Metagenome / Metatranscriptome Family F045740

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F045740
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	43 residues
Representative Sequence	AAAVATVVTLPYGVLVGVLLYLDLRARKENLTLEALRADLQASAA
Number of Associated Samples	97
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.26 %
% of genes near scaffold ends (potentially truncated)	90.13 %
% of genes from short scaffolds (< 2000 bps)	84.87 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (53.289 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.658 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.184 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.05% β-sheet: 0.00% Coil/Unstructured: 47.95%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF07992	Pyr_redox_2	6.58
PF03795	YCII	5.92
PF00144	Beta-lactamase	4.61
PF01569	PAP2	2.63
PF08734	GYD	2.63
PF13473	Cupredoxin_1	2.63
PF02652	Lactate_perm	1.97
PF02371	Transposase_20	1.97
PF00589	Phage_integrase	1.97
PF03006	HlyIII	1.97
PF10604	Polyketide_cyc2	1.97
PF01513	NAD_kinase	1.97
PF14329	DUF4386	1.32
PF12697	Abhydrolase_6	1.32
PF00999	Na_H_Exchanger	1.32
PF13427	DUF4111	1.32
PF08031	BBE	1.32
PF01243	Putative_PNPOx	1.32
PF11716	MDMPI_N	0.66
PF13683	rve_3	0.66
PF01610	DDE_Tnp_ISL3	0.66
PF00406	ADK	0.66
PF06305	LapA_dom	0.66
PF01850	PIN	0.66
PF03992	ABM	0.66
PF14230	DUF4333	0.66
PF00890	FAD_binding_2	0.66
PF12146	Hydrolase_4	0.66
PF13401	AAA_22	0.66
PF12728	HTH_17	0.66
PF10648	Gmad2	0.66
PF16158	N_BRCA1_IG	0.66
PF02036	SCP2	0.66
PF00535	Glycos_transf_2	0.66
PF00892	EamA	0.66
PF00107	ADH_zinc_N	0.66
PF12695	Abhydrolase_5	0.66
PF08281	Sigma70_r4_2	0.66
PF00583	Acetyltransf_1	0.66
PF00196	GerE	0.66
PF01794	Ferric_reduct	0.66
PF07452	CHRD	0.66
PF00582	Usp	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	4.61
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	4.61
COG2367	Beta-lactamase class A	Defense mechanisms [V]	4.61
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	2.63
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.97
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	1.97
COG1620	L-lactate permease	Energy production and conversion [C]	1.97
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.32
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.32
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.32
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.32
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.32
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.32
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.66
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.66
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.29 %
Unclassified	root	N/A	46.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.29 %
Unclassified	root	N/A	46.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.29 %
Unclassified	root	N/A	46.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.32 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.61 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.66 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.76 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.97 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.66 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.66 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	6.58 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	1.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.97 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.32 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.66 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.66 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.66 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.66 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.66 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	5.26 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.97 %
Bogoriellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae	1.32 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.32 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.66 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.66 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.66 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	5.26 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.97 %
Georgenia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia	1.32 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.66 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.66 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.66 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	5.26 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.97 %
unclassified Georgenia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → unclassified Georgenia	1.32 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.66 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.66 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.71 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	5.26 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.97 %
Georgenia sp. EYE_87	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → unclassified Georgenia → Georgenia sp. EYE_87	1.32 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	0.66 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.66 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0953244	Not Available	511	Open in IMG/M
3300000550\|F24TB_10856263	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300000956\|JGI10216J12902_107585837	Not Available	774	Open in IMG/M
3300000956\|JGI10216J12902_122670887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	986	Open in IMG/M
3300003373\|JGI25407J50210_10173332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	532	Open in IMG/M
3300005518\|Ga0070699_100387899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1262	Open in IMG/M
3300005562\|Ga0058697_10207849	Not Available	890	Open in IMG/M
3300005981\|Ga0081538_10016233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5722	Open in IMG/M
3300005981\|Ga0081538_10017708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5392	Open in IMG/M
3300005981\|Ga0081538_10117833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1285	Open in IMG/M
3300005985\|Ga0081539_10029947	All Organisms → cellular organisms → Bacteria	3389	Open in IMG/M
3300006572\|Ga0074051_10306619	Not Available	649	Open in IMG/M
3300006844\|Ga0075428_100935119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	919	Open in IMG/M
3300006845\|Ga0075421_100635002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300006871\|Ga0075434_101825109	Not Available	615	Open in IMG/M
3300009100\|Ga0075418_11255626	Not Available	803	Open in IMG/M
3300009156\|Ga0111538_13723803	Not Available	528	Open in IMG/M
3300009162\|Ga0075423_12729140	Not Available	541	Open in IMG/M
3300009815\|Ga0105070_1055273	Not Available	740	Open in IMG/M
3300009821\|Ga0105064_1054577	Not Available	774	Open in IMG/M
3300009836\|Ga0105068_1008376	Not Available	1650	Open in IMG/M
3300010036\|Ga0126305_11115983	Not Available	543	Open in IMG/M
3300010038\|Ga0126315_10016779	All Organisms → cellular organisms → Bacteria	3600	Open in IMG/M
3300010038\|Ga0126315_10292785	Not Available	1003	Open in IMG/M
3300010038\|Ga0126315_10567850	Not Available	730	Open in IMG/M
3300010038\|Ga0126315_10575649	Not Available	725	Open in IMG/M
3300010042\|Ga0126314_10393141	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300010044\|Ga0126310_10181811	Not Available	1367	Open in IMG/M
3300010044\|Ga0126310_10302487	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300010044\|Ga0126310_10478264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	905	Open in IMG/M
3300010045\|Ga0126311_10476669	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300010045\|Ga0126311_11839165	Not Available	514	Open in IMG/M
3300010166\|Ga0126306_10014124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5139	Open in IMG/M
3300010166\|Ga0126306_10368740	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300010166\|Ga0126306_11287570	Not Available	603	Open in IMG/M
3300012204\|Ga0137374_10001205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29016	Open in IMG/M
3300012204\|Ga0137374_10058919	All Organisms → cellular organisms → Bacteria	3875	Open in IMG/M
3300012350\|Ga0137372_10348718	Not Available	1134	Open in IMG/M
3300012350\|Ga0137372_10764623	Not Available	695	Open in IMG/M
3300012351\|Ga0137386_10822718	Not Available	667	Open in IMG/M
3300012353\|Ga0137367_10069538	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300012353\|Ga0137367_10075798	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300012356\|Ga0137371_10241264	Not Available	1412	Open in IMG/M
3300012359\|Ga0137385_10442663	Not Available	1104	Open in IMG/M
3300012360\|Ga0137375_10231798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1720	Open in IMG/M
3300012938\|Ga0162651_100073761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	564	Open in IMG/M
3300014487\|Ga0182000_10240075	Not Available	720	Open in IMG/M
3300014487\|Ga0182000_10333202	Not Available	647	Open in IMG/M
3300015371\|Ga0132258_10166120	All Organisms → cellular organisms → Bacteria	5314	Open in IMG/M
3300015371\|Ga0132258_10695582	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300015374\|Ga0132255_100847279	Not Available	1364	Open in IMG/M
3300017792\|Ga0163161_10277385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1314	Open in IMG/M
3300017965\|Ga0190266_10919710	Not Available	576	Open in IMG/M
3300017965\|Ga0190266_11049898	Not Available	550	Open in IMG/M
3300018028\|Ga0184608_10168829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300018028\|Ga0184608_10333638	Not Available	666	Open in IMG/M
3300018075\|Ga0184632_10001413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9833	Open in IMG/M
3300018075\|Ga0184632_10008206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4359	Open in IMG/M
3300018076\|Ga0184609_10204346	Not Available	920	Open in IMG/M
3300018476\|Ga0190274_10074327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2583	Open in IMG/M
3300018476\|Ga0190274_13775218	Not Available	512	Open in IMG/M
3300019279\|Ga0184642_1629667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300022756\|Ga0222622_10040201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2570	Open in IMG/M
3300025933\|Ga0207706_11366899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	583	Open in IMG/M
3300026790\|Ga0208710_100423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2049	Open in IMG/M
3300027056\|Ga0209879_1048381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300027718\|Ga0209795_10241117	Not Available	506	Open in IMG/M
3300027750\|Ga0209461_10082531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	705	Open in IMG/M
3300027809\|Ga0209574_10036374	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300027809\|Ga0209574_10130960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	746	Open in IMG/M
3300027809\|Ga0209574_10185683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300027907\|Ga0207428_11066160	Not Available	566	Open in IMG/M
3300027909\|Ga0209382_10869998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300028589\|Ga0247818_10561269	Not Available	782	Open in IMG/M
3300028712\|Ga0307285_10042440	Not Available	1118	Open in IMG/M
3300028717\|Ga0307298_10092080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300028717\|Ga0307298_10173990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	630	Open in IMG/M
3300028719\|Ga0307301_10058395	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300028719\|Ga0307301_10175514	Not Available	693	Open in IMG/M
3300028720\|Ga0307317_10300356	Not Available	542	Open in IMG/M
3300028722\|Ga0307319_10046631	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300028722\|Ga0307319_10055487	Not Available	1246	Open in IMG/M
3300028744\|Ga0307318_10006933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3660	Open in IMG/M
3300028744\|Ga0307318_10072026	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300028744\|Ga0307318_10108443	Not Available	942	Open in IMG/M
3300028744\|Ga0307318_10339425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	528	Open in IMG/M
3300028771\|Ga0307320_10185467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	811	Open in IMG/M
3300028771\|Ga0307320_10481777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300028778\|Ga0307288_10117794	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300028787\|Ga0307323_10020232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → unclassified Georgenia → Georgenia sp. EYE_87	2273	Open in IMG/M
3300028791\|Ga0307290_10214250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	706	Open in IMG/M
3300028796\|Ga0307287_10030152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1933	Open in IMG/M
3300028796\|Ga0307287_10397970	Not Available	518	Open in IMG/M
3300028807\|Ga0307305_10408640	Not Available	613	Open in IMG/M
3300028810\|Ga0307294_10075054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → unclassified Georgenia → Georgenia sp. EYE_87	1030	Open in IMG/M
3300028814\|Ga0307302_10417943	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300028819\|Ga0307296_10017946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3711	Open in IMG/M
3300028819\|Ga0307296_10461659	Not Available	695	Open in IMG/M
3300028872\|Ga0307314_10293592	Not Available	516	Open in IMG/M
3300028875\|Ga0307289_10007845	All Organisms → cellular organisms → Bacteria	4098	Open in IMG/M
3300028875\|Ga0307289_10170336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	895	Open in IMG/M
3300028876\|Ga0307286_10279738	Not Available	614	Open in IMG/M
3300028878\|Ga0307278_10211001	Not Available	865	Open in IMG/M
3300028878\|Ga0307278_10318895	Not Available	686	Open in IMG/M
3300028880\|Ga0307300_10004041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3709	Open in IMG/M
3300028880\|Ga0307300_10271569	Not Available	567	Open in IMG/M
3300028881\|Ga0307277_10424419	Not Available	595	Open in IMG/M
3300028889\|Ga0247827_10506297	All Organisms → cellular organisms → Bacteria → Terrabacteria group	756	Open in IMG/M
3300030336\|Ga0247826_10225433	Not Available	1299	Open in IMG/M
3300030336\|Ga0247826_11383356	Not Available	568	Open in IMG/M
3300030499\|Ga0268259_10076948	Not Available	718	Open in IMG/M
3300030511\|Ga0268241_10147572	Not Available	573	Open in IMG/M
3300030514\|Ga0268253_10008676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2275	Open in IMG/M
3300030516\|Ga0268255_10130329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	744	Open in IMG/M
3300030988\|Ga0308183_1122627	Not Available	615	Open in IMG/M
3300031505\|Ga0308150_1033760	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031731\|Ga0307405_10211110	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1417	Open in IMG/M
3300031731\|Ga0307405_11473125	Not Available	597	Open in IMG/M
3300031824\|Ga0307413_10089019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2004	Open in IMG/M
3300031824\|Ga0307413_10567586	All Organisms → cellular organisms → Bacteria → Terrabacteria group	923	Open in IMG/M
3300031824\|Ga0307413_11093926	Not Available	688	Open in IMG/M
3300031824\|Ga0307413_12109456	Not Available	510	Open in IMG/M
3300031852\|Ga0307410_10806242	Not Available	799	Open in IMG/M
3300031852\|Ga0307410_10967568	Not Available	732	Open in IMG/M
3300031852\|Ga0307410_11813763	Not Available	542	Open in IMG/M
3300031901\|Ga0307406_10149697	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300031901\|Ga0307406_11175645	Not Available	665	Open in IMG/M
3300031901\|Ga0307406_11641626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300031903\|Ga0307407_11455850	Not Available	541	Open in IMG/M
3300031911\|Ga0307412_12331061	Not Available	500	Open in IMG/M
3300031995\|Ga0307409_100518317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1164	Open in IMG/M
3300031995\|Ga0307409_100956925	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031995\|Ga0307409_101473569	All Organisms → cellular organisms → Bacteria → Terrabacteria group	708	Open in IMG/M
3300031995\|Ga0307409_102862564	Not Available	510	Open in IMG/M
3300032002\|Ga0307416_100822930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300032002\|Ga0307416_102968263	Not Available	567	Open in IMG/M
3300032004\|Ga0307414_10349954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1268	Open in IMG/M
3300032004\|Ga0307414_10735874	Not Available	895	Open in IMG/M
3300032004\|Ga0307414_11589610	Not Available	609	Open in IMG/M
3300032005\|Ga0307411_10123333	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1879	Open in IMG/M
3300032005\|Ga0307411_10751385	Not Available	854	Open in IMG/M
3300032126\|Ga0307415_100143846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1825	Open in IMG/M
3300032126\|Ga0307415_100175880	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300032126\|Ga0307415_100351787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1240	Open in IMG/M
3300032126\|Ga0307415_100878435	All Organisms → cellular organisms → Bacteria → Terrabacteria group	825	Open in IMG/M
3300032126\|Ga0307415_102511742	Not Available	507	Open in IMG/M
3300032159\|Ga0268251_10074736	Not Available	1162	Open in IMG/M
3300033004\|Ga0335084_11556718	Not Available	652	Open in IMG/M
3300033550\|Ga0247829_11813960	Not Available	503	Open in IMG/M
3300034172\|Ga0334913_036922	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300034172\|Ga0334913_049155	All Organisms → cellular organisms → Bacteria → Terrabacteria group	896	Open in IMG/M
3300034174\|Ga0334932_040369	All Organisms → cellular organisms → Bacteria → Terrabacteria group	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.84%
Host-Associated	Host-Associated	38.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.24%
Plants	Host-Associated → Plants	38.16%
Aquatic	Environmental → Aquatic	4.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.66%
Phylloplane	Host-Associated → Plants → Phylloplane	5.26%
Sediment	Environmental → Aquatic → Sediment	3.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.29%
Roots	Host-Associated → Plants → Roots	2.63%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.95%
Sand	Environmental → Terrestrial → Soil → Sand	2.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.63%
Loam	Environmental → Terrestrial → Soil → Loam	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.32%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.29%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.97%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.66%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	19.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.26%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.97%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.32%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.32%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.66%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031505	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_139 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09532441	2228664021	Soil	VTMPYGALVGVLLYLDLRARKERLDLDTLKADLQASTA
F24TB_108562631	3300000550	Soil	PYSVLVGVLLYLDLRARKETLNLERLRADLQASAT*
JGI10216J12902_1075858371	3300000956	Soil	TLPYGVLVGVLLYLDLRARKERLTRETLRADLQASAA*
JGI10216J12902_1226708873	3300000956	Soil	YGTLVGVLLYLDLRARKEQLTLERLRADLQASAT*
JGI25407J50210_101733321	3300003373	Tabebuia Heterophylla Rhizosphere	QGLVSAVATTVTMPYGVLVGVLLYLDLRARKENLTLERLRTDLQASAT*
Ga0070699_1003878993	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VATVVTLPYGALVGVLLYLDLRTRKERLDLETLRADLQASAA*
Ga0058697_102078491	3300005562	Agave	WFVQAIAAAVATVVTLPYSVLVGVLLYLDLRARKEDLSLETLRADLQASAT*
Ga0081538_100162331	3300005981	Tabebuia Heterophylla Rhizosphere	AAVATVVTLPYGVLAGVLLYLDLRARKENLNVERLRADLQASAA*
Ga0081538_100177086	3300005981	Tabebuia Heterophylla Rhizosphere	VATVVTLPYGVLAGVLLYLDLRARKENLNVERLRADLQASAADPW*
Ga0081538_101178334	3300005981	Tabebuia Heterophylla Rhizosphere	TTVTMPYGVLVGVLLYLDLRARKENLTLEALRADLQASAA*
Ga0081539_100299472	3300005985	Tabebuia Heterophylla Rhizosphere	MKHQIEVGVLLYLDLRARNGQLTLERLRADLQASAA*
Ga0074051_103066192	3300006572	Soil	PYGALVGVLLYLDLRARRERLDLDTLKTDLQASTA*
Ga0075428_1009351191	3300006844	Populus Rhizosphere	VHDTTGVATVVTLPYGTLVGVLLYLDAARKEQLTLERPRADLQASAT*
Ga0075421_1006350021	3300006845	Populus Rhizosphere	VVTLPYGVLVGVLLYLDLRARKERLTLETLRADLQASAA*
Ga0075434_1018251091	3300006871	Populus Rhizosphere	VVTLPYGVLVGVLLYLDLRARNEQLTLERLRADLQASAA*
Ga0075418_112556261	3300009100	Populus Rhizosphere	LPYGALVGVLLYLDLRARKERLDLDTLKANLQASTA*
Ga0111538_137238032	3300009156	Populus Rhizosphere	YGVLVGVLLYLDLRARKEALTLERLRADLQASAS*
Ga0075423_127291402	3300009162	Populus Rhizosphere	MPYGALVGVLLYLDLRARRERLDLDTLKTDLQASTA*
Ga0105070_10552731	3300009815	Groundwater Sand	TLPYGVLVGVLLYLDLRARKENLTLETLRADLQTSAA*
Ga0105064_10545772	3300009821	Groundwater Sand	VATTVTLPYGALVGVLLYLDLRTRKEGLDLDTVKANLEASTA*
Ga0105068_10083761	3300009836	Groundwater Sand	GVAAAVATVVTLPYGVLVGVLLYLDLRARKENLTLETLRADLQASAA*
Ga0126305_111159831	3300010036	Serpentine Soil	TTVTLPYGALVGVLLYLDLRARKERLDLGPLTADLQASTA*
Ga0126315_100167792	3300010038	Serpentine Soil	MPYGALVGVVLDLDLRARKGRLELDTLKTDLQTSAAFLEPGG*
Ga0126315_102927852	3300010038	Serpentine Soil	VATVITLPYGVLVGVLLYLDLRARKEQLNLERLRTDLQASAT*
Ga0126315_105678502	3300010038	Serpentine Soil	AAAVATVITLPYGVLVGVLLYLDLRARKENLNLERLRADLQASAA*
Ga0126315_105756492	3300010038	Serpentine Soil	FVQGVVAAVATVITMPYGVLVGVLLYLDLRARKENLTLETLRTDLQASAA*
Ga0126314_103931412	3300010042	Serpentine Soil	IAAAVATVITLPYGVLVGVLLYLDLRARKEQLNLERLRTDLQASAT*
Ga0126310_101818111	3300010044	Serpentine Soil	AVAAAVATVITLPYGVLVGVLLYLDLRARKEQLTLERLRTDLQASAT*
Ga0126310_103024871	3300010044	Serpentine Soil	TMPYSVLVGVLLYLDLRARKEQLTLERLRTDLQASAT*
Ga0126310_104782641	3300010044	Serpentine Soil	QTVVAAIATTITLPYGALVGVLLYLDLRARKETLTLETLRADLQASAA*
Ga0126311_104766691	3300010045	Serpentine Soil	QGLVAAVATVITMPYGVLVGVLLYLDLRARKENQTMEALRTDLQASAA*
Ga0126311_118391651	3300010045	Serpentine Soil	IATVITMPYSVLVGVLLYLDLRARKEQLNLDRLRADLQASAT*
Ga0126306_100141245	3300010166	Serpentine Soil	VATTVTLPYGALVGVLLYLDLRARKERLDLDTLKADLQASAA*
Ga0126306_103687401	3300010166	Serpentine Soil	YGVLVGVLLYLDLRARKEQLNLERLRTDLQASAT*
Ga0126306_112875701	3300010166	Serpentine Soil	VITMPYGVLVGVLLYLDLRARKENLTLETLRTDLQASAA*
Ga0137374_100012056	3300012204	Vadose Zone Soil	VQGLAAAVATVVTLPYGALVGVLLYLDLRARKERLDLDTLRADLQASAA*
Ga0137374_100589191	3300012204	Vadose Zone Soil	VVTLPYGVLVGVLLYLDLRARKENLTLEALRADLQASAA*
Ga0137372_103487182	3300012350	Vadose Zone Soil	TLPYGALVGVLLYLDLRARKERLDLETLRADLQASAA*
Ga0137372_107646231	3300012350	Vadose Zone Soil	TIVTLPYTTLVGVLLYLDLRARKEALTLDTLRADLQRSTA*
Ga0137386_108227182	3300012351	Vadose Zone Soil	AWFVQGVAAAVATIVTLPFEALVGVLLYLDLRARKERLDLDTLKADLQASAA*
Ga0137367_100695385	3300012353	Vadose Zone Soil	AAAVATVVTLPYGVLVGVLLYLDLRARKENLTLEALRADLQASAA*
Ga0137367_100757984	3300012353	Vadose Zone Soil	AAAVATVVTLPYGVLVGVLLYLDLRARKENLTLEALRADLRASAA*
Ga0137371_102412643	3300012356	Vadose Zone Soil	MWAWCSSRSTVVTLPYGALVGVLLYLDLRARKERLDLDTLRADLQASAA*
Ga0137385_104426632	3300012359	Vadose Zone Soil	QGVAAAVATVVTLPYGALVGVLLYLDLRARKERLDLETLRADLQASAA*
Ga0137375_102317983	3300012360	Vadose Zone Soil	VVQALAAAVATVVTLPYGVLVGVLLYLDLRARKENLTLEALRADLQASAA*
Ga0162651_1000737611	3300012938	Soil	AVAAAVATVVTLPYGVLVGVLLYLDLRARKESLTMETLRTDLQASAA*
Ga0182000_102400751	3300014487	Soil	VAAIATVITLPYGTLVGVLLYLDLRARKEQLTLERLRADLQASAT*
Ga0182000_103332021	3300014487	Soil	AVATVITMPYSVLVGVLLYLDLRARKENLNLERLRTDLQTSAA*
Ga0132258_101661201	3300015371	Arabidopsis Rhizosphere	TSWFLQAVVAAVATVITLPYGTLVGVLLYLDLRARKEQLTLEGLRADLQASAT*
Ga0132258_106955825	3300015371	Arabidopsis Rhizosphere	YGTLVGVLLYLDLRARKEQLTLERLRADLQTSAN*
Ga0132255_1008472791	3300015374	Arabidopsis Rhizosphere	VAAVATVITLPYGTLVGVLLYLDLRARKEQLTLERLRADLQTSAN*
Ga0163161_102773852	3300017792	Switchgrass Rhizosphere	AAVATVVTLPYGVLVGVLLYLDLRARKERLTMEALRADLQASAT
Ga0190266_109197101	3300017965	Soil	NTSWFVQAIAAAIATVITLPYGVLVGVLLYLDLRARKETLTLERLRTDLQTSAT
Ga0190266_110498982	3300017965	Soil	AAAVATVITMPYSVLVGVLLYLDLRARKEQLTLERLRADLQASAT
Ga0184608_101688291	3300018028	Groundwater Sediment	TVVTLPYSTLVGLLLYLDLRARKESLTMDTLRTDLQASAA
Ga0184608_103336382	3300018028	Groundwater Sediment	VAAAIATTVTLPYGALVGVLLYLDLRARKERLDLDTLKANLHASTA
Ga0184632_100014131	3300018075	Groundwater Sediment	NWFAQGVAAAVATVITLPYGVLVGVLLYLDLRARKENLTLEALRADLQASAA
Ga0184632_100082061	3300018075	Groundwater Sediment	NWFAQGVAAAVATVITLPYGVLVGVLLYLDLRARKENLTLETLRADLQASAA
Ga0184609_102043461	3300018076	Groundwater Sediment	VQGIAAAVATTVTLPYGALVGVLLYLDLRARKERLHLDTLKADLQASTA
Ga0190274_100743273	3300018476	Soil	VATTVTLPYGALVGVLLYLDLRARKERLDLDTLKADLQASAA
Ga0190274_137752181	3300018476	Soil	IVAAVATVVTLPYGVLVGVLLYLDLRARKEQLTLETLRTDLQASAA
Ga0184642_16296671	3300019279	Groundwater Sediment	QGVAAAVATIVTLPFGALVGVLLYLDLRARKEPLDLDTLKTDLQATGA
Ga0222622_100402013	3300022756	Groundwater Sediment	VATVVTLPYSALVGVLLYLDLRARKESLTLETLTTDLQASAA
Ga0207706_113668992	3300025933	Corn Rhizosphere	VQAVAAAVATVVTLPYSALVGVLLYLDLRARKESLTMETLRTDLQASAT
Ga0208710_1004231	3300026790	Soil	AIATVITLPYGVLVGVLLYLDLRARKEQLTLDRLRADLQASAT
Ga0209879_10483812	3300027056	Groundwater Sand	TVVTLPYGVLVGVLLYLDLRARKERLTMETLRADLQASAA
Ga0209795_102411171	3300027718	Agave	GQAVAAAVATVITLPYSTLVGVLLYLDLRARKENLTLERLQADLQASAT
Ga0209461_100825312	3300027750	Agave	LPYSALVGVLLYLDLRARKERLTLEALTTDLQASAA
Ga0209574_100363741	3300027809	Agave	TMPYGVLVGALLYLDMRARKENLTLDTLRTDLQASAA
Ga0209574_101309602	3300027809	Agave	VVAAVATTITLPYGALVGVLLYLDLRARKETLTLETLRADLAASAA
Ga0209574_101856831	3300027809	Agave	TVTLPFGALVGVLLYLDLRARKERLDLDTLTTDLETSAA
Ga0207428_110661602	3300027907	Populus Rhizosphere	TTVTLPYGALVGVLLYLDLRARKERLDLDTLKANLQASTA
Ga0209382_108699981	3300027909	Populus Rhizosphere	TLPYGALIGVLLYLDLRARKERLTLETLRADLQASAA
Ga0247818_105612691	3300028589	Soil	IVTMPYGALVGVLLYLDLRARRERLDLDTLKTDLQSSTA
Ga0307285_100424401	3300028712	Soil	VQAVVAAVATVVTLPYGVLVGVLLYLDLRARKESLTMEALRADLQASAA
Ga0307298_100920801	3300028717	Soil	PYGALVGVLLYLDLRARKEPLDLDTLKANLQATAA
Ga0307298_101739901	3300028717	Soil	QAVAAAVATVVTLPYSALVGVLLYLDLRARKESLTMETLRTDLQASAA
Ga0307301_100583951	3300028719	Soil	QAVVAAVATVVTLPYGVLVGVLLYLDLRARKESLTMEALRADLQASAA
Ga0307301_101755142	3300028719	Soil	AAVATTVTLPYGALVGVLLYLDLRARKERLDLDTLKANLQASTA
Ga0307317_103003561	3300028720	Soil	TVVILPYGVLVGVLLYLDLRARKERLTLEALRADLQASAT
Ga0307319_100466311	3300028722	Soil	VATVVTLPYGVLVGVLLYLDLRARKESLTMEALRADLQASAA
Ga0307319_100554871	3300028722	Soil	ATVVTLPYGVLVGVLLYLDLRARKESLTMEALRADLQASAA
Ga0307318_100069336	3300028744	Soil	FLQAVVAAMATVITLPYGTLVGVLLYLDLRARKEQLTLERLRADLQASAT
Ga0307318_100720263	3300028744	Soil	QAVVAAVATVVTLPYGVLVGVLLYLDLRARKERLTLEALRADLQASAT
Ga0307318_101084433	3300028744	Soil	TTVTLPYGALVGVLLYLDLRARKEPLDLGTIKADLQASTA
Ga0307318_103394251	3300028744	Soil	SGAAAVATVVTLPYSALVGVLLYLDLRARKESLTLETLTTDLQASAA
Ga0307320_101854671	3300028771	Soil	WFVQAVAAAVATVVTLPYSALVGVLLYLDLRARKESLTMEALRTDLEASAA
Ga0307320_104817771	3300028771	Soil	VVTLPYGVLVGVLLYLDLRARKEGLTLETVRTDLQASAA
Ga0307288_101177942	3300028778	Soil	TVVTLPYGVLVGVLLYLDLRARKERLTLEALRADLQASAT
Ga0307323_100202321	3300028787	Soil	TLPYGTLVGVLLYLDLRARKEQLTLERLRADLQESAT
Ga0307290_102142501	3300028791	Soil	VAALLLVPYGAAVLVVLYLDLRARKERVDLEVLTADLRASAA
Ga0307287_100301521	3300028796	Soil	LLQGIAAAVATIVTLPYGALVGVLLYLDLRARKEPLDLDTLKANLQATAA
Ga0307287_103979702	3300028796	Soil	WFVQAVAAAVATVVTLPYSALVGVLLYLDLRARKESLTMDTLRTDLQASAA
Ga0307305_104086402	3300028807	Soil	VRRATVVTLPYSALVGVLLYLDLRARKERLDHATLRADLQASAA
Ga0307294_100750542	3300028810	Soil	TVITLPYGTLVGVLLYLDLRARKEQLTLERLRADLQESAT
Ga0307302_104179432	3300028814	Soil	VVAAVATVVTLPYGVLVGVLLYLDLRARKERLTLEALRADLQASAT
Ga0307296_100179461	3300028819	Soil	ITLPYGTLVGVLLYLDLRARKEQLTLERLRADLQASAT
Ga0307296_104616591	3300028819	Soil	AWLLQGIAAAVATTVTLPFGALVGVLLYLDLRARKERLHLDTLKADLQASTV
Ga0307314_102935922	3300028872	Soil	VVVAVATVITLPYGTLVGVLLYLDLRARKEQLTLERLRADLQESAT
Ga0307289_100078455	3300028875	Soil	LPYGTLVGVLLYLDLRARKEQLTLERLRADLQESAT
Ga0307289_101703362	3300028875	Soil	VAAVATVVTLPYGVLVGVLLYLDLRARKERLTLEALRADLQASAT
Ga0307286_102797384	3300028876	Soil	VVTLPYGVLVGVLLYLDLRARKESLTMEALRADLQASAA
Ga0307278_102110011	3300028878	Soil	VIAAAVGTVVTLPYGVLVGVLLYLDLRARKERLSLETLRTEL
Ga0307278_103188951	3300028878	Soil	GMSWVVQALAAAVATVITLPYGVLVGVLLYLDLRARKENLSMEALRADLRTSAA
Ga0307300_100040411	3300028880	Soil	TVVTLPYSALVGVLLYLDLRARKESLTMETLRTDLQASAA
Ga0307300_102715692	3300028880	Soil	AVATVITLPYSALVGVLLYLDLRARKENLTLETLRTDLQTSAA
Ga0307277_104244191	3300028881	Soil	AWFIQGIAAAVATTVTLPYGALVGVLLYLDLRARKEALDLDTLKADLQASTA
Ga0247827_105062971	3300028889	Soil	ATTVTLPYGALVGVLLYLDLRARKEPLDLDTLKANLQASTA
Ga0247826_102254333	3300030336	Soil	VAAAVATIVTMPYGALVGVLLYLDLRARRERLDLDTLKTDLQSSTA
Ga0247826_113833561	3300030336	Soil	AVATTVTLPYGALVGVLLYLDLRARKERLDLDTLKANLQASTA
Ga0268259_100769481	3300030499	Agave	AIAAAIATVITVPYSVLVGVLLYLDLRARKENLNLERLRTDLQTSAA
Ga0268241_101475721	3300030511	Soil	TLPYGALVGVLLYLDLRARKERLDLETLRADLQASAA
Ga0268253_100086764	3300030514	Agave	VITMPYSVLVGVLLYLDLRARKEALTLEGLRTDLQASAT
Ga0268255_101303291	3300030516	Agave	PYSALVGVLLYLDLRARKENLTLETLRTDLQASAT
Ga0308183_11226272	3300030988	Soil	AAAVATTVTLPYGALVGVLLYLDLRARKERLDLDTLKADLQASAA
Ga0308150_10337601	3300031505	Soil	IVTLPFGALVGVLLYVDLRARKERLDLDTLKTDLQATAA
Ga0307405_102111101	3300031731	Rhizosphere	FIQAVVAAVATVVTLPYGVLVGVLLYLDLRARKEQLTLERLRTDLQASAT
Ga0307405_114731251	3300031731	Rhizosphere	GWFVHAVAAAVATVVTLPYGVLVGVLLYLDLRARKERLTLEALRADLQASAA
Ga0307413_100890192	3300031824	Rhizosphere	AVATTVTLPYGALVGVLLYLDLRARKERLDLDTLKADLQASAA
Ga0307413_105675862	3300031824	Rhizosphere	TVVTLPYGVLVGVLLYLDLRARKERLTLDTLRADLQASAA
Ga0307413_110939262	3300031824	Rhizosphere	VAAAVATVVTLPYSALVGVLLYLDLRARKENLTLETLRTDLQASAA
Ga0307413_121094561	3300031824	Rhizosphere	GWFVQAIAAAVATVITLPYGVLVGVLLYLDLRARKENLTLERLRTDLQTSAA
Ga0307410_108062422	3300031852	Rhizosphere	WFVQAIAAAVATVITLPYGVLVGVLLYLDLRARKEQLTLERLRTDLQTSAA
Ga0307410_109675681	3300031852	Rhizosphere	ATVITMPYGVLVGVLLYLDLRARKENLNLERLRTDLQTSAA
Ga0307410_118137631	3300031852	Rhizosphere	VQAVAAAIATVITLPYGVLVGVLLYLDLRARKEQLTLERLRTDLQASAA
Ga0307406_101496972	3300031901	Rhizosphere	WFVQAIAAAVATVITMPYSVLVGVLLYLDLRARKEQLNLERLRTDLQASAT
Ga0307406_111756451	3300031901	Rhizosphere	AVATTVTLPYGALVGVLLYLDLRARKERLDLDTLKANLQASAA
Ga0307406_116416261	3300031901	Rhizosphere	AAVATVVTLPYGVLVGVLLYLDLRARKEQLTLERLRSDLQASAT
Ga0307407_114558501	3300031903	Rhizosphere	AAAVATVVTLPYSALVGVLLYLDLRARKESLTMETLKTDLQASAA
Ga0307412_123310612	3300031911	Rhizosphere	LPYGVLVGVLLYLDLRARKENLTLERLRTDLQTSAA
Ga0307409_1005183171	3300031995	Rhizosphere	ASLLATLVGLLLYLDLRARKERLDLDTLKANLQASTA
Ga0307409_1009569252	3300031995	Rhizosphere	PYSVLVGVLLYLDLRARKEQLNLERLRTDLQASAT
Ga0307409_1014735692	3300031995	Rhizosphere	TMPYSVLVGVLLYLDLRARKEALTLEGLRTDLQASAP
Ga0307409_1028625642	3300031995	Rhizosphere	WFVQGVAAAVATVVTLPYGVLVGVLLYLDLRARKERLSLEALRADLQASAA
Ga0307416_1008229303	3300032002	Rhizosphere	VAAAIATVITLPYGVLVGVLLYLDLRARKEQLTLERLRTDLQASAA
Ga0307416_1029682632	3300032002	Rhizosphere	TMPYSVLVGVLLYLDLRARKEQLNLERLRTDLQTSAT
Ga0307414_103499541	3300032004	Rhizosphere	PYGALVGVLLYLDLRARKEGLSLDTLRADLQASIA
Ga0307414_107358741	3300032004	Rhizosphere	AAVATVITLPYGVLVGVLLYLDLRARKENLTLERLRTDLQTSAA
Ga0307414_115896102	3300032004	Rhizosphere	VTLPYGALVGVLLYLDLRARKERLDLDALKADLQASTA
Ga0307411_101233335	3300032005	Rhizosphere	TLPYGVLVGVLLYLDLRARKEQLNLERLRSDLQASAT
Ga0307411_107513851	3300032005	Rhizosphere	TVITLPYGVLVGVLLYLDLRARKEQLNLERLRTDLQASAT
Ga0307415_1001438461	3300032126	Rhizosphere	VVAAVATTITLPYGALVGVLLYLDLRARKETLTLETLRTDLQASAA
Ga0307415_1001758803	3300032126	Rhizosphere	AVVAAVATTITLPYGALVGVLLYLDLRARKETLTVETLRADLQASAA
Ga0307415_1003517871	3300032126	Rhizosphere	VAAVATVVTLPYGVLVGVLLYLDLRARKEQLTLERLRTDLQASAT
Ga0307415_1008784351	3300032126	Rhizosphere	PYGALVGVLLYLDLRARKENLRLETLRAELQASTA
Ga0307415_1025117421	3300032126	Rhizosphere	TMPYGVLVGVLLYLDLRARKENLTLETLRTDLQASAA
Ga0268251_100747361	3300032159	Agave	VQGVVAAVATVVTMPYGVLVGVLLYLDLRARKENLTLDTLRTDLQASAA
Ga0335084_115567182	3300033004	Soil	AQMITLPFSTTVGVLLYIDLRARKEALSADRLRADLQMSA
Ga0247829_118139601	3300033550	Soil	AVAAALATMVTLPYGVLVGVLLYLDLRARREPLSPDTLTADLEASAV
Ga0334913_036922_673_792	3300034172	Sub-Biocrust Soil	VVTLPYSALVGVLLYLDLRARKENLTMETLRTDLQASAA
Ga0334913_049155_2_145	3300034172	Sub-Biocrust Soil	AVAAAVATVITLPYGVLVGVLLYLDLRARMENLTLEGLRTDLQASAT
Ga0334932_040369_265_402	3300034174	Sub-Biocrust Soil	VQAVVAAVATVVTLAYGVLLYLDLRARKEGLTPEMLRTNLQTSAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045740

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences