Metagenome / Metatranscriptome Family F046493

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046493
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	81 residues
Representative Sequence	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTATAPQWLHRQACEGGVASDHAALMR
Number of Associated Samples	115
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.86 %
% of genes near scaffold ends (potentially truncated)	17.88 %
% of genes from short scaffolds (< 2000 bps)	80.13 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.444 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.152 % of family members)
Environment Ontology (ENVO)	Unclassified (33.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.305 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.48% β-sheet: 0.00% Coil/Unstructured: 43.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF03900	Porphobil_deamC	39.74
PF12705	PDDEXK_1	10.60
PF02515	CoA_transf_3	6.62
PF13361	UvrD_C	2.65
PF00343	Phosphorylase	0.66
PF03600	CitMHS	0.66
PF00547	Urease_gamma	0.66
PF13538	UvrD_C_2	0.66
PF13493	DUF4118	0.66
PF01042	Ribonuc_L-PSP	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	39.74
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	6.62
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.66
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.44 %
Unclassified	root	N/A	16.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.44 %
Unclassified	root	N/A	16.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.44 %
Unclassified	root	N/A	16.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.15 %
Unclassified	root	N/A	16.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.83 %
Unclassified	root	N/A	16.56 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	44.37 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	21.85 %
Unclassified	root	N/A	16.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.37 %
Unclassified	root	N/A	16.56 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	9.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.64 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.37 %
Unclassified	root	N/A	16.56 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	5.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_117760438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300004092\|Ga0062389_104378120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300005167\|Ga0066672_10893468	Not Available	551	Open in IMG/M
3300005171\|Ga0066677_10842794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300005175\|Ga0066673_10137929	All Organisms → cellular organisms → Bacteria → Proteobacteria	1347	Open in IMG/M
3300005175\|Ga0066673_10212164	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300005177\|Ga0066690_11034363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300005177\|Ga0066690_11053907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300005178\|Ga0066688_11023408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300005179\|Ga0066684_10221887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1230	Open in IMG/M
3300005179\|Ga0066684_10938438	Not Available	562	Open in IMG/M
3300005179\|Ga0066684_11064614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300005187\|Ga0066675_10744576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	738	Open in IMG/M
3300005434\|Ga0070709_11171394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300005435\|Ga0070714_100250881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1636	Open in IMG/M
3300005445\|Ga0070708_101727143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300005447\|Ga0066689_10701778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300005451\|Ga0066681_10535154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300005454\|Ga0066687_10889843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300005467\|Ga0070706_101057640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300005467\|Ga0070706_101329929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300005471\|Ga0070698_101004496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300005536\|Ga0070697_100737087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300005538\|Ga0070731_10117442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1763	Open in IMG/M
3300005540\|Ga0066697_10407830	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005541\|Ga0070733_10079862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2068	Open in IMG/M
3300005541\|Ga0070733_10757155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300005542\|Ga0070732_10491087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300005556\|Ga0066707_10762255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	601	Open in IMG/M
3300005556\|Ga0066707_10808823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300005560\|Ga0066670_10207426	Not Available	1178	Open in IMG/M
3300005560\|Ga0066670_10374732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	869	Open in IMG/M
3300005569\|Ga0066705_10019949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3434	Open in IMG/M
3300005576\|Ga0066708_10737359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300005607\|Ga0070740_10139446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1059	Open in IMG/M
3300005764\|Ga0066903_100968040	Not Available	1550	Open in IMG/M
3300006028\|Ga0070717_10143419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2061	Open in IMG/M
3300006031\|Ga0066651_10219986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300006046\|Ga0066652_100299410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1428	Open in IMG/M
3300006176\|Ga0070765_100407608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300006794\|Ga0066658_10657781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	575	Open in IMG/M
3300006800\|Ga0066660_11673823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300006804\|Ga0079221_11789804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300006954\|Ga0079219_10610489	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300009012\|Ga0066710_101077382	Not Available	1242	Open in IMG/M
3300009012\|Ga0066710_101949625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	875	Open in IMG/M
3300009012\|Ga0066710_104709523	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300009038\|Ga0099829_10063795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2773	Open in IMG/M
3300009089\|Ga0099828_10225755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1675	Open in IMG/M
3300009089\|Ga0099828_10633768	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300009089\|Ga0099828_10912753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	784	Open in IMG/M
3300009090\|Ga0099827_10097235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2334	Open in IMG/M
3300009090\|Ga0099827_10609460	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300009137\|Ga0066709_100315840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2130	Open in IMG/M
3300009137\|Ga0066709_104255448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300009143\|Ga0099792_10148533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1289	Open in IMG/M
3300009143\|Ga0099792_11147508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	525	Open in IMG/M
3300010301\|Ga0134070_10476804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300010373\|Ga0134128_11584425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300011270\|Ga0137391_11126460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300011440\|Ga0137433_1134601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	789	Open in IMG/M
3300011444\|Ga0137463_1018858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2458	Open in IMG/M
3300011444\|Ga0137463_1113847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1017	Open in IMG/M
3300012189\|Ga0137388_10149705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2065	Open in IMG/M
3300012189\|Ga0137388_10689010	Not Available	949	Open in IMG/M
3300012200\|Ga0137382_10089427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2013	Open in IMG/M
3300012202\|Ga0137363_11018146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300012203\|Ga0137399_11332947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300012206\|Ga0137380_10247452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1607	Open in IMG/M
3300012207\|Ga0137381_10254858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1526	Open in IMG/M
3300012207\|Ga0137381_11326507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300012209\|Ga0137379_11827584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300012210\|Ga0137378_10948434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	774	Open in IMG/M
3300012210\|Ga0137378_11253543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300012212\|Ga0150985_113965616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	944	Open in IMG/M
3300012357\|Ga0137384_10337948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1249	Open in IMG/M
3300012359\|Ga0137385_11668903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300012362\|Ga0137361_11255735	Not Available	664	Open in IMG/M
3300012683\|Ga0137398_10615257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300012917\|Ga0137395_11182638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300012918\|Ga0137396_10607509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	809	Open in IMG/M
3300012923\|Ga0137359_11277097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300012924\|Ga0137413_11050925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300012925\|Ga0137419_11087367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300012927\|Ga0137416_12146158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300012971\|Ga0126369_13173147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300012975\|Ga0134110_10327773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300013503\|Ga0120127_10039522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300013764\|Ga0120111_1030391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1446	Open in IMG/M
3300014157\|Ga0134078_10205799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300014501\|Ga0182024_10011085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18196	Open in IMG/M
3300015245\|Ga0137409_10666515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300015357\|Ga0134072_10469373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300015372\|Ga0132256_102248552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300015374\|Ga0132255_106324914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300018062\|Ga0187784_10882669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300018431\|Ga0066655_11165582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300018433\|Ga0066667_10379788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1135	Open in IMG/M
3300018433\|Ga0066667_11791138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300018433\|Ga0066667_11861642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300018482\|Ga0066669_10094639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2055	Open in IMG/M
3300018482\|Ga0066669_10285521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1329	Open in IMG/M
3300018482\|Ga0066669_11074082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300019888\|Ga0193751_1049378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1822	Open in IMG/M
3300019888\|Ga0193751_1076257	Not Available	1353	Open in IMG/M
3300019888\|Ga0193751_1100757	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300020582\|Ga0210395_10569675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300021286\|Ga0179583_1129140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300021420\|Ga0210394_10011799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8548	Open in IMG/M
3300021420\|Ga0210394_10349224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300021420\|Ga0210394_11033858	Not Available	711	Open in IMG/M
3300021559\|Ga0210409_11194306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	636	Open in IMG/M
3300022467\|Ga0224712_10579910	Not Available	547	Open in IMG/M
3300026295\|Ga0209234_1047512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1632	Open in IMG/M
3300026312\|Ga0209153_1012851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2664	Open in IMG/M
3300026316\|Ga0209155_1175608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300026323\|Ga0209472_1073142	Not Available	1410	Open in IMG/M
3300026530\|Ga0209807_1080031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1449	Open in IMG/M
3300026551\|Ga0209648_10166486	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300027610\|Ga0209528_1061468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300027706\|Ga0209581_1086360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1102	Open in IMG/M
3300027842\|Ga0209580_10328723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300027867\|Ga0209167_10700007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300027875\|Ga0209283_10157297	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300027882\|Ga0209590_10280679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1067	Open in IMG/M
3300027903\|Ga0209488_10366229	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300027905\|Ga0209415_11017605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300028536\|Ga0137415_11065489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300028906\|Ga0308309_10681815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300031231\|Ga0170824_102720689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300031525\|Ga0302326_11415614	Not Available	938	Open in IMG/M
3300031670\|Ga0307374_10043543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4819	Open in IMG/M
3300031716\|Ga0310813_10629015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	952	Open in IMG/M
3300031754\|Ga0307475_10018005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4896	Open in IMG/M
3300031965\|Ga0326597_10015844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	9840	Open in IMG/M
3300032180\|Ga0307471_100580068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1279	Open in IMG/M
3300032895\|Ga0335074_10001780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	29174	Open in IMG/M
3300034817\|Ga0373948_0073068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.70%
Aquatic	Environmental → Aquatic	2.65%
Plants	Host-Associated → Plants	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.04%
Sediment	Environmental → Aquatic → Sediment	1.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Peat	Environmental → Terrestrial → Peat	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.81%
Loam	Environmental → Terrestrial → Soil → Loam	12.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.66%
Clay	Environmental → Terrestrial → Soil → Clay	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.30%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.66%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.66%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.66%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1177604381	3300002568	Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLR
Ga0062389_1043781201	3300004092	Bog Forest Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHAVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVASDHAALMR*
Ga0066672_108934681	3300005167	Soil	MRVLIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0066677_102217481	3300005171	Soil	MRALISFYLAIGVVLLVIGFVATGPCPNKNQDVVSDVVFVLGWPVYLYDDVVKGNTAAPQWLHRQACEGGVVAYQSARTDQSRQNPPTRAR*
Ga0066677_108427941	3300005171	Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGG
Ga0066673_101379292	3300005175	Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0066673_102121642	3300005175	Soil	MRALITLYLTIGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGAKKTQAVR*
Ga0066690_104210941	3300005177	Soil	MRSLVGLYLSIGLVLLLVGFVATGPCPNKNQDVVSDVVFVLGWPVFLYDDVASGHAAAPQWLHRQACEGGVVAYRSADQPAPGSGSTSPPAGR*
Ga0066690_110343631	3300005177	Soil	MRALISFYLAIGVVLLVIGFVATGPCPNKNQDVVSDVVFVLGWPVYLYDDVVKGNTAAPQWLHRQACEGGV
Ga0066690_110539071	3300005177	Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVAAADHAALSR*
Ga0066688_110234082	3300005178	Soil	MRALITLYLTIGIVLLLLGLFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPQWLHR
Ga0066684_102218871	3300005179	Soil	GGCVMRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDLVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0066684_109384381	3300005179	Soil	GGCVMRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0066684_110646141	3300005179	Soil	MRALISLYLTIGVVLLVLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPQWLHRQACEGGVNPRKT*
Ga0066675_107445762	3300005187	Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVAAADHAALSR*
Ga0070709_111713941	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRALIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELAR*
Ga0070714_1002508812	3300005435	Agricultural Soil	MRALIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELRR*
Ga0070713_1016873001	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLVGLYLSVGIVLLIVGFVATGPCPNKNNDVVSDVVFVLGWPVYLYDDVVQGKATAPQWLHRQACEGGVVAYRSAAEPPAPASGSTSEPVGH*
Ga0070708_1017271431	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRALITLYLTIGVVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQAC
Ga0066689_107017781	3300005447	Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVIAYQSARDGRSR*
Ga0066681_105351542	3300005451	Soil	MRALISLYLTIGVVLLVLGFFATGDCPDKNTDVVSDIVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGVGVKKTQAAL*
Ga0066687_108898432	3300005454	Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQ
Ga0070706_1010576401	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRALITLYLTIGVVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQACEGGVGVKKTQALLR*
Ga0070706_1013299291	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRALISLYLSIGVVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQACEGGVGVKKTQALLR*
Ga0070698_1010044962	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRALITLYLTIGVVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQACEGGVGVKKTQALR*
Ga0070697_1007370872	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLIGTYLSIGIILLVLGFFATGACPDKNKDVVSHAVFVLGWPVYLYDDVVHGTATAPQWLHRQACERGVAANHAALLH*
Ga0070731_101174421	3300005538	Surface Soil	MRSLIGSYLSIGIVLLLLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVIHGTGSAPQWLHRQACAGGVAAEHAELSR*
Ga0066697_104078301	3300005540	Soil	KEGGPMRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVASDHAALSR*
Ga0070733_100798623	3300005541	Surface Soil	MRLLLGSYLSVGLVLLLVGFFATGPCPNKNKDWVSDAVFVVGWPVYLYDDVVHGTATAPQWLHRQACEGGVVSDHAALMR*
Ga0070733_107571552	3300005541	Surface Soil	MRALIGLYLSLGLVLLLFGFFATGPCPTMNKDVVSDVVFVAGWPVYLYKDVVQSNATVPQWLHRQACQGGVAAEHAQL*
Ga0070732_104910872	3300005542	Surface Soil	MRSLIGTYLSIGIVLLVLGFVATGPCPDKNRDVVSHVVFVLGWPVYLYDDVVHGAATAPQWLHRQACEGGVAADHAALMR*
Ga0066707_107622551	3300005556	Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVA
Ga0066707_108088232	3300005556	Soil	MRALITLYLTIGIVLLLLGLFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPQWLHRQACEGGVNPRKT*
Ga0066670_102074262	3300005560	Soil	FYLIIGVVLLAIGFFATGPCPEKNTDVVSDLVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0066670_103747322	3300005560	Soil	MRALISFYLAIGVVLLVIGFVATGPCPNKNQDVVSDVVFVLGWPVYLYDDVVKGNTAAPQWLHRQACEGGVASNHAALAR*
Ga0066705_100199493	3300005569	Soil	MRALITLYLTVGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGAKKTQAVR*
Ga0066708_107373592	3300005576	Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDLVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0066708_110706671	3300005576	Soil	MRALISFYLAIGVVLLVIGFVATGPCPNKNQDVVSDVVFVLGWPVYLYDDVVKGNTAAPQWLHRQACEGGVVAYQSARTDQSRQNPPARAR*
Ga0070740_101394462	3300005607	Surface Soil	MRALIGFYLSIGIALLLIGFFATGPCPDKNGDVVSDAVFVLGWPVYLYDNVAHGKATAPEWLHRQACEGGVVAYRTDQSR*
Ga0066903_1009680403	3300005764	Tropical Forest Soil	MRSLVAFYLLIGIIFLVLGWFATGPCPNKNFDPVSNAVFVLAWPVYLYDDVVRGTALPPEWLHRQACEGGLRTQRAMLTR*
Ga0070717_101434191	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELAR*
Ga0066651_102199862	3300006031	Soil	MRALISLYLTIGVVLLVLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGAKKTQAVR*
Ga0066652_1002994102	3300006046	Soil	MRVLIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQ
Ga0070765_1004076082	3300006176	Soil	MRIIVSLYFAIGIILLAIGFFATGPCPNKNGDVVSDVVFVLAWPVYLYGDVVAGPMTPNDWLHKQACEGGLGGQHGDTPVPAAPPAEQK*
Ga0066658_106577812	3300006794	Soil	MRSLVGTYLSIGIVLLVLGFVATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVAAADHAALSR*
Ga0066660_107260462	3300006800	Soil	AGARQSLRRNWFALLRKRVRAMRALINFYLAIGIVLLVIGFVATGPCPNKNQDVVSDVVFVLGWPVYLYDDVVKGNTAAPQWLHRQACEGGVVAYQSARTDQSRQNPPTRAR*
Ga0066660_116738231	3300006800	Soil	MRALISLYLTIGVVLLVLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPQWLHRQACEGGVGARKT*
Ga0079221_117898041	3300006804	Agricultural Soil	MRALIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELR
Ga0079219_106104892	3300006954	Agricultural Soil	VRALIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELRR*
Ga0099794_105203921	3300007265	Vadose Zone Soil	MRSLVGLYLSIGLVLLVVGFFATGPCPNKNKDVVSDAVFVLGWPVYLYDDVASGHAAAPQWLHRQACEGGVVAYRSATQPGEGSGSSSLPSRR*
Ga0066710_1010773821	3300009012	Grasslands Soil	MRALITLYLTIGIVLLLLGLFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPQWLHRQACEGGVNPRKT
Ga0066710_1019496252	3300009012	Grasslands Soil	MRSLVGTYLSIGILLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVASDHAALSR
Ga0066710_1047095232	3300009012	Grasslands Soil	MRSLAGTYLSIGIVLLLLGFFATGPCPAKNKDVVSHTVFVLGWPVYLYDDVVHGTATAPKWLHRQA
Ga0099829_100637952	3300009038	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTGTAPQWLHRQACQGGVAADHAALSR*
Ga0099829_109525942	3300009038	Vadose Zone Soil	MRSLVGLYLSIGLVLLVVGFFATGPCPNKNKDVVSDAVFVLGWPVFLYDDVASGHAAAPQWLHRQACEGGVVAYRSATQPGEGSGSSSLPSRR*
Ga0099828_102257552	3300009089	Vadose Zone Soil	MRSLIGTYLSIGIVLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACEGGVADHAALSR*
Ga0099828_106337682	3300009089	Vadose Zone Soil	MRSLIGTYLAIGIVLLVLGFVATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVATNHAALAR*
Ga0099828_109127531	3300009089	Vadose Zone Soil	MRSLVGLYLSIGLVLLVVGFFATGPCPNKNKDVVSDAVFVLGWPVYLYDDVASGHAAAPQWLHRQACEGGVVA
Ga0099827_100972352	3300009090	Vadose Zone Soil	MRSLVGTYLSIGILLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACQGGVPDRAALLR*
Ga0099827_105031631	3300009090	Vadose Zone Soil	MRSLVGLYLSIGLVLLAVGFFATGPCPNKNKDVVSDAVFVLGWPVFLYDDVASGHAAAPQWLHRQACEGGVVAYRSATQPGEGSGSSSLPSRR*
Ga0099827_106094602	3300009090	Vadose Zone Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVASDHAALLR*
Ga0066709_1003158402	3300009137	Grasslands Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVASDHAALSR*
Ga0066709_1010856352	3300009137	Grasslands Soil	MRSLVGLYLSIGIVLLVVGFVATGPCPNKNKDVVSDIVFVLGWPVFLYDDVASGHAAAPQWLHRQACEGGVVAYRSADQPAPGSGSTSPPAGR*
Ga0066709_1042554482	3300009137	Grasslands Soil	MRSLVGTYLSIGILLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVIAYQSARDGRSR*
Ga0099792_101485332	3300009143	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACEGGVADHAALSR*
Ga0099792_111475081	3300009143	Vadose Zone Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQ
Ga0134070_104768042	3300010301	Grasslands Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQACEGGVGARKT*
Ga0134128_115844251	3300010373	Terrestrial Soil	MRALISLYLTIGVVLLLLGLFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQACEGGVGTRKTQAAR*
Ga0137391_111264602	3300011270	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATAPKWLHRQACQGGVADRAALLR*
Ga0137433_11346011	3300011440	Soil	MRSLIGTYLSVGIVLLLVGFFATGPCPDKNKDFVSGGVFVLGWPVYLYNEVLHGDVTASQWLHRQACEGGGAANRAAAQLTDQPKPN*
Ga0137463_10188582	3300011444	Soil	MRSLIGLYLSIGIVLLMVGFFATGPCPNKNTDVVSGVVFVLGWPVYLYGGIVQGDATSPQWLHRQACEGGVTANSAAQLR*
Ga0137463_11138472	3300011444	Soil	MRSLIGTYLSVGIVLLLVGFFATGPCPEKNKDVVSGAVFVLGWPVYLYDEVLHGDVTAPQWLHRQACQGGVVAARAASRTDQPKPN*
Ga0137389_116433262	3300012096	Vadose Zone Soil	LYLSVGLVLLVVGFFATGPCPDKNKDVVSDAVFVLGWPVYLYDDVASGNAAAPQWLHRQACEGGVVAYRSATQPGEGSGSSSSPSRR*
Ga0137388_101497052	3300012189	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPDKNKDVVSHTDFVLGWPVYLYDDVVHGTATGPKWLHRQACEGGVADHAALSR*
Ga0137388_106890102	3300012189	Vadose Zone Soil	MRSLVGTYLSIGIVLLVLGFVATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVATNHAALAR*
Ga0137382_100894272	3300012200	Vadose Zone Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVSLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0137363_110181462	3300012202	Vadose Zone Soil	MRSLAGTYLSIGIVLLLLGFFATGPCPAKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACQGGVPDRAALLR*
Ga0137399_113329471	3300012203	Vadose Zone Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPEWLHRQACEGGVGTRKTQAVR*
Ga0137380_102474521	3300012206	Vadose Zone Soil	MRSLVGTYLSIGVLLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACQGGVPDRAALLR*
Ga0137381_102548582	3300012207	Vadose Zone Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVASDHAALSR*
Ga0137381_113265072	3300012207	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPAKNKDVVSHTVFVLGWPVYLYDDVVHGAATAPKWLHRQACEGGVPGDHAALSR*
Ga0137379_118275842	3300012209	Vadose Zone Soil	LVGTYLSIGILLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWVHRQACQGGVPDRAALLR*
Ga0137378_109484342	3300012210	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPAKNKDVVSHTVFVLGWPVYLYDEVVHGSATAPKWLHRQACEGGVPGDHAALLR*
Ga0137378_112535432	3300012210	Vadose Zone Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNSDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0150985_1139656162	3300012212	Avena Fatua Rhizosphere	MRALISLYLTIGVVLLVLGFFATGDCPDKNTDVVSNTVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGVGTRKTQAAR*
Ga0137384_103379482	3300012357	Vadose Zone Soil	MRSLVGTYLSIGILLLLLDFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACQGGVPDRAALLR*
Ga0137385_116689031	3300012359	Vadose Zone Soil	MRSLVGTYLSIGILLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVASDHAALSR*
Ga0137361_112557352	3300012362	Vadose Zone Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKATAPQWLHRQACEGGVASDHAALSR*
Ga0137390_107742282	3300012363	Vadose Zone Soil	MRSLVGLYLSIGLVLLVVGFFATGPCPNKNKDVDSDAVFVLGWPVYLYDDVASGHAAAPQWLHRQACEGGVAAYRSTTQPGEGSGSSSLPSRR*
Ga0137398_106152572	3300012683	Vadose Zone Soil	MRSLVAFYLLIGIALLALGWFATGPCPNKNLDPLSDAVVVRAGPVYLYDDVVHGTMLPPEWLHRQACEGGLRTQRAMLTR*
Ga0137395_111826382	3300012917	Vadose Zone Soil	MRSLAGTYLSIGIVLLLLGFFATGPCPAKNTDVVSHTVFVLGWPVYLYDDVVHGKATAPQWLHRQACEGGAAADHAALSR*
Ga0137396_106075092	3300012918	Vadose Zone Soil	MRSLVGTYLSIGILLLVLGFFATGPCPDKNRDVISHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVASDHAALSR*
Ga0137359_112770972	3300012923	Vadose Zone Soil	MRSLVSTYLSIGIVLLVLGFFATGPCPDKTRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVASDHAALAR*
Ga0137413_110509251	3300012924	Vadose Zone Soil	MRSLVAFYLLIGIALLALGWFATGPCPNKNLDPLSDAVFVLAWPVYLYDDVVHGTMLPPEWLHRQACEGGL
Ga0137419_110873671	3300012925	Vadose Zone Soil	MRVLIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVVHGNLSAPEWLHRQACEGGVGTRKTQAVR*
Ga0137416_121461582	3300012927	Vadose Zone Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKATAPQWLHRQACEGGVVASRAPSRGDQPKPN*
Ga0126369_131731472	3300012971	Tropical Forest Soil	MFPMRSLIGFYLSIGIVLLLVGLFATGECPDKNKDVVSDVVFVLGWPVYLYDDVVHGSISAPQWLHRQACEGGVVALYRAPVR*
Ga0134110_103277731	3300012975	Grasslands Soil	MRALITLYLTIGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGARKTQAVR*
Ga0120127_100395222	3300013503	Permafrost	MRSLLGLYLSIGIVLLVVGFFATGPCPDKNKDVVSDVVFVVGWPVYLYDGVVQGNAASPQWLHKQACEGGVTANRAAQLTPKPN*
Ga0120111_10303913	3300013764	Permafrost	MRAKGNPMRSLLSLYLSIGIVLLVVGFFATGPCPDKNKDVVSDVVFVVGWPVYLYDGVVQGNAASPQWLHKQACEGGVTANRAAQLTPKPN*
Ga0134078_102057992	3300014157	Grasslands Soil	MRALIAFYLIIGVVLLAIGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR*
Ga0182024_1001108514	3300014501	Permafrost	MRSFVGSYLSIGIVLLLLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTGSAPQWLHRQACAGGVAAEHAALTR*
Ga0137409_106665152	3300015245	Vadose Zone Soil	MRSLVAFYLLIGIALLALGWFATGPCPNKNLDPLSDAVFVLAWPVYLYDDVVHGTMLPPEWLHRQACEGGLRTQRAMLTR*
Ga0134072_104693731	3300015357	Grasslands Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKASAPQWLHRQACEGGVASDHAA
Ga0132256_1022485522	3300015372	Arabidopsis Rhizosphere	MRSLVGLYLSIGIVLLMVGFFATGPCPNKNTDVVSGVVFVLGWPVYLYGGVVQGDATSPQWLHRQACEGGVTANRAAALTGKAE*
Ga0132255_1063249141	3300015374	Arabidopsis Rhizosphere	LYLTIGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLSAPEWLHRQACEGGVGVKRTQALLR*
Ga0187784_108826692	3300018062	Tropical Peatland	MRALISLYLAIGIVLLAFGFLATGPCPNKNTDVVNDVVFVIIWPVSLYEYVITGGMTPVDWLHKQACEGGLGEHGIDLPKPVQQ
Ga0066655_111655821	3300018431	Grasslands Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVASDHAALSR
Ga0066667_103797882	3300018433	Grasslands Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR
Ga0066667_117911382	3300018433	Grasslands Soil	MRALITLYLTIGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLTAPQWLHRQACEGGVGARKT
Ga0066667_118616421	3300018433	Grasslands Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVAAADHAALSR
Ga0066667_120841632	3300018433	Grasslands Soil	MRSLVGLYLSIGIVLLVVGFVATGPCPNKNKDVVSDVVFVLGWPVFLYDDVASGHAAAPQWLHRQACEGGVVAYRSADQPAPGSGSTSPPAGR
Ga0066669_100946392	3300018482	Grasslands Soil	MRALITLYLTIGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGAKKTQAVR
Ga0066669_102855212	3300018482	Grasslands Soil	MRVLIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR
Ga0066669_110740821	3300018482	Grasslands Soil	MRALIAFYLIIGVVLLAIGFFGIGPCPEKNTDVVSDLVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR
Ga0193751_10493782	3300019888	Soil	MRALIALYLIIGIVLLVLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVVNGTLTPPAWLHRQACEGGKRPTQKTELAR
Ga0193751_10762572	3300019888	Soil	MRSLIGLYLTIGIVLLMVGFFATGPCPDKNKDLVSDVVFVVGWPVYLYDGVVQGNAASPEWLHKQACEGGVTADRAAQLR
Ga0193751_11007571	3300019888	Soil	AAPMRSLIGLYLSIGIVLLMVGFFATGPCPDKNKDVVSDVVFVVGWPVYLYDGVVQGNAASPEWLHRQACEGGVAPNRAAALTR
Ga0210395_105696751	3300020582	Soil	MRSLIGSYLSIGIVLLLLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTGTAPQWLHRQACAGGGATEHAELSR
Ga0179583_11291401	3300021286	Vadose Zone Soil	MRSLVALYLLIGIAMLALGWFATGPCPNKNYDPVSDAVFVLAWPVYLYDDVVHGTMSPPEWLHRQACEGGQRTQR
Ga0210394_100117995	3300021420	Soil	MRSLIGSYLSIGIVLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTGSAPQWLHRQACAGGVATEHAELSR
Ga0210394_103492242	3300021420	Soil	MRSLIGSYLSIGIVLLLLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTGTAPQWLHRQACAGGVAAEHAELSR
Ga0210394_110338582	3300021420	Soil	MRALIGFYLSVGIVLLVIGFFATGPCPQKNGDVVSDAVFVLGWPVYLYDNVVHGTATGSQWLHHQACEGAVAFRDTRPAQ
Ga0210409_111943062	3300021559	Soil	MRSLVGTYLSIGIVLLVLGFFATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGTATAPQWLHRQACEGGVASDHAALMR
Ga0224712_105799101	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LSMVAMRGLLGGYLVVGLVLLLIGFFATGPCPDKNRDVVSNAVFVLGWPVYLYDDVVQGNASAPQWLHRQACEGGVVALGGSQQPDRVVGKR
Ga0209234_10475121	3300026295	Grasslands Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTEL
Ga0209153_10128512	3300026312	Soil	MRALIAFYLIIGVVLLAIGFFATGPCPEKNTDVVSDLVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELLR
Ga0209155_11756082	3300026316	Soil	MRALISLYLVVGILLLLLGFFATGDCPDKNTDVVSDTVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGVGVKKTQAAL
Ga0209472_10731421	3300026323	Soil	TLYLTIGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGAKKTQAVR
Ga0209807_10800312	3300026530	Soil	MRALITLYLTVGIVLLLLGFFATGDCPDKNTDVVSDVVFVLGWPVYLYDDVVHGNLAAPEWLHRQACEGGIGAKKTQAVR
Ga0209648_101664862	3300026551	Grasslands Soil	MRSLIGTYLAIGIVLLVLGFVATGPCPDKNRDVVSHTVFVLGWPVYLYDDVVHGKGTAPQWLHRQACEGGVATNHAALAR
Ga0209648_105541902	3300026551	Grasslands Soil	MRSLVGLYLSIGLVLLVVGFFATGPCPNKNQDVVSDAVFVLGWPVFLYDDVASGHAAAPQWLHRQACEGGVVAYRSATQPGEGSGSSSLPSRR
Ga0209528_10614682	3300027610	Forest Soil	MRALITLYLMIGIVLLLLGFFATGDCPDKNTDVVSDAVFVLGWPVYLYDDVVHGNLSAPEWLHRQACEGGVGVKKTQALLR
Ga0209581_10863602	3300027706	Surface Soil	MRALIGFYLSIGIALLLIGFFATGPCPDKNGDVVSDAVFVLGWPVYLYDNVAHGKATAPEWLHRQACEGGVVAYRTDQSR
Ga0209580_103287232	3300027842	Surface Soil	MRSLIGTYLSIGIVLLVLGFVATGPCPDKNRDVVSHVVFVLGWPVYLYDDVVHGAATAPQWLHRQACEGGVAADHAALMR
Ga0209167_107000071	3300027867	Surface Soil	MRLLLGSYLSVGLVLLLVGFFATGPCPNKNKDWVSDAVFVVGWPVYLYDDVVHGTATAPQWLHRQACEGGVVSDHAALMR
Ga0209283_101572973	3300027875	Vadose Zone Soil	MRSLIGTYLSIGIVLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACECGVADHAALSR
Ga0209590_102806792	3300027882	Vadose Zone Soil	MRSLVGTYLSIGILLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACQGGVPDRAALLR
Ga0209488_103662292	3300027903	Vadose Zone Soil	MRSLVGTYLSIGIVLLLLGFFATGPCPDKNKDVVSHTVFVLGWPVYLYDDVVHGTATGPKWLHRQACEGGVADHAALSR
Ga0209415_110176051	3300027905	Peatlands Soil	MRSLLGLYLSIGIVLLVVGFFATGPCPDKNKDVVSDVVFVVGWPVYLYDGVVQGNAASPQWLHKQACEGGVTANRAAALTPKAN
Ga0137415_110654891	3300028536	Vadose Zone Soil	MRSLVAFYLLIGIALLALGWFATGPCPNKNLDPLSDAVFVLAWPVYLYDDVVHGTMLPPEWLHRQACEGGLRTQRAMLTR
Ga0308309_106818152	3300028906	Soil	MRIIVSLYFAIGIILLAIGFFATGPCPNKNGDVVSDVVFVLAWPVYLYGDVVAGPMTPNDWLHKQACEGGLGGQHGDTPVPAAPPAEQK
Ga0170824_1027206892	3300031231	Forest Soil	MRSLLGLYLSIGIVLLVVGFFATGPCPDKNKDVVSDVVFVVGWPVYLYDGVVQGNAASPQWLHKQACEGGVTANRAAALTPKPN
Ga0302326_114156142	3300031525	Palsa	LGIGIVLLVVGFVATGPCPDKNRDVVSDTVFVVGWPVYLYDDVAHGNASAVKWLHRQACEGGVAAGDRAAMAN
Ga0307374_100435434	3300031670	Soil	MRSLIYSYLTVGIVLLLVGFYATGYCPDKNTDLLSDLIFVMGWPGYLYRDVWHGSMTAVESLHQQACGGGLLVFPPPAIR
Ga0310813_106290152	3300031716	Soil	VRALIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELRR
Ga0307475_100180052	3300031754	Hardwood Forest Soil	MRALIALYLMIGIVLLLIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVVNGTLTPPAWLHRQACEGGKRPTQKTELAR
Ga0326597_100158444	3300031965	Soil	MRSLIGTYLSVGIVLLLIGFFATGPCPEKNKDFVSGGVFVLGWPVYLYNEVLHGDVTASQWLHRQACEGGGAANRAAAQLR
Ga0307471_1005800681	3300032180	Hardwood Forest Soil	MRALIALYLMIGIVLLLIGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVVNGTLTPPAWLHRQACEGGLRTIQKTELAR
Ga0335074_1000178013	3300032895	Soil	MGSLLGFYLTIGIVLLAIGFVATGPCPHKNRDVVSDAVFVLGWPVYLYDDVAHGNLTAPKWLHRQACEGGVVAYRVAALAR
Ga0373948_0073068_422_667	3300034817	Rhizosphere Soil	MRALIALYLIIGVVMLLLGFFATGPCPEKNTDVVSDVVFVLGWPVYLYDDVLHGTLTPPQWLHRQACEGGLRTIQKTELAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046493

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences