Metagenome Family F047593

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047593
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	71 residues
Representative Sequence	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE
Number of Associated Samples	76
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.34 %
% of genes near scaffold ends (potentially truncated)	29.53 %
% of genes from short scaffolds (< 2000 bps)	81.21 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.758 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (65.101 % of family members)
Environment Ontology (ENVO)	Unclassified (70.470 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.00% β-sheet: 27.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00589	Phage_integrase	4.03
PF02371	Transposase_20	3.36
PF07690	MFS_1	3.36
PF08281	Sigma70_r4_2	2.68
PF01619	Pro_dh	2.01
PF08241	Methyltransf_11	1.34
PF00702	Hydrolase	1.34
PF01047	MarR	1.34
PF00768	Peptidase_S11	1.34
PF09335	SNARE_assoc	1.34
PF14659	Phage_int_SAM_3	1.34
PF04542	Sigma70_r2	1.34
PF00196	GerE	1.34
PF08878	HamA	1.34
PF14511	RE_EcoO109I	0.67
PF00561	Abhydrolase_1	0.67
PF00324	AA_permease	0.67
PF01551	Peptidase_M23	0.67
PF03704	BTAD	0.67
PF10012	DUF2255	0.67
PF13683	rve_3	0.67
PF13649	Methyltransf_25	0.67
PF01872	RibD_C	0.67
PF02518	HATPase_c	0.67
PF12697	Abhydrolase_6	0.67
PF03773	ArsP_1	0.67
PF00326	Peptidase_S9	0.67
PF01425	Amidase	0.67
PF13407	Peripla_BP_4	0.67
PF10417	1-cysPrx_C	0.67
PF04075	F420H2_quin_red	0.67
PF00106	adh_short	0.67
PF00756	Esterase	0.67
PF08843	AbiEii	0.67
PF04265	TPK_B1_binding	0.67
PF00190	Cupin_1	0.67
PF00149	Metallophos	0.67
PF03795	YCII	0.67
PF03551	PadR	0.67
PF00528	BPD_transp_1	0.67
PF02945	Endonuclease_7	0.67
PF13472	Lipase_GDSL_2	0.67
PF09900	DUF2127	0.67
PF05066	HARE-HTH	0.67
PF00211	Guanylate_cyc	0.67
PF10096	DUF2334	0.67
PF03098	An_peroxidase	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.36
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	2.01
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.34
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.34
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.34
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.34
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.34
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.34
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.34
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.34
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.67
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.67
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.67
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.67
COG3343	DNA-directed RNA polymerase, delta subunit	Transcription [K]	0.67
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.67
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.67
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.67
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.67
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.67
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	0.67
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.67
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.67
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.67
COG1564	Thiamine pyrophosphokinase	Coenzyme transport and metabolism [H]	0.67
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.67
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.67
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.76 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.76 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.76 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.27 %
Unclassified	root	N/A	36.24 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.58 %
Unclassified	root	N/A	36.24 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.70 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.67 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.67 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.67 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.34 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.67 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.70 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.67 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.67 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.67 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.70 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.67 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.67 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.67 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.70 %
Rhodopirellula sallentina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula sallentina	0.67 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	0.67 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.67 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100589397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2789	Open in IMG/M
3300000956\|JGI10216J12902_101993556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3323	Open in IMG/M
3300000956\|JGI10216J12902_114381411	Not Available	558	Open in IMG/M
3300001534\|A15PFW1_10011218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49771	Open in IMG/M
3300005174\|Ga0066680_10015222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4077	Open in IMG/M
3300005174\|Ga0066680_10490808	Not Available	773	Open in IMG/M
3300005178\|Ga0066688_10844826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300005179\|Ga0066684_10855850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300005181\|Ga0066678_10092270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1817	Open in IMG/M
3300005187\|Ga0066675_10539750	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300005451\|Ga0066681_10171513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1286	Open in IMG/M
3300005533\|Ga0070734_10131816	Not Available	1456	Open in IMG/M
3300005559\|Ga0066700_10729661	Not Available	676	Open in IMG/M
3300005561\|Ga0066699_10187350	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300005574\|Ga0066694_10257090	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005764\|Ga0066903_105128952	Not Available	694	Open in IMG/M
3300005764\|Ga0066903_105780361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300006796\|Ga0066665_10218951	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300007775\|Ga0102953_1387564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300009012\|Ga0066710_100607107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1660	Open in IMG/M
3300009038\|Ga0099829_10073717	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300009038\|Ga0099829_10211849	Not Available	1571	Open in IMG/M
3300009038\|Ga0099829_11435393	Not Available	570	Open in IMG/M
3300009088\|Ga0099830_10130416	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300009088\|Ga0099830_10858331	Not Available	750	Open in IMG/M
3300009090\|Ga0099827_10116178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2148	Open in IMG/M
3300009090\|Ga0099827_10198384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1668	Open in IMG/M
3300009090\|Ga0099827_10247894	Not Available	1496	Open in IMG/M
3300009090\|Ga0099827_11813680	Not Available	532	Open in IMG/M
3300009090\|Ga0099827_11970406	Not Available	508	Open in IMG/M
3300009789\|Ga0126307_10448765	Not Available	1041	Open in IMG/M
3300009840\|Ga0126313_10016632	All Organisms → cellular organisms → Bacteria	4803	Open in IMG/M
3300009840\|Ga0126313_10577832	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009840\|Ga0126313_11080810	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300010041\|Ga0126312_10214347	Not Available	1347	Open in IMG/M
3300010166\|Ga0126306_10762104	All Organisms → cellular organisms → Bacteria → Terrabacteria group	779	Open in IMG/M
3300010336\|Ga0134071_10190765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300011003\|Ga0138514_100031952	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1002	Open in IMG/M
3300011003\|Ga0138514_100085454	Not Available	673	Open in IMG/M
3300011271\|Ga0137393_10736195	Not Available	844	Open in IMG/M
3300011994\|Ga0120157_1023393	Not Available	1477	Open in IMG/M
3300012096\|Ga0137389_10161125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1845	Open in IMG/M
3300012189\|Ga0137388_11483162	Not Available	616	Open in IMG/M
3300012198\|Ga0137364_11468553	Not Available	503	Open in IMG/M
3300012199\|Ga0137383_10330320	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300012199\|Ga0137383_10437917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300012199\|Ga0137383_10788379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300012201\|Ga0137365_10018643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5412	Open in IMG/M
3300012201\|Ga0137365_10128057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	1908	Open in IMG/M
3300012201\|Ga0137365_10492249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	901	Open in IMG/M
3300012201\|Ga0137365_10534156	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012201\|Ga0137365_10955820	Not Available	623	Open in IMG/M
3300012204\|Ga0137374_10002725	All Organisms → cellular organisms → Bacteria	20750	Open in IMG/M
3300012204\|Ga0137374_10011386	All Organisms → cellular organisms → Bacteria	10407	Open in IMG/M
3300012204\|Ga0137374_10019422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7731	Open in IMG/M
3300012204\|Ga0137374_10035056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5406	Open in IMG/M
3300012204\|Ga0137374_10036815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5245	Open in IMG/M
3300012204\|Ga0137374_10076022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3279	Open in IMG/M
3300012204\|Ga0137374_10255534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1466	Open in IMG/M
3300012204\|Ga0137374_10271046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1410	Open in IMG/M
3300012204\|Ga0137374_10305172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300012204\|Ga0137374_10372548	Not Available	1144	Open in IMG/M
3300012204\|Ga0137374_10726617	Not Available	743	Open in IMG/M
3300012204\|Ga0137374_10776865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300012206\|Ga0137380_10592850	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300012206\|Ga0137380_11050381	Not Available	695	Open in IMG/M
3300012206\|Ga0137380_11665357	Not Available	522	Open in IMG/M
3300012207\|Ga0137381_10549516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1007	Open in IMG/M
3300012207\|Ga0137381_10626964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300012207\|Ga0137381_10854645	Not Available	788	Open in IMG/M
3300012209\|Ga0137379_10335522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1422	Open in IMG/M
3300012209\|Ga0137379_10539323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1074	Open in IMG/M
3300012209\|Ga0137379_11237183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012210\|Ga0137378_10574403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300012210\|Ga0137378_10579094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1032	Open in IMG/M
3300012210\|Ga0137378_10597676	Not Available	1013	Open in IMG/M
3300012210\|Ga0137378_11524834	Not Available	579	Open in IMG/M
3300012210\|Ga0137378_11635014	Not Available	552	Open in IMG/M
3300012211\|Ga0137377_10371582	Not Available	1367	Open in IMG/M
3300012211\|Ga0137377_10820015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300012211\|Ga0137377_11416574	Not Available	623	Open in IMG/M
3300012349\|Ga0137387_11248519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012350\|Ga0137372_10171300	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300012350\|Ga0137372_10190316	Not Available	1649	Open in IMG/M
3300012350\|Ga0137372_10314846	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300012350\|Ga0137372_10337873	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300012350\|Ga0137372_11048301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300012350\|Ga0137372_11195588	Not Available	514	Open in IMG/M
3300012351\|Ga0137386_10181537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1510	Open in IMG/M
3300012351\|Ga0137386_10460958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300012353\|Ga0137367_10338060	Not Available	1073	Open in IMG/M
3300012353\|Ga0137367_10877557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300012353\|Ga0137367_11038717	Not Available	557	Open in IMG/M
3300012353\|Ga0137367_11212579	Not Available	504	Open in IMG/M
3300012354\|Ga0137366_10113909	Not Available	2045	Open in IMG/M
3300012354\|Ga0137366_10347840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1085	Open in IMG/M
3300012354\|Ga0137366_10566929	Not Available	816	Open in IMG/M
3300012354\|Ga0137366_11172980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300012355\|Ga0137369_10054374	All Organisms → cellular organisms → Bacteria	3482	Open in IMG/M
3300012355\|Ga0137369_10227083	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300012355\|Ga0137369_10528695	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012356\|Ga0137371_10342763	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300012356\|Ga0137371_10543323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300012356\|Ga0137371_10987763	Not Available	639	Open in IMG/M
3300012356\|Ga0137371_11401077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300012357\|Ga0137384_10975303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012358\|Ga0137368_10059677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3167	Open in IMG/M
3300012358\|Ga0137368_10374452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300012358\|Ga0137368_10453873	Not Available	833	Open in IMG/M
3300012358\|Ga0137368_10639492	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300012358\|Ga0137368_10993110	Not Available	504	Open in IMG/M
3300012358\|Ga0137368_11004443	Not Available	500	Open in IMG/M
3300012359\|Ga0137385_11498933	Not Available	538	Open in IMG/M
3300012360\|Ga0137375_10103800	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula sallentina	2886	Open in IMG/M
3300012360\|Ga0137375_10713859	Not Available	817	Open in IMG/M
3300012360\|Ga0137375_10794231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300012360\|Ga0137375_11329325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300012362\|Ga0137361_10906870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300012363\|Ga0137390_10026861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5433	Open in IMG/M
3300012532\|Ga0137373_10041598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4353	Open in IMG/M
3300012532\|Ga0137373_10189094	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300012532\|Ga0137373_10191715	Not Available	1690	Open in IMG/M
3300012532\|Ga0137373_10686202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300012930\|Ga0137407_10058976	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300012977\|Ga0134087_10650119	Not Available	552	Open in IMG/M
3300012982\|Ga0168317_1017607	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300014052\|Ga0120109_1155884	Not Available	535	Open in IMG/M
3300014166\|Ga0134079_10495087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300015359\|Ga0134085_10175114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300018027\|Ga0184605_10001420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7723	Open in IMG/M
3300018061\|Ga0184619_10145829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300018482\|Ga0066669_10863291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300020001\|Ga0193731_1175020	Not Available	512	Open in IMG/M
3300021080\|Ga0210382_10508418	Not Available	534	Open in IMG/M
3300021413\|Ga0193750_1049358	Not Available	889	Open in IMG/M
3300026328\|Ga0209802_1049492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2088	Open in IMG/M
3300027846\|Ga0209180_10046268	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300027846\|Ga0209180_10143255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1375	Open in IMG/M
3300027862\|Ga0209701_10699284	Not Available	523	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10256496	Not Available	781	Open in IMG/M
3300028793\|Ga0307299_10203290	Not Available	745	Open in IMG/M
3300028878\|Ga0307278_10108433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1248	Open in IMG/M
3300031670\|Ga0307374_10073383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3227	Open in IMG/M
3300031670\|Ga0307374_10393984	Not Available	804	Open in IMG/M
3300031671\|Ga0307372_10066126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3241	Open in IMG/M
3300031672\|Ga0307373_10294875	Not Available	1037	Open in IMG/M
3300031716\|Ga0310813_10899442	Not Available	802	Open in IMG/M
3300032805\|Ga0335078_10021018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9709	Open in IMG/M
3300033233\|Ga0334722_10136497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1843	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.64%
Aquatic	Environmental → Aquatic	3.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.63%
Freshwater	Environmental → Aquatic → Freshwater	2.01%
Sediment	Environmental → Aquatic → Sediment	1.34%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.34%
Geologic	Environmental → Terrestrial → Geologic	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.26%
Clay	Environmental → Terrestrial → Soil → Clay	2.68%
Lake	Environmental → Aquatic → Freshwater → Lake	1.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.34%
Loam	Environmental → Terrestrial → Soil → Loam	1.34%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Mine	Environmental → Terrestrial → Geologic → Mine	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	75.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.41%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.34%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	65.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.34%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1005893971	3300000956	Soil	LREKRQLKGYRVRLRVVEEHVVALLAESPDDAKARAETDLRRGGQFEDIQDSWPEEIASVEALAVEPYLELEWTAWLRAL*
JGI10216J12902_1019935563	3300000956	Soil	LAATVVEQYDVALLAESSEDAKARAEADIRGGGEFEAIQDSWPEEIVSVEAVAVEPYPDLD*
JGI10216J12902_1143814112	3300000956	Soil	RLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWREEIVSVEALAVEPYPELE
A15PFW1_1001121842	3300001534	Permafrost	LKGYRVRLRVVEEYDVALLAESAEDAKARAEVLARDGEGADALADSWPEELVSVEAVAVEPYPDIE*
Ga0066680_100152222	3300005174	Soil	VVEEYDVALLAESPDDAKVRRKRTSQRGQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066680_104908081	3300005174	Soil	RHENDFMCAALGGIALSEERQLNSYRVRLRVVEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066688_108448261	3300005178	Soil	MCAALGGIALSEERQLNSYRVRLRVVEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066684_108558501	3300005179	Soil	MCAALGGIALSEERQLNSYRVRLRVVEEYDVALLAESPVDAKARAEADLHKGDQFEDIQDSWPEEIVSIDALAVEPYPELE*
Ga0066678_100922701	3300005181	Soil	VRRARRECREREASPNGYRVRLRVVEEYDVALLAESPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066675_105397502	3300005187	Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066681_101715132	3300005451	Soil	MALSEERQLNGCRVRLRVVEEYDVALLAESLDDAKARAEADLRGGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0070734_101318163	3300005533	Surface Soil	VNGYRVRLRVVQEYEVALWADSESDAKTRAEAIVRDGGEADGLEDSWPEEVIAVEAVAVQLYPDLE*
Ga0066700_107296611	3300005559	Soil	MALSEERQLNGYRVRLRVVEEYDVALLAESLDDAKARAEADLRGGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066699_101873501	3300005561	Soil	LGGNVVSEKHQPNGYRVRLRVVEEYDVALLAESPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVDPYPELE*
Ga0066694_102570901	3300005574	Soil	EEYDVALLAESPDDAKARAEADLRRGDRFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0066903_1051289521	3300005764	Tropical Forest Soil	VRPLRLLVELAVGTEEPELKGYRVRLRVVGEYDVALLAESSQDAKAQAEAEVRGGAKFEAIQDSWPEEIVSVEAVALEPYPDLE*
Ga0066903_1057803611	3300005764	Tropical Forest Soil	VKQLTLLVVLAVGTEEPELKGDRVRLRVVEEYDIALLAESPQDAKARAEADVRGGGEFEANQDSWPEEIVSIEAVGVEPYPDLE*
Ga0066665_102189512	3300006796	Soil	MALSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGDRFEDIQDSWPEEIVSVEALAVEPYPKLE*
Ga0102953_13875641	3300007775	Soil	VNENRELNGYRVRLRVVEEYDVALLAESSEDAMAQAEAEVRGGRAFEAIQDSWPEEIVSVEATAVEPYPELE*
Ga0066710_1006071071	3300009012	Grasslands Soil	MALSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSIDALAVEPYPELE
Ga0099829_100737172	3300009038	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIRDSWPEEIVSIDALAVEPYPELE*
Ga0099829_102118491	3300009038	Vadose Zone Soil	SDFRCAGPGGIAVSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEVDVRKGDQFEDIQDSWPEEVISVQALAVEPYPELE*
Ga0099829_114353931	3300009038	Vadose Zone Soil	VSEKRQLHGYRVRLRVVEEYDVALLAESPDDAKARAEADIRRGDQFEDIQDSWPEDIVSVEALAVEPYPELE*
Ga0099830_101304161	3300009088	Vadose Zone Soil	VSEKRQLHGYRVRLRVVEEYDVALLAESPDDAKALAEADLRKGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0099830_108583312	3300009088	Vadose Zone Soil	LSEERQLNGYRVRLCVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIRDSWPEEIVSIDALAVEPYPELE*
Ga0099827_101161783	3300009090	Vadose Zone Soil	MCAALGGNAVSEKHQPNGYRVRLRVVEEYDVALLAGSPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVELYPELE*
Ga0099827_101983841	3300009090	Vadose Zone Soil	VRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0099827_102478942	3300009090	Vadose Zone Soil	VRLRVVEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEFISVEALAVE
Ga0099827_118136801	3300009090	Vadose Zone Soil	MRERRQLSGYRVRLRVVEEYDVALLAESHDHAKARAEADLRRGDQFEDIQDSWPEEIVLVEALAVERFPELE*
Ga0099827_119704062	3300009090	Vadose Zone Soil	MKGYRVRLRVVEEYDVALLARSAADAKVRAAADVRGGEQFEAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0126307_104487652	3300009789	Serpentine Soil	VRLRAVQEYDVALLAESPDDARARAEADIRRGDGLEDIQDSWPEETVSVEAVAVEPYPDLE*
Ga0126313_100166326	3300009840	Serpentine Soil	LTGYRVRLRIVEEYDVALLAESADDAKARAEADVRRGDEFEDIQDSWPEALVSVEAVAVEPYQELE*
Ga0126313_105778322	3300009840	Serpentine Soil	VRLRVVEEHDVTLLAESPDDAKAHAETDLRRGDEFEDIQESWPEEFVSVEALAVEPYPELE*
Ga0126313_110808102	3300009840	Serpentine Soil	MKGYRVWLRVVEEYDVALLAESAEDAKARAEADVRGGVEFESIEDSWPEQVVSVEALAVEPYPDLE*
Ga0126312_102143472	3300010041	Serpentine Soil	VKGYRVRLRVVEEYEVALLAESEDDAKARAEADVRGGGEFESIEDSWPEEIVSVEAVAVDPYPDLE*
Ga0126306_107621042	3300010166	Serpentine Soil	MEGAMKGYRVRLRVVEEYEVALLAESAEDAKARAEADVRGGVEFESIEDSWPEQVVSVEALAVEPYPHLE*
Ga0134071_101907652	3300010336	Grasslands Soil	MCAALGGIALTEKRPLNGYRVRLRVVEEYGGALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0138514_1000319522	3300011003	Soil	LSDEPQLRGYRVRLRIVEEYDVALLAESPDDAKARAEADVRRGDGFEDIQDSWPEERISVEALAVEPYPELE*
Ga0138514_1000854542	3300011003	Soil	CAARAGIALSEERQLNGYRVRLCVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSIDALAVEPYPELE*
Ga0137393_107361951	3300011271	Vadose Zone Soil	RWAARAGIALSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSIDALAVEPYPELE*
Ga0120157_10233933	3300011994	Permafrost	MAGSDGSGLGDVPEMKGCRVRLRVVEDFEVALLAQSAADARARAEADVRGGDEFEAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0137389_101611251	3300012096	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADIRRGDQFEDIQDSWPEDIVSVEALAVEPYPELE*
Ga0137388_114831622	3300012189	Vadose Zone Soil	GYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIRDSWPEEIVSIDALAVEPYPELE*
Ga0137364_114685531	3300012198	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFDDIEDSWPEEIVSVEALAVEPYAELE*
Ga0137383_103303202	3300012199	Vadose Zone Soil	MCAALGGNAVSEKRQPNGYRVRLRVVEEYDVALLAESHDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137383_104379171	3300012199	Vadose Zone Soil	AGIALSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEFISVEALAVEPYPELE*
Ga0137383_107883791	3300012199	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSIDALAVEPYPELE*
Ga0137365_100186439	3300012201	Vadose Zone Soil	MCAALGGNAVSEKRQPNGYRVRLRVVEEYDVALLAESPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137365_101280572	3300012201	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137365_104922493	3300012201	Vadose Zone Soil	MGDAPEMKGYRVRLRVVEEYDVALLARSATEAKSQAEADVRGGGQFEAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0137365_105341562	3300012201	Vadose Zone Soil	VRLRVVEERDVALLAESPDDAKAHAETDLRRADEFEDIQESWPEEFVSIEALAVEPYPELE*
Ga0137365_109558201	3300012201	Vadose Zone Soil	VCAALGGIGLSEKRQLNGYRVRLRVVEEYDVALLAESHDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137374_1000272519	3300012204	Vadose Zone Soil	MEGGMKGYRVRLRVVEEYDVALLAKSAEDAKARAEADVRGGVECESIEDSWPEQVVSVEALAVEPYPDLD*
Ga0137374_100113865	3300012204	Vadose Zone Soil	MRGYRVQLRVVEMREVALLAESADDATARAEADIRRGEDQFEAIQDSWPGEVVSVEAVAVDSYPELE*
Ga0137374_100194226	3300012204	Vadose Zone Soil	VLVVGTEEPELKGYRVRLRVVEEYDVALLAESSEDAKARAEADIRGGGDFEAIQDSWPEEIVSVKAVAVERYPDLE*
Ga0137374_100350567	3300012204	Vadose Zone Soil	MKGYRVRLRVVEEYDVALLAQSAADARAQAEAEVGEGGEFEAIQDSWPEEIVSVEALAVEPYPDLE*
Ga0137374_100368157	3300012204	Vadose Zone Soil	MCAALGGIALSEKRQLNGYRVRLRIVEEYDVALAESPDDAKARAEADLRGGDQFEDSQDSWPEEIVSVEALAVEPYPELE*
Ga0137374_100760223	3300012204	Vadose Zone Soil	MKGYRVRVRVVEEYDVALLADSGDEAKARAEADVRAGEFPDIQDSWPEEIVSVEAQAVEPYPDLE*
Ga0137374_102555343	3300012204	Vadose Zone Soil	MRRARRNRLERGSQLNGYRVRLRVVEEYDVALLAELPDDAKARAETDLRRGDQFEDIQDSWPEEIVSVEALAVEPYAELE*
Ga0137374_102710463	3300012204	Vadose Zone Soil	MEGAMKGYRVRLRVVEEYEVALLAESAEDAKARAEADVRGGGAFESIEDSWPEEVVSVEALAVEPYPDLE*
Ga0137374_103051723	3300012204	Vadose Zone Soil	LLAESPDDAKAHAETDLRRGDEFEDIQDIWPEEFVSVEALAVEPYPELE*
Ga0137374_103725481	3300012204	Vadose Zone Soil	VGDVPEMKGYRVRLRVVEEYDVALLAGSAADAKARAEADVRGGQQFEAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0137374_107266173	3300012204	Vadose Zone Soil	VRLRIVEEYDVALLAESPDDAKARAEADVRRGDRFEDIQDSWPEERISVESLAVEPYPELE*
Ga0137374_107768652	3300012204	Vadose Zone Soil	VCAALGGIGMSEKRQLNGYRVRLRVVEEYDVALLAESPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137380_105928501	3300012206	Vadose Zone Soil	TAMAWLGRAVGEVPEMKGYRVRLRVVEEYDVALLAESHDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137380_110503811	3300012206	Vadose Zone Soil	LSQERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADVRKGDQFEDIQDSWPEEFVSVEALAVEPYPELE*
Ga0137380_116653572	3300012206	Vadose Zone Soil	MCAALGGIALSEKRQLNGYRVRLRVVEEYDVALLAESPNDAKERAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYQELE*
Ga0137381_105495161	3300012207	Vadose Zone Soil	GEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVELYQELE*
Ga0137381_106269642	3300012207	Vadose Zone Soil	MCAALGGNVVSEKRQPNGYRVRLRVVEEYDVALLAESPEDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137381_108546452	3300012207	Vadose Zone Soil	VCATLGGISLSEKRQLNGYRVRLRVVEEYDVALLAESHDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137379_103355221	3300012209	Vadose Zone Soil	VNGYRLQLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137379_105393232	3300012209	Vadose Zone Soil	VRLRVVEEHDVALLAESPDDAKAHAETDRADEFEDIQESWPEEFVSIEALAVEPHPELG*
Ga0137379_112371831	3300012209	Vadose Zone Soil	IALSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEATVSVEALAVEPYPELE*
Ga0137378_105744032	3300012210	Vadose Zone Soil	VNGYRLRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137378_105790942	3300012210	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSVETLAVEPYAELE*
Ga0137378_105976761	3300012210	Vadose Zone Soil	MKNDFRCAGPGGIAVSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADVRKGDQFEDIQDSWPEEFISVEALAVEPYPELE*
Ga0137378_115248342	3300012210	Vadose Zone Soil	KRQPNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137378_116350141	3300012210	Vadose Zone Soil	DVALLADAPDDAKARAEADLRRRDQFEDIQDSWPEEIVSVEALAGEPYPELE*
Ga0137377_103715822	3300012211	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVELLAESPDDAKERAEADLRRGKQFEDIQDSWPEEIVSIDALAVEPYPELE*
Ga0137377_108200151	3300012211	Vadose Zone Soil	MCAALGGIALSEKRQLNGYRVRLRVVEEYDVALLAESPNDAKERAEADLRRGDQFEDIQDSWPEEIVSVEALAVELYQELE*
Ga0137377_114165741	3300012211	Vadose Zone Soil	RVVEEYDVALLARSAAEAKTRAEADVRGGEQFDAIQDSWPEEIVPVEALAAEPYPDLE*
Ga0137387_112485192	3300012349	Vadose Zone Soil	EEYDVALLAESHDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137372_101713002	3300012350	Vadose Zone Soil	GGIALSEKRQLNGYRVRLRIVEEYDVALAESPDDAKARAEADLRGGDQFEDSQDSWPEEIVSVEALAVEPYPELE*
Ga0137372_101903162	3300012350	Vadose Zone Soil	MAVSEERQLNGYRVRLCVVEEYDVALLAESPDDAEARAEADLRKGDQFEDIQDSWPEEFISVEALAVEPYPELE*
Ga0137372_103148461	3300012350	Vadose Zone Soil	VSEKRQPTGYRVRLRVVEEYDLALLAESPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137372_103378732	3300012350	Vadose Zone Soil	LLAESPGDAKAHAETDLRRGDEFEDIQESWSEEFVSVEALAVEPYPELE*
Ga0137372_110483011	3300012350	Vadose Zone Soil	VLAGIALSEERQVNGYRVRLRVVEEYDVAVLAESPDDARARAEADLRRGGQFEDIQDSWPEEVVSVVEALAVEPYPELE*
Ga0137372_111955881	3300012350	Vadose Zone Soil	VEEYDVAPMAESADDAKARAEVEVRRAGEFEDIQDTWPEEIISVEAVAVELYPDVE*
Ga0137386_101815372	3300012351	Vadose Zone Soil	VRLRVVEEYDVALLAESPDDANARAEADLRKADQFEDIQDSWPEEFISVEALAVEPYPELE*
Ga0137386_104609581	3300012351	Vadose Zone Soil	DFMCAALGGNAVSEKRQPNGYRVRLRVVEEYDVALLAESPDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137367_103380602	3300012353	Vadose Zone Soil	VGDVPEMKGYRVRLRVVEEYDVALLAGSAADAKARAEADVRRGEQFEAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0137367_108775572	3300012353	Vadose Zone Soil	VLVVGTEEPELKGYRVRLRVVEEYDVALLAESSEDAKARAEADIRGGGDFEAIQDSWPEEIVSVKAVAVERYP
Ga0137367_110387171	3300012353	Vadose Zone Soil	GGIALSEEPQLNGYRVRLRLVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137367_112125791	3300012353	Vadose Zone Soil	AGIALSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSIDALAVEPYPELE*
Ga0137366_101139094	3300012354	Vadose Zone Soil	LSEERQLNGCRVRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137366_103478401	3300012354	Vadose Zone Soil	MRLRPLGVLAVGTEEPELKGYRVRLRVVEEYDVALLADSPADAKARAEAEVRAGGEFEAIQDSWPEEIVSVDALAVEPYPDLE*
Ga0137366_105669292	3300012354	Vadose Zone Soil	LDEEPEVKGYRVRLRVVEEYDVALLAESSEDAKAQAEAEVRGGEFEAIQDSWPEEIVSVEAVAVEPYPDLE*
Ga0137366_111729802	3300012354	Vadose Zone Soil	VEEYDVALLAESHDDAKVRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137369_100543744	3300012355	Vadose Zone Soil	LLAESPDDAKAHAETDLRRGDEFEDIQESWPEEFVSVEALAVEPYPELE*
Ga0137369_102270833	3300012355	Vadose Zone Soil	MEGGMKGYRVRLRVVEEYDVALLAKSAEDAKARAEADVRGGVECESIEDSWPEQVVSVEALAVEPYPDLE*
Ga0137369_105286952	3300012355	Vadose Zone Soil	VRLRVVEEYDVALLARSAAEAKTRAEADVRGGEQFDAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0137371_103427632	3300012356	Vadose Zone Soil	MEGTMKGYRVRLRVVEEYEVALLAESAEDAKARAEADVCGGGEFESIEDSWPEQVVSVEALAVEPYPDLE*
Ga0137371_105433231	3300012356	Vadose Zone Soil	NDFMCAALGGNAVSEKRQPNGYRVRLRVVEEYDVALLAESPDDAKMRAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137371_109877631	3300012356	Vadose Zone Soil	LLARSATEAKSQAEADVRGGGQFEAIQDSWPEEIVSVEALAAEPYPDLE*
Ga0137371_114010772	3300012356	Vadose Zone Soil	LSEERQLNGYRMRLRVVEEYDVALLAESPDDAKARAEVDLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137384_109753032	3300012357	Vadose Zone Soil	ERGASVNGYRLQLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137368_100596773	3300012358	Vadose Zone Soil	MKGYRVRLRVVEEYDVALLARSAADAKTRAEADVRGGEQFEAIQDSWPEEIVSVDALAAEPYPDLE*
Ga0137368_103744522	3300012358	Vadose Zone Soil	HESDFICAGLAAGIAVSEKRQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADVRRGDQFEDIQDSWPEEIVSVGALAVESYPELE*
Ga0137368_104538732	3300012358	Vadose Zone Soil	LDEEPEVKGYRVRLRVVEEYDVALLAESFEDAKAQAEAEVRGGGQFEAIQDSWPEEIVSVEAVAVEPYPDLE*
Ga0137368_106394922	3300012358	Vadose Zone Soil	MKGCRVRLRVVEEYEVALLAESAEDAKARAEADVRGGGEFESIEDSWPEEVVSVEALAVEPHPDLE*
Ga0137368_109931101	3300012358	Vadose Zone Soil	LSAEAQLRGYRVRLRILEEYDVALLAESPDDAKARAEADVRRGEGFEDIQDSSPEERISVEALAVEPYPELE*
Ga0137368_110044431	3300012358	Vadose Zone Soil	NGYRVRLRVVEEYDVALLAESPNDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137385_114989331	3300012359	Vadose Zone Soil	VRLRVVEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEFISVEALAVEPYPELE*
Ga0137375_101038003	3300012360	Vadose Zone Soil	VGDVPEMKGYRVRLRVVEEYDVALLAGSAADAKARAEADVRGGEQFEAIQDSWPDEIVSVDALAAEPYPDLE*
Ga0137375_107138591	3300012360	Vadose Zone Soil	LSAEAQLRGYRVRLRILEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEFISVEALAVEPYPELE*
Ga0137375_107942311	3300012360	Vadose Zone Soil	VNDLPEMKGYRVRLRVVVEYDVALLARSATEAKARAEADVRGGEQSEAIQDSWPEEIVSVEALA
Ga0137375_113293252	3300012360	Vadose Zone Soil	VLVVGTEEPELKGYRVRLRVVEEYDVALLAESSEDAKARAEADIRGGGDFEAIQDSWPEEIVSIKAVAVEPYPDLE*
Ga0137361_109068703	3300012362	Vadose Zone Soil	LSEERQLKGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGERFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137390_100268611	3300012363	Vadose Zone Soil	VRLRVVEEYDVALLAESPDDAKARAEVDVRKGDQFEDIQDSWPEEVISVQALAVEPYPELE*
Ga0137373_100415987	3300012532	Vadose Zone Soil	AARAGIALSEERQLNGYRVRLRVVEEYDVALLADSPDDSKVRAETDLRRGDQFEDIQDSWPEEIVSVEALAVEPYAELE*
Ga0137373_101890942	3300012532	Vadose Zone Soil	MELLRRERGRVKLPEMKGYRVRLRVVEEYDVALLARSPAEAKTLAEADVRGGDQFDAIQDSWPEEIVSVEALTAEPYPDLE*
Ga0137373_101917152	3300012532	Vadose Zone Soil	LSEERQLSGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137373_106862021	3300012532	Vadose Zone Soil	GYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGERFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0137407_100589762	3300012930	Vadose Zone Soil	LNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRGGNQFEDIQDSWPEEVASVEALAAEPYPELE*
Ga0134087_106501191	3300012977	Grasslands Soil	RQLNGYRVRLRVVEEYDVALLAESPDDARARAEADLRRGEQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0168317_10176071	3300012982	Weathered Mine Tailings	DVALLADSPADAKARAEAEVREGGEFEAIQDSWPEKIVSVEALAVEPYPDLE*
Ga0120109_11558842	3300014052	Permafrost	VRLRVVEEYDVALLAESPDDAKARAEADLRRGDQFEDIQDSWPEEIVSVEALAVEPYPELE*
Ga0134079_104950872	3300014166	Grasslands Soil	VRLRVVEQYDGALLAESPDDAKARAEADVRRGEGFEDIQDSWPEERISVEALAVEPYPELE*
Ga0134085_101751142	3300015359	Grasslands Soil	VRLRVVEEYAVALLAESPDDAKARAEADLRKGDRFEDIQDSWPEEIVSVEALAVKPYPELD*
Ga0184605_100014209	3300018027	Groundwater Sediment	VRLRVVEEYDVALLAESPDDAKARAEADVRKNDQFEDIQDSWPEEVISVQALAVEPYPEL
Ga0184619_101458293	3300018061	Groundwater Sediment	QLRGYRVRLRIVEEHDVALLAESPDDAKARAEADVRRGDGFEDIQDSWPEERISVEALAVEPYPEPE
Ga0066669_108632912	3300018482	Grasslands Soil	VRLRVVEEYDVALLAESPDDAKARAEDLRRGDRFEDIQESWPEEIVSVEALAVEPYPELE
Ga0193731_11750201	3300020001	Soil	RVVEEYDVALLAESPDDAKARAEADVRKGDQFEDIQDSWPEEVISVQALAVEPYPELE
Ga0210382_105084181	3300021080	Groundwater Sediment	GEERQLNGYRVRLRVVEEYDVALLAESSDDTKARAEADLRRGEQFEDIQDSWPEEIVSVEALAVEPYPELE
Ga0193750_10493582	3300021413	Soil	LSDEPQLRGYRVRLRIVEEYDVALLAESPDDAKARAEADVRRGDGFDDIQDSWPEERISVEALAVEPYPELE
Ga0209802_10494922	3300026328	Soil	MCAALGGIALSEERQLNSYRVRLRVVEEYDVALLAESPDDAKARAEADLRKGDQFEDIQDSWPEEIVSVEALAVEPYPELE
Ga0209180_100462682	3300027846	Vadose Zone Soil	LSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEADLRRGEQFEDIQDSWPEEIVSIDALAVEPYPELE
Ga0209180_101432551	3300027846	Vadose Zone Soil	RHESDFRCAGPGGIAVSEERQLNGYRVRLRVVEEYDVALLAESPDDAKARAEVDVRKGDQFEDIQDSWPEEVISVQALAVEPYPELE
Ga0209701_106992842	3300027862	Vadose Zone Soil	VALLAESPDDAKARAEADLRRGEQFEDTQDSWPEEIVSIDALAVEPYPELE
(restricted) Ga0233417_102564961	3300028043	Sediment	EPELKGYRVRLRVVEEYDVALLAESLEDAKARAEADVRRGGEFGTIQDSWPEEIVSVEAVAVEPYPDLE
Ga0307299_102032901	3300028793	Soil	EEYDVALLAESPDDAKARAEADVRKNDQFEDIQDSWPEEVISVQALAVEPYPELE
Ga0307278_101084332	3300028878	Soil	VRLRVVEEYDVALLAESPDDAKARAEADVRKGDQFEDIQDSWPEEVISVQALAVEPYPEL
Ga0307374_100733831	3300031670	Soil	MRIICRVKASYSADDGMARKAAGLADVLHVKGYRVRLRVVEEYDVALLADSPADAKARAEAEVREGGEFEAIQDSWPEEIVSVEALAVEPYP
Ga0307374_103939842	3300031670	Soil	LKGYRVRLRVVEEYGVALLAESADDAKARAEVLARDGQGADAPADSWPEELVSVEAVAVEPYPDIE
Ga0307372_100661261	3300031671	Soil	MRIICRVKASYSADDGMARKAAGLADVLHVKGYRVRLRVVEEYDVALLADSPADAKARAEAEVREGGEFEAIQDSWPEEIVSVEALAVEPYPDLE
Ga0307373_102948751	3300031672	Soil	MKGYRVRFRVVEEYDVALLAESPDDAKARAEAEVRRGDDFEAIQDTWPEETVSVEAVGVEPYPDLE
Ga0310813_108994421	3300031716	Soil	MKGYRVRLRVVEEYDVALLAESAEDAKARAEADVRGGVEFESIEDSWPEQVVSVEALAVEPYPDLE
Ga0335078_1002101811	3300032805	Soil	VLLRSEEAEALPGYRVRLRVVEEYEVALLAESPDEARALAEAEIRGGGEFQAIQDSWPEEVVSVEAVAVEPYPDLE
Ga0334722_101364971	3300033233	Sediment	MARTEAGLADVSQMKGYRVRLRVVEEYDVALLADSLADAKARAEAEVRGGGEFEAIQDSWPEEIVSLEALAVEPYPDLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters