NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F046722

Metagenome Family F046722

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F046722
Family Type Metagenome
Number of Sequences 151
Average Sequence Length 70 residues
Representative Sequence MKSVLYLGCPALERADTERLLSAANVSVVWAENVPYALNELQRRDMPVLLDLSRGAAALQCAREIRN
Number of Associated Samples 129
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 27.40 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 91.39 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction Yes
3D model pTM-score0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.026 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(8.609 % of family members)
Environment Ontology (ENVO) Unclassified
(37.086 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(56.954 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114
1FACEORE_5699570
2L02_06172070
3F47_09888310
4FW301_10083893
5JGI1356J14229_100709534
6Ga0063454_1006245282
7Ga0062389_1046070461
8Ga0062595_1012608041
9Ga0066688_105180102
10Ga0066684_104553632
11Ga0070690_1002218223
12Ga0066388_1067935601
13Ga0068868_1002129021
14Ga0068868_1011979542
15Ga0070660_1002325273
16Ga0070689_1005003261
17Ga0070687_1002470671
18Ga0070671_1012120201
19Ga0070671_1020202571
20Ga0070674_1003374521
21Ga0070688_1001741343
22Ga0070709_111578161
23Ga0070709_113480882
24Ga0066689_103675981
25Ga0066681_100389601
26Ga0070685_111610561
27Ga0070706_1010620312
28Ga0070706_1013197541
29Ga0070706_1014945592
30Ga0070706_1015681332
31Ga0070698_1021180452
32Ga0070741_117584322
33Ga0070697_1009717271
34Ga0068853_1001042121
35Ga0070732_101984431
36Ga0070732_108375231
37Ga0070686_1004230261
38Ga0070704_1013953771
39Ga0066695_108682202
40Ga0066698_110452851
41Ga0070664_1008487721
42Ga0068854_1015652131
43Ga0068854_1017087712
44Ga0066654_100245474
45Ga0066706_107114421
46Ga0068852_1015891142
47Ga0068859_1002843661
48Ga0068864_1024640821
49Ga0068863_1004120631
50Ga0068860_1015299352
51Ga0075417_105923052
52Ga0075432_100341913
53Ga0068871_1014646791
54Ga0068871_1017242711
55Ga0066665_108405021
56Ga0066665_113043382
57Ga0075428_1006199991
58Ga0068865_1012089602
59Ga0075426_102889853
60Ga0075426_113904071
61Ga0075424_1003588121
62Ga0075436_1002521981
63Ga0075436_1003116542
64Ga0075419_106922502
65Ga0066710_1001735671
66Ga0066710_1037902671
67Ga0099827_108840051
68Ga0105240_109787482
69Ga0114129_103528701
70Ga0114129_106240773
71Ga0105243_104408741
72Ga0075423_130396942
73Ga0075423_132047091
74Ga0105238_103716253
75Ga0105854_13612111
76Ga0126382_113272771
77Ga0126377_119921792
78Ga0126379_110507022
79Ga0126379_131807791
80Ga0134126_109713312
81Ga0134121_129316342
82Ga0134123_109341382
83Ga0137393_116417412
84Ga0137364_114079601
85Ga0137376_114016511
86Ga0150985_1102761032
87Ga0150985_1203239371
88Ga0137366_111884762
89Ga0137369_102704531
90Ga0150984_1091936626
91Ga0137410_119664022
92Ga0164309_106654162
93Ga0164309_116935282
94Ga0163162_114028812
95Ga0182024_122531001
96Ga0157376_130103351
97Ga0137409_107848501
98Ga0182040_103659561
99Ga0184608_103106522
100Ga0187774_110727252
101Ga0193727_10928881
102Ga0193692_11210512
103Ga0193753_102425541
104Ga0179594_103739442
105Ga0210382_103301802
106Ga0247686_10188092
107Ga0209642_104718861
108Ga0209014_103070102
109Ga0207663_115417531
110Ga0207662_108835381
111Ga0207652_105935863
112Ga0207646_110604541
113Ga0207687_103374912
114Ga0207664_110078292
115Ga0207644_111432931
116Ga0207709_110245702
117Ga0207670_115929991
118Ga0207711_104532912
119Ga0207711_104961651
120Ga0207711_118520582
121Ga0207679_110119821
122Ga0207667_105832102
123Ga0207712_104271561
124Ga0207640_113569702
125Ga0207703_104497303
126Ga0207703_108192192
127Ga0207703_116119601
128Ga0207674_115826813
129Ga0207675_1004185642
130Ga0209855_10015881
131Ga0209848_10053321
132Ga0209234_11757493
133Ga0209265_10518191
134Ga0209686_11627671
135Ga0209647_13466792
136Ga0209811_100065081
137Ga0209590_107839841
138Ga0137415_111958861
139Ga0307312_103023132
140Ga0265320_104076791
141Ga0307506_105180161
142Ga0318528_105153091
143Ga0318560_105681131
144Ga0318502_105217261
145Ga0318520_106767522
146Ga0310890_114111281
147Ga0310895_107879921
148Ga0307471_1004590921
149Ga0307472_1020923451
150Ga0214472_110581612
151Ga0373950_0014147_1_231
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.95%    β-sheet: 15.79%    Coil/Unstructured: 45.26%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MKSVLYLGCPALERADTERLLSAANVSVVWAENVPYALNELQRRDMPVLLDLSRGAAALQCAREIRNSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.81
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
96.0%4.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Bog Forest Soil
Groundwater
Groundwater
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Surface Soil
Soil
Arctic Peat Soil
Soil
Grasslands Soil
Grass Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Peatland
Permafrost Soil
Permafrost
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Soil
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
4.6%7.3%7.3%3.3%7.3%5.3%4.6%5.3%8.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACEORE_56995702032320006SoilMKSVLYLGCPAPERADAEKQLGAVNVSVVWGENAAFALDELRQRNMPVLLDLSNGASALQIARE
L02_061720702170459007Grass SoilVKSVLYLGCPAPERADTERLLGAADVSVVWAENVPYALNELQRRDMPVLLDLSRGAAALQCAREIRNQRAATLMFAVVDSRRPDLTT
F47_098883102170459009Grass SoilMKSVLYLGCPXPERADAEKQLGAVNVSVVWGENAAFALNELRQRNMPVLLDLSNGASAL
FW301_100838933300000178GroundwaterMKSILYLGCPGSERADTEKILTSAGVSVLWADNVACALAELQKREVPVLVDLSRG
JGI1356J14229_1007095343300001380GroundwaterVKSILYLGCPASERADTEKQLGVADVSVVWADNVAYALTELQRHDMPVLLDLSRGAAALQGAREIR
Ga0063454_10062452823300004081SoilVKSILYLGCPQPERADAEKLLSAADLGVVWAENASSALDELRQRDMPVLLDLSRGVVALQIAHEIRTERAATLMFAVVDSRRPD
Ga0062389_10460704613300004092Bog Forest SoilMKSVLYVGCPNAERADAARQLEVADVAVVWADSVAYALTELQRRDMPVLLDLSRGAAALQIAREIRTQRASTLMFAVVDQRRPDLT
Ga0062595_10126080413300004479SoilMKPVVYLGCPPQERLETEKALGAAELAVVWADSVPLALAELQRRDVPVLLDLSRGAAALQSVRDIRSQRAS
Ga0066688_1051801023300005178SoilMKSVLYLGCPAAERADTERQLGIADVSVVWADNVSYALTELERRDMPVLLDLSRGAS
Ga0066684_1045536323300005179SoilMKSVLYLGCPLAERADAERQLGIADVSVVWADNISYALTELERREMPVLLDLSRGASALQIARELRTQRASTLMFAVVD
Ga0070690_10022182233300005330Switchgrass RhizosphereMKSVVYLGCPPQERLETEKALGAADVSVVWADSVPHALAELQRRDIPVLLDLSRGAAALQSVRDIRSQRASALLFAVV
Ga0066388_10679356013300005332Tropical Forest SoilMKSVLYLGCPGAERSDTEKLLGAADLSVIWADNVTNALTQLQHRDVPVLLDLSRGAAALQSAREIRSHRASTLMFAVVDARR
Ga0068868_10021290213300005338Miscanthus RhizosphereMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSNGASALQ
Ga0068868_10119795423300005338Miscanthus RhizosphereLKSILYLGCPASDRAETEKILATADLTVVWADGAASALNQLQRRDMPVLLDLSRGAAALEAARELRSQRAGTPMFAVVDGQ
Ga0070660_10023252733300005339Corn RhizosphereVKSVLYLGCPAAERAETEKLLAAARVSIVWADNVAYALSELHRRDMPVLLDLSRGASALQVARELRR
Ga0070689_10050032613300005340Switchgrass RhizosphereMKPVVYLGCPPQERLETEKALGAAELAVVWADSVPLALAELQRRDVPVLLDLSRGAAALQSVRDIR
Ga0070687_10024706713300005343Switchgrass RhizosphereMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMFAVVD
Ga0070671_10121202013300005355Switchgrass RhizosphereMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSNGA
Ga0070671_10202025713300005355Switchgrass RhizosphereMNPILYVGCPAAERADTEKLLAAANVSVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTER
Ga0070674_10033745213300005356Miscanthus RhizosphereVKSVLYLGCPAPERADTEKQLGAVDVSVVWGDNSTFALSELQRRNMPVLLDLSRGAAALQIAREIR
Ga0070688_10017413433300005365Switchgrass RhizosphereMKPVVYLGCPPQERLETEKALGAADVSVVWADTVPLALAELQRRDVPVLLDLSRGAAALQSVRDIRSQRASALLFAVV
Ga0070709_1115781613300005434Corn, Switchgrass And Miscanthus RhizosphereMKSVLYLGCPMAERADAERQLGIADVSVVWADNVSYALTELERRDMPVLLDLSRGA
Ga0070709_1134808823300005434Corn, Switchgrass And Miscanthus RhizosphereMKSVLYLGCPGPERADTERLLSAANVSVIWADNVAYALNELQRHDVP
Ga0066689_1036759813300005447SoilMKSVLYIGCPSSERADTEQLFASADLSVIWADNSAGAVAELQRRSDLPVLLDLSRGAGALQIARDLRE
Ga0066681_1003896013300005451SoilMKSVLYLGCPLAERADAERQLGIADVSVVWADNISYALTELERREMPVLLDLSRGASALQIARELRTQRASTLMFAVVDNHR
Ga0070685_1116105613300005466Switchgrass RhizosphereMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSNGASALQIARDIRSQRASTLMFAVVDSRRPDLTT
Ga0070706_10106203123300005467Corn, Switchgrass And Miscanthus RhizosphereVKSVLYLGCPASERADAEKLLGAANLAVVWADNVAYALAELQRRDMPVLVDLSRGAAALQIARDIRTQRATT
Ga0070706_10131975413300005467Corn, Switchgrass And Miscanthus RhizosphereMKSVLYLGCPPQERPETEKMLGTADIAVVWAETVALALSELQRREMPVLLDLSRGAAALQSARDIRSHRATTTIFAVV
Ga0070706_10149455923300005467Corn, Switchgrass And Miscanthus RhizosphereVSTKSILYLGCPSSERVETEQALGSAGVSVVWADTMTAALAELKRRDMPVLFDLTRGAAALQTAHDLRQQRPNTLAFAVV
Ga0070706_10156813323300005467Corn, Switchgrass And Miscanthus RhizosphereMKSILYLGCPPSERQETERVLSAASVSVLWAETLISALSELQRRDMPVLLDLSRGAAALQLARELRTE
Ga0070698_10211804523300005471Corn, Switchgrass And Miscanthus RhizosphereMKSVLYLGCPGPERADTERLLGAANVSVIWADNVAYALTELQRQDVPVLLDLSRGAAALQNAREIRNHRASTLMF
Ga0070741_1175843223300005529Surface SoilVKPVLYLGCPTAERGDTEKTLSAAGLSVVWAETVAHATHELQRRDMPVLLDLSRGVAALQLARDLRTERTSTLMF
Ga0070697_10097172713300005536Corn, Switchgrass And Miscanthus RhizosphereVKSVLYLGCPASERADAEKLLGAANVAVVWADNVAYALAELQRRDMPVLVDLSRG
Ga0068853_10010421213300005539Corn RhizosphereMKSVVYLGCPNVERTEAERTLAAAGVSVVFADNVALALTDVHRRDMPVLLDLSRGATALQHARELR
Ga0070732_1019844313300005542Surface SoilLYVGCPLSERAETEKVLATAHLSVVWADSAAYAFNELQRREMPVLLDLCRGAAALQIARELRAQRSATLMFAVVDARRPDLTVEAV
Ga0070732_1083752313300005542Surface SoilMSLNKSVLYLGCPISERADTEKVLGAASVSVVWVDNVNGALSELQRTNLPVLLDLSRGAAALQVARE
Ga0070686_10042302613300005544Switchgrass RhizosphereVKSVLYLGCPAPERADTEKQLGAVDVSVVWGDNSTFALSELQRRNMPVLLDLSRGAAALQIAREIRTQRAATLMFAVVDARRPDLTTEAVLA
Ga0070704_10139537713300005549Corn, Switchgrass And Miscanthus RhizosphereVKSILYLGCPASERLETERLLATASVSVIWAENVPFALSELQRRDMPVLLDLSRG
Ga0066695_1086822023300005553SoilLKSVLYLGCPGPERADAERLLGAANVSVIWADNVAYALSELQRKDVPVLLDLSRGAAALQHAREIRNHRASTLMFAVVDARRPDL
Ga0066698_1104528513300005558SoilMKSVLYLGCPPQERPETEKMFATADIAVVWADTVALALSELQRREMPVLLDLSRGAAALQSARDIRSH
Ga0070664_10084877213300005564Corn RhizosphereMKSSVLYLGCPVPERADTEKQLGAVDVSIVWAENATFALNELQRRNMPVLLDLS
Ga0068854_10156521313300005578Corn RhizosphereMNPILYVGCPAAERADTEKLLAAANVSVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARD
Ga0068854_10170877123300005578Corn RhizosphereMKSVLYLGCPTAERAEAEKILATASVSVVWADNVAYALNELQRHDMPVLLDLSRGAAA
Ga0066654_1002454743300005587SoilVKSVLYLGCPASERADTEKLLAAANVAVVWADNVAFALATLQRRDMPVLLDLSRGAAVMQIARDIRSQ
Ga0066706_1071144213300005598SoilLKSVLYLGCPASERADTEKLLAAANVAVVWADNVAFALATLQRRDMPVLLDLSRGAAVLQIVRDIRTQRADTL
Ga0068852_10158911423300005616Corn RhizosphereMKAVLYLGCPILERADTEKQLAAARVSIVWADSVAHALNELNRRDLPVLLDLSRGASALQAARDLRAQRSATLIF
Ga0068859_10028436613300005617Switchgrass RhizosphereMKPVLYLGCPAAERADVEKQLGAVNMSVVWGESAVSALNELQRRDMPVLLDLSRGAAALQIVREIRTQRA
Ga0068864_10246408213300005618Switchgrass RhizosphereMSQSILYLGCPVPERAETEKLLGAANVSVVWAENASFALTELEQKNMPVLLDLSRGAAALEIAREIRARRAATLIFAVVDAR
Ga0068863_10041206313300005841Switchgrass RhizosphereMTSVLYLGCPAPERADTEKQLSAANVAVVWGENVTFALTELQRRNMPVLLDLSHGAAALQIAREIRTQRASTLMFAVV
Ga0068860_10152993523300005843Switchgrass RhizosphereMKSVLYLGCPALERADTEKQLGAVDVAVVWAENAALALDELERRNMPVLLDLTRGAV
Ga0075417_1059230523300006049Populus RhizosphereMKPVVYLGCPPQERLETEKALGAADVSVVWTDSVPVALAELQRRDIPVLLDLSRGAAALQSVRDIRSQRASALLFAV
Ga0075432_1003419133300006058Populus RhizosphereVKSILYLGCPASERQETERLLASASVSVIWAENVPLALNELKRRDMPVLLDLSR
Ga0068871_10146467913300006358Miscanthus RhizosphereMQSVLYLGCPPPERSEAEKQLAGVDVSIVWAENATFALSELQRRNMPVLLDLSRGAAALQIAREIRTQRAS
Ga0068871_10172427113300006358Miscanthus RhizosphereMTTSVLYLGCPPPERPETEKLLEAANVGVVWADNVAYALSEL
Ga0066665_1084050213300006796SoilLKPVLYLGCPAPERLDTEKLLGAANLSVIWADNVACALSELQRQDLPVLLDLSRGAAALQHARDIRNQRGST
Ga0066665_1130433823300006796SoilLKSVLYLGCPASDRAETEKILATADLAVVWADGAASALNELQRRDMPVLFDLSRGAAALETARAVRTHRAGTPMF
Ga0075428_10061999913300006844Populus RhizosphereMKSVVYLGCPPHERLETEKALGAADVSVAWADSVPLALAELQRRDVPVLLDLSRGAAALQSVRDIRSQRA
Ga0068865_10120896023300006881Miscanthus RhizosphereVKSVLYLGCPSAERANTEKLLAAANVSVVWADTVTLALNELERRDMP
Ga0075426_1028898533300006903Populus RhizosphereMKSVLYLGCPMAERADAERQLGIADVAVVWADNVGYALTELERRDMPVLLDLSRGASALQLARELRT
Ga0075426_1139040713300006903Populus RhizosphereMNPILYVGCPAAERAETEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMFAVVDSRRPDL
Ga0075424_10035881213300006904Populus RhizosphereVKSVLYPGCPSSERAETEKLLGAADVAVVWADNVACALAELQRRDMPVLIDLSRGAAALQIARDIRTQRAAT
Ga0075436_10025219813300006914Populus RhizosphereVKSILYLGCPASERQETERLLAGASVSVIWAENVPFALNELKRRDMPVLLDLSRG
Ga0075436_10031165423300006914Populus RhizosphereVKSVLYLGCPSSERAETEKLLGAADVAVVWADNVACALAELQRRDMPVLIDLSRGAAALQIARDIRTHRAATLMFAVVDARRPDLTTDA
Ga0075419_1069225023300006969Populus RhizosphereMKPVVYLGCPPQERLETEKALGAADVSVVWTDSVPVALAELQRRDIPVLLDLSRGAAALQSVRDIRSQRASALLFAVVDGD
Ga0066710_10017356713300009012Grasslands SoilVERHSSNQQPATTSLKSVLYLGCPASERADTEKLLAAANVAVVWADNVAFALATLQRRDMPVLLDLSRGAAVLQIARDIRTQRADTLMFAVVDTRRPD
Ga0066710_10379026713300009012Grasslands SoilVKPILYVGCPATERGETEKILSAADVSVIWADNAAYALNELQRRDMPVLLDLSRGAAALQVARELRH
Ga0099827_1088400513300009090Vadose Zone SoilLKSVLYLGCPVPERADTERLLGAADVSVVWAENVPYALNELQRRDMPVLLDLSRGAAALQCAREIRNQRAAT
Ga0105240_1097874823300009093Corn RhizosphereMKSILYIGCPLSERADTEQLLASADLSVVWADNSAGAVAELQRRTDMSVLVDLSRGVGALQIARDLRE
Ga0114129_1035287013300009147Populus RhizosphereLKSVLYLGCPVSERQETERLLSAASVAVVWAENVTFALNELQRRDMPVLLDLCRGAAALQLAREIRAERAATLMFAVVD
Ga0114129_1062407733300009147Populus RhizosphereMRSVVYLGCPPHERLETEKALGAADVSVAWADSVPLALAELQRRDVPVLLDLSRGAAALQSVRDI
Ga0105243_1044087413300009148Miscanthus RhizosphereVKSVLYLGCPASERDDTEKQLGVADVSVVWADDVAYALTELQQRDMPVLLDLSRGVAALQLASELRMHRASTLMFAVVDAR
Ga0075423_1303969423300009162Populus RhizosphereMKSILYLGCPGSERADTEKILTSAGVSVLWADNVACALAELQKREVPVLVDLSRGAA
Ga0075423_1320470913300009162Populus RhizosphereMKPVVYLGCPPQERLETEKALAAADVSVVWADSVPLALAELQRRDVPVLLDLSRGAAA
Ga0105238_1037162533300009551Corn RhizosphereMAMKSVLYLGCPAAERPDIEKLLAAVRVGIVWGDTVAQALAELN
Ga0105854_136121113300009660Permafrost SoilMTSVLYLGCPALERADAEKVLGAVDVAVVWSENASLALTELQRHNMPVLLDLSCGAA
Ga0126382_1132727713300010047Tropical Forest SoilMASRVRSILYLGCPSSERAETEKLLGAANVSVLWAENVAYALSELQRRDVPVLLDLSRGAAALQNAR
Ga0126377_1199217923300010362Tropical Forest SoilMKSVLYLGCPGAERSDTEKLLGAADLSVIWADNVTNALTQLQHRDVPVLLDLSRGAAALQSA
Ga0126379_1105070223300010366Tropical Forest SoilMKSVLYLGCPGPERPDTEKLLGAANLSVIWADNVTYALNELQRRDVPVLLDLSRGA
Ga0126379_1318077913300010366Tropical Forest SoilMKSVLYLGCPAAERAATEQQLDAVNVSVVWGENAAFALNELRVRNMPVLLDLCNGASALQIARDIRSQRA
Ga0134126_1097133123300010396Terrestrial SoilVKSVLYLGCPAAERAETEKLLAAARVSIVWADNVAYALSELHRRDMPVLLDLS
Ga0134121_1293163423300010401Terrestrial SoilMNPILYVGCPAAERAETEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRSERASTLMF
Ga0134123_1093413823300010403Terrestrial SoilMTKATGISWRCAIKSILYLGCPTLERVDTEKLLGAANLSVIWADNVAYALSELQRQDLPVLLDLSKGAAALQHAR
Ga0137393_1164174123300011271Vadose Zone SoilMKSVLYLGCPALERADTERLLSAANVSVVWAENVPYALNELQRRDMPVLLDLSRGAAALQCAREIRN
Ga0137364_1140796013300012198Vadose Zone SoilLKSVLYLGCPSSERADTEKVLASANVAVVWADNVSYALNELRRHDMPVLLDLSRGAGALQVAREIRTERASTLMFAVVDPR
Ga0137376_1140165113300012208Vadose Zone SoilLKSVLYLGCPSSERADTEKVLASANVAVVWADSVSYALNELRRHDMPVLLDLSRGAGALQVAREIRTERASTLMFAVVDA
Ga0150985_11027610323300012212Avena Fatua RhizosphereMTSVLYVGCPAPERDDTERQLGTVDVSVIWADNASLALNELQRRNMPVLLDLSRGAAALQFAREIRTHRASTLMFAVVDARRPDMT*
Ga0150985_12032393713300012212Avena Fatua RhizosphereMKSVLYLCCPPHERAETEQQLGAAGVSALWGDTAAFALNELQQRNVPV
Ga0137366_1118847623300012354Vadose Zone SoilMKFVLYLGCPPQERLETEKALGTADVSVVWADTVPLALGELQGREMPVLLDLSRGAAALQNVREIRAQRPSALLFAVVDSRRPDL
Ga0137369_1027045313300012355Vadose Zone SoilMKSVLYLGCPPQERPESEKTLATADIAVVWADTVALALSELQRREMPVLLDLSRGAAALQSARD
Ga0150984_10919366263300012469Avena Fatua RhizosphereMKPIIYLGCPPPERADAELQLSAFDVSVVWGDNAAFALDQLRLRNMPVLLDLARGAAALQIAAEIRTQRASTLMFAV
Ga0137410_1196640223300012944Vadose Zone SoilLKSVLYLGCPASDRAETEKILATANLAVVWADGAASALNELQRRDMPVLFDLSRGAAALETARELRTHRASTPMFAVVDSHRPELTTEAVVAG
Ga0164309_1066541623300012984SoilMTSVLYLGCPAPERADTEKQLGDVDVAVVWGENASFALTELQRRNMPVLLDLSKGAAALQIAREIRTQRASTLMFAVVDARRPDLTTEAVL
Ga0164309_1169352823300012984SoilMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERAS
Ga0163162_1140288123300013306Switchgrass RhizosphereVKSVLYLGCPAPERADTEKQLGAVDVSVVWGDNSTFALSELQRRNMPVLLDLSRGAAALQIAREIRTQRAATLMFAVVDARRPDLTTEA
Ga0182024_1225310013300014501PermafrostVRAVLYLGCPSAERANTEKVLAAANVSVVWADTVAYALNQLEHRDMPVLLDLSKGAA
Ga0157376_1301033513300014969Miscanthus RhizosphereMKSVLYLGCPAPERADAEKQLGAVNVSVVWGENAAFALDELRQRNMPVLLDLSNGASALQIAR
Ga0137409_1078485013300015245Vadose Zone SoilVKSILYLGCPASERHETERLLADASVSVIWAENVPFALSELQRRD
Ga0182040_1036595613300016387SoilLKSVLYLACPAPERADTEQLLAAAGVSVVWADTVAGALNELQRHDLPVL
Ga0184608_1031065223300018028Groundwater SedimentLKSVLYLGCPAPERLDTEKLLGAANLSVIWADNVAYALSELQRQDVPVLLDLSRGAAALQHAREIRNQRASTLMFAVVDTRRPDLTTE
Ga0187774_1107272523300018089Tropical PeatlandLKSILYLGCPASERPDTEKLLSAANVSVVWADSAAYALSEL
Ga0193727_109288813300019886SoilMKSVLYLGCPAPERADTEKQLGTVDVSVVWGDNAAFALDELERRNMPVLLDLS
Ga0193692_112105123300020000SoilMTSVLYLGCPAPERADTEKQLGDVDVAVVWGENASFALTELQRRNMPVLLDLSKGAAALQIAREIRTQRASTLMFAVV
Ga0193753_1024255413300020034SoilVTSVLYLGCPGPERADTEKQLSAVEVSVVWGENAAFALNELQRRNMPVLLDLSRGAAALQIAREIR
Ga0179594_1037394423300020170Vadose Zone SoilMKSVLYVGCPPQERIETEKMLGAADLAVVWADNAPSALAELQRRDMPVLLDLTRGAAA
Ga0210382_1033018023300021080Groundwater SedimentMTTPTSVLYLGCPAPERADAEKLLAAADVSIVWADNAPFVLTELERHNMPVLLDL
Ga0247686_101880923300024177SoilMTTSVLYLGCPPPERPETEKLLEAANVGVVWADNVAYALSELQRHDMPVL
Ga0209642_1047188613300025167SoilMTSLAVKDPPLLKSVLYLGCPPAERAETETQLAAESMSIVWADNVNFAITELQRRDMPVLLDLSRGAAALQAARELRSHRAATLMFAVVD
Ga0209014_1030701023300025857Arctic Peat SoilLTSILYLGCPAQERAETEQVLAAASLAVVWADTASTALSELQRHDMPVLLDLSRGAAALQIARELHDDRAATLIFAVVDPRRPDLTT
Ga0207663_1154175313300025916Corn, Switchgrass And Miscanthus RhizosphereMKNVLYIGCPASERADTEQLLASADFSVVWADSSAGAVAELQRRTDMPVLLDLSRGAGALQIARDLREHRPGV
Ga0207662_1088353813300025918Switchgrass RhizosphereMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMFAVVDS
Ga0207652_1059358633300025921Corn RhizosphereVKSVLYLGCPAAERAETEKLLAAARVSIVWADNVAYALSELHRRDMPVL
Ga0207646_1106045413300025922Corn, Switchgrass And Miscanthus RhizosphereVKSILYLGCPASERLETERLLATASVSVIWAENVPFALSELQRRDMPVLLDLSRGAAALQIARELRSERSSTLMFAVVDPRRPDLT
Ga0207687_1033749123300025927Miscanthus RhizosphereMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMF
Ga0207664_1100782923300025929Agricultural SoilMKSVLYLGCPAAERAETERLLAVESVSIVWADSVAYALNELQRRDMPVLLDLSKGAAALQVAREL
Ga0207644_1114329313300025931Switchgrass RhizosphereMNPILYVGCPAAERADTEKLLAAANVSVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTE
Ga0207709_1102457023300025935Miscanthus RhizosphereMTSVLYLGCPAAERPETERILAQASVSVVWADNIGYALVELERRELPVLLDLSRGDAALQTAREL
Ga0207670_1159299913300025936Switchgrass RhizosphereMTSVLYLGCPAGERDDAEKLLRAAQLSVVWADDVSYALDELQRRDMPVLLDLSRGAAALQLAQEIRACRASTLMFAVKSEGSWKLSRFTRTG
Ga0207711_1045329123300025941Switchgrass RhizosphereMNPILYVGCPAAERAETEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIA
Ga0207711_1049616513300025941Switchgrass RhizosphereLKSILYLGCPASDRAETEKILATADLTVVWADGAASALNQLQRRDMPVLLDLSRGAAAL
Ga0207711_1185205823300025941Switchgrass RhizosphereMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMFAVVDSRRPDLTTEA
Ga0207679_1101198213300025945Corn RhizosphereMTKSVLYLGCPAAEKAETEQQLGAASVGVVWGDTPQFALDELARRNVPVLLDLARGAASLQVGRE
Ga0207667_1058321023300025949Corn RhizosphereMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMFAVVDSRR
Ga0207712_1042715613300025961Switchgrass RhizosphereMTSVLYLGCPASDRAETEKILATADLTVVWADGAASALNQLQRRDMPVLLDLSRGAGALEAAR
Ga0207640_1135697023300025981Corn RhizosphereMKSVLYLGCPTAERAEAEKILATASVSVVWADNVAYALNELQRHDMPVLLDLSRGAAALQVARELRNERAATLMFAVAD
Ga0207703_1044973033300026035Switchgrass RhizosphereMKPVVYLGCPPQERLETEKALGAAELAVVWADSVPLALAELQRRDVPVLLDLSRGAAALQSVRDIRSQRASA
Ga0207703_1081921923300026035Switchgrass RhizosphereLKSILYLGCPASDRAETEKILATADLTVVWADGAASALNQLQRRDMPVLLDLSRGAAALEAARELRSQRAGTPMFAVVDGQRPELT
Ga0207703_1161196013300026035Switchgrass RhizosphereMKPVVYLGCPPQERLETEKALGAADVSVVWADTVPLALAELQRRDVPVLLDLSRGAAALQ
Ga0207674_1158268133300026116Corn RhizosphereVPERADTEKQLGAVDVSIVWAENATFALNELQRRNMPVLLDLSRGAAALQIAREIRTQRASTLMFAVVDARRPDLT
Ga0207675_10041856423300026118Switchgrass RhizosphereLKSILYLGCPASDRAETEKILATADLTVVWADGAASALNQLQRRDMPVLLDLSRGAAALEAARELRSQRAGTPMFAVVDGQRPEL
Ga0209855_100158813300026220Permafrost SoilMTSVLYLGCPALERADAEKVLGAVDVAVVWAENASLALTELQRHNMPVLLDLSCGAAA
Ga0209848_100533213300026221Permafrost SoilMTSVLYLGCPALERADTEKQLGAVDVSVVWAENATLALDELERRNMPVLLDLTRGAAALQIAREIRTQRASTLMFAVVDARRPDLT
Ga0209234_117574933300026295Grasslands SoilLGCPASERADTEKLLAAANVAVVWADNVAFALATLQRRDMPVLLDLSRGAAVLQIARDIRTQRADTLMFAV
Ga0209265_105181913300026308SoilVKSVLYLGCPASERADTEKLLAAANVAVVWADNVAFALATLQRRDMPVLLDLSRGAAVMQIARDIRSQRADT
Ga0209686_116276713300026315SoilMKSVLYLGCPAAERADTERQLGIADVSVVWADNVSYALTELERRDMPVLLDLSRG
Ga0209647_134667923300026319Grasslands SoilMKSVLYLGCPLAERADAERQLGIADVSVVWADNISYALTELERREMPVLLDLSRGASALQIARELRTQRASTLMFAVVDNHRP
Ga0209811_1000650813300027821Surface SoilMTSVLYLGCPAPERADTEKQLGDVDVAVVWGENASFALTELQRRNMPVLLDLSRGAAALQIAREIRTQRAATLMFAVVDARRPDLTTEA
Ga0209590_1078398413300027882Vadose Zone SoilVPERADTERLLGAADVSVVWAENVPYALNELQRRDMPVLLDLSRGAAALQCAREIRNQRA
Ga0137415_1119588613300028536Vadose Zone SoilMTSVLYLGCPAPEREDTEKQLSAADVAVVWGENATFALTELQRRNMPVLLDLSRGAAALQIAREIRTQRASTLMFAV
Ga0307312_1030231323300028828SoilMNQLMKSVLFLGCPMPDRAETERALSTAGLSVVWADSPQIALGELQRRDIPVLLDLSGGAAALHAARDLRSERGSALIFAVVD
Ga0265320_1040767913300031240RhizosphereVKPVLYLGCPAAERAATEALLATANLSVRWAENAAGASAELQKSDMPVLLDLSRGAAALQIARDLRAQ
Ga0307506_1051801613300031366SoilMKSVLYLGCPAPERADTEKLLGAVDVSVVWAENATFALNELQRRDMPVLLDLSRGAA
Ga0318528_1051530913300031561SoilMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSSGASALQ
Ga0318560_1056811313300031682SoilMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSSGASALQIARDIRSQRASTLMFAVVDSRRP
Ga0318502_1052172613300031747SoilMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSS
Ga0318520_1067675223300031897SoilMKSVLYLGCPAAERAATEKQLDAVNVSVVWGENATFALNELRVRNMPVLLDLSSGASALQIARDIRSQRASTLMFAVVDSRRPD
Ga0310890_1141112813300032075SoilMKPVVYLGCPPQERLETEKALGAADLSVVWADSVPLALAELQRRDVPILLDLSRGAAAL
Ga0310895_1078799213300032122SoilMKSVLYLGCPASERADAEIQLAAESVTIVWADNVTHALNELERRDMPVLLDLSRGAAALQGALELRTQRAAT
Ga0307471_10045909213300032180Hardwood Forest SoilMLEARTATHAQAVLYLGCPPSERPETERQLATASVSVVWADNVAYALSEQQRRDIPVLLDLSPGASALQTARELRAQRAPT
Ga0307472_10209234513300032205Hardwood Forest SoilMTTSVLYLGCPAPERPETEKLLEAANVGVVWADNVAYALSELQRHDMPVLLDLSRGAAALQSAREIRTQRASTLMF
Ga0214472_1105816123300033407SoilVNSILYLGCPDGERIETERALAAASVSVVWADNVSYAVSQLQRRDMP
Ga0373950_0014147_1_2313300034818Rhizosphere SoilMNPILYVGCPAAERADTEKLLAAADVTVVWAESMAYVVHELQRRDMPVLLDLSRGAAALQIARDLRTERASTLMFAV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.