Metagenome / Metatranscriptome Family F045980

Basic Information
Family ID	F045980
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	40 residues
Representative Sequence	TDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Number of Associated Samples	114
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.63 %
% of genes near scaffold ends (potentially truncated)	90.79 %
% of genes from short scaffolds (< 2000 bps)	80.26 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Unclassified (49.342 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.816 % of family members)
Environment Ontology (ENVO)	Unclassified (24.342 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.974 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 0.00% Coil/Unstructured: 53.73%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF13088	BNR_2	6.58
PF01145	Band_7	3.29
PF00749	tRNA-synt_1c	0.66
PF01039	Carboxyl_trans	0.66
PF00144	Beta-lactamase	0.66
PF03965	Penicillinase_R	0.66
PF01258	zf-dskA_traR	0.66
PF02417	Chromate_transp	0.66
PF00296	Bac_luciferase	0.66
PF07676	PD40	0.66
PF00166	Cpn10	0.66
PF08352	oligo_HPY	0.66
PF02082	Rrf2	0.66
PF05345	He_PIG	0.66
PF00291	PALP	0.66
PF07690	MFS_1	0.66
PF00083	Sugar_tr	0.66
PF04185	Phosphoesterase	0.66
PF03466	LysR_substrate	0.66
PF02472	ExbD	0.66
PF05943	VipB	0.66
PF13470	PIN_3	0.66
PF04471	Mrr_cat	0.66
PF04984	Phage_sheath_1	0.66
PF00873	ACR_tran	0.66
PF14464	Prok-JAB	0.66
PF00962	A_deaminase	0.66
PF09278	MerR-DNA-bind	0.66
PF13288	DXPR_C	0.66
PF02348	CTP_transf_3	0.66
PF07681	DoxX	0.66
PF02441	Flavoprotein	0.66
PF05137	PilN	0.66
PF03544	TonB_C	0.66
PF07075	DUF1343	0.66
PF07978	NIPSNAP	0.66
PF04686	SsgA	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG3166	Type IV pilus assembly protein PilN	Cell motility [N]	1.32
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.66
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.66
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.66
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.66
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.66
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.66
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.66
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.66
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.66
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.66
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.66
COG3517	Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB family	Intracellular trafficking, secretion, and vesicular transport [U]	0.66
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.66
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.66
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.66
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.66
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.66
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.66
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.66
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.66
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.66
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.66
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.66
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.66
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.66
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.66
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.66
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.66
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	0.66
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.66 %
Unclassified	root	N/A	49.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.66 %
Unclassified	root	N/A	49.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.32 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.66 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.32 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.66 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.66 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.66 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.66 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.66 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.58 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.32 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.66 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.66 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.66 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.61 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	3.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.66 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.66 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	0.66 %
Bryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta	0.66 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	2.63 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.32 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.66 %
Bryophytina	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.66 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.66 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.66 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.63 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.32 %
Bryopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida	0.66 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	0.66 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.66 %
Streptomyces acidiscabies	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces acidiscabies	0.66 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.66 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.63 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.32 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	0.66 %
Bryopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida	0.66 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.66 %
Streptomyces acidiscabies	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces acidiscabies	0.66 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.66 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.63 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.32 %
Marasmiaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae	0.66 %
Bryopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida	0.66 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.66 %
Streptomyces acidiscabies	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces acidiscabies	0.66 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.66 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.63 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.32 %
Marasmius	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Marasmius	0.66 %
Bryopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida	0.66 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.66 %
Streptomyces acidiscabies	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces acidiscabies	0.66 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.66 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.29 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.63 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.32 %
Marasmius oreades	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Marasmius → Marasmius oreades	0.66 %
Bryopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida	0.66 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.66 %
Streptomyces acidiscabies	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces acidiscabies	0.66 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.66 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001082\|JGI12664J13189_1000529	All Organisms → cellular organisms → Bacteria	5391	Open in IMG/M
3300001154\|JGI12636J13339_1000407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7123	Open in IMG/M
3300002245\|JGIcombinedJ26739_100412397	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300002245\|JGIcombinedJ26739_101497434	Not Available	570	Open in IMG/M
3300004092\|Ga0062389_102708825	Not Available	661	Open in IMG/M
3300004476\|Ga0068966_1095001	Not Available	604	Open in IMG/M
3300005454\|Ga0066687_10883829	Not Available	532	Open in IMG/M
3300005529\|Ga0070741_10107007	All Organisms → cellular organisms → Bacteria → Acidobacteria	2943	Open in IMG/M
3300005534\|Ga0070735_10038950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	3231	Open in IMG/M
3300005542\|Ga0070732_10025006	All Organisms → cellular organisms → Bacteria → Acidobacteria	3380	Open in IMG/M
3300005554\|Ga0066661_10784801	Not Available	557	Open in IMG/M
3300005560\|Ga0066670_10213488	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005712\|Ga0070764_10000156	All Organisms → cellular organisms → Bacteria → Acidobacteria	23569	Open in IMG/M
3300005764\|Ga0066903_100009650	All Organisms → cellular organisms → Bacteria	9106	Open in IMG/M
3300005764\|Ga0066903_102475555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300005921\|Ga0070766_10245289	All Organisms → cellular organisms → Bacteria → Acidobacteria	1134	Open in IMG/M
3300006050\|Ga0075028_100032482	All Organisms → cellular organisms → Bacteria → Acidobacteria	2402	Open in IMG/M
3300006050\|Ga0075028_100834843	Not Available	563	Open in IMG/M
3300006172\|Ga0075018_10349837	Not Available	740	Open in IMG/M
3300006173\|Ga0070716_100930816	Not Available	683	Open in IMG/M
3300006176\|Ga0070765_100008003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	7195	Open in IMG/M
3300006176\|Ga0070765_101572476	Not Available	618	Open in IMG/M
3300006852\|Ga0075433_10002035	All Organisms → cellular organisms → Bacteria	15272	Open in IMG/M
3300006903\|Ga0075426_10074928	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300007982\|Ga0102924_1162974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300009038\|Ga0099829_10835183	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009090\|Ga0099827_10536887	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300009523\|Ga0116221_1220190	Not Available	821	Open in IMG/M
3300009524\|Ga0116225_1031012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2655	Open in IMG/M
3300009698\|Ga0116216_10026768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3601	Open in IMG/M
3300009824\|Ga0116219_10000268	All Organisms → cellular organisms → Bacteria	55195	Open in IMG/M
3300009824\|Ga0116219_10109641	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300009824\|Ga0116219_10559614	Not Available	630	Open in IMG/M
3300009839\|Ga0116223_10029452	All Organisms → cellular organisms → Bacteria → Proteobacteria	3744	Open in IMG/M
3300010076\|Ga0127430_134909	Not Available	608	Open in IMG/M
3300010126\|Ga0127482_1110897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300010326\|Ga0134065_10513401	Not Available	501	Open in IMG/M
3300010379\|Ga0136449_100050917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9314	Open in IMG/M
3300010379\|Ga0136449_100123626	All Organisms → cellular organisms → Bacteria	5187	Open in IMG/M
3300010379\|Ga0136449_100148042	All Organisms → cellular organisms → Bacteria → Acidobacteria	4617	Open in IMG/M
3300010379\|Ga0136449_101582691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	997	Open in IMG/M
3300010379\|Ga0136449_103082636	Not Available	648	Open in IMG/M
3300012198\|Ga0137364_11420962	Not Available	513	Open in IMG/M
3300012200\|Ga0137382_10735545	Not Available	708	Open in IMG/M
3300012209\|Ga0137379_10119777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2531	Open in IMG/M
3300012212\|Ga0150985_122418599	Not Available	660	Open in IMG/M
3300012375\|Ga0134034_1209536	Not Available	512	Open in IMG/M
3300012410\|Ga0134060_1359962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	926	Open in IMG/M
3300012923\|Ga0137359_10918041	Not Available	754	Open in IMG/M
3300014657\|Ga0181522_10059465	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300014657\|Ga0181522_10529433	Not Available	711	Open in IMG/M
3300016705\|Ga0181507_1386043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	712	Open in IMG/M
3300017927\|Ga0187824_10346650	Not Available	535	Open in IMG/M
3300017948\|Ga0187847_10542530	Not Available	647	Open in IMG/M
3300017955\|Ga0187817_10197360	Not Available	1283	Open in IMG/M
3300017959\|Ga0187779_11152447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	543	Open in IMG/M
3300017966\|Ga0187776_10973592	Not Available	621	Open in IMG/M
3300017995\|Ga0187816_10074917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300018007\|Ga0187805_10277420	Not Available	770	Open in IMG/M
3300018009\|Ga0187884_10251679	Not Available	719	Open in IMG/M
3300018085\|Ga0187772_10746375	Not Available	704	Open in IMG/M
3300018088\|Ga0187771_10108503	Not Available	2246	Open in IMG/M
3300019161\|Ga0184602_117509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	631	Open in IMG/M
3300019163\|Ga0184581_106221	Not Available	1259	Open in IMG/M
3300019268\|Ga0181514_1509434	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Bryophyta → Bryophytina → Bryopsida	1156	Open in IMG/M
3300019786\|Ga0182025_1357765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300020580\|Ga0210403_10741773	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300020580\|Ga0210403_10892916	Not Available	701	Open in IMG/M
3300020581\|Ga0210399_10029427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4383	Open in IMG/M
3300020582\|Ga0210395_11186006	Not Available	561	Open in IMG/M
3300021088\|Ga0210404_10183489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300021170\|Ga0210400_10446129	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300021170\|Ga0210400_11236890	Not Available	600	Open in IMG/M
3300021180\|Ga0210396_10083078	All Organisms → cellular organisms → Bacteria → Acidobacteria	2906	Open in IMG/M
3300021405\|Ga0210387_10892797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	782	Open in IMG/M
3300021405\|Ga0210387_11705980	Not Available	533	Open in IMG/M
3300021407\|Ga0210383_10306466	All Organisms → cellular organisms → Bacteria → Acidobacteria	1366	Open in IMG/M
3300021479\|Ga0210410_10010275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces acidiscabies	8076	Open in IMG/M
3300021559\|Ga0210409_10293531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1466	Open in IMG/M
3300021559\|Ga0210409_10499928	Not Available	1079	Open in IMG/M
3300022502\|Ga0242646_1039866	Not Available	507	Open in IMG/M
3300022503\|Ga0242650_1016128	Not Available	592	Open in IMG/M
3300022503\|Ga0242650_1026144	Not Available	509	Open in IMG/M
3300022504\|Ga0242642_1019065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300022504\|Ga0242642_1054736	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300022504\|Ga0242642_1062588	Not Available	599	Open in IMG/M
3300022505\|Ga0242647_1012415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	781	Open in IMG/M
3300022508\|Ga0222728_1101214	Not Available	546	Open in IMG/M
3300022509\|Ga0242649_1021938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300022510\|Ga0242652_1017534	Not Available	744	Open in IMG/M
3300022513\|Ga0242667_1059030	Not Available	504	Open in IMG/M
3300022522\|Ga0242659_1073145	Not Available	641	Open in IMG/M
3300022523\|Ga0242663_1048353	Not Available	742	Open in IMG/M
3300022523\|Ga0242663_1073311	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300022525\|Ga0242656_1061253	All Organisms → cellular organisms → Eukaryota	672	Open in IMG/M
3300022525\|Ga0242656_1090619	Not Available	586	Open in IMG/M
3300022527\|Ga0242664_1010306	Not Available	1301	Open in IMG/M
3300022527\|Ga0242664_1052650	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300022527\|Ga0242664_1055616	Not Available	733	Open in IMG/M
3300022528\|Ga0242669_1066872	Not Available	644	Open in IMG/M
3300022528\|Ga0242669_1122328	Not Available	524	Open in IMG/M
3300022529\|Ga0242668_1095766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	596	Open in IMG/M
3300022530\|Ga0242658_1174453	Not Available	570	Open in IMG/M
3300022530\|Ga0242658_1212464	Not Available	531	Open in IMG/M
3300022531\|Ga0242660_1192472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300022532\|Ga0242655_10153213	Not Available	677	Open in IMG/M
3300022532\|Ga0242655_10304046	Not Available	520	Open in IMG/M
3300022533\|Ga0242662_10151790	Not Available	701	Open in IMG/M
3300022715\|Ga0242678_1003784	Not Available	1358	Open in IMG/M
3300022715\|Ga0242678_1028357	Not Available	724	Open in IMG/M
3300022716\|Ga0242673_1000557	All Organisms → cellular organisms → Bacteria	2934	Open in IMG/M
3300022716\|Ga0242673_1024039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300022717\|Ga0242661_1022894	Not Available	1022	Open in IMG/M
3300022717\|Ga0242661_1056384	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300022717\|Ga0242661_1070880	Not Available	686	Open in IMG/M
3300022717\|Ga0242661_1152872	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300022717\|Ga0242661_1169444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300022722\|Ga0242657_1005590	Not Available	1907	Open in IMG/M
3300022722\|Ga0242657_1169199	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300022722\|Ga0242657_1203060	Not Available	549	Open in IMG/M
3300022724\|Ga0242665_10050052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1108	Open in IMG/M
3300022726\|Ga0242654_10018219	Not Available	1680	Open in IMG/M
3300023660\|Ga0247550_102483	Not Available	631	Open in IMG/M
3300023672\|Ga0247553_101953	Not Available	921	Open in IMG/M
3300026330\|Ga0209473_1114818	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300027094\|Ga0208094_104567	Not Available	662	Open in IMG/M
3300027548\|Ga0209523_1034292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300027879\|Ga0209169_10038516	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300028906\|Ga0308309_10099053	All Organisms → cellular organisms → Bacteria → Acidobacteria	2250	Open in IMG/M
3300029636\|Ga0222749_10006436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4791	Open in IMG/M
3300029701\|Ga0222748_1119904	Not Available	530	Open in IMG/M
3300030659\|Ga0316363_10063563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1715	Open in IMG/M
3300030707\|Ga0310038_10004535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9854	Open in IMG/M
3300030813\|Ga0265750_1056889	Not Available	605	Open in IMG/M
3300030836\|Ga0265767_113316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	576	Open in IMG/M
3300030873\|Ga0265751_104669	Not Available	774	Open in IMG/M
3300030888\|Ga0265769_101333	Not Available	1163	Open in IMG/M
3300030888\|Ga0265769_118367	Not Available	541	Open in IMG/M
3300030942\|Ga0247549_103778	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	573	Open in IMG/M
3300031017\|Ga0265744_113500	Not Available	533	Open in IMG/M
3300031817\|Ga0316046_104824	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031817\|Ga0316046_107635	Not Available	620	Open in IMG/M
3300032051\|Ga0318532_10319376	Not Available	551	Open in IMG/M
3300032072\|Ga0326631_111333	Not Available	596	Open in IMG/M
3300032120\|Ga0316053_114312	Not Available	583	Open in IMG/M
3300032160\|Ga0311301_10249041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2934	Open in IMG/M
3300032160\|Ga0311301_10688017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1442	Open in IMG/M
3300032205\|Ga0307472_100337101	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300032515\|Ga0348332_12782862	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Marasmiaceae → Marasmius → Marasmius oreades	1122	Open in IMG/M
3300032515\|Ga0348332_13081431	Not Available	932	Open in IMG/M
3300032892\|Ga0335081_10437006	Not Available	1669	Open in IMG/M
3300032892\|Ga0335081_10719505	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.03%
Host-Associated	Host-Associated	1.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.16%
Aquatic	Environmental → Aquatic	9.87%
Plants	Host-Associated → Plants	1.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.84%
Freshwater	Environmental → Aquatic → Freshwater	7.24%
Sediment	Environmental → Aquatic → Sediment	1.97%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.32%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.37%
Loam	Environmental → Terrestrial → Soil → Loam	9.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.32%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.32%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.32%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019161	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019163	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023660	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023672	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027094	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF022 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030942	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031817	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045980

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10005297	3300001082	Forest Soil	LRTAITDPRLGSGLTANRKNLLNASGLYPAFDMMFLFTSTSALL*
JGI12636J13339_10004073	3300001154	Forest Soil	LGSGLTANRINQFNASELYPAFGMMFLFASTSALL*
JGIcombinedJ26739_1004123971	3300002245	Forest Soil	AACDLRSGSGLTANRKNLPNASELYPAFDIFLFSSTSALL*
JGIcombinedJ26739_1014974342	3300002245	Forest Soil	LRTAITDPRLGSGLTANRINLVNASGLYPAFDMMFGFASTSALL*
Ga0062389_1027088251	3300004092	Bog Forest Soil	LRMATRDLCSGSGLTANRINLFNASGLYLAFDIVFSFASTSTLL*
Ga0068966_10950011	3300004476	Peatlands Soil	SLAGATSDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL*
Ga0066687_108838292	3300005454	Soil	TRDPCSGSGLTANRINLLNASGLYPAFDMMFLFASTSTWL*
Ga0070741_101070071	3300005529	Surface Soil	TRDQGSGSGLTANRTNQRNASGLYLAFDGPFLFSSTSALL*
Ga0070735_100389504	3300005534	Surface Soil	LRTAVTDPCLGSGLTANRINLLNASGLYPAFDMVFLFASTSALL*
Ga0070732_100250061	3300005542	Surface Soil	LRTAVTDPCLGSGLTANRINLLNASGLYPAFDMMFWFASTSALL*
Ga0066661_107848012	3300005554	Soil	DLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0066670_102134881	3300005560	Soil	TSPLSLAGATSDLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0070764_1000015613	3300005712	Soil	MRCCDCCSGSGLTANRINQFNASGLYLAFDVMFLFASTSTWL*
Ga0066903_1000096502	3300005764	Tropical Forest Soil	LGSGLTANRKNLFNASGPYLAFDIVLLFASTSTLL*
Ga0066903_1024755553	3300005764	Tropical Forest Soil	LGSGLTANRINQFNASGLYLALDVSPLFSSASALL*
Ga0070766_102452893	3300005921	Soil	MVAILADATTDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL*
Ga0075028_1000324822	3300006050	Watersheds	LAASLAGATSDPCLGSGLTANRINQFNASGLYPAFGMMFLFASTSALL*
Ga0075028_1008348431	3300006050	Watersheds	SLAGATSDPCLGSGLTANRINQFNASGLYLAFDMMFMFASTSALL*
Ga0075018_103498372	3300006172	Watersheds	DLAASLAGATSDPCLGSGLTANRINQFNASGLYLAFDMMFLFASTSALL*
Ga0070716_1009308161	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GSGLTANRINQSNASGLYLAFDRSLLFSSASALL*
Ga0070765_1000080031	3300006176	Soil	RTATTDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTGALL*
Ga0070765_1015724761	3300006176	Soil	ASLAGATSDPCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL*
Ga0075433_100020355	3300006852	Populus Rhizosphere	MLPYGCATRDLCLGSGLTANRKNSFNASGLYLAFDMMFLFASTSALL*
Ga0075426_100749281	3300006903	Populus Rhizosphere	FRSGSGLTANRVNLCNASGLIAFQQVFLFASTSALL*
Ga0102924_11629742	3300007982	Iron-Sulfur Acid Spring	SLRTAITDPCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL*
Ga0099829_108351832	3300009038	Vadose Zone Soil	CLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0099827_105368871	3300009090	Vadose Zone Soil	GSGLTANRINQLNASGLYPAFDGFFLFASTSILL*
Ga0116221_12201902	3300009523	Peatlands Soil	AGATSDLCLGSGLTANRINLLNASGLYPAFDMMFLFASTSALL*
Ga0116225_10310121	3300009524	Peatlands Soil	CLGSGLTANRINQFNASGLYPAFDVMFLFASTSALL*
Ga0116216_100267683	3300009698	Peatlands Soil	CLGSGLTANRINQFNASGLYPAFDMMFSFASTSALL*
Ga0116219_1000026841	3300009824	Peatlands Soil	ATSDPCLGSGLTANRINQFNASGLYPAFDVMFLFASTSALL*
Ga0116219_101096413	3300009824	Peatlands Soil	MLRCCDCCSGSGLTANRINQFNASGLYLAFDVMFLFASTSA
Ga0116219_105596142	3300009824	Peatlands Soil	CLGSGLTANRINLLNASGLYPAFDMMFLFASTSALL*
Ga0116223_100294523	3300009839	Peatlands Soil	MLRCCDCCSGSGLTANRINQFNASGLYLAFDMMFLFASTSAWL*
Ga0127430_1349091	3300010076	Grasslands Soil	ATSDLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0127482_11108971	3300010126	Grasslands Soil	TSDLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSALL*
Ga0134065_105134011	3300010326	Grasslands Soil	TRDLCLGSGLTANRKNSVNASGLYLAFDMMFLFASTSA*
Ga0136449_1000509171	3300010379	Peatlands Soil	MLRCCDCCSGSGLTANRINQFNASGLYLAFDVMFLFASTSAWL
Ga0136449_1001236261	3300010379	Peatlands Soil	MLRCCDFCSGSGLTANRINQFNASGLYLAFDMMFLFASTSAWL*
Ga0136449_1001480424	3300010379	Peatlands Soil	LGSGLTANRKNLLNASGLYPAFDMMFWFASTSALL*
Ga0136449_1015826913	3300010379	Peatlands Soil	RCCDCCSGSGLTANRINQFNASGLYLAFDVMFLFASTSAWL*
Ga0136449_1030826361	3300010379	Peatlands Soil	RDRGSGSGLTANRINQLNASGLYLAFNSSPLFISTSALL*
Ga0137364_114209621	3300012198	Vadose Zone Soil	GATSDLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0137382_107355451	3300012200	Vadose Zone Soil	TLADLTSPLSLAGATSDLCLGSGLTANRINQFNASGLYPASDIVFLFASTSAWL*
Ga0137379_101197771	3300012209	Vadose Zone Soil	LRVAARDPCSGSGLTANRINQFNASGLYPAFDIVFLF
Ga0150985_1224185992	3300012212	Avena Fatua Rhizosphere	MPVTANWKNQSNASGLYLAFDMMFSFASTSALLFR
Ga0134034_12095362	3300012375	Grasslands Soil	NSTRDLCLGSGLTANRKNSVNASGLYLAFDMMFLFASTSA*
Ga0134060_13599621	3300012410	Grasslands Soil	MTVWSNSGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0137359_109180412	3300012923	Vadose Zone Soil	PLSLAGATSDLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL*
Ga0181522_100594653	3300014657	Bog	RLGSGLTANRKNQFDASGLYPAFDLVFWFTSTSALL*
Ga0181522_105294331	3300014657	Bog	SLRTAITDPCLGSGLTANRKNLLNASGLYPAFDMMFLFASTSALL*
Ga0181507_13860432	3300016705	Peatland	PCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL
Ga0187824_103466501	3300017927	Freshwater Sediment	SGSGLTANRTNQCNASGLYLAFDGPFLFSSTSAWL
Ga0187847_105425302	3300017948	Peatland	LGSGLTANRKNLLNASGLYPAFDMMFLFASTSALL
Ga0187817_101973602	3300017955	Freshwater Sediment	RTAITDPCLGSGLTANRINQFNASGLYPDFDMMFLFASTSALL
Ga0187779_111524471	3300017959	Tropical Peatland	LCPCEAALRDLCLGSGLTANRINLPHASELYLAFNRSSLFSSTSALL
Ga0187776_109735922	3300017966	Tropical Peatland	DLCSGSGLTANRINQFNASGLYPAFDMMFLFASTSTLL
Ga0187816_100749173	3300017995	Freshwater Sediment	DLCLGSGLTANRINQLNASGLYPAFDMMFLFASTSALL
Ga0187805_102774202	3300018007	Freshwater Sediment	LLSLRTAITDPCLGSGLTANRINQFNASGLYPAFDMMFWFASTSALL
Ga0187884_102516791	3300018009	Peatland	DPCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL
Ga0187772_107463752	3300018085	Tropical Peatland	DCHSGSGLTANRINQFNASGLYLAFDMVFLFASTSAWL
Ga0187771_101085032	3300018088	Tropical Peatland	IVCSGSGLTANRINQFNASGLYPAFDMMFLFASTSAWL
Ga0184602_1175091	3300019161	Soil	DPCLGSGLTANRINLLNASGLYPAFDMMFLFASTSALL
Ga0184581_1062212	3300019163	Soil	AITDPCLGSGLTANRINQFNASGLYPAFGMVFLFASTSALL
Ga0181514_15094341	3300019268	Peatland	MAATEVTTESCDLRLGSGLTANRKNQFDASGLYPAFDLVFWFTSTSALL
Ga0182025_13577653	3300019786	Permafrost	LLSLRTAITDPRLGSGLTANRINQFNASGLYPAFDMMFGFASTSALL
Ga0210403_107417731	3300020580	Soil	TDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0210403_108929161	3300020580	Soil	DLAASLAGATSDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0210399_100294271	3300020581	Soil	SLAGATSDPCLGSGLTANRINQFNASGLYPAFDMVFLFASTSALL
Ga0210395_111860061	3300020582	Soil	ITDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0210404_101834892	3300021088	Soil	ARSRLGSGLTANRINQSNASGLYLAFDRSFLFSSTSALL
Ga0210400_104461291	3300021170	Soil	DLCLGSGLTANRKNLFNASGLYLAFDMMFVFASTSALL
Ga0210400_112368902	3300021170	Soil	ITDPRLGSGLTANRINLVNASGLYPAFDMMFGFASTSALL
Ga0210396_100830784	3300021180	Soil	LRTAITDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0210387_108927971	3300021405	Soil	CGVRRCDCCSGSGLTANRINQFNASGLYLAFDRMFTFASTSTWL
Ga0210387_117059802	3300021405	Soil	LGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0210383_103064661	3300021407	Soil	SLRTAITDPCLGSGLTANRKNLLNASGLYPAFDMMFLFASTSALL
Ga0210410_100102751	3300021479	Soil	GATSDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0210409_102935312	3300021559	Soil	GRWSDLCLGSGLTANRKNLFNASGLYLAFDMMFVFASTSALL
Ga0210409_104999282	3300021559	Soil	LGSGLTANRKNLFNASGLYLAFDMMFVFASTSALL
Ga0242646_10398661	3300022502	Soil	PCLGSGLTANRINQFNASGLYPAFDVMFLFASTSALL
Ga0242650_10161282	3300022503	Soil	GSGSGLTANRINQFNASGLYLAFVRSFLFSSTSALL
Ga0242650_10261441	3300022503	Soil	CLGSGLTANRINQFNASGLYPAFDMMFLFASTSTLL
Ga0242642_10190651	3300022504	Soil	LRSGSGLTANRINQFNASGLYLAFVRSFLFSSTSALL
Ga0242642_10547361	3300022504	Soil	APGDRHSGSGLTANRINQFNASGLYLALDMVFLFASTSAQL
Ga0242642_10625881	3300022504	Soil	CLGSGLTANRKNLFNASGLYLAFDMMFVFASTSALL
Ga0242647_10124151	3300022505	Soil	MFSLNTRRDLCLGSGLTANRINLPYASELYPAFNISSSFSSTSAL
Ga0222728_11012142	3300022508	Soil	LGSGLTANRINQFNASGLYPAFDVMFLFASTSALL
Ga0242649_10219383	3300022509	Soil	RTAITDPCLGSGLTANRINLLNASGLYPAFGMMFSFASTSALL
Ga0242652_10175341	3300022510	Soil	RHSGSGLTANRKNLFNASGLYLASDMVFMFASTSA
Ga0242667_10590301	3300022513	Soil	GRSCSGSGLTANRINQSNASGLYLAFDMMFLFASTSAQL
Ga0242659_10731451	3300022522	Soil	LAASLAGATSDPCLGSGLTANRKNLLNASGLYPAFDMMFLFASTSALL
Ga0242663_10483532	3300022523	Soil	AGRWSDLCLGYGLTANRKNLFNASGLYLAFDMMFVFASTSALL
Ga0242663_10733111	3300022523	Soil	CLGSGLTANRINLLNASGLYPAFDMVFLFASTSALL
Ga0242656_10612531	3300022525	Soil	DPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSTLL
Ga0242656_10906192	3300022525	Soil	SDLCLGSGLTANRKNLFNAPGLYLASDMMFVFASTSALL
Ga0242664_10103061	3300022527	Soil	GPCLGSGLTANRINQFNASGLYPAFDMMFLFASPSALL
Ga0242664_10526502	3300022527	Soil	ATTDPCLGSGLTANRINQFNASGLYPAFDIIFSFASTSTLL
Ga0242664_10556161	3300022527	Soil	DLAASLAGATSDPCLGSGLTANRINQFNASGLYPAFDMVFLFASTSALL
Ga0242669_10668721	3300022528	Soil	LRIAFSHPYARLGSGLTANRKNLLNASGLYPAFDMMFLFASTSA
Ga0242669_11223281	3300022528	Soil	LLSLRTAITDPCLGSGLTANRINQFNASGLYPAFDVMFWFASTSALL
Ga0242668_10957661	3300022529	Soil	CRPDLAASLAGRWSDLCLGSGLTANRKNLFNASGLYLAFDRMFVFASTSALL
Ga0242658_11744531	3300022530	Soil	LSLRTAITDPCLGSGLTANRINQFNASGLYPAFDMVFLFASTSALL
Ga0242658_12124642	3300022530	Soil	LRVATRDLDLGSGLTANRINQFNASGLYLAFVRSFLFFSTSA
Ga0242660_11924721	3300022531	Soil	AGCNARSGLGSGLTANRINQSNASGLYLAFDRSLLFSSASALL
Ga0242655_101532132	3300022532	Soil	TDPCLGSGLTANRINQFNASGLYPAFDMVFLFASTSTLL
Ga0242655_103040461	3300022532	Soil	MLLVAACLGSGLTANRINQFNASGLYPAFDMVFLFASTS
Ga0242662_101517902	3300022533	Soil	DLDLGSGLTANRINQFNASGLYLAFVRSFLFSSTSA
Ga0242678_10037841	3300022715	Soil	CLGSGLTANRINQFNASLLYPAFDWMFLFASTSTLL
Ga0242678_10283572	3300022715	Soil	CLGSGLTANRKNQFNASGLYPAFDIMFLFASTSALL
Ga0242673_10005571	3300022716	Soil	RSCSGSGLTANRINQSNASGLYLAFDMMFLFASTSAQL
Ga0242673_10240392	3300022716	Soil	LGSGLTANRKNQFNASGLYPAFDIMFLFASTSALL
Ga0242661_10228942	3300022717	Soil	LGSGLTANRINLVNASGLYPAFDMMFGFASTSALL
Ga0242661_10563843	3300022717	Soil	WSDLCLGSGLTANRKNLFNASGLYPAFDMMFGFASTSALL
Ga0242661_10708802	3300022717	Soil	SLRTAITDPCLGSGLTANRINQFNASGLYPAFDMVFLFASPSALL
Ga0242661_11528721	3300022717	Soil	RSRLGSGLTANRINQFNASGLYLAFVRSFLFSSTSTLL
Ga0242661_11694442	3300022717	Soil	SRLGSGLTANRINQFNASGLYLAFVRSFLFSSTSTLL
Ga0242657_10055901	3300022722	Soil	LAGCWSDLCLGSGLTANRINLFNASGLYLASDVMFWFASTSALL
Ga0242657_11691991	3300022722	Soil	LGSGLTANRINQFNASGLYPAFDMMFGFASTSALL
Ga0242657_12030601	3300022722	Soil	MLQRAITDPCLGSGLTANRINQFNASGLYPAFDMMFGFASTS
Ga0242665_100500523	3300022724	Soil	RLTSRDRGSGSGLTANRINQLNASGLYLAFNISSLFISTSALL
Ga0242654_100182193	3300022726	Soil	SDPCLGSELTANRINQPNASGLYPAFDMMFLFASTSALL
Ga0247550_1024831	3300023660	Soil	AITDPCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL
Ga0247553_1019531	3300023672	Soil	GPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0209473_11148181	3300026330	Soil	DLTSPLSLAGATSDLCLGSGLTANRINQFNASGLYPAFDIVFLFASTSAWL
Ga0208094_1045672	3300027094	Forest Soil	PCLGSGLTANRINLFNASGLYPAFDMMFLFASTSALL
Ga0209523_10342923	3300027548	Forest Soil	LGSGLTANRINQSNASGLYLAFDRSFLFSSTSALL
Ga0209169_100385163	3300027879	Soil	RCCDCCSGSGLTANRINQFNASGLYLAFDVMFLFASTSTWL
Ga0308309_100990533	3300028906	Soil	SDPCLGSGLTANRKNLLNASGLYPAFDMMFLFASTSALL
Ga0222749_100064365	3300029636	Soil	PCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0222748_11199041	3300029701	Soil	RSCSGSGLTANRINQFNASGLYLAFDMMFLFASTSAQL
Ga0316363_100635631	3300030659	Peatlands Soil	DPCLGSGLTANRINQFNASGLYPAFDVMFLFASTSALL
Ga0310038_100045358	3300030707	Peatlands Soil	RVSCDCRSGSGLTANRINQFNASGLYPAFDVMFLFASTSA
Ga0265750_10568891	3300030813	Soil	GPRLGSGLTANRKNLFNASGLYPAFDMMFGFASTSALL
Ga0265767_1133162	3300030836	Soil	LLSLRTAITDPCLGSGLTANRKNLLNASGLYPAFDMMFLFASTSALL
Ga0265751_1046692	3300030873	Soil	DRHSGSGLTANRKNLFNASGLYLASDMVFLFASTSALL
Ga0265769_1013331	3300030888	Soil	SGSALTANRINHFNASGLYLAIDVMFTFASTSAWL
Ga0265769_1183671	3300030888	Soil	LRTAITDPCLGSGLTANRINQFNASGLYPAFDVMFLFASTSTLL
Ga0247549_1037781	3300030942	Soil	SLGSGLTANRKNQINASGIYPAFDVKFLFSSTSALL
Ga0265744_1135002	3300031017	Soil	LRTAITDPCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSTLL
Ga0316046_1048241	3300031817	Soil	TDPCLGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL
Ga0316046_1076351	3300031817	Soil	ADPCLGSGLTANRKNLLNASGLYPASDVMFLFASTSALL
Ga0318532_103193761	3300032051	Soil	LRVATRDLGLGSGLTANRINQFNASGLYLAFVRSFLFSSTS
Ga0326631_1113331	3300032072	Soil	CLGSGLTANRINQFNASGLYPAFDMMFEFASTSALL
Ga0316053_1143121	3300032120	Soil	TDPCLGSGLTANRINQFNASGLYPAFDMVFLFASTSALL
Ga0311301_102490411	3300032160	Peatlands Soil	LAGATSDPCLGSGLTANRINQFNASGLYPAFDMMFLFASTSALL
Ga0311301_106880171	3300032160	Peatlands Soil	SFALRRAMLRCCDCCSGSGLTANRINQFNASGLYLAFDVMFLFASTSAWL
Ga0307472_1003371011	3300032205	Hardwood Forest Soil	SLPLRGGTSDLCLGSGLTANRINLFNASGLYPAFDMMFLFASTSA
Ga0348332_127828622	3300032515	Plant Litter	LGSGLTANRKNLLNASGLYPAFDVMFLFASTSALL
Ga0348332_130814311	3300032515	Plant Litter	DPCLGSGLTANRINQFNASGLYPAFDMVFLFASTSALL
Ga0335081_104370061	3300032892	Soil	DQCLGSGLTANRINQFNASGLYLAFDMMFLFASTSA
Ga0335081_107195051	3300032892	Soil	RVSCDCHSGSGLTANRINQFNASGLYPAFDMMLSFASTSAWL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign