Metagenome / Metatranscriptome Family F045846

Basic Information
Family ID	F045846
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	81 residues
Representative Sequence	MLNEGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Number of Associated Samples	131
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.23 %
% of genes near scaffold ends (potentially truncated)	34.87 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.553 % of family members)
Environment Ontology (ENVO)	Unclassified (36.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.447 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.55% β-sheet: 10.00% Coil/Unstructured: 45.45%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.127.1.0: automated matches	d6iemb_	6iem	0.60884
a.127.1.0: automated matches	d2j84a_	2j84	0.60554
f.13.1.0: automated matches	d3ddla_	3ddl	0.59743
f.13.1.0: automated matches	d6tk6a_	6tk6	0.59505
a.127.1.1: L-aspartase/fumarase	d1jswa_	1jsw	0.58852

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF12599	DUF3768	4.61
PF11306	DUF3108	2.63
PF13467	RHH_4	1.97
PF03401	TctC	1.32
PF00873	ACR_tran	1.32
PF06841	Phage_T4_gp19	1.32
PF13365	Trypsin_2	1.32
PF00561	Abhydrolase_1	1.32
PF07690	MFS_1	0.66
PF13531	SBP_bac_11	0.66
PF13358	DDE_3	0.66
PF00313	CSD	0.66
PF02371	Transposase_20	0.66
PF13565	HTH_32	0.66
PF02771	Acyl-CoA_dh_N	0.66
PF01042	Ribonuc_L-PSP	0.66
PF05362	Lon_C	0.66
PF00034	Cytochrom_C	0.66
PF04392	ABC_sub_bind	0.66
PF00106	adh_short	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.32
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.66
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.66
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.66
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.66

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.66 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.66 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.66 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.66 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.97 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	0.66 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.97 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	0.66 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN01AE8LR	Not Available	533	Open in IMG/M
3300000956\|JGI10216J12902_113557857	Not Available	648	Open in IMG/M
3300001431\|F14TB_107648982	Not Available	775	Open in IMG/M
3300001661\|JGI12053J15887_10094320	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300001661\|JGI12053J15887_10330360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	740	Open in IMG/M
3300004081\|Ga0063454_101864629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	528	Open in IMG/M
3300004114\|Ga0062593_100408758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300004463\|Ga0063356_102727340	Not Available	760	Open in IMG/M
3300004479\|Ga0062595_101103200	Not Available	694	Open in IMG/M
3300005165\|Ga0066869_10084123	Not Available	614	Open in IMG/M
3300005335\|Ga0070666_10406464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	979	Open in IMG/M
3300005338\|Ga0068868_101944433	Not Available	557	Open in IMG/M
3300005339\|Ga0070660_100689635	Not Available	856	Open in IMG/M
3300005344\|Ga0070661_101460093	Not Available	576	Open in IMG/M
3300005353\|Ga0070669_100965724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	730	Open in IMG/M
3300005355\|Ga0070671_101091269	Not Available	701	Open in IMG/M
3300005356\|Ga0070674_101500453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	606	Open in IMG/M
3300005365\|Ga0070688_101646087	Not Available	525	Open in IMG/M
3300005436\|Ga0070713_100065403	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300005455\|Ga0070663_100520597	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005457\|Ga0070662_100568961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300005457\|Ga0070662_101866278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	519	Open in IMG/M
3300005615\|Ga0070702_100870974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	703	Open in IMG/M
3300005842\|Ga0068858_100913643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	859	Open in IMG/M
3300006028\|Ga0070717_11268394	Not Available	670	Open in IMG/M
3300006195\|Ga0075366_10416795	Not Available	827	Open in IMG/M
3300006881\|Ga0068865_100866110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	783	Open in IMG/M
3300007076\|Ga0075435_100808925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	816	Open in IMG/M
3300009011\|Ga0105251_10408658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300009098\|Ga0105245_12140405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300009101\|Ga0105247_10338274	Not Available	1055	Open in IMG/M
3300009147\|Ga0114129_12726749	Not Available	588	Open in IMG/M
3300009156\|Ga0111538_10526992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1497	Open in IMG/M
3300009156\|Ga0111538_13155745	Not Available	574	Open in IMG/M
3300009162\|Ga0075423_12656838	Not Available	548	Open in IMG/M
3300009553\|Ga0105249_11594036	Not Available	725	Open in IMG/M
3300009553\|Ga0105249_13174306	Not Available	528	Open in IMG/M
3300010373\|Ga0134128_10522424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1323	Open in IMG/M
3300010375\|Ga0105239_11228241	Not Available	864	Open in IMG/M
3300010396\|Ga0134126_11855021	Not Available	660	Open in IMG/M
3300010399\|Ga0134127_12237186	Not Available	626	Open in IMG/M
3300010399\|Ga0134127_13322058	Not Available	526	Open in IMG/M
3300010400\|Ga0134122_10133251	Not Available	2004	Open in IMG/M
3300011119\|Ga0105246_10626650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300011119\|Ga0105246_11382631	Not Available	656	Open in IMG/M
3300011119\|Ga0105246_11524646	Not Available	629	Open in IMG/M
3300012203\|Ga0137399_10531884	Not Available	987	Open in IMG/M
3300012212\|Ga0150985_109224266	Not Available	523	Open in IMG/M
3300012469\|Ga0150984_120128318	Not Available	1174	Open in IMG/M
3300012951\|Ga0164300_10287765	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012958\|Ga0164299_11332710	Not Available	551	Open in IMG/M
3300012960\|Ga0164301_11789353	Not Available	516	Open in IMG/M
3300012961\|Ga0164302_10909494	Not Available	676	Open in IMG/M
3300012984\|Ga0164309_10480680	Not Available	946	Open in IMG/M
3300012985\|Ga0164308_10598568	Not Available	937	Open in IMG/M
3300012986\|Ga0164304_10220516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300013096\|Ga0157307_1042727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300013297\|Ga0157378_12088595	Not Available	617	Open in IMG/M
3300013306\|Ga0163162_10354801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1599	Open in IMG/M
3300013306\|Ga0163162_11776860	Not Available	705	Open in IMG/M
3300014325\|Ga0163163_10056029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3896	Open in IMG/M
3300014325\|Ga0163163_11098214	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300014745\|Ga0157377_10621770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300014968\|Ga0157379_12566960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300015077\|Ga0173483_10432658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300015242\|Ga0137412_10395182	Not Available	1071	Open in IMG/M
3300015371\|Ga0132258_13876875	Not Available	1017	Open in IMG/M
3300015372\|Ga0132256_100545258	Not Available	1272	Open in IMG/M
3300015372\|Ga0132256_103613796	Not Available	520	Open in IMG/M
3300015373\|Ga0132257_103922103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300018000\|Ga0184604_10344651	Not Available	530	Open in IMG/M
3300018027\|Ga0184605_10005416	Not Available	4610	Open in IMG/M
3300018054\|Ga0184621_10060357	Not Available	1286	Open in IMG/M
3300018061\|Ga0184619_10210290	Not Available	894	Open in IMG/M
3300018067\|Ga0184611_1100759	Not Available	1003	Open in IMG/M
3300018083\|Ga0184628_10128061	Not Available	1315	Open in IMG/M
3300018466\|Ga0190268_11324388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300019361\|Ga0173482_10458318	Not Available	608	Open in IMG/M
3300019878\|Ga0193715_1038199	Not Available	1037	Open in IMG/M
3300019887\|Ga0193729_1275363	Not Available	515	Open in IMG/M
3300019890\|Ga0193728_1304954	Not Available	601	Open in IMG/M
3300020001\|Ga0193731_1009884	Not Available	2448	Open in IMG/M
3300020002\|Ga0193730_1034551	Not Available	1465	Open in IMG/M
3300020018\|Ga0193721_1061323	Not Available	984	Open in IMG/M
3300021080\|Ga0210382_10240997	Not Available	790	Open in IMG/M
3300021082\|Ga0210380_10002731	All Organisms → cellular organisms → Bacteria	7273	Open in IMG/M
3300021363\|Ga0193699_10384993	Not Available	582	Open in IMG/M
3300022756\|Ga0222622_10495882	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300022756\|Ga0222622_10756535	Not Available	708	Open in IMG/M
3300025899\|Ga0207642_11009607	Not Available	536	Open in IMG/M
3300025901\|Ga0207688_10060344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2136	Open in IMG/M
3300025903\|Ga0207680_10586453	Not Available	797	Open in IMG/M
3300025930\|Ga0207701_10112365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	2434	Open in IMG/M
3300025932\|Ga0207690_10728869	Not Available	816	Open in IMG/M
3300025933\|Ga0207706_10369350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300025938\|Ga0207704_10631844	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300025941\|Ga0207711_11574775	Not Available	600	Open in IMG/M
3300025960\|Ga0207651_11887995	Not Available	537	Open in IMG/M
3300025972\|Ga0207668_10212629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1548	Open in IMG/M
3300025986\|Ga0207658_11697505	Not Available	577	Open in IMG/M
3300026075\|Ga0207708_10869661	Not Available	779	Open in IMG/M
3300026078\|Ga0207702_11147218	Not Available	771	Open in IMG/M
3300026089\|Ga0207648_10506996	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300026121\|Ga0207683_10356812	Not Available	1342	Open in IMG/M
3300027383\|Ga0209213_1025195	Not Available	1118	Open in IMG/M
3300027383\|Ga0209213_1037624	Not Available	914	Open in IMG/M
3300027388\|Ga0208995_1004017	All Organisms → cellular organisms → Bacteria → Proteobacteria	2408	Open in IMG/M
3300027388\|Ga0208995_1005075	Not Available	2180	Open in IMG/M
3300027388\|Ga0208995_1011943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1480	Open in IMG/M
3300027546\|Ga0208984_1005701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2243	Open in IMG/M
3300027633\|Ga0208988_1009488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2423	Open in IMG/M
3300027681\|Ga0208991_1002153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5717	Open in IMG/M
3300028704\|Ga0307321_1127721	Not Available	530	Open in IMG/M
3300028707\|Ga0307291_1197694	Not Available	518	Open in IMG/M
3300028707\|Ga0307291_1210207	Not Available	503	Open in IMG/M
3300028708\|Ga0307295_10096550	Not Available	794	Open in IMG/M
3300028710\|Ga0307322_10025697	Not Available	1375	Open in IMG/M
3300028711\|Ga0307293_10008662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2793	Open in IMG/M
3300028712\|Ga0307285_10145401	Not Available	647	Open in IMG/M
3300028713\|Ga0307303_10026346	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300028713\|Ga0307303_10050583	Not Available	879	Open in IMG/M
3300028715\|Ga0307313_10143209	Not Available	736	Open in IMG/M
3300028716\|Ga0307311_10037630	Not Available	1261	Open in IMG/M
3300028716\|Ga0307311_10202321	Not Available	583	Open in IMG/M
3300028719\|Ga0307301_10188711	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300028722\|Ga0307319_10097474	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300028722\|Ga0307319_10317397	Not Available	516	Open in IMG/M
3300028782\|Ga0307306_10065497	Not Available	927	Open in IMG/M
3300028793\|Ga0307299_10300288	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300028799\|Ga0307284_10114109	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300028802\|Ga0307503_10006456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3195	Open in IMG/M
3300028802\|Ga0307503_10327424	Not Available	778	Open in IMG/M
3300028807\|Ga0307305_10208761	Not Available	897	Open in IMG/M
3300028811\|Ga0307292_10030233	Not Available	1956	Open in IMG/M
3300028811\|Ga0307292_10315277	Not Available	657	Open in IMG/M
3300028814\|Ga0307302_10058501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	1800	Open in IMG/M
3300028824\|Ga0307310_10293824	Not Available	789	Open in IMG/M
3300028828\|Ga0307312_10665797	Not Available	689	Open in IMG/M
3300028876\|Ga0307286_10068782	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300028880\|Ga0307300_10021506	Not Available	1707	Open in IMG/M
3300030988\|Ga0308183_1056709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	801	Open in IMG/M
3300031093\|Ga0308197_10405090	Not Available	535	Open in IMG/M
3300031198\|Ga0307500_10135463	Not Available	692	Open in IMG/M
3300031421\|Ga0308194_10328638	Not Available	538	Open in IMG/M
3300031740\|Ga0307468_100261955	Not Available	1225	Open in IMG/M
3300031854\|Ga0310904_10107511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1546	Open in IMG/M
3300031858\|Ga0310892_10633113	Not Available	727	Open in IMG/M
3300031858\|Ga0310892_11155137	Not Available	551	Open in IMG/M
3300031892\|Ga0310893_10424925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300032174\|Ga0307470_10136796	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300033551\|Ga0247830_11639720	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.47%
Host-Associated	Host-Associated	35.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.89%
Plants	Host-Associated → Plants	35.53%
Aquatic	Environmental → Aquatic	6.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.87%
Sediment	Environmental → Aquatic → Sediment	5.26%
Roots	Host-Associated → Plants → Roots	1.97%
Freshwater	Environmental → Aquatic → Freshwater	1.32%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.84%
Loam	Environmental → Terrestrial → Soil → Loam	11.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.32%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.32%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.66%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.32%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.32%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_01574760	2170459013	Grass Soil	MLNHGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRSHWDRTVQLLLDMADPSEISRQLELALFTIGSSISKRPPQHSC
JGI10216J12902_1135578572	3300000956	Soil	MLNHGYIAQSLRRPLPTKDGGTLRTLADAANYIVALPEDRRRTHWDRTAQLILDLADTSEISRQLELALFYDRQLNLKTPPHAPQSGAASGSL*
F14TB_1076489821	3300001431	Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDSADASEISRQLELALFYDRQLNLKSPIST*
JGI12053J15887_100943202	3300001661	Forest Soil	MRGWELGEEGKGIRAVFEVYSHMLNHGYLAQTLRRPLPTKDGRTLRTVADAANYIVALPEDRRRNHWDRTVQLLLDMADPSELSRQLELALFYDRQLNLKTPTST*
JGI12053J15887_103303601	3300001661	Forest Soil	MLRSAYLSEKLRRPLATKDGDVLHTVSDAADYMVALPQDRRRAHWQRAAQLILDGADVPEISRQVELALFYDRKLHLGAMRA*
Ga0063454_1018646291	3300004081	Soil	MLNQGYIAQSLRRPLPTKDGGTLRTLGDAANYIVALPEDRRRTHWDRTAQLILDLADASEISRQLELALFYDRQLNLKTPPR*
Ga0062593_1004087582	3300004114	Soil	MLNHDYLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST*
Ga0063356_1027273402	3300004463	Arabidopsis Thaliana Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST*
Ga0062595_1011032001	3300004479	Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPIST*
Ga0066869_100841232	3300005165	Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNL
Ga0070666_104064641	3300005335	Switchgrass Rhizosphere	PLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST*
Ga0068868_1019444331	3300005338	Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSP
Ga0070660_1006896351	3300005339	Corn Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADPSEISRQLELALF
Ga0070661_1014600931	3300005344	Corn Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELAL
Ga0070669_1009657242	3300005353	Switchgrass Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLRNLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKMPPR*
Ga0070671_1010912691	3300005355	Switchgrass Rhizosphere	SQMLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST*
Ga0070674_1015004531	3300005356	Miscanthus Rhizosphere	MLNHDYLAQSLRRPLRTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0070688_1016460872	3300005365	Switchgrass Rhizosphere	LAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALLYDRQLNLKSPIST*
Ga0070713_1000654033	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLRTVADAANYIVALSEDGRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKTPTST*
Ga0070663_1005205972	3300005455	Corn Rhizosphere	MLNHGYLAQRLHRPLPTKDGGTLHTVANYIVALPEDRRRTYWDRAAKLLLDLADASELSRQLELALFL*
Ga0070662_1005689611	3300005457	Corn Rhizosphere	GTLSHMLNHDYLAQSLRRPLPTKDGGTLRNLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKIPAR*
Ga0070662_1018662781	3300005457	Corn Rhizosphere	LAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRIHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0070702_1008709741	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	YLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST*
Ga0068858_1009136432	3300005842	Switchgrass Rhizosphere	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLEIALFYDRQLNLRMRTST*
Ga0070717_112683941	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKT
Ga0075366_104167953	3300006195	Populus Endosphere	CLRYHSQMLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPIST*
Ga0068865_1008661101	3300006881	Miscanthus Rhizosphere	LRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0075435_1008089252	3300007076	Populus Rhizosphere	MLNHDYLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRPLELALFYDRQLNLKKPTST*
Ga0105251_104086582	3300009011	Switchgrass Rhizosphere	MLNHDYLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKMPPR*
Ga0105245_121404052	3300009098	Miscanthus Rhizosphere	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYILALPDERRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0105247_103382741	3300009101	Switchgrass Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAARYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPIST*
Ga0114129_127267491	3300009147	Populus Rhizosphere	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRIHWDRTVQLLLDMADPAEISRQLEGCFTIDCSTSESAPQHSC
Ga0111538_105269921	3300009156	Populus Rhizosphere	NHGYLAQKLRRALPTKDGGTLRTVADAANYIVTLPEDRRRPHWDRTVRLVLDMADPSEISRQLELALFYDRQLNLKTPPTST*
Ga0111538_131557451	3300009156	Populus Rhizosphere	LNHGYLAQRLRRPLSTKDGGTLRTVGDAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR*
Ga0075423_126568382	3300009162	Populus Rhizosphere	MLNHDYLAQSLRRPVPTKDGGTLRTVADAAIYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNQ
Ga0105249_115940361	3300009553	Switchgrass Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAARYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR*
Ga0105249_131743061	3300009553	Switchgrass Rhizosphere	MLNHDYLAQSLRRPVPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0134128_105224241	3300010373	Terrestrial Soil	MLNHGYLAQRLRRPLPTKDGGTLHTVANYIVALPEDRRRTYWDRAAKLLLDLADASELSRQLELALFL*
Ga0105239_112282413	3300010375	Corn Rhizosphere	MLNHDYLAQSLRRPLPTKDGGTLHTVADAANYILALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRIS
Ga0134126_118550211	3300010396	Terrestrial Soil	QTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST*
Ga0134127_122371862	3300010399	Terrestrial Soil	LPTKDGGTLHTVADAANYIVALPEDRRLTHWDRVAQLLLDLADAYELSRQLKLALFYDRQRNLKLPPR*
Ga0134127_133220581	3300010399	Terrestrial Soil	GGKGNSGRVSGTLSHMLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0134122_101332512	3300010400	Terrestrial Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALLYDRQLNLKSPTST*
Ga0105246_106266501	3300011119	Miscanthus Rhizosphere	LNHDYLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST*
Ga0105246_113826312	3300011119	Miscanthus Rhizosphere	MLNHGYIAQTLRRPLATKDGGTLRTLADAANYIIALPEDRRRSHWDRTAQLILDMADPSEISRQLELALFYDRQLKLKTSTSE*
Ga0105246_115246461	3300011119	Miscanthus Rhizosphere	LPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPIST*
Ga0137399_105318841	3300012203	Vadose Zone Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRPHWDRTAQLLLDLADAAEISRQLELALFYDRQLNFKTPPR*
Ga0150985_1092242662	3300012212	Avena Fatua Rhizosphere	GYIAQSLRRPLPTKDGGILRTLADAANYIVALPEDRRGTHWDRTAQLILDLADTSEISRQLELALFYDRQLNLKTPPHAPQSGAASGSL*
Ga0150984_1201283182	3300012469	Avena Fatua Rhizosphere	MLNHGYIAQSLRRPLPTKDGGILRTLADAANYIVALPEDRRRAHWDRTAQLILVLADASEISRQLELALFYDRQLNLKLPPR*
Ga0164300_102877651	3300012951	Soil	SDARMGIGTGGKGNSGLFEVYSRMLNHGYLAQTLRRPLPTKDGGTLRNLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTPPQHGY*
Ga0164299_113327102	3300012958	Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRQAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST*
Ga0164301_117893532	3300012960	Soil	MLNHGYLAQTLRRPLPTKDGGTLRNLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTST*
Ga0164302_109094941	3300012961	Soil	MLNHGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0164309_104806802	3300012984	Soil	MLNHGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTPTST*
Ga0164308_105985681	3300012985	Soil	MLNHGYLAKTLRRPLPTKDGGTLRTLADAANYILSLPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTPTST*
Ga0164304_102205161	3300012986	Soil	LPTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASELSRQLELALFYDRQLNLKMPPR*
Ga0157307_10427272	3300013096	Soil	MLNHDYLAQSLRRPLPTKDGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0157378_120885951	3300013297	Miscanthus Rhizosphere	KGNSGRVSGTLSHMLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0163162_103548013	3300013306	Switchgrass Rhizosphere	LNHGYLAQRLRRPLSTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR*
Ga0163162_117768601	3300013306	Switchgrass Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLRTLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTST*
Ga0163163_100560296	3300014325	Switchgrass Rhizosphere	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRIHWDRTVQLLLDMADPAEISRQLEGCFTIDCSTSESAPQHSC*
Ga0163163_110982142	3300014325	Switchgrass Rhizosphere	MLNHGYIAQTLRRPLATKDGGSLRTLADAANYIIALPEDRRRSHWDRTAQLILGMADPSEISRQLELALFYDRQL
Ga0157377_106217702	3300014745	Miscanthus Rhizosphere	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0157379_125669602	3300014968	Switchgrass Rhizosphere	MLNHDYLAQSLRRPVPTKDGGTLRTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASELSRQLELALFL*
Ga0173483_104326581	3300015077	Soil	RDFGRVSGILSPMLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPAEISRQLELALFYDRQLNLRMRTST*
Ga0137412_103951821	3300015242	Vadose Zone Soil	MLNHGYLAQKLRRPLPTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR*
Ga0132258_138768752	3300015371	Arabidopsis Rhizosphere	MLTHGYLAQTLRRPLPTKDGRTLRTLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKIPAR*
Ga0132256_1005452582	3300015372	Arabidopsis Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKTPPR*
Ga0132256_1036137962	3300015372	Arabidopsis Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLRTLADAANYILSLPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKIPAR*
Ga0132257_1039221031	3300015373	Arabidopsis Rhizosphere	RLSGTLSHMLNHDYLAQSLRRPVPTKDGGTLRTVADAAIYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLEIALFYDRQLNLRMRTST*
Ga0184604_103446511	3300018000	Groundwater Sediment	YLLAYVEPYLVQTLRRPLPTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0184605_1000541611	3300018027	Groundwater Sediment	MLNRGYRAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0184621_100603572	3300018054	Groundwater Sediment	MLNEGYLAQTLRRPLPTKDGRTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELALFYDRQLNFKTPPR
Ga0184619_102102902	3300018061	Groundwater Sediment	LRYLLAYVEPYLVQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADAAEICRQLELALFHDRQLNFKTPPR
Ga0184611_11007591	3300018067	Groundwater Sediment	LNHGYLAQRLRRPLSTKDGGTLRTVGDAANYIVALPEDRRRTHCDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0184628_101280612	3300018083	Groundwater Sediment	LSTKDGGTLRTVGDAANYIVALPEDRRRTHCDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0190268_113243882	3300018466	Soil	MLNLGYLAQTLRRPLPTKDGGTLHTVADAANYIVALPEDRRGAHWDRAAQLLLDLADAFEISRQLELALFYDRQLNLKLPPR
Ga0173482_104583181	3300019361	Soil	MLNHDYLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST
Ga0193715_10381991	3300019878	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELALFYDRQLNFKTPT
Ga0193729_12753632	3300019887	Soil	MLNHGYLAQRLRRPLPTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0193728_13049542	3300019890	Soil	MLNRGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFVT
Ga0193731_10098843	3300020001	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELALFYDRQLNFKTPPR
Ga0193730_10345512	3300020002	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQSSSPCSYDRQLNFKTPPR
Ga0193721_10613232	3300020018	Soil	LNSIAIRTNKGPRFEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELALFYDRQLNFKTPPR
Ga0210382_102409972	3300021080	Groundwater Sediment	MLNRGYRAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPTGRPSF
Ga0210380_100027315	3300021082	Groundwater Sediment	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST
Ga0193699_103849931	3300021363	Soil	MLNRAYLDQTLRRPLPLKDGRVLRTLADAAQYVVALPARRRAHWDCAALLPLNGADASEVSRQLELGLFYDRQ
Ga0222622_104958821	3300022756	Groundwater Sediment	RAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0222622_107565351	3300022756	Groundwater Sediment	QRLRRPLPTKDGATLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADAAEISRQLELALFHDRQLNFKTPPR
Ga0207642_110096072	3300025899	Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLRNLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTST
Ga0207688_100603442	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPIST
Ga0207680_105864531	3300025903	Switchgrass Rhizosphere	PLPTKDGGVLRTVADAANYIVALPEERRRTHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST
Ga0207701_101123652	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0207690_107288691	3300025932	Corn Rhizosphere	LAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST
Ga0207706_103693501	3300025933	Corn Rhizosphere	MLNHGYLAQRLRRPLPTKDGGTLHTVANYIVALPEDRRRTYWDRAAKLLLDLADASELSRQLELALFL
Ga0207704_106318442	3300025938	Miscanthus Rhizosphere	MLNHGYLAQRLRRPLPTKGGGTLRTVGDAANYIVALPEDRRRTHCDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0207711_115747751	3300025941	Switchgrass Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTLADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST
Ga0207651_118879951	3300025960	Switchgrass Rhizosphere	HSQMLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST
Ga0207668_102126292	3300025972	Switchgrass Rhizosphere	LNHGYLAQRLRRPLSTKDGGTLRTVGDAANYIVALPEDRRRTHCDRAAQLLLDLADASEISRQLELALFYDRQLNLKSPTST
Ga0207658_116975051	3300025986	Switchgrass Rhizosphere	AVLRRQRSAERLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPTST
Ga0207708_108696612	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNFKSPIST
Ga0207702_111472181	3300026078	Corn Rhizosphere	MLNHDYLAQSLRRPLPTKDGGVLRTVADAANYIVALPEERRRIHWDRTVQLLLDMADSSEISRQLELALFYDRQLNLKKPTST
Ga0207648_105069962	3300026089	Miscanthus Rhizosphere	MGVLSHMLNHGYLAQTLRRPLPTKDGGTLRTVADAAIYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLEIALFYDRQLNLRMRIST
Ga0207683_103568123	3300026121	Miscanthus Rhizosphere	MLNHGYLAQTLRRPLPTKDGGTLHTVADAARYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKSPIST
Ga0209213_10251951	3300027383	Forest Soil	MRGWELGEEGKGIRAVFEVYSHMLNHGYLAQTLRRPLPTKDGRTLRTVADAANYIVALPEDRRRNHWDRTVQLLLDMADPSELSRQLELALFYDRQLNLKTPTST
Ga0209213_10376242	3300027383	Forest Soil	MLRSAYLSEKLRRPLATKDGDVLHTVSDAADYMVALPQDRRRAHWQRAAQLILDGADAPEISRQVELALFYDRKLHLGAMRA
Ga0208995_10040173	3300027388	Forest Soil	MLNHGYLAQRLRRPLPTKDGGTLHTVADAANYIVALPQDRRRTHWDRAAQLLLDLVDASEISRQLELALFYDRQLNLKMPPR
Ga0208995_10050751	3300027388	Forest Soil	MLNHGYLAQTLRRPLPTKDGRTLRTVADAANYIVALPEDRRRNHWDRTVQLLLDMADPSELSRQLELALFYDRQLNLKTPTST
Ga0208995_10119434	3300027388	Forest Soil	MLRSAYLSAKLRRPLATKDGDVLRTVADAADYMVALPQDRRRAHWQRAAQLILDGADVPEISRQVELALFYDRKLHLGAMRA
Ga0208984_10057011	3300027546	Forest Soil	MLRSAYLSAKLRRPLATKDGDVLRTVADAADYMVALPQDRRRAHWQRAAQLILDGADAPEISRQVELALFYDRKLHLGAMRA
Ga0208988_10094883	3300027633	Forest Soil	MLRSAYLSAKLRRPLATKDGDVLRTVADAADYMVALPQDRRRAHWQRAAQLILGGADVPEISRQVELALFYDRKLHLGAMRA
Ga0208991_10021532	3300027681	Forest Soil	MLRSAYLSEKLRRPLATKDGDVLHTVSDAADYMVALPQDRRRAHWQRAAQLILDGADVPEISRQVELALFYDRKLHLGAMRA
Ga0307321_11277212	3300028704	Soil	KLRRPLPTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307291_11976942	3300028707	Soil	MLNRGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307291_12102071	3300028707	Soil	MLNHGYLAQRLRRPLPTKDGATLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQ
Ga0307295_100965502	3300028708	Soil	MLNEDYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELA
Ga0307322_100256971	3300028710	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELALFYDRQLNF
Ga0307293_100086623	3300028711	Soil	LPTKDGATLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307285_101454012	3300028712	Soil	MLNHGYLAQTLRRPLPTKDGGTLRTVADAVRYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKTPSR
Ga0307303_100263462	3300028713	Soil	MLNHGYLAQRLRRPLPTKDGATLHTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307303_100505831	3300028713	Soil	MLNQGYLAQTLRRPLPTKDGGTLRTVADAVKYIVALPENRRRAHWDRTAQLLLDLADAAEISRQLELALFYDRQLNFKTPPR
Ga0307313_101432092	3300028715	Soil	MLNHGYLAQTLRRALPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKTPPTST
Ga0307311_100376302	3300028716	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLELALFHDRQLNFKTPPR
Ga0307311_102023211	3300028716	Soil	MLNHGYLAQTLRRALPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKMPTGRPSF
Ga0307301_101887111	3300028719	Soil	QTLRRALPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKTPPTST
Ga0307319_100974741	3300028722	Soil	MLNHGYLAQRLRRPLPTKDGATLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307319_103173971	3300028722	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTSQLLLDLADAAEISRQLEL
Ga0307306_100654971	3300028782	Soil	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALSEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKMPPR
Ga0307299_103002881	3300028793	Soil	AYLSQKLRRPLPTKDRGTLQTVADAADYMVALPEERRRAHWQRAAQLLLDGADAPDLSRQVELALFYDRKLDFKAESIPEI
Ga0307284_101141092	3300028799	Soil	HMLNRGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307503_100064566	3300028802	Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALLYDRQLNLKSPTST
Ga0307503_103274242	3300028802	Soil	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLKDRSP
Ga0307305_102087612	3300028807	Soil	MLNHGYLAQTLRRALPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKTPTPR
Ga0307292_100302331	3300028811	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADAAEISRQLELALFYDRQLNFKTPPR
Ga0307292_103152772	3300028811	Soil	MLNHGYLAQTLRRPLPTKDGGTLRTLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTPPQHSY
Ga0307302_100585011	3300028814	Soil	MLNHGYLAQRLRRPLPTKDGATLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYDRQLN
Ga0307310_102938241	3300028824	Soil	MLNHGYLAQTLRRALPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLEL
Ga0307312_106657972	3300028828	Soil	MLNHGYLAQTLRRALPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKMPTST
Ga0307286_100687821	3300028876	Soil	LRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0307300_100215064	3300028880	Soil	MLNHGYLAQTLRRALPTKDGGTLRIVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKMPTS
Ga0307304_104416791	3300028885	Soil	PAYLSQKLRRPLPTKDRGTLQTVADAADYMVALPEERRRAHWKRAAQLLLDGADAPDLSRQVELALFYDRKLDFKAESIPEI
Ga0308183_10567091	3300030988	Soil	MLNEGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0308197_104050901	3300031093	Soil	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKMPPR
Ga0307500_101354631	3300031198	Soil	MLNHDYLAQSLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADPSEISRQLELALFYDRQLNLKMPR
Ga0308194_103286382	3300031421	Soil	RPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADAAEISRQLELALFHDRQLNFKTPPR
Ga0307468_1002619553	3300031740	Hardwood Forest Soil	MLNHGYLAQTLRRPLPTKDGGTLRTLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTPR
Ga0310904_101075112	3300031854	Soil	MLNHGYLAQTFRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKMPPR
Ga0310892_106331132	3300031858	Soil	MLNHGYLAQTLRRPLPTKDGGTLHTVADAAKYIVALPEDRRRAHWDRTAQLLLDLADASEISRQLELALFYDRQLNLKS
Ga0310892_111551372	3300031858	Soil	MLNHGYLAQTLRRPLPTKDGGTLRTVADAANYIVALPEDRRRTHWDRTVQLLLDMADSSEISRQLELAL
Ga0310893_104249252	3300031892	Soil	MLNHGYINQTLRRPLATKDGGSLRTLADAANYIIALPEDRRRSHWDRTAQLILDMADPSEISRQLELALFYDRQLNLKRPLQHTC
Ga0307470_101367962	3300032174	Hardwood Forest Soil	LPTKDGGTLHTVADAANYIVALPEDRRRTHWDRAAQLLLDLADASEISRQLELALFYYRQLNLKMLPR
Ga0247830_116397201	3300033551	Soil	QTLRRPLPTKDGGTLRTLADAANYILALPEDRRRTHWDRTVHLLLDMADPSEISRQLELALFYDRQLNLKTPR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045846

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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