Metagenome / Metatranscriptome Family F045948

Basic Information
Family ID	F045948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	43 residues
Representative Sequence	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARI
Number of Associated Samples	114
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.92 %
% of genes near scaffold ends (potentially truncated)	96.71 %
% of genes from short scaffolds (< 2000 bps)	90.79 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (63.816 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.290 % of family members)
Environment Ontology (ENVO)	Unclassified (46.053 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.658 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1ICChiseqgaiiDRAFT_07185203 2C688J18823_100969323 3JGI25615J43890_10804612 4Ga0066820_10014371 5Ga0066823_100662541 6Ga0066388_1023311852 7Ga0066388_1026346821 8Ga0066388_1054402441 9Ga0066388_1057126803 10Ga0066388_1079242123 11Ga0070692_100271031 12Ga0070713_1002846553 13Ga0070706_1004232031 14Ga0070699_1002126553 15Ga0070693_1002227311 16Ga0066905_1011503882 17Ga0066905_1016580022 18Ga0066905_1022953381 19Ga0066903_1046563941 20Ga0070716_1010872722 21Ga0070712_1002226231 22Ga0074053_120129723 23Ga0066659_112909313 24Ga0075431_1000583376 25Ga0075420_1014617853 26Ga0075425_1018999542 27Ga0075434_1020776331 28Ga0075424_1000829161 29Ga0075418_104022292 30Ga0075418_104599653 31Ga0126380_100810396 32Ga0126382_112066001 33Ga0126373_120324152 34Ga0126372_105721802 35Ga0126372_105731201 36Ga0126372_110008404 37Ga0126372_122503733 38Ga0126379_138088882 39Ga0126383_108627851 40Ga0126383_118435161 41Ga0124850_10049548 42Ga0124850_10320461 43Ga0137363_103649751 44Ga0137379_112396822 45Ga0137358_104370642 46Ga0137359_115602261 47Ga0126375_112297831 48Ga0126369_134224972 49Ga0134076_103269303 50Ga0164309_116428081 51Ga0181525_106335441 52Ga0182036_106569772 53Ga0182033_103815671 54Ga0182035_113746133 55Ga0182032_115563272 56Ga0182034_113199761 57Ga0182034_118236961 58Ga0182040_115142261 59Ga0182037_107938601 60Ga0182039_102818595 61Ga0182039_105690621 62Ga0182039_109204333 63Ga0184620_100055771 64Ga0184628_101585083 65Ga0193705_10140423 66Ga0193694_10113343 67Ga0213879_101109212 68Ga0210402_110572482 69Ga0126371_108993071 70Ga0126371_110526162 71Ga0126371_111693752 72Ga0126371_130074093 73Ga0126371_137126982 74Ga0126371_137766121 75Ga0179589_102886861 76Ga0207684_106969481 77Ga0209239_12153051 78Ga0209267_13161461 79Ga0208981_10074013 80Ga0307295_100292241 81Ga0307295_101682281 82Ga0307285_100049762 83Ga0307307_101358082 84Ga0307280_102886371 85Ga0307287_103757822 86Ga0307304_101765401 87Ga0307498_101016023 88Ga0170824_1231181531 89Ga0318534_101379503 90Ga0318541_103656552 91Ga0318538_102623563 92Ga0318571_101782823 93Ga0318571_104025271 94Ga0318542_103359641 95Ga0318574_104930813 96Ga0318496_101516094 97Ga0318500_102910623 98Ga0306918_101366863 99Ga0306918_114939531 100Ga0318492_103228232 101Ga0318537_100362611 102Ga0318554_102620024 103Ga0318521_104315811 104Ga0318546_107470732 105Ga0318543_100026971 106Ga0318566_104785241 107Ga0318529_102812861 108Ga0318529_103944892 109Ga0318503_100645113 110Ga0318503_101185343 111Ga0318576_101637311 112Ga0318523_103760551 113Ga0318517_101603751 114Ga0318512_101057755 115Ga0318512_103886151 116Ga0306919_101071335 117Ga0318544_103289411 118Ga0306925_111514523 119Ga0306925_115058641 120Ga0306923_101332855 121Ga0306923_102350801 122Ga0306923_102707771 123Ga0306923_117245101 124Ga0306921_107041161 125Ga0310916_103456161 126Ga0310913_101414161 127Ga0310913_107598741 128Ga0310909_100747741 129Ga0310909_103260541 130Ga0306926_115594611 131Ga0306926_120174191 132Ga0318530_101170391 133Ga0306922_106634323 134Ga0306922_112388573 135Ga0318559_102876343 136Ga0318556_100380614 137Ga0318556_101234933 138Ga0318532_100832871 139Ga0318506_102089022 140Ga0318533_113140041 141Ga0318505_103216313 142Ga0306924_106596803 143Ga0318577_100332155 144Ga0318540_103678582 145Ga0307470_106357381 146Ga0307470_113611412 147Ga0307471_1003280041 148Ga0307472_1008706511 149Ga0307472_1024882981 150Ga0306920_1023507301 151Ga0306920_1024950513 152Ga0318519_109249521
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1ICChiseqgaiiDRAFT_07185203 2C688J18823_100969323 3JGI25615J43890_10804612 4Ga0066388_1026346821 5Ga0066388_1054402441 6Ga0070692_100271031 7Ga0070716_1010872722 8Ga0066659_112909313 9Ga0075425_1018999542 10Ga0075424_1000829161 11Ga0075418_104599653 12Ga0126383_118435161 13Ga0124850_10049548 14Ga0137358_104370642 15Ga0181525_106335441 16Ga0182036_106569772 17Ga0179589_102886861 18Ga0318492_103228232 19Ga0318523_103760551 20Ga0306923_101332855 21Ga0306922_106634323 22Ga0306922_112388573 23Ga0307471_1003280041
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0318517_101603751 2Ga0066820_10014371 3Ga0066388_1023311852 4Ga0066388_1054402441 5Ga0070713_1002846553 6Ga0066903_1046563941 7Ga0070716_1010872722 8Ga0066659_112909313 9Ga0075431_1000583376 10Ga0075425_1018999542 11Ga0075424_1000829161 12Ga0126380_100810396 13Ga0126382_112066001 14Ga0137358_104370642 15Ga0137359_115602261 16Ga0181525_106335441 17Ga0182034_118236961 18Ga0182039_105690621 19Ga0193694_10113343 20Ga0210402_110572482 21Ga0126371_137126982 22Ga0179589_102886861 23Ga0307295_100292241 24Ga0307498_101016023 25Ga0318492_103228232 26Ga0318523_103760551 27Ga0306926_115594611 28Ga0306926_120174191 29Ga0306922_106634323 30Ga0306922_112388573 31Ga0307471_1003280041 32Ga0307472_1008706511
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.29% β-sheet: 0.00% Coil/Unstructured: 55.71%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF00300	His_Phos_1	9.21
PF12536	DUF3734	7.89
PF13618	Gluconate_2-dh3	5.92
PF03401	TctC	3.95
PF13490	zf-HC2	1.32
PF10518	TAT_signal	1.32
PF00248	Aldo_ket_red	1.32
PF00725	3HCDH	1.32
PF05199	GMC_oxred_C	1.32
PF00375	SDF	1.32

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.95
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.97
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.97
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.32
COG4828	Uncharacterized membrane protein	Function unknown [S]	1.32
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.66
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.66
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.66
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.66
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.66

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.82 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.82 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.82 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.29 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.13 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.61 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.32 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.18 %
Unclassified	root	N/A	36.18 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	18.42 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.32 %

Name	Rank	Taxonomy	Distribution
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	2.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.32 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.32 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.42 %
Bordetella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella	2.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.32 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.66 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	1.32 %
Unclassified	root	N/A	36.18 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.42 %
Bordetella hinzii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella hinzii	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.32 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.32 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Paraburkholderia xenovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans	0.66 %
Unclassified	root	N/A	36.18 %
unclassified Polynucleobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter	1.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.42 %
Bordetella hinzii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella hinzii	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.32 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.32 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Paraburkholderia xenovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans	0.66 %
Polynucleobacter sp. Latsch14-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. Latsch14-2	1.32 %
Unclassified	root	N/A	36.18 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0718520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300001686\|C688J18823_10096932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans	2048	Open in IMG/M
3300002910\|JGI25615J43890_1080461	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005160\|Ga0066820_1001437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. Latsch14-2	1048	Open in IMG/M
3300005163\|Ga0066823_10066254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300005332\|Ga0066388_102331185	Not Available	969	Open in IMG/M
3300005332\|Ga0066388_102634682	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005332\|Ga0066388_105440244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300005332\|Ga0066388_105712680	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300005332\|Ga0066388_107924212	Not Available	531	Open in IMG/M

Showing 1 to 10 of 152 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.39%
Host-Associated	Host-Associated	4.61%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.97%
Plants	Host-Associated → Plants	4.61%
Terrestrial	Environmental → Terrestrial	93.42%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.61%
Sediment	Environmental → Aquatic → Sediment	1.32%
Soil	Environmental → Terrestrial → Soil	93.42%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	13.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.66%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.29%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.66%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.29%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 114 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07185203	3300000033	Soil	MIMLLAVTLYATAGTVIAAAFLAFGVTRVLPVPAAV
C688J18823_100969323	3300001686	Soil	MIVLIALGVYVAAGVAVAAAFVVFGVTRVLPEHLR*
JGI25615J43890_10804612	3300002910	Grasslands Soil	MIVLLALVLYAAAGXAIAAAFLVFGVTRVLPEPAPVTLGARIVLFP
Ga0066820_10014371	3300005160	Soil	MIVLIALGVYVAVGVAVAAAFVVFGVTRVLPEHLPVTVSA
Ga0066823_100662541	3300005163	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFPGA
Ga0066388_1023311852	3300005332	Tropical Forest Soil	VTVLLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIVLFP
Ga0066388_1026346821	3300005332	Tropical Forest Soil	VIVPLLALALYAATGFAVAIAFLAFGVTRVLPEPAPVTLGARIMLFPGTAALWPCVLIRWLRSSR*
Ga0066388_1054402441	3300005332	Tropical Forest Soil	VIVPLLALALYAVVGFAVAVTFLAFGVTRVLPEPAPVTLGARIML
Ga0066388_1057126803	3300005332	Tropical Forest Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIM
Ga0066388_1079242123	3300005332	Tropical Forest Soil	VIVPRLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIM
Ga0070692_100271031	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLIALGVYVAAGVAVAAAFVAFGVTRVLPEYLPVTVGARILLF
Ga0070713_1002846553	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIILLALALYAATGIAIAIAFLVFGVTRVLATPVPVTLGARIMLFP
Ga0070706_1004232031	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLLALVFYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFPGA
Ga0070699_1002126553	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLLALVLYAAAGIVIAAAFLVFGVTRVLPEPAPVTLGA
Ga0070693_1002227311	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLIALGVYVAAGVTVAAAFVAFGVTRVLPEHLPVTVGA
Ga0066905_1011503882	3300005713	Tropical Forest Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFPGTAALW
Ga0066905_1016580022	3300005713	Tropical Forest Soil	VIVLLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARI
Ga0066905_1022953381	3300005713	Tropical Forest Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIML
Ga0066903_1046563941	3300005764	Tropical Forest Soil	MIVLIALALYAAVGVAIAAGFLVFGVTRVLPEPVPMTLGARIMLFPG
Ga0070716_1010872722	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLPALAVYAAAGAIIAAAFLVFGVSRVLPAPAPVTLGARVLLFPGALAL
Ga0070712_1002226231	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLIALGVYVAVGVAVAAAFVVFGVTRVLPEYLPVTVSARILLFPGAAVL
Ga0074053_120129723	3300006575	Soil	MIVLIALGVYVAAGVAVAAAFVAFGVTRVLPEYLP
Ga0066659_112909313	3300006797	Soil	MIVLLALALYAATGVAIAAAFLVFGVTRVPPKPAP
Ga0075431_1000583376	3300006847	Populus Rhizosphere	MIVLIGLALYVAAGIAVAAAFVAFGVTRVLPEPVPVSVGARILIFP
Ga0075420_1014617853	3300006853	Populus Rhizosphere	MIVLLALVLYAAAGITIAAAFLVFGVTRVLPEPARVTLGARIVLFPGAAALW
Ga0075425_1018999542	3300006854	Populus Rhizosphere	MTLLIGVAFYAAAGVAVGAAFVAFGITRVLPEPAP
Ga0075434_1020776331	3300006871	Populus Rhizosphere	MIVLVALALYAAMGVAIAAAFLVFGVTRVLPEPVPVTLGARIMLF
Ga0075424_1000829161	3300006904	Populus Rhizosphere	MIVVWGLALYGLAGAVIALAFVVHGVTRVLPEQVSM
Ga0075418_104022292	3300009100	Populus Rhizosphere	MIVLLALALYAVTGIAIAAAFLVFGVTRVLPKPVPVTLGARIMLFPGA
Ga0075418_104599653	3300009100	Populus Rhizosphere	MIVLIGLALYVAAGIAVAAAFVAFGVTRVLPEPVPVS
Ga0126380_100810396	3300010043	Tropical Forest Soil	MIVLLAVAVYAAVGVVIAAAFLAFGVTRVLPEPTAVTLGARIMLF
Ga0126382_112066001	3300010047	Tropical Forest Soil	MIVLIGLALYAAAGIAVAAAVVAFGVTLVLPEPVPVSVI
Ga0126373_120324152	3300010048	Tropical Forest Soil	VTVPLLALALYAAAGFAVAIAFLAFGVPRVLPEPAPVTLGARILLFPGTAALWPCVLI
Ga0126372_105721802	3300010360	Tropical Forest Soil	MIVLLAVALYAVAGIVIAAAFLAFGVTRVLPAPAAVTLGARIMLF
Ga0126372_105731201	3300010360	Tropical Forest Soil	VTVLLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGA
Ga0126372_110008404	3300010360	Tropical Forest Soil	VIGPLLALALYAAAGVAVAVAFLVFGVTRVLPEPAPVTLGARI
Ga0126372_122503733	3300010360	Tropical Forest Soil	MIVLLTLVLYAAAGIAIAAAFLVFGVTRVLPEPAP
Ga0126379_138088882	3300010366	Tropical Forest Soil	VTVPLLALALYAAAGFAVAVAFLAFGVTRVLPEPAPVTLGARIMLFPGTAA
Ga0126383_108627851	3300010398	Tropical Forest Soil	VIVLLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFPGTA
Ga0126383_118435161	3300010398	Tropical Forest Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPV
Ga0124850_10049548	3300010863	Tropical Forest Soil	MIVLLAVALYTVAGIVIAAAFLAFGVTRVLPAPATVTLGAR
Ga0124850_10320461	3300010863	Tropical Forest Soil	MIVLLALALYAAAGVAIAAAFVVFGVTRVLPEPAPVTLGARILLLFPGAAALWP
Ga0137363_103649751	3300012202	Vadose Zone Soil	MIMLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFPGA
Ga0137379_112396822	3300012209	Vadose Zone Soil	MIVLLAVTLYAAAGIVIAAAFLAFGVTRVLPAPAAVTLG
Ga0137358_104370642	3300012582	Vadose Zone Soil	ALYAATGIAIATAFLVFGVTSVLPEPVPVTLGARIMLFPGAAAHWPYMLIRWLKSSQ*
Ga0137359_115602261	3300012923	Vadose Zone Soil	MIVLLALALYAATGFAVAVAFLAFGVTRVLPEPAPVTLGARIMLFPGTAA
Ga0126375_112297831	3300012948	Tropical Forest Soil	MIVLIGLALYAAAGIAVAAAFVAFGVTRVLPEPVPVSAGARI
Ga0126369_134224972	3300012971	Tropical Forest Soil	VIVPLLALALYAAAGFAIAAAFLVFGVTRVLPEPAPVTLGARIMLFPG
Ga0134076_103269303	3300012976	Grasslands Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFPGAVAL
Ga0164309_116428081	3300012984	Soil	MIVLLAVVLYAAAGIAIAAAFLVFGVTRVLPEPAPLTLGARIVLF
Ga0181525_106335441	3300014654	Bog	MILLDALALYAAAGLITAIAFASFGVTRVLPESASVTMGARIL
Ga0182036_106569772	3300016270	Soil	MLLAVELYAVAGVVIAVAFLAFGVARVLPTPVPVTLGARIMLF
Ga0182033_103815671	3300016319	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFP
Ga0182035_113746133	3300016341	Soil	MIVLLALALYAAAGIAVAAAFLVFGVTRVLPEPAPVTLGARIVLFPG
Ga0182032_115563272	3300016357	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGA
Ga0182034_113199761	3300016371	Soil	VIVLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIM
Ga0182034_118236961	3300016371	Soil	MIVLLAVTLYAAAGIVIAAAFVAFGVTRVLPAPATVTLGARIL
Ga0182040_115142261	3300016387	Soil	MIVLLALVLYAAAGVAIAAAFLVFGVTRVLPEPAPVTLGARIVLFP
Ga0182037_107938601	3300016404	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVTLGARI
Ga0182039_102818595	3300016422	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFPG
Ga0182039_105690621	3300016422	Soil	VIVSLLALALYAAAGFAVAVAFLALGVTRVLPEPAPVTLGA
Ga0182039_109204333	3300016422	Soil	MIVLLALALYAAAGIAIAAAFLAFGVTRVLPEPAPVTLGARIVLFPGAAA
Ga0184620_100055771	3300018051	Groundwater Sediment	MMIVLIGLALYAAAGVAIAAAFVVFGVTRVLPEPLP
Ga0184628_101585083	3300018083	Groundwater Sediment	MIVLIALGVYVAAGVAVAAAFVAFGVTRVLPEYLPV
Ga0193705_10140423	3300019869	Soil	MMIVLIGLALYAAAGVAIAAAFVVFGVTRVLPEPLPV
Ga0193694_10113343	3300021415	Soil	MMIVLIGLALYAAAGVAIAAAFVVFGVTRVLPEPLPVTVGARI
Ga0213879_101109212	3300021439	Bulk Soil	VIVPLLALALYAAAGFAVAVAFLALGVTRVLPEPAPV
Ga0210402_110572482	3300021478	Soil	MIVLICLALYAATGVAIGVAFVLFGVTRVLPEPAP
Ga0126371_108993071	3300021560	Tropical Forest Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGAR
Ga0126371_110526162	3300021560	Tropical Forest Soil	MIVLLALVLYAVAGIATAAAFLVFGVTRVLPEPAPVTLGARIMLFPGA
Ga0126371_111693752	3300021560	Tropical Forest Soil	MTVLLLALALYAAAGFAVAVAFLVFGVTRVLPEPA
Ga0126371_130074093	3300021560	Tropical Forest Soil	VIVPLLALALYAAAGFAVAIAFLAFGVTRVLPEPAPVTLGARIMLFPGTAALW
Ga0126371_137126982	3300021560	Tropical Forest Soil	VIVPLFALALYAATGFAVAIAFLAFGVTRVLPEPAPVTLGARIMLFPGTAALW
Ga0126371_137766121	3300021560	Tropical Forest Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVT
Ga0179589_102886861	3300024288	Vadose Zone Soil	MIVLLALALYAATGIAIAIAFLVFGVTRVLAKPVPVTLARG
Ga0207684_106969481	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFPGAVA
Ga0209239_12153051	3300026310	Grasslands Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTL
Ga0209267_13161461	3300026331	Soil	MIVLLALALYAATGVAIAAAFLVFGVTRVLPKPAPVTLGA
Ga0208981_10074013	3300027669	Forest Soil	MIVLIGLALYVAAGVAVATAFVVFGVTRVLPEPLPVT
Ga0307295_100292241	3300028708	Soil	MIVLIALGVYVAAGVAVAAAFVAFGVTRVLPEYLPVTVGARILLFLP
Ga0307295_101682281	3300028708	Soil	MIVLLAIALYAAAGIAIAAAFLAFGVTRVLPEPVPV
Ga0307285_100049762	3300028712	Soil	MIVLIALGVYVAAGVAVAAAFVVFGVTRVLPEHLR
Ga0307307_101358082	3300028718	Soil	MIVLLAIALYAAAGIAIAAAFLAFGVTRVLPEPVPVTLGTRIVLFP
Ga0307280_102886371	3300028768	Soil	MIVLLAIALYAAAGIAIAAAFLAFGVTRVLPEPVPVT
Ga0307287_103757822	3300028796	Soil	MMIVLIGLALYAAAGVAIAAAFVVFGVTRVLPEPLR
Ga0307304_101765401	3300028885	Soil	MIVLLAIALYAAAGIAIAAAFLAFGVTRVLPEPVPVTLGTRIVLFPGAVAL
Ga0307498_101016023	3300031170	Soil	MIMLLAVTLYATAGTVIAAAFLAFGVTRVLPAPAAVTLGARIMLFP
Ga0170824_1231181531	3300031231	Forest Soil	MMIVLIGLALYAAAGVAIAAAFVVFGVTRVLPDPLP
Ga0318534_101379503	3300031544	Soil	MIMLLAVTLYATAGTVIAAAFLAFGVTRVLPAPAAVTL
Ga0318541_103656552	3300031545	Soil	MIVLLAVTLYAAAGIVIAAAFVAFGVTRVLPAPATVTLGAR
Ga0318538_102623563	3300031546	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIMLFPGA
Ga0318571_101782823	3300031549	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVT
Ga0318571_104025271	3300031549	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIVLFPGTAALWP
Ga0318542_103359641	3300031668	Soil	VIVPLLALALYAAAGFVVAVAFLVFGVTRVLPEPAPVTLGARIMLFPGTAALWP
Ga0318574_104930813	3300031680	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLF
Ga0318496_101516094	3300031713	Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGA
Ga0318500_102910623	3300031724	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVTLG
Ga0306918_101366863	3300031744	Soil	MIVLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLG
Ga0306918_114939531	3300031744	Soil	MIVLLAVTLYATAGTVIAAAFLAFGVTRVLPAPAAVTL
Ga0318492_103228232	3300031748	Soil	MIVVLAVVLYAATGAVIAAAFLAFGVTRVLATPVPV
Ga0318537_100362611	3300031763	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFPG
Ga0318554_102620024	3300031765	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIVLFP
Ga0318521_104315811	3300031770	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPA
Ga0318546_107470732	3300031771	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPV
Ga0318543_100026971	3300031777	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPV
Ga0318566_104785241	3300031779	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIVLFPGTAALW
Ga0318529_102812861	3300031792	Soil	MIVLLALALYAAAGVVIAVAFLVFGVTRVLPEPAPV
Ga0318529_103944892	3300031792	Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTRGA
Ga0318503_100645113	3300031794	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVTLGARIVLFPGAVA
Ga0318503_101185343	3300031794	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARIM
Ga0318576_101637311	3300031796	Soil	VIVSLLALALYAAAGFAVAVAFLALGVTRVLPEPAPVTLGARIILFPGTAALWTYV
Ga0318523_103760551	3300031798	Soil	MIVLQAIALYAVAGIAIAACFLAFGVTRVLPTRSTMT
Ga0318517_101603751	3300031835	Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARI
Ga0318512_101057755	3300031846	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGA
Ga0318512_103886151	3300031846	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAP
Ga0306919_101071335	3300031879	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFPGTATL
Ga0318544_103289411	3300031880	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFPGTATLW
Ga0306925_111514523	3300031890	Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARL
Ga0306925_115058641	3300031890	Soil	MIMLLAVTLYATAGTVIAAAFLAFGVTRVLPAPAA
Ga0306923_101332855	3300031910	Soil	VLLAVELYAVAGVMIAVAFLAFGVTRVLPAPAPVMLGARIMLFPGVIALWP
Ga0306923_102350801	3300031910	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAP
Ga0306923_102707771	3300031910	Soil	MIVLLALVLYAAAGIAIAAAFLVFGVTRVLPEPAPVTLG
Ga0306923_117245101	3300031910	Soil	MIVLLAVTLYATAGTVIAAAFLAFGVTRVLPAPAAVTLGARIMLFPGVVALW
Ga0306921_107041161	3300031912	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLG
Ga0310916_103456161	3300031942	Soil	VIVSLLALALYAAAGFAVAVAFLALGVTRVLPEPAPVT
Ga0310913_101414161	3300031945	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVKRVLPEPAPVTLGARIMLFPGTAALW
Ga0310913_107598741	3300031945	Soil	MTVLLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIVLFPGTA
Ga0310909_100747741	3300031947	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARI
Ga0310909_103260541	3300031947	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVTLGARIVLFPGAVAL
Ga0306926_115594611	3300031954	Soil	VIMPLLTLALYAAAGIAIAAAFLVFGVTRVLPEPAPV
Ga0306926_120174191	3300031954	Soil	MIVLLALALYAAVGVVIAAAFLAFGVTRVLPDLASVTLGARIVL
Ga0318530_101170391	3300031959	Soil	MIVLLALVLYAAAGIVIAAAFLVFGVTRVLPEPAPVTLGARIVLFPGA
Ga0306922_106634323	3300032001	Soil	VNSNGICSSVIIVLLAVELYAVAGVVIAVAFLAFGVTRVLPTPAPVTLGAR
Ga0306922_112388573	3300032001	Soil	MILLQAVALYAAAGVVIAATFLAFGVTRVLPTCSSVTLGARI
Ga0318559_102876343	3300032039	Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTL
Ga0318556_100380614	3300032043	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVKRVLPEPAPVTLGARIMLFPGTAAL
Ga0318556_101234933	3300032043	Soil	MIMLLAVTLYATAGTVIAAAFLAFGVTRVLPTPAPVTLGARIMFFP
Ga0318532_100832871	3300032051	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLF
Ga0318506_102089022	3300032052	Soil	MIVLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIL
Ga0318533_113140041	3300032059	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPAPVT
Ga0318505_103216313	3300032060	Soil	MIVLLALALYAAAGIAIAAAFLVFGVTRVLPEPAPVTLGARLVL
Ga0306924_106596803	3300032076	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPGPVTLGARI
Ga0318577_100332155	3300032091	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVTLGARIVLF
Ga0318540_103678582	3300032094	Soil	MIVLLALTLYAATGIATAAAFLVFGVTRVLPEPAPVTLGARIVLFPGAVALPE
Ga0307470_106357381	3300032174	Hardwood Forest Soil	MIVLLAIALYAAAGIAIAAAFLAFGVTRVLPEPVPVTLGTRIVL
Ga0307470_113611412	3300032174	Hardwood Forest Soil	MIVLLAATLYAAAGIVIAAAFLAFGVTRVLPAPAAVTLGARIMLFPGAVA
Ga0307471_1003280041	3300032180	Hardwood Forest Soil	MILSLALYAAAGVAVGLAFVVFGVSRVLPEPAPVSIGARVLLFPGAA
Ga0307472_1008706511	3300032205	Hardwood Forest Soil	MIMLLALGLYAATGIAIAAAFLVFGVTRVLPKPVPVT
Ga0307472_1024882981	3300032205	Hardwood Forest Soil	MIVLLAATLYAAAGIVIAAAFLAFGVTRVLPAPAAVTLGARIMLFPG
Ga0306920_1023507301	3300032261	Soil	MIVLLALVLYAAAGIAIAAAFLMFGVTRVLPEPAPVTLGARIVLFPGAAA
Ga0306920_1024950513	3300032261	Soil	MIVLIALALYAAAGFAVAVAFLVFGVTRVLPEPAPVTLGARIMLFPGTAALW
Ga0318519_109249521	3300033290	Soil	VIVPLLALALYAAAGFAVAVAFLVFGVTRVLPEPG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences