Metagenome / Metatranscriptome Family F047270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047270
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	41 residues
Representative Sequence	AAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ
Number of Associated Samples	128
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.33 %
% of genes near scaffold ends (potentially truncated)	96.00 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.000 % of family members)
Environment Ontology (ENVO)	Unclassified (25.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.71% β-sheet: 0.00% Coil/Unstructured: 60.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00679	EFG_C	16.67
PF00474	SSF	7.33
PF01979	Amidohydro_1	3.33
PF00710	Asparaginase	3.33
PF03144	GTP_EFTU_D2	3.33
PF00196	GerE	2.00
PF05360	YiaAB	2.00
PF10282	Lactonase	2.00
PF08327	AHSA1	1.33
PF01914	MarC	1.33
PF00400	WD40	1.33
PF13796	Sensor	0.67
PF01810	LysE	0.67
PF10604	Polyketide_cyc2	0.67
PF02894	GFO_IDH_MocA_C	0.67
PF09347	DUF1989	0.67
PF00016	RuBisCO_large	0.67
PF00005	ABC_tran	0.67
PF00830	Ribosomal_L28	0.67
PF13396	PLDc_N	0.67
PF00101	RuBisCO_small	0.67
PF12730	ABC2_membrane_4	0.67
PF00027	cNMP_binding	0.67
PF01656	CbiA	0.67
PF04341	DUF485	0.67
PF07681	DoxX	0.67
PF02775	TPP_enzyme_C	0.67
PF01569	PAP2	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	6.67
COG4298	Uncharacterized conserved protein, YiaAB domain	Function unknown [S]	2.00
COG4682	Uncharacterized membrane protein YiaA	Function unknown [S]	2.00
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	1.33
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	0.67
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.67
COG1850	Ribulose 1,5-bisphosphate carboxylase, large subunit, or a RuBisCO-like protein	Carbohydrate transport and metabolism [G]	0.67
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.67
COG3162	Uncharacterized membrane protein, DUF485 family	Function unknown [S]	0.67
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.67
COG4451	Ribulose bisphosphate carboxylase small subunit	Carbohydrate transport and metabolism [G]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
All Organisms	root	All Organisms	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
cellular organisms	root	All Organisms → cellular organisms	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.67 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.67 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.67 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.33 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.33 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.67 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.67 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	2.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.33 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.67 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.67 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.67 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	2.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.33 %
Actinomadura meyerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura meyerae	0.67 %
Micromonospora carbonacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora carbonacea	0.67 %
Streptacidiphilus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus albus	0.67 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig96600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
2170459002\|F0B48LX02H8KB8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300001593\|JGI12635J15846_10086294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2284	Open in IMG/M
3300004080\|Ga0062385_10767322	Not Available	628	Open in IMG/M
3300004152\|Ga0062386_101142140	Not Available	647	Open in IMG/M
3300005177\|Ga0066690_10882221	Not Available	573	Open in IMG/M
3300005332\|Ga0066388_107446509	Not Available	549	Open in IMG/M
3300005434\|Ga0070709_10315097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1146	Open in IMG/M
3300005439\|Ga0070711_101413565	Not Available	606	Open in IMG/M
3300005536\|Ga0070697_101229655	Not Available	668	Open in IMG/M
3300005541\|Ga0070733_11108879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300005602\|Ga0070762_10027889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	2998	Open in IMG/M
3300005602\|Ga0070762_10713467	Not Available	673	Open in IMG/M
3300005617\|Ga0068859_100144620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2452	Open in IMG/M
3300005764\|Ga0066903_100172808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3165	Open in IMG/M
3300005764\|Ga0066903_101059697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1490	Open in IMG/M
3300005764\|Ga0066903_107255448	Not Available	573	Open in IMG/M
3300005921\|Ga0070766_10119212	Not Available	1584	Open in IMG/M
3300005921\|Ga0070766_10719845	Not Available	676	Open in IMG/M
3300006046\|Ga0066652_101202658	Not Available	717	Open in IMG/M
3300006057\|Ga0075026_100525686	Not Available	685	Open in IMG/M
3300006173\|Ga0070716_100461378	Not Available	928	Open in IMG/M
3300006914\|Ga0075436_100119894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora carbonacea	1840	Open in IMG/M
3300007076\|Ga0075435_101637492	Not Available	565	Open in IMG/M
3300009623\|Ga0116133_1142311	Not Available	626	Open in IMG/M
3300009683\|Ga0116224_10371408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300009824\|Ga0116219_10245019	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009839\|Ga0116223_10042127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3030	Open in IMG/M
3300010360\|Ga0126372_12193527	Not Available	601	Open in IMG/M
3300010361\|Ga0126378_10216062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1999	Open in IMG/M
3300010379\|Ga0136449_101919679	Not Available	879	Open in IMG/M
3300010858\|Ga0126345_1152403	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300010861\|Ga0126349_1222731	Not Available	502	Open in IMG/M
3300011085\|Ga0138581_1145525	Not Available	685	Open in IMG/M
3300011270\|Ga0137391_10454387	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1089	Open in IMG/M
3300012209\|Ga0137379_10954417	Not Available	762	Open in IMG/M
3300012209\|Ga0137379_11079754	Not Available	708	Open in IMG/M
3300012351\|Ga0137386_10448512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300012357\|Ga0137384_10749969	Not Available	791	Open in IMG/M
3300012923\|Ga0137359_10778125	Not Available	830	Open in IMG/M
3300012924\|Ga0137413_11584108	Not Available	535	Open in IMG/M
3300013100\|Ga0157373_11516643	Not Available	512	Open in IMG/M
3300013104\|Ga0157370_12002806	Not Available	519	Open in IMG/M
3300013307\|Ga0157372_12813796	Not Available	558	Open in IMG/M
3300014501\|Ga0182024_12022294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300016294\|Ga0182041_12081824	Not Available	529	Open in IMG/M
3300016371\|Ga0182034_10397216	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300016404\|Ga0182037_10164759	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300016404\|Ga0182037_10473573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1045	Open in IMG/M
3300017822\|Ga0187802_10079900	Not Available	1219	Open in IMG/M
3300017926\|Ga0187807_1019064	Not Available	2112	Open in IMG/M
3300017926\|Ga0187807_1141710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300017926\|Ga0187807_1294448	Not Available	538	Open in IMG/M
3300017932\|Ga0187814_10232926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300017942\|Ga0187808_10475616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300017959\|Ga0187779_10036776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2832	Open in IMG/M
3300017966\|Ga0187776_11367927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	538	Open in IMG/M
3300017972\|Ga0187781_11317960	Not Available	533	Open in IMG/M
3300017973\|Ga0187780_10550125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300017974\|Ga0187777_11332784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300017975\|Ga0187782_11464564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300017993\|Ga0187823_10129890	Not Available	779	Open in IMG/M
3300018040\|Ga0187862_10597240	Not Available	654	Open in IMG/M
3300018060\|Ga0187765_10075972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1785	Open in IMG/M
3300018085\|Ga0187772_10535554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300018090\|Ga0187770_10988408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300020022\|Ga0193733_1095624	Not Available	831	Open in IMG/M
3300020583\|Ga0210401_11192619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300021374\|Ga0213881_10057239	Not Available	1655	Open in IMG/M
3300021401\|Ga0210393_10230862	Not Available	1499	Open in IMG/M
3300021402\|Ga0210385_10822586	Not Available	712	Open in IMG/M
3300021402\|Ga0210385_11170036	Not Available	590	Open in IMG/M
3300021403\|Ga0210397_10535687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300021560\|Ga0126371_11986079	Not Available	699	Open in IMG/M
3300021560\|Ga0126371_12885717	Not Available	583	Open in IMG/M
3300022709\|Ga0222756_1081819	Not Available	529	Open in IMG/M
3300025321\|Ga0207656_10286337	Not Available	813	Open in IMG/M
3300025905\|Ga0207685_10014181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2489	Open in IMG/M
3300025910\|Ga0207684_10054799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3383	Open in IMG/M
3300025915\|Ga0207693_10782547	Not Available	736	Open in IMG/M
3300025919\|Ga0207657_10015397	All Organisms → cellular organisms → Bacteria	7409	Open in IMG/M
3300025928\|Ga0207700_11207267	Not Available	675	Open in IMG/M
3300025929\|Ga0207664_11088747	Not Available	715	Open in IMG/M
3300027029\|Ga0208731_1000690	Not Available	2364	Open in IMG/M
3300027067\|Ga0208602_1013343	Not Available	857	Open in IMG/M
3300027527\|Ga0209684_1020699	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300027570\|Ga0208043_1060350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300027812\|Ga0209656_10076135	Not Available	1816	Open in IMG/M
3300027842\|Ga0209580_10567134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300027884\|Ga0209275_10027024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	2617	Open in IMG/M
3300027889\|Ga0209380_10338049	Not Available	884	Open in IMG/M
3300027889\|Ga0209380_10491794	Not Available	716	Open in IMG/M
3300028768\|Ga0307280_10011193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	2443	Open in IMG/M
3300028824\|Ga0307310_10683289	Not Available	526	Open in IMG/M
3300028906\|Ga0308309_10166364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	1788	Open in IMG/M
3300028906\|Ga0308309_10295412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura meyerae	1368	Open in IMG/M
3300028906\|Ga0308309_11333228	Not Available	616	Open in IMG/M
3300029943\|Ga0311340_10129232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2701	Open in IMG/M
3300029943\|Ga0311340_10716463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300029951\|Ga0311371_12094856	Not Available	595	Open in IMG/M
3300029997\|Ga0302302_1195831	Not Available	765	Open in IMG/M
3300030007\|Ga0311338_10764980	Not Available	967	Open in IMG/M
3300030046\|Ga0302305_1226613	Not Available	667	Open in IMG/M
3300030490\|Ga0302184_10119826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1169	Open in IMG/M
3300030490\|Ga0302184_10399976	Not Available	534	Open in IMG/M
3300030520\|Ga0311372_11451070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300030760\|Ga0265762_1111510	Not Available	617	Open in IMG/M
3300031234\|Ga0302325_10258859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2885	Open in IMG/M
3300031236\|Ga0302324_101112595	Not Available	1061	Open in IMG/M
3300031543\|Ga0318516_10372422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300031549\|Ga0318571_10141343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300031549\|Ga0318571_10286862	Not Available	615	Open in IMG/M
3300031573\|Ga0310915_10376418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300031679\|Ga0318561_10423751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300031682\|Ga0318560_10558229	Not Available	620	Open in IMG/M
3300031715\|Ga0307476_10280073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300031747\|Ga0318502_10029511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2755	Open in IMG/M
3300031769\|Ga0318526_10211286	Not Available	793	Open in IMG/M
3300031770\|Ga0318521_10116109	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300031770\|Ga0318521_10910835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300031778\|Ga0318498_10113800	Not Available	1230	Open in IMG/M
3300031778\|Ga0318498_10128732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300031782\|Ga0318552_10484001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300031798\|Ga0318523_10215692	Not Available	959	Open in IMG/M
3300031799\|Ga0318565_10468027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300031823\|Ga0307478_10435208	Not Available	1089	Open in IMG/M
3300031835\|Ga0318517_10033996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus albus	2065	Open in IMG/M
3300031890\|Ga0306925_11459974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300031894\|Ga0318522_10085041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1159	Open in IMG/M
3300031912\|Ga0306921_10180675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2473	Open in IMG/M
3300031912\|Ga0306921_11480695	Not Available	743	Open in IMG/M
3300031941\|Ga0310912_11323931	Not Available	546	Open in IMG/M
3300031945\|Ga0310913_10262861	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300031945\|Ga0310913_10509073	Not Available	855	Open in IMG/M
3300031947\|Ga0310909_10433115	Not Available	1104	Open in IMG/M
3300031947\|Ga0310909_11640538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300031981\|Ga0318531_10438331	Not Available	591	Open in IMG/M
3300032044\|Ga0318558_10098067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1369	Open in IMG/M
3300032054\|Ga0318570_10232598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300032055\|Ga0318575_10041018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2081	Open in IMG/M
3300032064\|Ga0318510_10255867	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032067\|Ga0318524_10016501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3228	Open in IMG/M
3300032068\|Ga0318553_10646579	Not Available	553	Open in IMG/M
3300032076\|Ga0306924_10335673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1733	Open in IMG/M
3300032089\|Ga0318525_10392116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300032160\|Ga0311301_10602448	Not Available	1583	Open in IMG/M
3300032160\|Ga0311301_11281993	Not Available	928	Open in IMG/M
3300032515\|Ga0348332_12440514	Not Available	512	Open in IMG/M
3300032782\|Ga0335082_10927538	Not Available	734	Open in IMG/M
3300034163\|Ga0370515_0255897	Not Available	742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.00%
Host-Associated	Host-Associated	5.33%
Engineered	Engineered	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.33%
Aquatic	Environmental → Aquatic	8.67%
Plants	Host-Associated → Plants	5.33%
Modeled	Engineered → Modeled	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.67%
Freshwater	Environmental → Aquatic → Freshwater	8.00%
Peat	Environmental → Terrestrial → Peat	7.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.33%
Sediment	Environmental → Aquatic → Sediment	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.67%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.67%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.67%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.33%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.67%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.67%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0599.00005810	2166559005	Simulated	VDSAAVTLDVPRVSLADAVRAMIRVAAEDPDDVLDRLRRDRDQ
E1_02382380	2170459002	Grass Soil	VALDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDK
JGI12635J15846_100862941	3300001593	Forest Soil	DQAAIALGVPRVSLADAVRAMIRVTADDPDQVLDRLRRDRDK*
Ga0062385_107673222	3300004080	Bog Forest Soil	WADEAAIALGVPRVSLADAVRAMIRVTADHPDQVLDRLRQDRDK*
Ga0062386_1011421401	3300004152	Bog Forest Soil	ADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRNQ*
Ga0066690_108822211	3300005177	Soil	WADSAAVTLDVPRVSLADAVRAMIRVAADDPDDVLDRLRRDRDR*
Ga0066388_1074465091	3300005332	Tropical Forest Soil	ADSAAVTLDVPRVSLADAVRAMIRVAADNPGDVIDRLRRDRDQ*
Ga0070709_103150971	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AWADAAAVSLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDREQ*
Ga0070711_1014135651	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LTAWADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVIDRLRRDRDR*
Ga0070697_1012296552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AWADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0070733_111088791	3300005541	Surface Soil	ADAAAVTLGVPRVSLADAMRAMIRVSADNPDEVLDRLRRDREP*
Ga0070762_100278893	3300005602	Soil	EAAIALGVPRVSLADAVRAMIRVTADHPDQVLDRLRRDREG*
Ga0070762_107134671	3300005602	Soil	AIALGVPRVSLADAVRAMIRVTADQPDQVLDRLRQDRDR*
Ga0068859_1001446202	3300005617	Switchgrass Rhizosphere	ADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0066903_1001728085	3300005764	Tropical Forest Soil	SAAIELDVPRVPLADAVRAMIRVSTESPGEVIERLRRDREQ*
Ga0066903_1010596972	3300005764	Tropical Forest Soil	LDVPRVALADAVRAMIRVSAENPEEVLERLRHDREL*
Ga0066903_1072554482	3300005764	Tropical Forest Soil	DVPRVSLADAVRAMIRVTAENPSEVLDRLRRDREP*
Ga0070766_101192121	3300005921	Soil	TGWADEAAIALGVPRVSLADAVRAMIRVTADQPDQVLDRLRQDRDK*
Ga0070766_107198453	3300005921	Soil	LNAWADSAAISLGVPRVSLAEAVRAMIRVAADDPEQVLDRLRHERSQ*
Ga0066652_1012026582	3300006046	Soil	LDVPRVSLADAVRAMIRVAAENPDDVLDRLRRDRRDQ*
Ga0075026_1005256862	3300006057	Watersheds	RIAVTLDVPRVSLADAVRAMIRVAADNPGDVLDRLRRDRDQ*
Ga0070716_1004613781	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0075436_1001198943	3300006914	Populus Rhizosphere	AVALDVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDS*
Ga0075435_1016374922	3300007076	Populus Rhizosphere	WADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0116133_11423112	3300009623	Peatland	AAAVTLDVPRVSLADAVRAMIRVAADDPGDVLDRLRRDREQ*
Ga0116224_103714081	3300009683	Peatlands Soil	IELGVPRVSLADAVRAMIRVTTDDPDQVLDRLRRDRGT*
Ga0116219_102450191	3300009824	Peatlands Soil	TLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0116223_100421274	3300009839	Peatlands Soil	WADSAAIELGVPRVSLADAVRAMIRVTTDDPDQVLDRLRRDRGT*
Ga0126372_121935272	3300010360	Tropical Forest Soil	DVPRVSLADAVRAMIRVAAENPDDVIERLRLDRDQ*
Ga0126378_102160623	3300010361	Tropical Forest Soil	ALGVPRVPLADAMRAMIRVTTENPGEVLDRLRRDRER*
Ga0136449_1019196791	3300010379	Peatlands Soil	AAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0126345_11524032	3300010858	Boreal Forest Soil	TLDVPRVSLADAVRAMIKVADDNPDDVIDRLRRDREQ*
Ga0126349_12227312	3300010861	Boreal Forest Soil	TAWADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDR*
Ga0138581_11455251	3300011085	Peatlands Soil	DVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0137391_104543871	3300011270	Vadose Zone Soil	ADSAAIALDVPRVPLADAVRAMIRVSAENPGEVLDRLRRDRER*
Ga0137379_109544172	3300012209	Vadose Zone Soil	AAVTLDVPRVSLADAVRAMIRVAADNPGEVLDRLRRDRD*
Ga0137379_110797542	3300012209	Vadose Zone Soil	WADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDREL*
Ga0137386_104485122	3300012351	Vadose Zone Soil	VDSAAVTLDVPRVSLADAVRAMIRVAADNPEDVLDRLRRDRDR*
Ga0137384_107499691	3300012357	Vadose Zone Soil	VTLDVPRVSLADAVRAMIRVAADNPGDVIDRLRRDRDR*
Ga0137359_107781252	3300012923	Vadose Zone Soil	LTAWADSAAVTLDVPRVSLADAVRAMIRVAADNPGDVLDRLRRDRDR*
Ga0137413_115841081	3300012924	Vadose Zone Soil	VTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDR*
Ga0157373_115166431	3300013100	Corn Rhizosphere	AVTLDVPRVSLADAVRAMIRVAADNPADVLDRLRRDRDQ*
Ga0157370_120028062	3300013104	Corn Rhizosphere	SAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ*
Ga0157372_128137961	3300013307	Corn Rhizosphere	VPRVSLADAVRALIRVAADNPDDVLDRLRRDRDQ*
Ga0182024_120222941	3300014501	Permafrost	ELDVPRVALADAMRAMIRVAAENPDAVIGQLRRDRE*
Ga0182041_120818242	3300016294	Soil	DSAAIELGVPRVSLADAVRAMIRVTTDHPDHVLDRLRQDRDK
Ga0182034_103972161	3300016371	Soil	DSAAVALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDREP
Ga0182037_101647591	3300016404	Soil	WTDSAAVALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDREG
Ga0182037_104735733	3300016404	Soil	MPVPRVSLADAVRAMIRVAAENPDDVIDRLRSDRDH
Ga0187802_100799002	3300017822	Freshwater Sediment	GWADAAAVTLGVPRVSLADAMRAMIRVSADNPDEVLDRLRRDREP
Ga0187807_10190641	3300017926	Freshwater Sediment	VWADSAAIELGVPRVSLADAVRAMIRVTTDHPDQVLDRLRRDRDK
Ga0187807_11417101	3300017926	Freshwater Sediment	VWADSAAIELGVPRVSLADAVRAMIRVTTDHPDQVLDRLRRDREK
Ga0187807_12944482	3300017926	Freshwater Sediment	AVELEVPRVPLADAMRAMIRVATDNPGEVLDRLRRDREQ
Ga0187814_102329261	3300017932	Freshwater Sediment	LDVPRVALADAVRAMIRVTTENPGQVLDRLRRDREQ
Ga0187808_104756161	3300017942	Freshwater Sediment	ELTVWADSAAIELGVPRVSLADAVRAMIRVTTDHPDQVLDRLRRDREK
Ga0187779_100367764	3300017959	Tropical Peatland	ELTVWTDSAAIELGVPRVSLAEAVRAMIRVTTDQPDPVLDRLRQDRDK
Ga0187776_113679272	3300017966	Tropical Peatland	ELYRELTVWADSAAIELGVPRVSLADAVRAMIRVTTDHPDRVLDRLRQDRDK
Ga0187781_113179601	3300017972	Tropical Peatland	DAAAVTLGVPRVSLADAMRAMIRVSADNPDEVLDRLRRDREP
Ga0187780_105501252	3300017973	Tropical Peatland	ADSAGIALGVPRVSLADAVRAMIRAAADNPDEVLDRLRRDRDR
Ga0187777_113327841	3300017974	Tropical Peatland	SAAIELGVPRVSLADAVRAMIRVTTDHPDQVLDQLRRDRGR
Ga0187782_114645642	3300017975	Tropical Peatland	IGWADAAAVTLGVPRVSLADAMRAMIRVSADNPDEVLDRLRRDREP
Ga0187823_101298902	3300017993	Freshwater Sediment	DSAAVTLDVPRVPLAEAVRAMIRVAADNPGDVIDRLRRDRHQ
Ga0187862_105972401	3300018040	Peatland	AVTLDVPRVSLADAVRAMIRVAADNPGDVIDQLRRDRDQ
Ga0187765_100759722	3300018060	Tropical Peatland	VWTDSAAIELGVPRVSLAEAVRAMIRVTTDQPDPVLDRLRQDRDK
Ga0187772_105355542	3300018085	Tropical Peatland	AIELGVPRVSLADAIRAMIRVTTDQPDPVLDRLRQDRDK
Ga0187770_109884081	3300018090	Tropical Peatland	IALGVPRVSLADAVRAMIRAAADNPDEVLDRLRRDRDR
Ga0193733_10956241	3300020022	Soil	SAAVTLDVPRVSLADAVRAMIRVAAENPDDVLDRLRRDRDQ
Ga0210401_111926192	3300020583	Soil	AAIELDVPRIALADAVRAMIRVTTESPDEVLDRLRRDRDQ
Ga0213881_100572391	3300021374	Exposed Rock	WADSAAVTLDVPRVSLADAVRAMIRVAADNPGDVLDLLRRDRDQ
Ga0210393_102308621	3300021401	Soil	DEAAIALGVPRVSLADAVRAMIRVTADDPDQVLDRLRQDRDK
Ga0210385_108225861	3300021402	Soil	DEAAIALGVPRVSLADAVRAMIRVTADQPDQVLDRLRQDRDK
Ga0210385_111700363	3300021402	Soil	DSAAVTLDVPRVSLADAVRAMIRVAADNPGDVLDRLRRDRDQ
Ga0210397_105356871	3300021403	Soil	RELTGWADEAAVALGVPRVSLADAVRAMIRVTADHPDQVLDRLRQDRDK
Ga0126371_119860791	3300021560	Tropical Forest Soil	QWADAAAVALDVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDN
Ga0126371_128857171	3300021560	Tropical Forest Soil	ADAAAVSLDVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDG
Ga0222756_10818192	3300022709	Soil	AIALGVPRVSLADAVRAMIRVTADDPDQVLDRLRQDRDK
Ga0207656_102863372	3300025321	Corn Rhizosphere	TLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ
Ga0207685_100141814	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	WAHSAAIELDVPRIALADAVRAMIRVTTESPDGVLDRLRRDRDQ
Ga0207684_100547991	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DVPRVSLADAVRAMIRVSAENPGEVLDRLRHDRQG
Ga0207693_107825471	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AWADAAAVSLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDREQ
Ga0207657_100153978	3300025919	Corn Rhizosphere	ADSAAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ
Ga0207700_112072671	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ
Ga0207664_110887471	3300025929	Agricultural Soil	DVPRVSLADAVRAMIRVAAENPDDVLDRLRRDRDQ
Ga0208731_10006903	3300027029	Forest Soil	VVVVAGELADAVRAMIRVAADNPGDVLDRLRRDRDQ
Ga0208602_10133431	3300027067	Forest Soil	LGVPRVSLADAVRAMIRVTTENPEDVLDRLRRDREA
Ga0209684_10206991	3300027527	Tropical Forest Soil	SAAVALDVPRVSLADAVRAMIRVTAEHPDDVLDRLRRDRDS
Ga0208043_10603502	3300027570	Peatlands Soil	ELNMWADSAAIELGVPRVSLADAVRAMIRVTADHPDQVLDRLRRDRGR
Ga0209656_100761352	3300027812	Bog Forest Soil	LTAWADSAAVTLDVPRVSLADAVRAMIRVAADNPGDVLDRLRSDRNQ
Ga0209580_105671342	3300027842	Surface Soil	AAAVTLGVPRVSLADAMRAMIRVSADNPDEVLDRLRRDREP
Ga0209275_100270243	3300027884	Soil	TGWADEAAVALGVPRVSLADAVRAMIRVTADHPDQVLDRLRRDREG
Ga0209380_103380491	3300027889	Soil	TGWADEAAIALGVPRVSLADAVRAMIRVTADQPDQVLDRLRQDRDR
Ga0209380_104917941	3300027889	Soil	ALGVPRVSLADAVRAMIRVTADHPDQVLNRLRQDRDR
Ga0307280_100111932	3300028768	Soil	DSAAVTLDVPRVSLADAVRAMIRVATDNPDDVLDRLRRDRDQ
Ga0307310_106832892	3300028824	Soil	LDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDM
Ga0308309_101663643	3300028906	Soil	AIALGVPRVSLADAVRAMIRVTADHPDQVLDRLRRDREG
Ga0308309_102954121	3300028906	Soil	VVLGVPRVSLADAVRAMIRVTADHPDQVLDRLRQDRDK
Ga0308309_113332281	3300028906	Soil	YRELTGWADEAAIALGVPRVSLADAVRAMIRVTADQPDQVLDRLRQDRDK
Ga0311340_101292323	3300029943	Palsa	ELGVPRVSLADAMRAMIRVTADDPDRVLDLLRKDRDK
Ga0311340_107164631	3300029943	Palsa	TGWADQAAIALGVPRVSLADAVRAMIRVTADDPDQVLDRLRQDRDK
Ga0311371_120948562	3300029951	Palsa	AAISLGVPRVSLADAVRAMIRVTTDKPEDVLDRLRRDREQ
Ga0302302_11958312	3300029997	Palsa	LTTWADSAAISLGVPRVSLADAVRAMIRVATEDPDDVLDRLRRDREQ
Ga0311338_107649802	3300030007	Palsa	AIALGVPRVSLADAVRAMIRVTTENPEDVLDRLRSDREQ
Ga0302305_12266132	3300030046	Palsa	LTRWVDEAAVELDVPRVALADAVRAMIRVTTENPDEVLDRLRRDRKR
Ga0302184_101198261	3300030490	Palsa	AIALGVPRVSLADAVRAMIRVTADDPDQVLDRLRRDRDK
Ga0302184_103999762	3300030490	Palsa	SAAIALGVPRVSLADAVRAMIRVTTENPEDVLDRLRRDRET
Ga0311372_114510702	3300030520	Palsa	DEAAVELDVPRVALADAVRAMIRVTTENPDEVLDRLRRDRER
Ga0265762_11115102	3300030760	Soil	ADSAAVTLDVPRLPLADAMRAMIRVTTEQPDAVLDRLRRDREP
Ga0302325_102588591	3300031234	Palsa	RWVDEAAVELDVPRVALADAVRAMIRVTTENPDEVLDRLRRDRER
Ga0302324_1011125951	3300031236	Palsa	WADSAAIALGVPRVSLADAVRAMIRVTTENPEDVLDRLRRDRET
Ga0318516_103724221	3300031543	Soil	WADSAAVALDVPRVPLADAMRAMIRVTAENPDEVLDRLRRDREQ
Ga0318571_101413432	3300031549	Soil	RPGPRVSLADAVRAMIRVTAENPGEVLDRLRRDRER
Ga0318571_102868622	3300031549	Soil	WADSAAVTLDVPRVSLADAVRAMIRVAADSPDDVIDRLRRDRDH
Ga0310915_103764183	3300031573	Soil	AVALDVPRVPLADAMRAMIRVTAENPDEVLDRLRRDREQ
Ga0318561_104237513	3300031679	Soil	AAVALDVPRVPLADAMRAMIRVTAENPDEVLDRLRRDREQ
Ga0318560_105582292	3300031682	Soil	QWTDSAAVALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDREP
Ga0307476_102800732	3300031715	Hardwood Forest Soil	VWADTAAITLGVPRVSLADAVRAMIRVTAEHPDQVLDRLRRDRDR
Ga0318502_100295114	3300031747	Soil	AAAIELGVPRVSLADAVRAMIRVTADHPDQVLDRLRQDRDNK
Ga0318526_102112862	3300031769	Soil	AWADSAAVTLDVPRVSLAAAVRAMIRVAADNPGDVLDRLRRDRDK
Ga0318521_101161091	3300031770	Soil	TQWTDSAAVALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDREP
Ga0318521_109108352	3300031770	Soil	ALDVPRVSLADAVRAMIRVTAENPDEVLDRLRRDRER
Ga0318498_101138001	3300031778	Soil	AWADSAAVTLDVPRVSLADAVRAMIRVAADSPDDVIDRLRRDRDH
Ga0318498_101287321	3300031778	Soil	DSAAIELGVPRVSLADAVRAMIRVTADDPDQVLDQLRRDRDK
Ga0318552_104840013	3300031782	Soil	LGVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDG
Ga0318523_102156921	3300031798	Soil	DVPRVSLADAVRAMIRVAAENPDDVIDRLRSDRDH
Ga0318565_104680273	3300031799	Soil	ADAAAVSLGVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDG
Ga0307478_104352082	3300031823	Hardwood Forest Soil	GVPRVSLADAMRAMIRVSADNPDEVLDRLRRDREP
Ga0318517_100339961	3300031835	Soil	AVSLDVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDG
Ga0306925_114599742	3300031890	Soil	YRQLTAWADSAAIELGVPRVSLADAVRAMIRVTADDPDQVLDQLRRDRDK
Ga0318522_100850411	3300031894	Soil	WADAAAVSLGVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDG
Ga0306921_101806755	3300031912	Soil	AAVALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDRER
Ga0306921_114806952	3300031912	Soil	DSAAVTLDVPRVSLADAVRAMIRVAADSPDDVIDRLRRDRDH
Ga0310912_113239311	3300031941	Soil	AWADSAAIELGVPRVSLADAVRAMIRVTADDPDQVLDQLRRGRDK
Ga0310913_102628612	3300031945	Soil	VALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDREP
Ga0310913_105090731	3300031945	Soil	AIALGVPRVSLADAVRAMIRVTADHPDQVLDRLRRDRDR
Ga0310909_104331152	3300031947	Soil	VWADSAAIELGVPRVSLADAVRAMIRVTADHPDQVLDQLRRDRDK
Ga0310909_116405382	3300031947	Soil	QLTQWADAAAVSLDVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDS
Ga0318531_104383311	3300031981	Soil	AVALDVPRVSLADAVRAMIRVTAENPGEVLDRLRRDREP
Ga0318558_100980671	3300032044	Soil	LIGWTDSAAIALGVPRISLADAVRAMIRVTAENPDKVLDRLRRDRDR
Ga0318570_102325981	3300032054	Soil	AAVTLGVPRVSLADAVRAMIRVSAENPGDVLDRLRRDRDS
Ga0318575_100410181	3300032055	Soil	ELIGWTDSAAIALGVPRISLADAVRAMIRVTAENPDKVLDRLRRDRDR
Ga0318510_102558671	3300032064	Soil	VSLDVPRVSLADAVRAMIRVSAENPGEVLDRLRRDRDG
Ga0318524_100165013	3300032067	Soil	VWADAAAIELGVPRVSLADAVRAMIRVTADHPDQVLDRLRQDRDNK
Ga0318553_106465791	3300032068	Soil	SAAVTLDVPRVSLAAAVRAMIRVAADNPGDVLDRLRRDRDK
Ga0306924_103356734	3300032076	Soil	AVALDVPRVSLADAVRAMIRVTAENPDEVLDRLRRDRER
Ga0318525_103921161	3300032089	Soil	ELGVPRVSLADAVRAMIRVTTDHPDQVLDQLRRGRDK
Ga0311301_106024481	3300032160	Peatlands Soil	GWADSAAIELGVPRVSLADAMRAMIRVTADDPDRVLDRLRQDRDK
Ga0311301_112819932	3300032160	Peatlands Soil	AAVTLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDRDQ
Ga0348332_124405142	3300032515	Plant Litter	ADSAAIELGVPRISLAAAVRAMIRVTSDQPDPVLDRLRQDRDK
Ga0335082_109275382	3300032782	Soil	VSLDVPRVSLADAVRAMIRVAADNPDDVLDRLRRDREQ
Ga0370515_0255897_631_741	3300034163	Untreated Peat Soil	LGVPRVSLADAVRAMIRVATENPEDVLDRLRRDRET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences