NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F046553

Metagenome Family F046553

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F046553
Family Type Metagenome
Number of Sequences 151
Average Sequence Length 73 residues
Representative Sequence REGLLASPLWMGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFPIGQSAT
Number of Associated Samples 129
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 10.60 %
% of genes near scaffold ends (potentially truncated) 81.46 %
% of genes from short scaffolds (< 2000 bps) 88.74 %
Associated GOLD sequencing projects 121
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.026 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(16.556 % of family members)
Environment Ontology (ENVO) Unclassified
(27.815 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.669 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114
1GPKC_03145300
2BSRL3_00292190
3E4A_10429440
4E4A_12341510
5L01_03979760
6N56_04637310
7FA3_01956660
8ICChiseqgaiiDRAFT_04686301
9JGI11643J12802_102608411
10JGI10214J12806_106901901
11JGI25404J52841_100699532
12Ga0066398_101462322
13Ga0063356_1008453834
14Ga0062595_1012978162
15Ga0062592_1026275512
16Ga0066395_109716322
17Ga0066672_101605112
18Ga0066688_105260692
19Ga0066676_104775331
20Ga0066675_102896391
21Ga0070683_1000185605
22Ga0070683_1017462142
23Ga0066388_1000635124
24Ga0066388_1074059711
25Ga0068869_1006027421
26Ga0070660_1008489991
27Ga0070673_1012645791
28Ga0070667_1017333342
29Ga0070714_1012973012
30Ga0070711_1015650871
31Ga0070700_1002051971
32Ga0066689_104110351
33Ga0066681_102825061
34Ga0066687_100105514
35Ga0066687_104600282
36Ga0070663_1012146212
37Ga0070663_1019871882
38Ga0070707_1001431432
39Ga0070698_1002799652
40Ga0070695_1002698902
41Ga0066692_104559691
42Ga0066692_107351911
43Ga0066699_101799943
44Ga0066694_102828072
45Ga0068857_1020925462
46Ga0066654_106123472
47Ga0066903_1000249377
48Ga0066903_1011936311
49Ga0066903_1021620902
50Ga0066656_107434152
51Ga0066652_1003259533
52Ga0066652_1003853282
53Ga0070716_1015264251
54Ga0066653_103153182
55Ga0075433_107112231
56Ga0075424_1005236261
57Ga0099791_105831592
58Ga0099828_116315522
59Ga0066709_1032128493
60Ga0099792_106565662
61Ga0114129_128130341
62Ga0105243_111966331
63Ga0111538_104506913
64Ga0105237_124149651
65Ga0126382_116048061
66Ga0134082_103649391
67Ga0126372_132430362
68Ga0126378_131668221
69Ga0126377_103786532
70Ga0126379_103772983
71Ga0126379_115467402
72Ga0126379_128029611
73Ga0126379_129685461
74Ga0134128_115654552
75Ga0126381_1002652841
76Ga0126381_1031670961
77Ga0126383_121509222
78Ga0126383_131484742
79Ga0118733_1002097431
80Ga0137364_100464703
81Ga0137382_103217082
82Ga0137382_111369992
83Ga0137382_112826122
84Ga0137363_110124352
85Ga0137376_113507351
86Ga0137366_100146881
87Ga0137371_109300842
88Ga0137384_103228373
89Ga0137397_105594012
90Ga0137407_108065352
91Ga0126375_101211221
92Ga0126369_136823302
93Ga0134110_105038142
94Ga0164308_120095011
95Ga0164307_118820321
96Ga0157374_113511642
97Ga0157374_126702991
98Ga0157378_103997591
99Ga0157375_106735861
100Ga0134089_101405912
101Ga0182034_100640441
102Ga0182037_100536363
103Ga0187825_101033223
104Ga0187785_102332921
105Ga0187779_100561081
106Ga0187778_100813301
107Ga0184618_101073542
108Ga0066669_120227851
109Ga0193747_11026361
110Ga0193727_10909622
111Ga0193718_10765051
112Ga0193731_11141612
113Ga0193730_11910502
114Ga0210407_107400171
115Ga0193709_10891712
116Ga0126371_106248661
117Ga0207688_110786841
118Ga0207685_104019701
119Ga0207699_107811481
120Ga0207693_108487481
121Ga0207646_100839084
122Ga0207646_112578432
123Ga0207687_110401531
124Ga0207709_112494642
125Ga0207661_100748651
126Ga0207668_103566212
127Ga0207703_101066971
128Ga0209055_11736232
129Ga0209153_10200012
130Ga0209803_11195813
131Ga0209577_107370452
132Ga0209283_105229871
133Ga0268264_109852401
134Ga0307282_101923143
135Ga0307282_106499241
136Ga0307290_103248231
137Ga0307312_106732311
138Ga0307308_100687132
139Ga0170824_1186838311
140Ga0170824_1201766642
141Ga0170820_103013892
142Ga0170818_1048713873
143Ga0170818_1056759422
144Ga0318573_107644601
145Ga0318520_107220141
146Ga0306923_107467361
147Ga0310913_106561671
148Ga0310913_108087862
149Ga0310909_115025592
150Ga0318533_112465752
151Ga0306924_107398281
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.42%    β-sheet: 0.00%    Coil/Unstructured: 57.58%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070REGLLASPLWMGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFPIGQSATSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
96.0%4.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Marine Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Grass Soil
Switchgrass Rhizosphere
Soil
Soil
Grasslands Soil
Grass Soil
Soil
Forest Soil
Soil
Tropical Peatland
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
8.6%9.9%9.9%16.6%4.6%3.3%4.6%7.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPKC_031453002067725004SoilLLKPALWLGWEQVMMNHFGAPGGKALWKERSYLFGEEFRRYIENDVMTREPHPDAKPMGAFPIGQSAT
BSRL3_002921902124908021Switchgrass RhizosphereLSYSQNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIESDLMKRQPHPDAKPMGAFAIGQSAK
E4A_104294402170459003Grass SoilNAFLRWRERSLAPPLWMGGESVIMNLVCAPGAKSFWKDRGYMFAEEFRHYVEDDLMKRTPHPDAKPMG
E4A_123415102170459003Grass SoilPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIEDDLMKREPHPDAKPMGAFSIAQAQSN
L01_039797602170459006Grass SoilMGWEHVIMNLVGAPGGKAFWKDRAYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIAQARSN
N56_046373102170459012Grass SoilWREGLLASPLWMGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIAQAQSN
FA3_019566602170459023Grass SoilSRRRCGWAGEHVIMNLVGAPGGKAFWKDRAYMFGDEFRRYIETDLMNREPHPDAKPMGAFSLGRSAEQESVR
ICChiseqgaiiDRAFT_046863013300000033SoilSYSQNAFLKWREELLASPLWLGWEQVMMNLFGAPGGKAFWKDRAYMFGGEFRQYIENDLIKRQPHPDAXXXGVFSIGRSAGQESAR*
JGI11643J12802_1026084113300000890SoilWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRYIETDLMKREPHPDAKPMGAFSLGRSAE*
JGI10214J12806_1069019013300000891SoilWLGWEQVIMNLVCSPGGKGLWKERSYLFGEEFRRYVEEDLMKRTPHPEAKPFGAFSIAGQPQ*
JGI25404J52841_1006995323300003659Tabebuia Heterophylla RhizosphereAFLKWREGLLKPALWLGWEQVMMNLFGAPGGKVFWKERGYLFGEEFRRYIENDLMKRTPHPDAKPLGAFRISQAESN*
Ga0066398_1014623223300004268Tropical Forest SoilLGWEQVMMNLFGAPGGKALWKERSYLFGEEFRRYIEDDLMKREPHPDAKPMGAFSIGRSAEQEPAG*
Ga0063356_10084538343300004463Arabidopsis Thaliana RhizosphereWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRYIETDLMKRKPHPDAKPMGAFSLGAHAEEKR*
Ga0062595_10129781623300004479SoilAFLKWREGLLASPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGDEFRRYVESDLMKREPHPDAKPMGAFPIGQSAT*
Ga0062592_10262755123300004480SoilQNAFLKWREGLLALPLWMGWEHVILNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKREPHPDAKPMGAFRIGQPTG*
Ga0066395_1097163223300004633Tropical Forest SoilAFLKWREGLLASPLWLGWELVIMNLVCAPGGKTFWKDRAYMFGDEFRRYIENDVMKKKPHPDAKPMGVFSIAQSTK*
Ga0066672_1016051123300005167SoilMAGKMLEPPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKREPHPDARPMGAFSICRGAE*
Ga0066688_1052606923300005178SoilMLESPLWMGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFPIGQPAK*
Ga0066676_1047753313300005186SoilWREGLLASQLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDDVMKKKPHPDAKPMGAFSIGQSAT*
Ga0066675_1028963913300005187SoilLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKRKPHPDAKPMGAFPIGQSTT*
Ga0070683_10001856053300005329Corn RhizosphereNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSAEQESAR*
Ga0070683_10174621423300005329Corn RhizosphereSYSQNAFLKWRQGALEPQLWLGWEQVMMNLFGAPGGKALWADRGYMFGAKFRDYIETDLMQRTPHPGAKPLGAFNIGQQTS*
Ga0066388_10006351243300005332Tropical Forest SoilFLSYSQNAFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIENEVMKKKPHPDAKPMGVFSITGADLAHGSHELR*
Ga0066388_10740597113300005332Tropical Forest SoilWREGTLASELWTGWELVIMNLVLPPAGQQSWQERGYPFGNEFRHYVENDVMKRDPHPSARPMGAFSLSARRGV*
Ga0068869_10060274213300005334Miscanthus RhizospherePLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKRKPHPDAKPMGAFSIGQSTQ*
Ga0070660_10084899913300005339Corn RhizosphereLSYSQNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKRKPHPDAKPMGAFSIGQSTQ*
Ga0070673_10126457913300005364Switchgrass RhizosphereERSLAPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKRTPHSDAKPMGAFSIGRRAE*
Ga0070667_10173333423300005367Switchgrass RhizosphereSQNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKRKPHPDAKPMGAFSIGQSTQ*
Ga0070714_10129730123300005435Agricultural SoilMRFSKWREKSLAPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRHYVEDDLMKRTPHPDAKPMGAFPIGQRSE*
Ga0070711_10156508713300005439Corn, Switchgrass And Miscanthus RhizosphereFLLYSQNAFLKWREGLLKPALWLSWEQVMMNLFGAPGGKVLWKERNYLFGEEFRRYIENDLMKREPHPDAKPLGAFSISQAQSN*
Ga0070700_10020519713300005441Corn, Switchgrass And Miscanthus RhizosphereKWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSTEQESAR*
Ga0066689_1041103513300005447SoilMLESPLWMGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPYPDAKPLGAFPIGQPAK*
Ga0066681_1028250613300005451SoilWLGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKRKPHPDAKPMGAFPIGQSTT*
Ga0066687_1001055143300005454SoilLKWRKELLAQPLWRGWELVIMNLVCAPGGKAFWKDRAYMFGDQFRRYVESDLMTREPHPDAKPMGAFSIGGVSDKSEAGEPVARPF*
Ga0066687_1046002823300005454SoilMAGKMLEPPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKREPHPDARPMGDFSICRGAE*
Ga0070663_10121462123300005455Corn RhizosphereEKLLAPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKRTPHSDAKPMGAFSIGRRAE*
Ga0070663_10198718823300005455Corn RhizosphereWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSTEQESAR*
Ga0070707_10014314323300005468Corn, Switchgrass And Miscanthus RhizosphereMPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRQPHPDAKPMGAFSIGQRSEQN*
Ga0070698_10027996523300005471Corn, Switchgrass And Miscanthus RhizosphereLKWREGLLKPALWLGWEQVMMNLFGAPGGRALWKERSYLFGEEFRRYIENDLMIRPPHPDAKPLGAFTIGRPAE*
Ga0070695_10026989023300005545Corn, Switchgrass And Miscanthus RhizospherePDQTPQKLLAPELWLGWEFVIMNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRHAE*
Ga0066692_1045596913300005555SoilPPLWMGWELVIMNLVCAPGGKAFWKERGYLFGEEFRRYVEGDLMKRQPHPDARPMGAFSIGRRAE*
Ga0066692_1073519113300005555SoilMLESPLWMGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFP
Ga0066699_1017999433300005561SoilLKWRKGLLAQPLWRCWELVIMNLVCAPGGKAFWKDRAYMFGDQFRRYVESDLMTREPHPDAKPMGAFSIGGVSDKSEAGEPVARPF*
Ga0066694_1028280723300005574SoilASPLWMGWQQVIMNLVGAPGGKAFWKDRAYMFGDEFRCYIESDLMKRKPHPDAKPMGAFSLDRSAE*
Ga0068857_10209254623300005577Corn RhizosphereSPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSAEQESAR*
Ga0066654_1061234723300005587SoilLLAPSLWLGWEQVMMNLFGAPGGKAFWKERGYMFGDEFRRYIEDDLIKREPHADAKPLGAFSLGEEILARESREAC*
Ga0066903_10002493773300005764Tropical Forest SoilQGLLAPSLWLGWEQIMMNFFGAPGGKDFWKERGYMFGDEFRRYIEDDLIKRKPHPGAKPLGAFGIGEEILARESP*
Ga0066903_10119363113300005764Tropical Forest SoilAFLKWRQGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKKPHPDAKPMGVFSIAGANPADDSH*
Ga0066903_10216209023300005764Tropical Forest SoilAFLKWRQGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKKPHPDAKPMGVFPIGQPAE*
Ga0066656_1074341523300006034SoilSQNAFLKWREGLLASPLWMGWQQVIMNLVGAPGGKAFWKDRAYMFGDEFRCYIESDLMKRKPHPDAKPMGAFSLDRSAE*
Ga0066652_10032595333300006046SoilLWLGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKRKPHPDAKPMGAFPIGQSTT*
Ga0066652_10038532823300006046SoilMAFLSYLQNAFLEWREKMLEPPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVENDLMKRMPHPDAKPLGAFPIGQPAK*
Ga0070716_10152642513300006173Corn, Switchgrass And Miscanthus RhizosphereLSPTHRMRFSKWRERSLAPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRHYVEDDLMKRTPHPDAKPMGAFPIGQRSE*
Ga0066653_1031531823300006791SoilLLAPSLWLGWEQVMMNLFGAPGGKTFWKERGYMFGDEFRRYIEDDLIKREPHPDAKPLGAFRLGEEIRARDPM*
Ga0075433_1071122313300006852Populus RhizospherePLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRYIENDLMKREPHPHAKPMGVFSISPHTE*
Ga0075424_10052362613300006904Populus RhizosphereAFLKWREGLLKPALWLGWEQVMMNLFGAPGGKALWKERSYLFGEEFRRYIEDDLMKRDPHPDAKPLGAFTIARGAE*
Ga0099791_1058315923300007255Vadose Zone SoilLSYSQNAFLKWREGLLATPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRYIENDLMKREPHPDAKPLGAFSIGRRAE*
Ga0099828_1163155223300009089Vadose Zone SoilLKWREGMLEPPLWMGWELLIMNLVSSPGGKDFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGQRTE*
Ga0066709_10321284933300009137Grasslands SoilLWMGWELLIMNLVSSPGGKEFWKARVYLFGEEFRRHVEDDLMTRTPPPDAKPLGAFPIGQPAK*
Ga0099792_1065656623300009143Vadose Zone SoilGEKNCSRRHCGWGWEVVIMNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKREPHPDARPMGAFTIGRGAE*
Ga0114129_1281303413300009147Populus RhizosphereFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDDFRRYIEDEVMKKQPHPDAKPMGVFSIGQPAGEL*
Ga0105243_1119663313300009148Miscanthus RhizosphereNAFLKWRQGLLAPSLWLGWENVIMNLVCAPGGKIFWKERAYLFGEEFRHYVEDDLMKRTPHPDAKPMGAFPIGQT*
Ga0111538_1045069133300009156Populus RhizosphereREGSLSAELWMGWELVMMNLVNAPGGKEFWGERGYLFGEKFRDHVENVIMKRKPHPLAKPMGAFSIAGDS*
Ga0105237_1241496513300009545Corn RhizosphereWREGLLASPLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKRKPHPDAKPMGAFSIGRPSE*
Ga0126382_1160480613300010047Tropical Forest SoilGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFSLGEEILARE*
Ga0134082_1036493913300010303Grasslands SoilQNAFLKWRQGLLEPALWTGWEQVLMNLIGAPGGKGLWKERAYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGQRAE*
Ga0126372_1324303623300010360Tropical Forest SoilLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFSLGQSDERESAR*
Ga0126378_1316682213300010361Tropical Forest SoilMAFLSYSQNAFLKWREGLLAPALWLGWEQVMMNLFGAPGGKAFWKQRSYLFGEEFRRYVENDIMKRPPHPDAKPLGAFSIGPGTE*
Ga0126377_1037865323300010362Tropical Forest SoilLLAQPLWRAWELVIMNLVCAPGGRTFWKGRAYMFGDEFRRYIENDVMKREPHPDAKPVQAFSTGGGIFARGSHESR*
Ga0126379_1037729833300010366Tropical Forest SoilEGLLASPLWLGWELVIMNLVCAPGGKVFWKDRAYMFGDEFRRYIEGEVMKKKPHADAKPMGVFSLSEEILARESHGMKSENSDS*
Ga0126379_1154674023300010366Tropical Forest SoilSQNAFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDDFRRYIEDEVMKKQPHPDAKPMGVFPIGQSVS*
Ga0126379_1280296113300010366Tropical Forest SoilAFLKWRQGLLAPSLWLGWEQIMMNFFGAPGGKDFWKERGYMFGDEFRRYIEDDLLKREPHSGAKPLGAFSIGQGPD*
Ga0126379_1296854613300010366Tropical Forest SoilLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDDVMKKKPHPDAKPMGAFSIGQCSE*
Ga0134128_1156545523300010373Terrestrial SoilNAFLKWREILLAPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKRTPHSDAKPMGAFSIGRRAE*
Ga0126381_10026528413300010376Tropical Forest SoilREGLLASPLWLGWELVIMNLVCAPGGKVFWKDRAYMFGDEFRRYIEGEVMKKKPHADAKPMGVFSLSEEILARESHGMKSENSDS*
Ga0126381_10316709613300010376Tropical Forest SoilLAPSLWLGWEQIMMNFFGAPGGKDFWKERGYMFGDEFRRYIEDDLIKRKPHPGAKPLGAFGIGEEILARESP*
Ga0126383_1215092223300010398Tropical Forest SoilLKWREGLLAQPLWRGWELVIMNLVCAPGGKTFWKERSYLFGDEFRRYIENDLMKREPHPDAKPMGAFSLGEELLARESR*
Ga0126383_1314847423300010398Tropical Forest SoilPLWLGWELVIMNLVCAPGGKAFWQDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFSLGEEILARESR*
Ga0118733_10020974313300010430Marine SedimentEGSLSAELWMGWELIMMNLVSAPGGKDFWSERGYLFGDEFQNHVENIIMKRRPHKNAKPLGAFSIGGSS*
Ga0137364_1004647033300012198Vadose Zone SoilLGWELVIMNLVCAPGGKVFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSISGGSLPTNHAE*
Ga0137382_1032170823300012200Vadose Zone SoilMAREIARPATVDGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRHYVEDDLMKRTPHPDAKPMGAFPIGQRSE*
Ga0137382_1113699923300012200Vadose Zone SoilLLAQPLWRGWELVIMNLVCAPGGKAFWKERAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGRPAE*
Ga0137382_1128261223300012200Vadose Zone SoilPLWLGWELVIMNLVCAPGGKVFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSISGGSLPTNHAE*
Ga0137363_1101243523300012202Vadose Zone SoilSQNAFLKWREGLLESPLWMGWQHVIMNLVCAPGGKAFWKDRAYMFGDEFRRYVEGDLMKREPHPDAKPMGAFPIGQSAT*
Ga0137376_1135073513300012208Vadose Zone SoilGMLEPPLWMGWELLIMNLVSSAGGKGFWKKRGYLFGEEFRRYIENDLMTREPHPDAKPMGAFSISGTLFAGESR*
Ga0137366_1001468813300012354Vadose Zone SoilFLKWREGLLAQPLWRGWELVLMNLVCAPGGKAFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGGGILARESRESR*
Ga0137371_1093008423300012356Vadose Zone SoilLKWREGLLKPALWLGWEQVMMNLFGAPGGKALWNERSYLFGEEFRRYIENDLMKREPHPDATPLGAFSIGGGTK*
Ga0137384_1032283733300012357Vadose Zone SoilFLKWREKMLEPPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRSSE*
Ga0137397_1055940123300012685Vadose Zone SoilMLEPPLWMGWELLIMNLVSSPAGKEFWKERGYLFGEEFRRYVENDLMKRTPHPDAKPMGAFSIGRRAE*
Ga0137407_1080653523300012930Vadose Zone SoilREGLLASPLWMGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFPIGQSAT*
Ga0126375_1012112213300012948Tropical Forest SoilLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRCYIDDDLIKREPHPDAKPMGVFSLGSTPEQTPTR*
Ga0126369_1368233023300012971Tropical Forest SoilNAFLKWREALLKPALWLGWEQVMMNLFGAPGGKALWKERSYLFGDEFRRYIEDDLMKREPHPDAKPMGAFSIGRSAEQEPAG*
Ga0134110_1050381423300012975Grasslands SoilWLGWELVIMNLVCAPGGKVFWKDRAYMFSDEFRRYIENDVMKREPHPDAKPMGAFSISGGSLPTNHAE*
Ga0164308_1200950113300012985SoilPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKREPHPDARPMGAFSIGRRAE*
Ga0164307_1188203213300012987SoilSYSQNAFLKWREGSLAPPLRMGWELVIMNLVCAPGGKAFWKDRGYMFGGEFRHYVEDDLMKRTPHPDAKPMGAFPIGQRSE*
Ga0157374_1135116423300013296Miscanthus RhizosphereMRFSKWRERSLAPPLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRHYVEDDLMKRTPHPDAKPMGAFPVGQRSE*
Ga0157374_1267029913300013296Miscanthus RhizosphereSFLKLLQILLCPELWLGWEFVIMNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRRAE*
Ga0157378_1039975913300013297Miscanthus RhizosphereFLSYSQNAFLKWRQGALEPQLWLGWEQVMMNLFGAPGGKALWADRGYMFGAKFRDYIETDLMQRTPHPGAKPLGAFNIGQQTS*
Ga0157375_1067358613300013308Miscanthus RhizosphereQGALEPQLWLGWEQVMMNLFGAPGGKALWADRGYMFGAKFRDYIETDLMQRTPHPGAKPLGAFNIGQQTS*
Ga0134089_1014059123300015358Grasslands SoilLKWREGLLEPPPWMGWELLIMNLVAAPGGREFWRERGYLFGEEFRRHVENGLMKREPHPDAKPMGAFSIGREG*
Ga0182034_1006404413300016371SoilSPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDDVMKKKPHPDAKPMGVFSIGQRSE
Ga0182037_1005363633300016404SoilLAPALWLAWEQIIMNFTGAPGGKAFWKERAYLFGEEFRRHVEDDLMKRTLHPDAKPFGVFSIAGIK
Ga0187825_1010332233300017930Freshwater SedimentAFIKWKQGLLEPSLWMAWEQIIIHLTGAPGGKGFWKERAYLFGEEFRRYVEDDLIKRTPHPEAKPMGAFSIGQEE
Ga0187785_1023329213300017947Tropical PeatlandWRQGLLSPSLWNGWEQVLMNLLGAPGGKGLWKERAYLFGEEFRRHVEGDLMNRTPHPDAKPLGAFSIGRSDQ
Ga0187779_1005610813300017959Tropical PeatlandLLSPSLWIGWEQVLMNLIGAAGGKSLWKERAYLFGEEFRRHVEDDLMKRTPHPNAKPLGAFSIGRSDQ
Ga0187778_1008133013300017961Tropical PeatlandSLWNGWEQVLMNLLGAPGGKGLWKERAYLFGEEFRRHVEGDLMKRTPHPDAKPLGAFSIGRSDQ
Ga0184618_1010735423300018071Groundwater SedimentMSFISYSQNAFLKWREGLLKPALWLGWEQVMMNLFGAPGGKALWKERSYLFGEEFRRYIENDLMIRPPHPDAKPLGAFTIGPRTE
Ga0066669_1202278513300018482Grasslands SoilWREGLLASPLWLGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKRKPHPDAKPMGAFPIGQSTT
Ga0193747_110263613300019885SoilMAFLSYSQNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRRAE
Ga0193727_109096223300019886SoilLKWRERLLEQPLWRGWEFVIMNLVCAPGGKAFWKDRAYMFGDQFRRYVESDLMTREPHPDAKPMGAFSIGGVSDKSEAGKPVARPF
Ga0193718_107650513300019999SoilQKLLAPELWLGWEFVIMNRVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRAAE
Ga0193731_111416123300020001SoilFLKWREKVLEPPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVENDLMKRTPHPDAKPMGAFNIGRRAE
Ga0193730_119105023300020002SoilQKLLAPELWLGWEFVIMNRVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPISRRAE
Ga0210407_1074001713300020579SoilQNAFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIGQSAT
Ga0193709_108917123300021411SoilYSQNAFLKWREGLLASPLWMGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIAHGTE
Ga0126371_1062486613300021560Tropical Forest SoilMNLVCAPGGKAFWKDRAYMFGDEFRKYIDDDLIKRQPHPAARPMGVGNESPSTSIASA
Ga0207688_1107868413300025901Corn, Switchgrass And Miscanthus RhizosphereLAPSLWLGWEQVIMNLVCAPGGKAFWKERSYLFGEEFRRYVEDDLMKRTPHPEAKPMGAFSIGRQAR
Ga0207685_1040197013300025905Corn, Switchgrass And Miscanthus RhizosphereLAPPLWRGWELVIMNLVCAPGGKAFWKERAYMFGDEFRRYIETDLMKREPHPDAKPMGAFAIGQPVK
Ga0207699_1078114813300025906Corn, Switchgrass And Miscanthus RhizosphereLWMGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRHYVEDDLMKRTPHPDAKPMGAFPVGQRSE
Ga0207693_1084874813300025915Corn, Switchgrass And Miscanthus RhizosphereWELVIMNLVCAPGGKAFWKERAYMFGDEFRRYIETDLMKREPHPDAKPMGAFSISGGSLPTNHEE
Ga0207646_1008390843300025922Corn, Switchgrass And Miscanthus RhizosphereMPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRQPHPDAKPMGAFSIGQRSEQN
Ga0207646_1125784323300025922Corn, Switchgrass And Miscanthus RhizosphereSYSQNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRYIEDDLIKRQPHPDAKPMGVFSISQRSE
Ga0207687_1104015313300025927Miscanthus RhizosphereWPDQTPQKLLAPELWLGWEFVIMNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKRGPHPDAKPLGAFPIGRHAE
Ga0207709_1124946423300025935Miscanthus RhizosphereNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKRKPHPDAKPMGAFSIGQSTQ
Ga0207661_1007486513300025944Corn RhizosphereNAFLKWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSAEQESAR
Ga0207668_1035662123300025972Switchgrass RhizosphereLEPQRWLGWEQVMMNLFGAPGGKALWADRGYMFGAKFRDYIETDLMQRTPHPGAKPLGAFNIGQQTS
Ga0207703_1010669713300026035Switchgrass RhizosphereLKWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSTEQESAR
Ga0209055_117362323300026309SoilMLESPLWMGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFPIGQPAK
Ga0209153_102000123300026312SoilMAGKMLEPPLWMGWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKREPHPDARPMGAFSICRGAE
Ga0209803_111958133300026332SoilMLESPLWMGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPYPDAKPLGAFPIGQPAK
Ga0209577_1073704523300026552SoilMGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGRRAEEVASDRC
Ga0209283_1052298713300027875Vadose Zone SoilEGMLEPPLWMGWELLIMNLVSSPGGKDFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGQRTE
Ga0268264_1098524013300028381Switchgrass RhizosphereFLKWREGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSTEQESAR
Ga0307282_1019231433300028784SoilGWELVIMNLVAAPGGREFWKERGYLFGEEFRRHVEGDLMKRQPHPDAKPMGAFSISGGSLPTNHAE
Ga0307282_1064992413300028784SoilKPALWLGWEQVMMNLFGAPGGKALWKERSYLFGEEFRRYIENDLMIRPPHPDAKPLGAFTIGRPAE
Ga0307290_1032482313300028791SoilAQPLWRGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGRPAE
Ga0307312_1067323113300028828SoilLWRGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGRPAE
Ga0307308_1006871323300028884SoilMAEGLLEPPLWMGWELVIMNLVAAPGGREFWKERGYLFGEEFRRHVEGDLMKRQPHPDAKPMGAFSISGGSLPTNHAE
Ga0170824_11868383113300031231Forest SoilLWMGWEQVMMNLFAAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIAGANPAHE
Ga0170824_12017666423300031231Forest SoilLLAPSLWLGWEQVMMNLFGAPGGKAFWKERGYMFGDEFRRYIENDLMKREPHPDAKPMGAFSISPHTE
Ga0170820_1030138923300031446Forest SoilASPLWKAWELVIMNLVCAPGGKAFWKDRAYMFGDEFRQHIENDLMKREPHPDAKPMGAFRIGQPTG
Ga0170818_10487138733300031474Forest SoilMGWELVIMNLVCAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIAQAQSN
Ga0170818_10567594223300031474Forest SoilEGLLASPLWMGWQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRYIESDLMNRQPHPDAKPMGVFSIGAANPAHESHEPR
Ga0318573_1076446013300031564SoilAFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDDVMKKKPHPDAKPMGVFSLAGANLAHESHESR
Ga0318520_1072201413300031897SoilLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFSIGQRSE
Ga0306923_1074673613300031910SoilAFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDDVMKKKPHPDAKPMGVFSIGQRSE
Ga0310913_1065616713300031945SoilLLAPSLWLGWEQVMMNLFGAPGGKAFWKERGYMFGDEFRRYIEDDLIKMEPHPDAKPLGAFSLDRPAE
Ga0310913_1080878623300031945SoilLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFPIGQSAT
Ga0310909_1150255923300031947SoilLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFPIGQSAT
Ga0318533_1124657523300032059SoilGVLASALWLAWEQIIMNFTGAPAGKAFWKERAYLFGEEFRRHVEDDLMKRTLHPDAKPFGVFSIAGIK
Ga0306924_1073982813300032076SoilFLKWREGLLASPLWLGWELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFPIGQSAT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.