLPKSLASRTVGRFLRFGMLRGLRTVEIDPEEFRQYLADKHNLWIPHFDRMRDVPIEQLDAIAEQLIR
Ga0209465_100324903	3300027874	Tropical Forest Soil	MGRSPRSLAGRTFGRFLKFGMLRGLRSVEVDPERFRRTLAEKHGLWVPHFGRLRDVPIEKLDAIAERMIHDAARLAM
Ga0209068_102465193	3300027894	Watersheds	MGRLPKSLAGRTVGRFLRFGMLRGLRSVEIDPEEFRKYLSDKHDLWVPTFTRMRDVPLEKLDAIAARLMQD
Ga0265334_103524141	3300028573	Rhizosphere	MLNPMARSPKSLAGRTVGRFLRFGMLRGLRSVEVDADQFRKYLSEKHGLWVPHFGRMRD
Ga0316363_101028751	3300030659	Peatlands Soil	MARLPKSLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPHF
Ga0170824_1224483101	3300031231	Forest Soil	MGKLPKSLAGRTVGRFLRFGVLRGLRSVEIDPEEFRQYLADKHHLWIPHFGRMRDVPIEQLDAIAE
Ga0265330_104901422	3300031235	Rhizosphere	MARSPKSLAGRTVGRFLRFGMLRGLRSVEVDADQFRKYLSEKHGLWVPHFGRMRDVPIEKLDAIAERLIHDAQRLAL
Ga0318538_103796632	3300031546	Soil	MGRSPRSLAGRTFGRFLKFGMLRGLRSVEVDPERFRRTLAEKHGLWVPHFGRLRDVPIEKLDAIAERMIHDAARLAMA
Ga0310915_100581283	3300031573	Soil	MAKLPKSLAGRAVGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPNLGRMRDVPLDKLEA
Ga0307474_111324631	3300031718	Hardwood Forest Soil	MAKLPKSLAGRAVGRFLRFGMLRGLRSVEVDPEEFRRTLAEKHGLWVPHFGRMKDAPLE
Ga0306917_111178292	3300031719	Soil	MPRLRKSLAGRAVGRFLRFGMTRGLRTVEVDPEDFRKDLAQKHGLWVPHFGRMK
Ga0307469_107255563	3300031720	Hardwood Forest Soil	MGKLPKSLARRTVGRFLRFGMLRGLRSVEIDPDEFRQYLADKHNLWIP
Ga0306918_108081021	3300031744	Soil	MPRLRKSLAGRAVGRFLRFGMTRGLRTVEVDPEDFRKDLAQKHGLWVP
Ga0318502_105289852	3300031747	Soil	MGRSPRSLAGRTFGRFVRFGMLRGLRSVEVDPERFRRTLAEKHGLWVPHFGRLRDVPIEKLDAIA
Ga0318554_104082581	3300031765	Soil	MGRSPRSLAGRTFGRFLKFGMLRGLRSAEVDPERFRRTLAEKHGLWVPHFGRLRDVPIEKLDAIAERM
Ga0307478_113218031	3300031823	Hardwood Forest Soil	MGKLPKSLARRTVGRFLRFGMLRGLRSVEIDPDDFRQYLADKHNLWIPHFGRMRDVPI
Ga0310917_103831543	3300031833	Soil	MGRSPRSLAGRTFGRFLKFGMLRGLRSVEVDPERFRRTLAEKHGLWVPHFGRLRDVPIEKLDAIAERMIHDAARLAMAEG
Ga0318544_102864092	3300031880	Soil	MAKLPKSLAGRAVGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPNLGRMRDVPLDK
Ga0306923_108700743	3300031910	Soil	MGRSPKSLAGRTFGRFLRFGMLRGLRSVEIDPERFRRNLAEKHGLW
Ga0306923_124935021	3300031910	Soil	MGRSPRTLAGRTVGRFLRFGMLRGLRSVEIDPERFRRSLAEKHGLWV
Ga0306921_100575211	3300031912	Soil	MAKVRKSLAGRAVGKFLRFGVLRGLRSVEIDPEEFRRNLAEKHGLWVPHFGRMKDAPLEKLDAIAERLIHDAQRLAMAQGAGFGL
Ga0306926_116438611	3300031954	Soil	MARLRKSLAGRAVGRFLRFGMARGLRSVEVDPDDFRKDLAEKHGLWVPHFGRMKDVPIETLDAIAQ
Ga0318532_102739422	3300032051	Soil	MAKLPKSLAGRAVGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPNLGRMRDVPLDKLDAIANRMIHDAQR
Ga0318533_103729491	3300032059	Soil	MGRSPRSLAGRTFGRFLKFGMLRGLRSVEVDPERFRRTLAEKHGLWVPHFGRLRDVPIEKLDAIAERMIHDAAR
Ga0318524_103924062	3300032067	Soil	MAKLPKSLAGRAVGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPNLGRMRDVPLD
Ga0306924_112693072	3300032076	Soil	MARLPKSLAGRTLGRFLRFGMLRGLRTVEINADDFRKYLSDKHGLWVPHFGRMRDVPVERLDAIAERLIHDSQRL
Ga0307472_1002321131	3300032205	Hardwood Forest Soil	MARLPKSLASRTLGRFLRFGMLRGLRTVEINADDFRKYLSNKHGLWVPHFGRMRDVPVERLDAIAERLIH
Ga0335079_110346392	3300032783	Soil	MGKLPRSVARRTVGRFLRFGVLKGLRSVEIDPEEFRQQLADKHNLWIPHFGRMRDVPIEQIDAIAKRLISDAQ
Ga0335078_117420141	3300032805	Soil	MDTSQKSLAGRAVGRFLKFGVLRGMRTVEIDPEEFRQHLAKKHGLWVPHFGR
Ga0335081_116603821	3300032892	Soil	MLDRMAKLPKSLAGRTVGRFLRFGMLRGMRSVEIDPEAFRRYLAEKHGLWVPHFGRMKDVPLEK
Ga0310914_104157751	3300033289	Soil	MSMGKLPKSSLPSRAVGRFLRFGLLRGLRSVEIDPEEFRQYLANRHNLWIPHFGRMRDVP
Ga0318519_106372372	3300033290	Soil	MAKLPKSLAGRAVGRFLRFGMLRGMRTVEIDPEDFRRNLAEKHGLWVPNLGRMRDVPLDKLDAIANRMIHD
Ga0326727_109221711	3300033405	Peat Soil	MAKLPKSVAGRAVGKFLRFGVLRGLRSVEIDPEDFRRNLAEKHGLWVPHFGRMKDAPLEKLD
Ga0326726_114111442	3300033433	Peat Soil	MARLPKSLAGRTFGRFLRFGMLRGLRSVEIDPEDFRKYLSQKHELWVPHFGRMKDVPLDKLDAIAERLIHDAQRLALAQ
Ga0371489_0471616_416_559	3300033755	Peat Soil	MAGRAVGRFLRFGMLRGLRSVEIDPEEFRRTLAEKHGLWVPHFGRMKD
Ga0326724_0380710_591_755	3300034091	Peat Soil	MAKLAKSLAGRAVGRFLRFGMLRGLRSVEIDPEDFRRTLAEKHGLWVPHFGRMKD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047888

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences