NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F047699

Metagenome / Metatranscriptome Family F047699

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F047699
Family Type Metagenome / Metatranscriptome
Number of Sequences 149
Average Sequence Length 79 residues
Representative Sequence MAYRRTVLFALLAASALTPILFAQNRPQTPAPEAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKT
Number of Associated Samples 127
Number of Associated Scaffolds 149

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.64 %
% of genes near scaffold ends (potentially truncated) 97.32 %
% of genes from short scaffolds (< 2000 bps) 97.32 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.221 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(9.396 % of family members)
Environment Ontology (ENVO) Unclassified
(40.268 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.691 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166
12001381728
2ICChiseqgaiiDRAFT_24018491
3ICChiseqgaiiFebDRAFT_145339782
4JGI1027J12803_1048960001
5F14TB_1019096111
6soilL1_100919995
7Ga0063455_1002631041
8Ga0062592_1017862991
9Ga0066395_104283722
10Ga0066814_100934592
11Ga0066673_104553801
12Ga0066388_1013965911
13Ga0066388_1028763521
14Ga0066388_1054898261
15Ga0066388_1073447732
16Ga0070680_1006135632
17Ga0068868_1017087031
18Ga0070692_111723952
19Ga0070669_1004695141
20Ga0070675_1001896211
21Ga0070675_1006727162
22Ga0070674_1004749971
23Ga0070674_1015004641
24Ga0070688_1005059573
25Ga0070667_1023250402
26Ga0070700_1005438321
27Ga0066689_103778611
28Ga0070665_1008306611
29Ga0070704_1018668151
30Ga0066700_110527081
31Ga0070664_1007474262
32Ga0066703_103825211
33Ga0068857_1013692291
34Ga0068857_1022207762
35Ga0068866_107959872
36Ga0066903_1026977911
37Ga0066903_1041283303
38Ga0068863_1015491231
39Ga0068860_1020208322
40Ga0075417_104819232
41Ga0068871_1012522772
42Ga0079221_112009911
43Ga0075421_1002899134
44Ga0075421_1016957553
45Ga0075431_1005618013
46Ga0075425_1025070701
47Ga0075429_1002379971
48Ga0075435_1008269033
49Ga0111539_105754043
50Ga0111539_113118142
51Ga0111539_128700302
52Ga0114129_130261082
53Ga0105243_116937311
54Ga0111538_126976611
55Ga0111538_133630352
56Ga0075423_112533032
57Ga0105241_107024872
58Ga0105242_117309561
59Ga0105242_133042772
60Ga0126374_114078142
61Ga0126382_108194362
62Ga0126382_108211091
63Ga0126373_115167511
64Ga0134109_102006962
65Ga0126376_114268732
66Ga0126378_115593502
67Ga0126378_116014882
68Ga0134127_122333861
69Ga0134127_131546852
70Ga0134123_107377652
71Ga0134123_119885672
72Ga0137389_117112251
73Ga0137350_10989232
74Ga0137388_107278421
75Ga0137383_111658401
76Ga0137365_110343732
77Ga0137362_108797792
78Ga0137377_118028732
79Ga0150985_1153127952
80Ga0137370_103225013
81Ga0137387_113128501
82Ga0137372_102744083
83Ga0137360_108123991
84Ga0150984_1070275501
85Ga0137397_112383042
86Ga0157299_100847172
87Ga0137395_103168283
88Ga0137404_114060721
89Ga0164301_111298181
90Ga0126369_126769272
91Ga0126369_132039072
92Ga0134077_101807772
93Ga0164307_105649211
94Ga0157378_127692032
95Ga0157375_101754404
96Ga0157380_115563011
97Ga0157377_101840823
98Ga0157377_105724821
99Ga0132255_1005435341
100Ga0132255_1050844842
101Ga0182032_110020091
102Ga0182034_119462051
103Ga0184604_101762691
104Ga0184608_101924982
105Ga0190274_139545462
106Ga0210407_105283701
107Ga0210406_109802821
108Ga0222728_10606491
109Ga0242660_11233052
110Ga0242654_100162161
111Ga0207682_101321033
112Ga0207680_100880724
113Ga0207701_101466064
114Ga0207644_101432493
115Ga0207686_110178771
116Ga0207704_114482002
117Ga0207651_102416583
118Ga0207651_106970802
119Ga0207703_110614771
120Ga0207641_103040891
121Ga0207648_117342691
122Ga0207674_116007191
123Ga0207675_1009948581
124Ga0207683_100625271
125Ga0207698_107936791
126Ga0209376_12214972
127Ga0209999_10298191
128Ga0209011_11264961
129Ga0209380_104965241
130Ga0268265_105919021
131Ga0268264_109325392
132Ga0268264_115138262
133Ga0307312_101835521
134Ga0307308_101103761
135Ga0170824_1247593882
136Ga0308179_10260091
137Ga0170819_157010782
138Ga0310888_106487481
139Ga0307469_115113352
140Ga0307468_1002233703
141Ga0307468_1005474313
142Ga0310900_116226012
143Ga0306923_111382121
144Ga0306921_124496851
145Ga0310909_107374012
146Ga0310902_109014082
147Ga0310895_101266601
148Ga0315912_113933172
149Ga0310914_117891161
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 39.25%    β-sheet: 0.00%    Coil/Unstructured: 60.75%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MAYRRTVLFALLAASALTPILFAQNRPQTPAPEAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered RegionsSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
83.2%16.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
5.4%8.7%6.0%4.7%4.7%4.7%5.4%9.4%4.7%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
20013817282001200001SoilMAYRRTVLLAFLVASALTSIVFSQDTEQTPAPQTPPAKPQPFDPHDISGIWRNPGRFKSIIRNNRPPMTECGKGEVE
ICChiseqgaiiDRAFT_240184913300000033SoilMTYRRTALFALVAVLVLMQIVFAQNTPQRQAQTPSTANAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKGEVE*
ICChiseqgaiiFebDRAFT_1453397823300000363SoilMTYRRTALFALVAVLVLMQIVFAQNTPQRQAQTPSTANAQPFDPHDISGIWRNPGGFDPIIGTNRPPDDGMGKGEVE*
JGI1027J12803_10489600013300000955SoilMTYRRTVLFALLAASALTPILFSQNRQTQTPQAPQTPPAKAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTE
F14TB_10190961113300001431SoilMTYRRTALFALVAVSVLMQFVFAQNTPQRQAQTPSTANAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASARNT
soilL1_1009199953300003267Sugarcane Root And Bulk SoilMMYRHLRLRAIALALRCTALFALVAVSVLMPNLLAQRNQQNQAQTPSTAKAQPFDPRDISGIWKNPGGFDPIIGTNRPPMTEWGK
Ga0063455_10026310413300004153SoilMTYRRTVLFAFLTASAMTTILVAQNSQQTPAPQAPAAKPFDPHDISGIWKNPGGFDPIIGMNRPPMTEWGKEKWSKTRAS
Ga0062592_10178629913300004480SoilMTHRRKVLFALLAASALAPILFSQNRQATAPQAPPAKPQPFDPHDISGIWKNPGGFDVALGNERPPMTAWGKEKWSKTRAS
Ga0066395_1042837223300004633Tropical Forest SoilMTYRRTALLALVGALVLMQILFAQNAPRGQRGAQTASTPSNLPFDPHDISGIWKNPGGFDPIIGNNRPPMTEWGKEKWSKTRASARNTPLAF
Ga0066814_1009345923300005162SoilMTYRRTVLFVLLAALALTPLLFSQNRGRGQAPQAPPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASA
Ga0066673_1045538013300005175SoilMAYRRTVLFALLAASALTPILFAQNRQQTPAPQAPPAKAQPFDPHDISGIWRNPGGF
Ga0066388_10139659113300005332Tropical Forest SoilMTHRRTVLFVLLVVLAFASILLSQGRGRGQAAPAPPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWS
Ga0066388_10287635213300005332Tropical Forest SoilMTYRRTALLALVGVLVLMQILFAQNAPRGQRGTQTESTPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASARNTPLA
Ga0066388_10548982613300005332Tropical Forest SoilMTYRRTALFALVAVSALAQIFFAQNAPRGQRQAQTASTPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRA
Ga0066388_10734477323300005332Tropical Forest SoilMTYRRTVLFALLAVSALTPILFSQNRQTRAPQAPQAAPATPQPFDPHDISGIWRNPGGFDPIIGTNR
Ga0070680_10061356323300005336Corn RhizosphereMAYRRMALFAFLAASVLTAILIAQDGEQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRA
Ga0068868_10170870313300005338Miscanthus RhizosphereMIYRRTALFALLAVLALMQILFAQRGPQRGAPAPSTAASTLPFDPHDISGIWRNPGGFDPIIGMNRPPMTDW
Ga0070692_1117239523300005345Corn, Switchgrass And Miscanthus RhizosphereMRYRRTALFALVAVLVLMQMLFAQNRGQRQTTQAPPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRA
Ga0070669_10046951413300005353Switchgrass RhizosphereMTYRHSRLRAVALALRRTALFALVAVLVLVPNLFAQRGQRNQAPAPPSNLPFDPHDISGIWRNPGGFDPIVGTNRPPMTAWGKEQWSKTRASARNTPL
Ga0070675_10018962113300005354Miscanthus RhizosphereMTYRHLRLRAVALALRRTILCALLAASAFAPLLFSQAKVQDFDPHDISGIWKNPGGFDPILGNNRPPMTEWGKEKWSKTRASARIRRWPLVSTRTRRIGMILYSSATHPVTPATW
Ga0070675_10067271623300005354Miscanthus RhizosphereMTYRQSRLRAVALALRRTALFALVAVLVLVPNLFAQRGQRNQAPAPPSNLPFDPHDISGIWRNPGGFDPIVGTNRPPMTAWGKEQWSKTRASARNTPL
Ga0070674_10047499713300005356Miscanthus RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANPQPFDPHDISGIWRNPGGFDPIIGMNRP
Ga0070674_10150046413300005356Miscanthus RhizosphereMTYRRTVLFALIAASALTPILFSQNRQQTPAPQASPAKPQPFDPHDISGIWKNPGGFDPIIGTNRPPMTEWGKEKWSKTRASA
Ga0070688_10050595733300005365Switchgrass RhizosphereMTYRRTALFALVAVLLLTQMLFAQRGQRQTTQPPPSNLPFDPHDISGIWRNPGGFDPIVGMNRPPMTEWGKEK
Ga0070667_10232504023300005367Switchgrass RhizosphereMVLFALMAASALAPILFSQNRGQTPAPQASPARALPFDPRDISGIWKNPGGFDPIIGTTRPPMTEWGKEKWSKT
Ga0070700_10054383213300005441Corn, Switchgrass And Miscanthus RhizosphereMIYRRTALFALLAVLALMQILFAQRGPQRGAPAPSTAASTLPFDPHDISGIWRNPGGFDPIIGMNRPPMTDWGKEQWSKTRASARNT
Ga0066689_1037786113300005447SoilMTYRRQALVALVAVLALGQILFAQRNQQSQAQTASTLTAPPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSK
Ga0070665_10083066113300005548Switchgrass RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKT
Ga0070704_10186681513300005549Corn, Switchgrass And Miscanthus RhizosphereVRLHMTYRRMVLFALLAASALTPVLFSQGRRGAQAAPQAPPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSK
Ga0066700_1105270813300005559SoilMAYRRPVLFALLAASALTPILFAQNRQQTPAPQASTAKAQPFDPHDISGIWKNPGGFDVGLGTDRPPM
Ga0070664_10074742623300005564Corn RhizosphereMAYRRTVLFALLAASALTPILFAQDTEQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARN
Ga0066703_1038252113300005568SoilMTYRRQALVALVAVLALTQILFAQRNQQSQAQTASTPTAPPFDAHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNTPL
Ga0068857_10136922913300005577Corn RhizosphereMTYRQSRLRAVALALRRTALFALVAVLVLVPNLFAQRGQRNQAPAPPSNLPFDPHDISGIWRNPGGFDPIVGTNRPPMTAWGKEQWSKTRASAR
Ga0068857_10222077623300005577Corn RhizosphereMTHRRMALFTLVAVLALMQILIAQTPSTPKAQPFDPHDISGIWKNPGGFDPIIGTNRPPMTDGGKEKWSKTRASARNTP
Ga0068866_1079598723300005718Miscanthus RhizosphereMTSRKALFALVAVLALAQILLAQRSQQNQPQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMT
Ga0066903_10269779113300005764Tropical Forest SoilMTYRRTVLFALLAVLALTEILFAQRGQRQATPAPPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSK
Ga0066903_10412833033300005764Tropical Forest SoilMTSRRKALVALGAVLATAQILFAQNNQPFDPHDISGIWRNPGGFDPILG
Ga0068863_10154912313300005841Switchgrass RhizosphereMTYRHLGLRAVALALRRTVLFALLAVSALATILFSQNRQTQAPPAKAQPFDPHDISGIWKNPGGFDPILGNNRPP
Ga0068860_10202083223300005843Switchgrass RhizosphereMTHRRTVLFALMAASALAPILFSQNRGQTPAPPASPARALPFDPRDISGIWKNPGGFDPIIGTTRPPMTEWG
Ga0075417_1048192323300006049Populus RhizosphereMKYRRTALFALVAVSALAQIFFAQNAPRGQRQAQTASTPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTR
Ga0068871_10125227723300006358Miscanthus RhizosphereMRYRFLASYVALVAALALAPSLFAQRGGKQKQAEKDSPTKNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRA
Ga0079221_1120099113300006804Agricultural SoilMRYRFQVLSPALVALLALTGIVLFAQSSPKTQPQQATPANAQPFDPHDISGIWKNPGGFDPVLGTNRPPMTDWGKEQWSKTRASARNTP
Ga0075421_10028991343300006845Populus RhizosphereMTYRRTALFALVAVLALTTFLFAQNTPQRQAQTPSTAKAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASARNTPL
Ga0075421_10169575533300006845Populus RhizosphereMTYRRTVLFALLAASALTPILFAQNRQQTPAPQAPPAKPQPFDPHDISGIWKNPGGFDPIIGTNRPPMTEWGKEKWS
Ga0075431_10056180133300006847Populus RhizosphereMTYRRTVLFALLAASALTPILFSQNRQTQTPQAPQTPPAKAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKW
Ga0075425_10250707013300006854Populus RhizosphereMAHRRMVLFALLAASALTAILIAQDGEQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRA
Ga0075429_10023799713300006880Populus RhizosphereMTYRRTALFALVAVLALTTFLFAQNTPQRQAQTPSTATAQPFDPHDISGIWKNPGGFDPIIGTNRPPMTEWGKE
Ga0075435_10082690333300007076Populus RhizosphereMTYRRTVLFALLAASALTPILFSQNRQTQTPQAPQTPPAKAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEK
Ga0111539_1057540433300009094Populus RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANPQPFDPHDISGYWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASAR
Ga0111539_1131181423300009094Populus RhizosphereMTHRRTVLFALLAVSALAPILFSQNRQAPAPQTPPVKAQTFDPHDISGIWKNPGGFDPIIGTNR
Ga0111539_1287003023300009094Populus RhizosphereMNRRTALFALLAVLVLMPNLFAQRGQRNQAPTPPPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTDWGKEQWSKTRASA
Ga0114129_1302610823300009147Populus RhizosphereMTYRRTALFALVAVLVLMQIVFAQNTPQRQAQTPSTAKAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASA
Ga0105243_1169373113300009148Miscanthus RhizosphereMTYRRTALFALVAVSALTQILVAQRNQQSQPQTGSPAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTA
Ga0111538_1269766113300009156Populus RhizosphereMAFFALMCVLVLMQILFAQNTPQRQAQTPSTAKAQPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSK
Ga0111538_1336303523300009156Populus RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANPQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEQWSKTRASARN
Ga0075423_1125330323300009162Populus RhizosphereMNRRTALFALLAVLVLMPNLFAQRGQRNQAPPASTGPALPFDPHDISGIWRNPGGFDPIIGTNRPPMTAWGKEQWSKTRASARNTPLAFGFY
Ga0105241_1070248723300009174Corn RhizosphereMAYRRTVLFALLAASALTPILFAQNRPQTPAPEAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKT
Ga0105242_1173095613300009176Miscanthus RhizosphereMTYRHLGLRAVALALRRTVLFALLAVSALAPILFSQNRQTQAPPAKAQPFDPHDISGIWKNPGGFDPILGNNR
Ga0105242_1330427723300009176Miscanthus RhizosphereMTYRRKALFALVAVLASAQILSAQRNQQNQAPTASTAKALPFDPRDISGIWRNPGGFDPILGTNRPPMTAWGK
Ga0126374_1140781423300009792Tropical Forest SoilMMYRRTALFALVAVLVLMQMLFAQNRGQRQATQAPPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGREKWSKTRASARNTPL
Ga0126382_1081943623300010047Tropical Forest SoilMTYRHTALFALVAVLALAPILLSQNRGRGQAPQAPPSNLPFDPHDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASARNTPLAF
Ga0126382_1082110913300010047Tropical Forest SoilMTYRRTALFVLVAVSALKPILFSQNRQQTPAPQTPPSKAQPFDPRDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASARNTPLA
Ga0126373_1151675113300010048Tropical Forest SoilMTYRRTALFALVGALVLMQILFAQNAPRGQRGAQTASTPSNLPFDPHDISGIWKNPGGFDPIIGNNRPPMTEWGKEKWSKT
Ga0134109_1020069623300010320Grasslands SoilMTYRRTALFALVAVSALTQVLVAQRGQRNQAPAASTANSLPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWG
Ga0126376_1142687323300010359Tropical Forest SoilMTHRRQALVALVAVLALAQILLAHRNQQSQAQTASTPSNLPFDPHDISGIWRNPGGFDPILGMNRPPMTAWGKE
Ga0126378_1155935023300010361Tropical Forest SoilMTYRRTAWFALVAISASTPVLFAQNRQPTQAPAASATKDQPFDPHDISGIWKNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNT
Ga0126378_1160148823300010361Tropical Forest SoilMTYRRTALLALVGVLVLMQILFAQNAPRGQRGAQTASTPSNLPFDPHDISGIWRNPGGFDPIIGNNRPPMTEWGKEKWSKTRASARNTPLA
Ga0134127_1223338613300010399Terrestrial SoilMAYRRTVLFALLAASALTPILFAQDGEQTPAPQAPAAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARNTPLAF
Ga0134127_1315468523300010399Terrestrial SoilMRYRRTALFALVAVLVLMQMLFAQNRGQRQTTQAPPSNLPFDPRDISGIWRNPGGFDPITGMNRPPMTEWGKEKWSKTRAS
Ga0134123_1073776523300010403Terrestrial SoilMTYRHLGLRAVALALRRTVLFALLAVSALTPILFSQNRQTPAAPAQPAKAQPFDPHDISGIWKNPGGFDPILGNNRPPMTEWGK
Ga0134123_1198856723300010403Terrestrial SoilMTYRHTILFALLAASALAPLVFSQAASQAKVQDFDPHDISGIWKNPGGFDPIIGTNR
Ga0137389_1171122513300012096Vadose Zone SoilMAYRRQALFALVAVLAVAQILFAQRNQQDQAQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNTPLAFG
Ga0137350_109892323300012166SoilMTHRHLRLRAVALALRRTVLFALMAASALTPVFFSQNRAQTPVPQASPAKPQPFDPHDISGIWKNPGGFDPIIGTTRPPMTEWGKEKWSKTRA
Ga0137388_1072784213300012189Vadose Zone SoilMTYRRTALFALVAVSALTQILVAQRGQRNQAPAASTANSLPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASA
Ga0137383_1116584013300012199Vadose Zone SoilMRYRRTALFALVAVSALTQILVAQRGQRNQAPAASTANSLPFDPHDISGIWRNPGGFDPIIGTNRPPMT
Ga0137365_1103437323300012201Vadose Zone SoilMTYRRQALVALVAVLALAQILFAQRNQQSQAQTASTPTAPPFDAHDISGICRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNTPL
Ga0137362_1087977923300012205Vadose Zone SoilMAYRRTVLFALLAASALTPILFAQNRQQTPAPQAPPAKVQPFDPRDISGIWKNPGGFDPILGTNRPPMTEWG
Ga0137377_1180287323300012211Vadose Zone SoilMTYRRQALVALVAVLALAQILFAQRNQQSQAQTASTPTAPPFDAHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNT
Ga0150985_11531279523300012212Avena Fatua RhizosphereMTYRRTVLFAFLTASAMTTILVAQNSQQTPAPQAPAAKPFDPHDISGIWKNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARNTPLAFGFY
Ga0137370_1032250133300012285Vadose Zone SoilMTYRRQALVALVAVLALAQILFAQRNQQSQAQTASTATAPPFDPHDISGIWRNPGGFDPILGTNRPPM
Ga0137387_1131285013300012349Vadose Zone SoilMAYRRTVLFALLAASALTPILFAQNRQQTPAPQASTAKAQPFDPHDISGIWKNPGGFDVGLGVD
Ga0137372_1027440833300012350Vadose Zone SoilMTYRRQALVALVAVLALAQILFAQRNQQSQAQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASA
Ga0137360_1081239913300012361Vadose Zone SoilMAYRRTVLFALLAASALTPILFAQNRQQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPILGTNRPAMT
Ga0150984_10702755013300012469Avena Fatua RhizosphereMTYRHTVLFALLAASALTATVFSQNRQQTPPAQPSTAKAPPFDPHDISGIWKNPGGFDPIIGMNRPPMTEW
Ga0137397_1123830423300012685Vadose Zone SoilMAYRRQALFALVAVLAVAQILFAQRNQQDQAQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASAR
Ga0157299_1008471723300012899SoilMTHRRKVLFALLAASALAPILFSQNRQATAPQAPPAKPQPFDPHDISGIWKNPGGFDPIIGA
Ga0137395_1031682833300012917Vadose Zone SoilMTHRHLGLRAVALALRRTVLFALLAASALAPLLFSQAKVQDFDPHDISGIWKNPGGFDVALGPERPPMTAWKKEKWSKTR
Ga0137404_1140607213300012929Vadose Zone SoilMTYRRKALFALVAVLASAQILVAQSNQQNQAQTAATAKALPSDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNTPLAF
Ga0164301_1112981813300012960SoilMAYRRTVLFALLAASALTPILFAQDEQQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTE*
Ga0126369_1267692723300012971Tropical Forest SoilMTYRRTVWFALVAVLVLVQMLFAQRGQRQATPAAPSNLPFDPHDISGIWRNPGGFDPILGMNRPPMTE
Ga0126369_1320390723300012971Tropical Forest SoilMTYRCKAIFALVAVLAFAQILVAQRNQQDQAQTASTATVLPFDPHDISGIWRNPGGFDPILGTNRPPMTDWGKEQWSKT
Ga0134077_1018077723300012972Grasslands SoilMTYRRTALFALVAVSALTPILFSQNRQQTPAPQAPPAKAQPFDPHDISGIWKNPGGFDVALGADRPPMTAWGKEKWSK
Ga0164307_1056492113300012987SoilMTYRRTALFALVAVLALAHISFAQRGQRNQAQTPSPTKDLPFDPHDISGIWRNPGGFDPILGMNRPPMTEWGKEQWSKTRASARNTPLAF
Ga0157378_1276920323300013297Miscanthus RhizosphereMALFTLVAVLALMQILIAQTPSTPKAQPFDPHDISGIWKNPGGFDPIIGTNRPPMTDWGKEKWSKTRAS
Ga0157375_1017544043300013308Miscanthus RhizosphereMTYRHLGLRAVALALRRTVLFALLAVSALAPILFSQNRQTQAPPAKAQPFDPHDISGIWKNPGGFDPILGNNRPPMTEWGKEKWSKT
Ga0157380_1155630113300014326Switchgrass RhizosphereMTYRHTVLFALLAVSALTPILFSQAPPAKPQTFDPRDISGIWKNPGGFDPIIGTTRPPMT
Ga0157377_1018408233300014745Miscanthus RhizosphereMTYRRTVLFVLIAASALTPILFSQNRQQTPAPQVSPAKPQPFDPHDISGIWKNPGGFDPIIG
Ga0157377_1057248213300014745Miscanthus RhizosphereMALFTLVAVLALMQILIAQTPSTPKAQPFDPHDISGIWKNPGGFDPIIGTNRPPMTDWGKEKWSKT
Ga0132255_10054353413300015374Arabidopsis RhizosphereMALFAFLAASVLTAILIAQDGEQAPAPQAPPGKAQPFDPHDISGIWRNPGGFDPIVGMNRPPMTEWGKEKWSKTRA
Ga0132255_10508448423300015374Arabidopsis RhizosphereMTYRRKALFALVAVLALPQILLAQRNQPNQPQTASPAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKE
Ga0182032_1100200913300016357SoilMTYRRTALFAAVAVLALAQIFFAQRGQRNQGQTPSPPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTDWGK
Ga0182034_1194620513300016371SoilMTYRRTAFLSLVAVSVLTTVLFAQRGQRNQAPAAPTPSNLPFDPHDISGIWRNPGGFDPILGMNRPPMTEWGKEQWSKTRASARN
Ga0184604_1017626913300018000Groundwater SedimentMTYRRTVLFALLAVSALTPILFAQNRQQTPAPQAPPAKPQPFDPHDISGIWKNPGGFDPIIGTNRPP
Ga0184608_1019249823300018028Groundwater SedimentMTYRRTVLFAFLAASAVTTILFAQNSQQTPAPQAPAAKPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKT
Ga0190274_1395454623300018476SoilMAYRRMALFAFLAASALTPILVAQDEERTPAPQAQPANAQPFDPHDISGIWRNPGGFDPIIGMN
Ga0210407_1052837013300020579SoilMTYRRKALFALVAVLALAQILFAQRNQQNQAQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNTPL
Ga0210406_1098028213300021168SoilMNYRRTALFAVVAVLVLMQILFAQNAARGQRQAETASTPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARNTPLAFG
Ga0222728_106064913300022508SoilMAYRRTVLFALLAASALTPILFAQNRQQTPAPQASTAKAQPFDPHDISGIWRNPGGFDVALGNQRPPMTDW
Ga0242660_112330523300022531SoilMTYRRTALFALVAVLAFAQIFLAQRGQRNQAQTPSPTKDLPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASARNTPLAF
Ga0242654_1001621613300022726SoilMTYRRTALFALVAVLALAQISFAQRGQRNQAQTPSPTKDLPFDPHDISGIWRNPGGFDPILGMNRPPMTEWGKEKWSK
Ga0207682_1013210333300025893Miscanthus RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANPQPFDPHDISGIWRNPGGFDPIIGMNRQSLL
Ga0207680_1008807243300025903Switchgrass RhizosphereMAYRRTVLFALLAASALTPILFAQDTEQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPM
Ga0207701_1014660643300025930Corn, Switchgrass And Miscanthus RhizosphereMTHRRMALFTLVAVLALMQILIAQTPSTPKAQPFDPHDISGIWKNPGGFDPIIGTNRPPMTDWGKEKWSKTRASARNTPLAFG
Ga0207644_1014324933300025931Switchgrass RhizosphereMTYRHLRLRAVALALRHLRLRAVALALRRTILCALLAASAFAPLLFSQAKVQDFDPHDISGIWKNPGGFDPILGNNRPPMTEWGKEKWSKTRASARNT
Ga0207686_1101787713300025934Miscanthus RhizosphereMTYRHLGLRAVALALRRTVLFALLAVSALAPIIFSQNRQTQAPPAKAQPFDPHDISGIWKNPGGFDPILGNNRPPMTEWGKEKWSKTRASARNT
Ga0207704_1144820023300025938Miscanthus RhizosphereMAYRRTVLFAFLAASALTPILFAQNRQQTPAPQAPPAKPQPFDPRDISGIWKNPGGFDPIIGTNRPPMTEWGKEKW
Ga0207651_1024165833300025960Switchgrass RhizosphereMAYRRTVLFALLAASALTPILFAQDTEQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKT
Ga0207651_1069708023300025960Switchgrass RhizosphereMTYRHLGLRAVALALRRTVLFALLAVSALAPMFFSQNRQTQAPQAPPAKAQTFDPHDISGIWKNPGGFDPIIGSNRPPMTEWGK
Ga0207703_1106147713300026035Switchgrass RhizosphereMTYRHMALFALVAVLVLLQILVAQNTPQRGAQTTTSATKALPFDPHDISGIWKNPGGFDPILGNERPPMTE
Ga0207641_1030408913300026088Switchgrass RhizosphereMTYRHLGLRAVALALRRTVLFALLAVSALAPILFSQNRQTQAPPAKAQPFDPHDISGIWKNPGGFDPILGNNRPPMTE
Ga0207648_1173426913300026089Miscanthus RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANPQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEQWSKTRASARNTPLAFG
Ga0207674_1160071913300026116Corn RhizosphereMTYRRTALIALVAVSVLIPNLFAQRGQRGQAQPAATGPALPFDPHDISGIWRNPGGFDPIVGTNRPPMTEWGKEKWS
Ga0207675_10099485813300026118Switchgrass RhizosphereMRYRRTALFALVAVLVLMQMLFAQNRGQRQTTQEPPSNLPFDPHDISGIWRNPGGFDPIVGMNRPPMTEWGKEKWSKTRASARN
Ga0207683_1006252713300026121Miscanthus RhizosphereMAYRRMALFAFLAASALTPILVAQDEQQTPAPQAQPANAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEQWSKTRASARNT
Ga0207698_1079367913300026142Corn RhizosphereMTYRHLRLRAVALALRHLRLRAVALALRRTILCALLAAAAFAPLLFSQAKVQDFDPHDISGIWKNPGGFDPILGNNRPPMTEWGKEKWSKTRASARNT
Ga0209376_122149723300026540SoilMTYRRTALFALVAVSALTPILFSQNRQQTPAPQAPPAKAQPFDPHDISGIWKNPGGFDPILGTNRPPMTEWGKEKWSKTRASARNTPLAFGFF
Ga0209999_102981913300027543Arabidopsis Thaliana RhizosphereMTHRRKVLFALLAASALAPILFSQNRQATAPQAPPAKPQPFDPHDISGIWKNPGGFDPIIGANRPPMTEWGKEKWSKTRASARN
Ga0209011_112649613300027678Forest SoilMTYRRTALFALVAVLALAQILLAQRNQQNQAQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSK
Ga0209380_1049652413300027889SoilMTYRRTALFALVAVLASVQILLAQRNQPNQAQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASA
Ga0268265_1059190213300028380Switchgrass RhizosphereMAYRGMVLFALLAASAVTPILVAQNRQQTPAPPAKPQPFDRRDISGIWRNPGGFDPIIGTNRPPMTEWGKEKWSKTRASAR
Ga0268264_1093253923300028381Switchgrass RhizosphereMTYRRTALFALVAVSALTQILVAQRGQRNQAPAAPTASSLPFDPHDISGIWRNPGGFDPIIGTNRPPMTDWGKEKWS
Ga0268264_1151382623300028381Switchgrass RhizosphereMTHRHTVLFALLAASALTPILFAQNRQQTPAPQAPPAKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRAS
Ga0307312_1018355213300028828SoilMTYRRTVLFAFLAASAVTTILFAQNSQQTPAPQAPAVKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARNTPLAFGFY
Ga0307308_1011037613300028884SoilMTYRRTVLFAFLAASAVTTILFAQNSQQTPAPQAPAAKPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKE
Ga0170824_12475938823300031231Forest SoilMAYRRQALFALVAVLAVAQILFAQRNQQDQAQTASTATALPFDPHDISGIWRNPGGFDPILGTNRPAMTA
Ga0308179_102600913300031424SoilMTYRRTVLFAFLAASAVTTILFAQNSQQTPAPQARPVKAQPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARNTPLAF
Ga0170819_1570107823300031469Forest SoilMTNRRMALFAFLAVSALAPLLFSQAKVQDFDPHDISGIWRNPGGFDPIIGNNRPPMTEWGKEKWSK
Ga0310888_1064874813300031538SoilMAYRRMALFAFLAASVLTAIVIAQDGEQAPAPQAPSSAKAKPFDPHDISGIWRNPGGFDPIIGTKRPPMTEWGKEKWSKTRA
Ga0307469_1151133523300031720Hardwood Forest SoilMIMTFRRTAFFVLLAVLALTQILFSQNRGQRQATQAPPSNLPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARN
Ga0307468_10022337033300031740Hardwood Forest SoilMTSRRKALFALVAVLALTQILVAQRNQQNQPQTASTAKALPFDPHDISGIWRNPGGFDPILGTNRPPMTAWGKEQWSKTRASV
Ga0307468_10054743133300031740Hardwood Forest SoilMAYRRTVLFALLAASALTPILFAQNRQQTPAPQAPPAKPQPFDPHDISGIWKNPGGFDPIIGTNRP
Ga0310900_1162260123300031908SoilMTHRRTVLFALLAVSALSPILFSQNRQAPAPQAPPAKPQPFDPHDISGIWKNPGGFDPIIGTNRPPMTEWGKEKWSKTRASARNSPLAF
Ga0306923_1113821213300031910SoilMMYRRTASFALVGVLALAQIFFAQRGQRNQAQTPSPTKDLPFDPHDISGIWRNPGGFDPILGMNRPPMTEWGKEQWS
Ga0306921_1244968513300031912SoilMTYRRTAFLSLVGVLVFMQILFAQRGQRGAQAPSTPSNLPFDPHDISGIWRNPGGFDPILGMNRPPMTEWGKEQWSKTRASARN
Ga0310909_1073740123300031947SoilMTSRRQAFFALVAVLAAAQILFAQRNQQNQTQTASATAALPFDPHDISGIWRNPGGFDPILGMNRPPMTAWGKEQWS
Ga0310902_1090140823300032012SoilMKYRRTVLFALLAVSALAPILFSQNRQAPAAQAPPAKAQPFDPHDISGIWKNPGGFDPIIGNNRPPMTEW
Ga0310895_1012666013300032122SoilMAYRRMALFAFLAASVLTAIVIAQDGEQAPAPQAPSSAKAKPFDPHDISGIWRNPGGFDPIIGMNRPPMTEWGKEKWSKTRASARNTPLAFGF
Ga0315912_1139331723300032157SoilMTCRRTVLFAFLAASALTTILLAQDGEQAPAPKAPAAKSSQPFDPKDISGIWRNPGGFDPIIGMNRPAMTEWGKEQWSKTR
Ga0310914_1178911613300033289SoilMTYRRTAFVALVAVLVLMQILFAQNAPRGQRGAQEASTPSNLPFDPHDISGIWRNPGGFDPIIGNNRPPMTEWGKEKWSKTRASARNTPLAYG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.