Metagenome Family F046279

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046279
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	45 residues
Representative Sequence	PVARVDARTVVLVAARVGKTRLIDNVVLGEGVASDIAVRA
Number of Associated Samples	124
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.32 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	86.09 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.338 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.503 % of family members)
Environment Ontology (ENVO)	Unclassified (46.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.18% β-sheet: 8.82% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF13399	LytR_C	29.14
PF01966	HD	17.88
PF04055	Radical_SAM	9.27
PF02569	Pantoate_ligase	5.30
PF01336	tRNA_anti-codon	1.99
PF00359	PTS_EIIA_2	1.99
PF02261	Asp_decarbox	0.66
PF00465	Fe-ADH	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	5.30
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.66
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.66
COG0853	Aspartate 1-decarboxylase	Coenzyme transport and metabolism [H]	0.66
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.66
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	58.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	58.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	7.28 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.62 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.30 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.62 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.30 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.62 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2.65 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.32 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.62 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.99 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.32 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.66 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.62 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.99 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.32 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.66 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Unclassified	root	N/A	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10039845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1836	Open in IMG/M
3300002562\|JGI25382J37095_10275619	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300002908\|JGI25382J43887_10175336	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300002911\|JGI25390J43892_10124013	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300002916\|JGI25389J43894_1061759	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300003152\|Ga0052254_1112938	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300004081\|Ga0063454_100698818	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300004778\|Ga0062383_10682953	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005166\|Ga0066674_10275233	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005167\|Ga0066672_10080550	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1947	Open in IMG/M
3300005171\|Ga0066677_10588416	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005172\|Ga0066683_10338531	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005180\|Ga0066685_10322100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1072	Open in IMG/M
3300005180\|Ga0066685_10322673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1071	Open in IMG/M
3300005186\|Ga0066676_10083539	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300005187\|Ga0066675_11390610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	515	Open in IMG/M
3300005406\|Ga0070703_10389844	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005440\|Ga0070705_100009203	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4905	Open in IMG/M
3300005444\|Ga0070694_100958109	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005445\|Ga0070708_101567995	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005446\|Ga0066686_11060123	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005450\|Ga0066682_10779908	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005450\|Ga0066682_10905373	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005468\|Ga0070707_101802699	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005545\|Ga0070695_101398825	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005552\|Ga0066701_10011560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	4064	Open in IMG/M
3300005552\|Ga0066701_10623322	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005558\|Ga0066698_10092023	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300005560\|Ga0066670_10242436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1091	Open in IMG/M
3300005576\|Ga0066708_10326448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300005586\|Ga0066691_10096195	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300005888\|Ga0075289_1023651	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300006032\|Ga0066696_10581970	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006034\|Ga0066656_10313791	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300006034\|Ga0066656_10600519	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006794\|Ga0066658_10229375	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300006797\|Ga0066659_10103690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1941	Open in IMG/M
3300006797\|Ga0066659_10506462	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	969	Open in IMG/M
3300006852\|Ga0075433_10576943	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300006904\|Ga0075424_100206567	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300007076\|Ga0075435_101568395	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300007258\|Ga0099793_10151385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1098	Open in IMG/M
3300007265\|Ga0099794_10253989	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300009012\|Ga0066710_103583413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	586	Open in IMG/M
3300009012\|Ga0066710_104424615	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009038\|Ga0099829_10591769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	922	Open in IMG/M
3300009089\|Ga0099828_11743426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300009095\|Ga0079224_103065629	Not Available	666	Open in IMG/M
3300009137\|Ga0066709_103087858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300009143\|Ga0099792_10032967	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300009804\|Ga0105063_1086528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300009806\|Ga0105081_1050107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	608	Open in IMG/M
3300010303\|Ga0134082_10525834	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	518	Open in IMG/M
3300010325\|Ga0134064_10003783	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300010325\|Ga0134064_10302244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	610	Open in IMG/M
3300010326\|Ga0134065_10180649	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300010326\|Ga0134065_10411324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300010329\|Ga0134111_10343799	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010333\|Ga0134080_10295331	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300010335\|Ga0134063_10127820	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1167	Open in IMG/M
3300010336\|Ga0134071_10198461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	989	Open in IMG/M
3300010337\|Ga0134062_10034925	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300010361\|Ga0126378_12791120	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	558	Open in IMG/M
3300010364\|Ga0134066_10088642	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	877	Open in IMG/M
3300010403\|Ga0134123_11711937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	680	Open in IMG/M
3300011271\|Ga0137393_11475459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300012160\|Ga0137349_1017697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1103	Open in IMG/M
3300012189\|Ga0137388_11167011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	707	Open in IMG/M
3300012189\|Ga0137388_11864564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	532	Open in IMG/M
3300012198\|Ga0137364_10038886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3099	Open in IMG/M
3300012198\|Ga0137364_10229721	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300012205\|Ga0137362_11158025	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012206\|Ga0137380_10376376	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300012206\|Ga0137380_10499543	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1072	Open in IMG/M
3300012206\|Ga0137380_10524420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1042	Open in IMG/M
3300012208\|Ga0137376_10060734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3116	Open in IMG/M
3300012209\|Ga0137379_10354503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1376	Open in IMG/M
3300012211\|Ga0137377_11968464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	500	Open in IMG/M
3300012349\|Ga0137387_10994609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	602	Open in IMG/M
3300012354\|Ga0137366_10019106	All Organisms → cellular organisms → Bacteria	5356	Open in IMG/M
3300012355\|Ga0137369_10715911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	687	Open in IMG/M
3300012357\|Ga0137384_10705323	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	819	Open in IMG/M
3300012360\|Ga0137375_10247759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1647	Open in IMG/M
3300012361\|Ga0137360_10670478	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300012361\|Ga0137360_11827724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	513	Open in IMG/M
3300012683\|Ga0137398_10334056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1023	Open in IMG/M
3300012685\|Ga0137397_10225585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1395	Open in IMG/M
3300012896\|Ga0157303_10175841	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012918\|Ga0137396_10382099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1043	Open in IMG/M
3300012918\|Ga0137396_10413217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1000	Open in IMG/M
3300012923\|Ga0137359_10575410	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	989	Open in IMG/M
3300012930\|Ga0137407_11553219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	630	Open in IMG/M
3300012931\|Ga0153915_10196610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2210	Open in IMG/M
3300015356\|Ga0134073_10013046	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300017654\|Ga0134069_1156529	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	763	Open in IMG/M
3300017656\|Ga0134112_10033475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1818	Open in IMG/M
3300017656\|Ga0134112_10395513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300017657\|Ga0134074_1154883	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	802	Open in IMG/M
3300017659\|Ga0134083_10268019	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300018084\|Ga0184629_10237605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	950	Open in IMG/M
3300018433\|Ga0066667_10014814	All Organisms → cellular organisms → Bacteria	3925	Open in IMG/M
3300018433\|Ga0066667_10226406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1397	Open in IMG/M
3300018433\|Ga0066667_11564381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	585	Open in IMG/M
3300018482\|Ga0066669_10701272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	892	Open in IMG/M
3300018482\|Ga0066669_12333010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300019789\|Ga0137408_1173531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2016	Open in IMG/M
3300019878\|Ga0193715_1021865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1389	Open in IMG/M
3300020170\|Ga0179594_10276694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	634	Open in IMG/M
3300021081\|Ga0210379_10296350	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300021559\|Ga0210409_11687126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300024246\|Ga0247680_1031552	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300025319\|Ga0209520_10348062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	899	Open in IMG/M
3300025322\|Ga0209641_11059800	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	521	Open in IMG/M
3300025910\|Ga0207684_10639201	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025910\|Ga0207684_11368760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300025910\|Ga0207684_11587816	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300025922\|Ga0207646_10257514	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1577	Open in IMG/M
3300026089\|Ga0207648_10691671	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300026297\|Ga0209237_1030420	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300026298\|Ga0209236_1028953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2985	Open in IMG/M
3300026298\|Ga0209236_1114662	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300026300\|Ga0209027_1024397	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2291	Open in IMG/M
3300026300\|Ga0209027_1182907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	685	Open in IMG/M
3300026301\|Ga0209238_1077013	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1166	Open in IMG/M
3300026307\|Ga0209469_1052311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1284	Open in IMG/M
3300026307\|Ga0209469_1086124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	923	Open in IMG/M
3300026310\|Ga0209239_1157390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	892	Open in IMG/M
3300026318\|Ga0209471_1307024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	526	Open in IMG/M
3300026324\|Ga0209470_1038649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2378	Open in IMG/M
3300026324\|Ga0209470_1315662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300026326\|Ga0209801_1301029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	572	Open in IMG/M
3300026328\|Ga0209802_1169494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	894	Open in IMG/M
3300026329\|Ga0209375_1251385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	593	Open in IMG/M
3300026524\|Ga0209690_1016311	All Organisms → cellular organisms → Bacteria	3838	Open in IMG/M
3300026548\|Ga0209161_10035513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3394	Open in IMG/M
3300026555\|Ga0179593_1254619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3210	Open in IMG/M
3300027032\|Ga0209877_1023850	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	596	Open in IMG/M
3300027846\|Ga0209180_10217160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1102	Open in IMG/M
3300027882\|Ga0209590_10444652	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300027882\|Ga0209590_10560475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	736	Open in IMG/M
3300028536\|Ga0137415_10074849	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300028884\|Ga0307308_10246058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	857	Open in IMG/M
3300031229\|Ga0299913_11254126	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300031576\|Ga0247727_10551758	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300031962\|Ga0307479_10058370	All Organisms → cellular organisms → Bacteria	3718	Open in IMG/M
3300032180\|Ga0307471_101867593	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300032180\|Ga0307471_103749137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300033502\|Ga0326731_1058233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	901	Open in IMG/M
3300033811\|Ga0364924_003932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2594	Open in IMG/M
3300033812\|Ga0364926_036780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	924	Open in IMG/M
3300034177\|Ga0364932_0284071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.38%
Aquatic	Environmental → Aquatic	3.97%
Plants	Host-Associated → Plants	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.07%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Floodplain	Environmental → Terrestrial → Floodplain	1.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.99%
Sediment	Environmental → Aquatic → Sediment	1.32%
Peat	Environmental → Terrestrial → Peat	0.66%
Cave	Environmental → Terrestrial → Cave	0.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.81%
Loam	Environmental → Terrestrial → Soil → Loam	8.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.31%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.99%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.66%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.99%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.32%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.66%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.66%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.66%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.66%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.66%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.66%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_100398452	3300002562	Grasslands Soil	VKRLTAHTVAVVAARVGTTRLIDNVVLGEGIGADPRVAP*
JGI25382J37095_102756192	3300002562	Grasslands Soil	LIDENLEPVKRLTAHTVAVVAARVGTTRLIDNVVLGEGIGADPRVTP*
JGI25382J43887_101753361	3300002908	Grasslands Soil	LVDDNVQPVSRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
JGI25390J43892_101240132	3300002911	Grasslands Soil	QMRPVARVDARTVVLVAAKVGKTRLIDNVVLGEGIAGDVSVRTT*
JGI25389J43894_10617592	3300002916	Grasslands Soil	VDEQMRPVARVDARTAVLVAAKVGTTRLIDNVVLGEGVAADTAVRA*
Ga0052254_11129382	3300003152	Sediment	VVPEYLHVLGAELQPITRADAATVVVVAARVGATRLIDNVVLGEGMAHDVAVRSA*
Ga0063454_1006988181	3300004081	Soil	SGALPEYCALIDENLQPVTRVTARTVAAVAARVGKTRLLDSVVLGEGIGADPRVSP*
Ga0062383_106829531	3300004778	Wetland Sediment	PITRVTPHTVAAVAARVGKTRLIDNVVLGEGVGADPRVTP*
Ga0066674_102752332	3300005166	Soil	VARVDARTAVLVAAKVGKTRLIDNVVLGEGVASDISVRALA*
Ga0066672_100805504	3300005167	Soil	ALVDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAGDVSVRAS*
Ga0066677_105884162	3300005171	Soil	VDEQLRPVARADARTVVAIAAHVGATRLIDNVVLGEGVAGDVSVRAS*
Ga0066683_103385311	3300005172	Soil	RLRPVARADARTVVVIAARVGTTRLIDNVVLGEGVASDVSVRAS*
Ga0066685_103221003	3300005180	Soil	VARADARTVVVVAAAVGGTRLIDNVVLGEGMANDIAVRAS*
Ga0066685_103226733	3300005180	Soil	MRPVARVDARTAVLVAAKVGTTRLIDNVVLGEGVAADTAVRA*
Ga0066676_100835391	3300005186	Soil	RVGLETMHGPGVIPEYCALIDEDLQAVTRVTARTVAVVAARLGKTRLIDNVVLGEGVGADPRVTP*
Ga0066675_113906102	3300005187	Soil	VARADARTVVVIAAHVGATRLIDNVVLGEGVAGDIAVRT*
Ga0070703_103898441	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	HLRPVERVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0070705_1000092037	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	QMRPVTRVDAKTIALVAARVGAAGTRLIDNVVLGEGIANDVPVRGAVKA*
Ga0070694_1009581091	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GVIPEYCALIDENLRPVERVTARTVAVVAARIGKTRLLDNVVLGEGIAADPRTKP*
Ga0070708_1015679952	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RPVERLTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0066686_110601231	3300005446	Soil	PVARVDARTVVLVAARVGKTRLIDNVVLGEGVASDIAVRA*
Ga0066682_107799082	3300005450	Soil	VDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAGDVSVRAS*
Ga0066682_109053731	3300005450	Soil	VDEQLRPVARADARTVVVIAAQVGPTRLIDNVVLGEGVARDVSVRT*
Ga0070707_1018026992	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PVERVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0070695_1013988251	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EAMHAPGVIAEYCSLVDENVQPVSRVTAHTVGVVAALVGKTRLLDNVVLGEGIGADPRVTP*
Ga0066701_100115601	3300005552	Soil	RAVVVIAARVGATRLIDNVVLGEGVAGDVAVGGRA*
Ga0066701_106233222	3300005552	Soil	VTRVTAHTVGVVAARVGKTRLLDNVVLGEGIGADPRVKP*
Ga0066698_100920231	3300005558	Soil	LQPVSRVTAHTVAAVAARVGKTRLLDNVVLGEGIGADPRVTR*
Ga0066670_102424364	3300005560	Soil	VARVDARTIVLVAARVGKTRLLDNVVLGEGIAGDVSVRTT*
Ga0066708_103264481	3300005576	Soil	EQLRPVARVDARTVVVIAAQVGATRLIDNVVLGEGVGSDIAVRAS*
Ga0066691_100961954	3300005586	Soil	EAMRPVKQADARAVVVIAARVGATRLIDNVVLGEGVAGDIAVANRA*
Ga0075289_10236511	3300005888	Rice Paddy Soil	ARADARTVVVVAARVGTTRLRVGTTRLIDNVILGEGMAADPTVRV*
Ga0066696_105819701	3300006032	Soil	DARTVVVIAAQVGPTRLIDNVVLGEGVARDVSVRT*
Ga0066656_103137913	3300006034	Soil	VTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0066656_106005191	3300006034	Soil	RADARTVVMIAAQVGTTRLIDNVVLGEGVGGDISVRA*
Ga0066658_102293753	3300006794	Soil	ELVDEQLRPVARADARTVVAIAAHVGATRLIDNVVLGEGVAGDVSVRAS*
Ga0066659_101036901	3300006797	Soil	ELRAVARADARTVVAVAARVGATRLIDNVVLGEGVASDESVRTT*
Ga0066659_105064621	3300006797	Soil	DARTVVLVAAVVGATRLIDNVVLGEGMANDIAVRAS*
Ga0075433_105769431	3300006852	Populus Rhizosphere	TQTTVALVAARVGETRLIDNVILGEGVGADPTVSA*
Ga0075424_1002065675	3300006904	Populus Rhizosphere	PVTRVTAHTVGVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0075435_1015683951	3300007076	Populus Rhizosphere	MRPVARVDARTVVLVAARIGKTRLIDNVVLGEGIAGDIAVRA*
Ga0099793_101513851	3300007258	Vadose Zone Soil	LELVDEQIRPVARADARTVVLIAAQVGTTRLIDNVVLGEGVGGDISVRA*
Ga0099794_102539893	3300007265	Vadose Zone Soil	VGRATARTIVVVAARVGATRLIDNVVLGEGLAADPAVRP*
Ga0066710_1035834131	3300009012	Grasslands Soil	PVSRITARTVAVVAARIGKTRLLDNVVLGEGIGADPRVSP
Ga0066710_1044246152	3300009012	Grasslands Soil	VDEELRPVERVTARTVVLVATRVGATRLIDNVVLGEGIAADPTVRS
Ga0099829_105917691	3300009038	Vadose Zone Soil	NAKTIVVVAARVGSTRLIDNVVLGEGVGADPTVRA*
Ga0099828_117434261	3300009089	Vadose Zone Soil	EYCALVDENLQPVSRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTR*
Ga0079224_1030656293	3300009095	Agricultural Soil	ARVDVRTIVAVAARVGSTRLIDNIVLGEGLRAGSA*
Ga0066709_1030878582	3300009137	Grasslands Soil	ARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT*
Ga0099792_100329671	3300009143	Vadose Zone Soil	PGYLELVDEQIRAVARADARTVVMIAAQVGTTRLIDNVVLGEGVGGDISVRA*
Ga0105063_10865281	3300009804	Groundwater Sand	IPEYCALVDEDVRPVARVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0105081_10501071	3300009806	Groundwater Sand	RVTQKTIAVVAARVGRTRLIDNVVLGDGLGADPTIRS*
Ga0134082_105258342	3300010303	Grasslands Soil	LRHVARVDARTVVVIAAQVGPTRLIDNVVLGEGVARDVSVRA*
Ga0134064_100037836	3300010325	Grasslands Soil	VDEQMRPVARVDARTVVLVAARVGKTRLIDNVVLGEGVASDIAVRA*
Ga0134064_103022441	3300010325	Grasslands Soil	PEYLALVDDQMRPVARVDARTAVLVAAKVGKTRLIDNVVLGEGVAADPAVRA*
Ga0134065_101806492	3300010326	Grasslands Soil	DARTVVLVAAKVGKTRLIDNVVLGEGVASDTSVRA*
Ga0134065_104113242	3300010326	Grasslands Soil	TARTVAVVAARIGKTRLLDNVVLGEGIGADPRVAP*
Ga0134111_103437992	3300010329	Grasslands Soil	EELQPVARVTARTVVVVAARVGNTRLIDNVALGEGIAADPTVRP*
Ga0134080_102953312	3300010333	Grasslands Soil	VDDQMRPVARVDARTAVLVAAKVGKTRLIDNVVLGEGVAADPAVRA*
Ga0134063_101278201	3300010335	Grasslands Soil	ARTVVVIAARVGTTRLIDNVVLGEGVAGDVSVRAS*
Ga0134071_101984611	3300010336	Grasslands Soil	ENLQPVSRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0134062_100349251	3300010337	Grasslands Soil	DARTVVVVAARVGTTRLIDNVVLGEGVASDVSVRAS*
Ga0126378_127911201	3300010361	Tropical Forest Soil	EYLALVDDHLRPVERVTQATVALVAARVGTTRLIDNVVLGEGVGADPTVAP*
Ga0134066_100886421	3300010364	Grasslands Soil	QRVGLETMHDPGVIPEYCALIDEDLQAVTRVTARAVAVVAARLGKTRLIDNVVLGEGVGADPRVTP*
Ga0134123_117119371	3300010403	Terrestrial Soil	ALIDENLRPVERVTARTVAVVAARIGKTRLLDNVVLGEGIAADPRTKP*
Ga0137393_114754591	3300011271	Vadose Zone Soil	LMAPGVTPGYLELVDEQIRAVARADARTVVMIAAQVGTTRLIDNVVLGEGVGGDISVRA*
Ga0137349_10176973	3300012160	Soil	PNHGAGPRSILAGAIRVGPRRLIDNVVLGEGVAADPVVRG*
Ga0137388_111670111	3300012189	Vadose Zone Soil	PVSRVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVAP*
Ga0137388_118645642	3300012189	Vadose Zone Soil	VDDHLRPVERVTQATVALVAARLGTTRLIDNVVLGEGVGADPTVDA*
Ga0137364_100388861	3300012198	Vadose Zone Soil	KLQRAGLEAMHAPGVIPEYCALVDEHVQPVTRVTAHAIGVVAARVGKTRLLDNVVLGEGIGADPRVAR*
Ga0137364_102297213	3300012198	Vadose Zone Soil	VDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT*
Ga0137362_111580252	3300012205	Vadose Zone Soil	LVDENVQPVTRVKAHTVGVVAARVGRTRLLDNVVLGEGIGADPRVTP*
Ga0137380_103763763	3300012206	Vadose Zone Soil	EYLALVDEELRPVARVDARTVVLVAARVGPTRLIDHVVLGEGVASDVPVRGS*
Ga0137380_104995431	3300012206	Vadose Zone Soil	RPVARVDARTVVVIAARVGTTRLIDNVVLGEGVASDVSVRAS*
Ga0137380_105244203	3300012206	Vadose Zone Soil	VDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT*
Ga0137376_100607341	3300012208	Vadose Zone Soil	LRPVARADARTVVVIAAQVGPTRLIDNVVLGEGVAGDITVPAS*
Ga0137379_103545031	3300012209	Vadose Zone Soil	DARTVVVIAARVGTTRLIDNVVLGEGVAGDVSVRAS*
Ga0137377_119684642	3300012211	Vadose Zone Soil	LRPVARADARTVVVIAAQVGPTRLIDNVVLGEGVARDVSVRAS*
Ga0137387_109946091	3300012349	Vadose Zone Soil	DEQMRSVARVDARTVVLVAAKVGTTRLIDNVVLGEGVAADPAVRA*
Ga0137366_100191061	3300012354	Vadose Zone Soil	PEYCALVDEDVQPVSRVTARTVAVVAARIGKTRLLDNVVLGEGIGADPRVGP*
Ga0137369_107159112	3300012355	Vadose Zone Soil	LEVLKAPGVTPAYLALVDDELHSVARADARTVVVVAAKVGATRLIDNVVLGEGVASDISVRG*
Ga0137384_107053231	3300012357	Vadose Zone Soil	ENLQPVSRVTAHTVGVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0137375_102477594	3300012360	Vadose Zone Soil	VARADARTVVVVAARVGATRLIDNVVLGEGVASDISVRA*
Ga0137360_106704783	3300012361	Vadose Zone Soil	EYLALVDDQMRPVSRADARSVVVIAARVGTTRLIDNVVLGEGVANDIAVRAS*
Ga0137360_118277242	3300012361	Vadose Zone Soil	DEDVHPVSRVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVKP*
Ga0137398_103340563	3300012683	Vadose Zone Soil	MSRADARSVVVIAARVGTTRLIDNVVLGEGVANDIAVRAS*
Ga0137397_102255851	3300012685	Vadose Zone Soil	MRASGALPEYCALIDEELRPVERVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0157303_101758412	3300012896	Soil	VIPEYCALIDEHLRPVERVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0137396_103820993	3300012918	Vadose Zone Soil	TAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0137396_104132171	3300012918	Vadose Zone Soil	LVDENVQPVSRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP*
Ga0137359_105754101	3300012923	Vadose Zone Soil	QTLMAPGVTPGYLELVDEQIRAVARADARTVVMIAAQVGTTRLIDNVVLGEGVGGDISVRA*
Ga0137407_115532191	3300012930	Vadose Zone Soil	YLALVDEELQPVTRVTARSVAILAARLGATRLIDNVVLGEGVAADATVRA*
Ga0153915_101966101	3300012931	Freshwater Wetlands	EYFALVDGGLTPVDRVTQTTVVLVAARVGTTRLIDNVVLGEGVGADPTVRG*
Ga0134073_100130463	3300015356	Grasslands Soil	ARVDARTVVLVAAKVGKTRLIDNVVLGEGVAADPAVRA*
Ga0134069_11565291	3300017654	Grasslands Soil	DEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT
Ga0134112_100334751	3300017656	Grasslands Soil	DARTVVVIAAKIGATRLIDNVVLGEGIASDVAVRGM
Ga0134112_103955132	3300017656	Grasslands Soil	PVTRVDARTVVVIAARVGTTRLIDNVVLGEGVAGDIAVRA
Ga0134074_11548831	3300017657	Grasslands Soil	LIDENLQPVTRVTAHTIGVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0134083_102680191	3300017659	Grasslands Soil	ETMHGPGVIPEYCALIDEALQAVTRVTARTVAVVAARLGKTRLIDNVVLGEGVGADPRVT
Ga0184629_102376053	3300018084	Groundwater Sediment	DRVTQKTIAVVAARVGRTRLIDNVVLGDGLGADPTIRS
Ga0066667_100148147	3300018433	Grasslands Soil	LRPVARVDARTVVVIAAQVGATRLIDNVVLGEGVGSDIAVRV
Ga0066667_102264061	3300018433	Grasslands Soil	CALVDENVQPVTRVTAHTVGVVAARVGKTRLLDNVVLGEGIGADPRVKP
Ga0066667_115643811	3300018433	Grasslands Soil	LVDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAGDVSVRAS
Ga0066669_107012723	3300018482	Grasslands Soil	PVARVDARTVVVIAAQVGATRLIDNVVLGEGVGSDIAVRAS
Ga0066669_123330102	3300018482	Grasslands Soil	ALVDEALAPVERVTARTIVLVAARVGATRLIDNVVLGEGLAADPAVRA
Ga0137408_11735314	3300019789	Vadose Zone Soil	VARADARTVVLIAAQVGTTRLIDNVVLGEGVGGDISVRA
Ga0193715_10218651	3300019878	Soil	LRPAARVDAHTVVAVAARVGTTRLIDNVVLGEGIAADTAVRA
Ga0179594_102766942	3300020170	Vadose Zone Soil	RVDARSVVLVAGRVGKTRLIDNVVLGEGVAGDIAVRP
Ga0210379_102963501	3300021081	Groundwater Sediment	LALIDEGCRPVERATAATIVVTAARVGPVRLIDNVILGEGVAADPTVSA
Ga0210409_116871262	3300021559	Soil	GEHLRPLTRPDARTVVLVAARVGATRLIDNVVLGEGLAGDVSVRGS
Ga0247680_10315523	3300024246	Soil	VTAKTVVVLAGRVGATRLIDNVVIADGVSSDPTVRS
Ga0209520_103480621	3300025319	Soil	RPVTRATPRTVTVVAARVGATRLIDNVVLGEGVAADPTVRP
Ga0209641_110598001	3300025322	Soil	LVDEDLRPVTRATPRTVTVVAARVGATRLIDNVVLGEGVAADPTVRP
Ga0207684_106392011	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ERVTQATVALVAARLGTTRLIDNVVLGEGVGADPTVDA
Ga0207684_113687602	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RVDARTVVLIAARVGTTRLIDNVVLGEGVAGDVSVRAS
Ga0207684_115878161	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DIQPVNRVTARTVAVIAARVGKTRLLDNVVLGEGIGADPRVRA
Ga0207646_102575144	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PVERVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0207648_106916711	3300026089	Miscanthus Rhizosphere	PEYCALIDEHLRPVERVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0209237_10304201	3300026297	Grasslands Soil	DARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT
Ga0209236_10289535	3300026298	Grasslands Soil	GVSPGYLELVDEQLRPVARVDARTVVVIAAQVGATRLIDNVVLGEGVASDIAVRTS
Ga0209236_11146621	3300026298	Grasslands Soil	VDEQMRSVARVDARTVVLVAAKVGKTRLIDNVVLGEGVAADPAVRA
Ga0209027_10243971	3300026300	Grasslands Soil	QMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT
Ga0209027_11829072	3300026300	Grasslands Soil	RPVARVDARTVVLVAAKIGKTRLIDNVVLGEGIAGDVSVRTT
Ga0209238_10770133	3300026301	Grasslands Soil	LVDEQMRPVARVDARTVVLVAARVGKTRLIDNVVLGEGVASDIAVRA
Ga0209469_10523111	3300026307	Soil	LQPVSRVTAHTVAAVAARVGKTRLLDNVVLGEGIGADPRVTR
Ga0209469_10861243	3300026307	Soil	VSPGYLELVDEQLRPVARVDARSVVVIAAQVGATRLIDNVVLGEGIAGDVAVRGP
Ga0209239_11573901	3300026310	Grasslands Soil	ARVDARTVVLVAAKVGKTRLIDNVVLGEGVAADPAVRA
Ga0209471_13070241	3300026318	Soil	RVAARTVVLVAAKVGRTRLIDNVVLGEGIANDVSVRTA
Ga0209470_10386491	3300026324	Soil	CALIDEDLQAVTRVTARTVAVVAARLGKTRLIDNVVLGEGVGADPRVTP
Ga0209470_13156621	3300026324	Soil	AIVGEAVRPVKQADARAVVVIAARVGATRLIDNVVLGEGVAGDVAVGGRA
Ga0209801_13010291	3300026326	Soil	YLALVDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT
Ga0209802_11694941	3300026328	Soil	LALVDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT
Ga0209375_12513851	3300026329	Soil	LALVDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAGDVSVRAS
Ga0209690_10163116	3300026524	Soil	ALVDEQMRPVARVDARTVVVIAARVGTTRLIDNVVLGEGVAADTAVRT
Ga0209161_100355131	3300026548	Soil	VTARTVVLVATRVGATRLIDNVVLGEGIAADPTVRS
Ga0179593_12546196	3300026555	Vadose Zone Soil	SVTRVDARSVVLVAWRVGKTRLIDNVVLGEGVAGDIAVRP
Ga0209877_10238501	3300027032	Groundwater Sand	EDVRPVARVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0209180_102171604	3300027846	Vadose Zone Soil	GVTPEYLVLVDRSLRPVSRVDARTVALVAAKVGSTRLIDNVVLGDGMAADTAVRA
Ga0209590_104446521	3300027882	Vadose Zone Soil	ALVDEHVQPVRRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVKP
Ga0209590_105604751	3300027882	Vadose Zone Soil	DQMRPVSRADAHSVVVIAARVGTTRLIDNVVLGEGVANDIAVRAS
Ga0137415_100748496	3300028536	Vadose Zone Soil	VSRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0307308_102460581	3300028884	Soil	ALVDENVQPVGRVTAHTVAVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0299913_112541261	3300031229	Soil	PEYLALVDEGLQPVDRADARSIALIAGRVGSARLIDNVVLGAGVAADPVVSG
Ga0247727_105517583	3300031576	Biofilm	LRPVGRATARTIVVLAARVGGTRLIDNVVLGDGLAADPTVGR
Ga0307479_100583706	3300031962	Hardwood Forest Soil	LRPVTRADARTAVLLAARVGRTRLIDNVVLGEGVAADPAVRTS
Ga0307471_1018675931	3300032180	Hardwood Forest Soil	RVTARTVAVVAARLGKTRLIDNVVLGDGVGADPRVTP
Ga0307471_1037491371	3300032180	Hardwood Forest Soil	CALVDENVQPVTRVTAHTIGVVAARVGKTRLLDNVVLGEGIGADPRVTP
Ga0326731_10582331	3300033502	Peat Soil	LADGGLARVDRVTQTTVALVAARVGTTRLIDNVVLGAGVGADPTVRG
Ga0364924_003932_2487_2594	3300033811	Sediment	TQKTIAVVAARVGPTRLIDNVVLGDGLGADPTIRS
Ga0364926_036780_766_924	3300033812	Sediment	PEYCALVDEGLQGVSRVTARTVAVVAARVGKTRLLDNVVLGEGIGADPRVAP
Ga0364932_0284071_2_142	3300034177	Sediment	VDEELKPVDRVTQKTIAVVAARVGPTRLIDNVVLGDGIGADPSIRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046279

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences