Metagenome / Metatranscriptome Family F045480

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045480
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	115 residues
Representative Sequence	MPKNISLALLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS
Number of Associated Samples	91
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.84 %
% of genes near scaffold ends (potentially truncated)	55.26 %
% of genes from short scaffolds (< 2000 bps)	80.92 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.316 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.763 % of family members)
Environment Ontology (ENVO)	Unclassified (67.105 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.72% β-sheet: 45.31% Coil/Unstructured: 42.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF01103	Omp85	5.92
PF03724	META	5.92
PF17185	NlpE_C	2.63
PF14023	DUF4239	2.63
PF13564	DoxX_2	1.97
PF01979	Amidohydro_1	1.97
PF08818	DUF1801	1.97
PF17200	sCache_2	1.32
PF07366	SnoaL	1.32
PF04657	DMT_YdcZ	1.32
PF04397	LytTR	0.66
PF00884	Sulfatase	0.66
PF06863	DUF1254	0.66
PF13676	TIR_2	0.66
PF07883	Cupin_2	0.66
PF04679	DNA_ligase_A_C	0.66
PF14499	DUF4437	0.66
PF06580	His_kinase	0.66
PF01594	AI-2E_transport	0.66
PF13810	DUF4185	0.66
PF01435	Peptidase_M48	0.66
PF03279	Lip_A_acyltrans	0.66
PF12680	SnoaL_2	0.66
PF13474	SnoaL_3	0.66
PF13847	Methyltransf_31	0.66
PF00873	ACR_tran	0.66
PF06906	DUF1272	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	5.92
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.97
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.97
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.97
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	1.32
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.66
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.66
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.66
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.66
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.66
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	0.66
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.66
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
All Organisms	root	All Organisms	48.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
cellular organisms	root	All Organisms → cellular organisms	48.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.61 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	2.63 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.95 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.32 %
bacterium BMS3Abin10	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	0.66 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.24 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.63 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.66 %
bacterium BMS3Abin10	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	7.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.63 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.66 %
bacterium BMS3Abin10	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	7.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.66 %
bacterium BMS3Abin10	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	7.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.66 %
bacterium BMS3Abin10	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.32 %
Variovorax sp. YR216	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	7.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.66 %
bacterium BMS3Abin10	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_15772387	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300005363\|Ga0008090_15839839	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300005542\|Ga0070732_10070977	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300005764\|Ga0066903_101343356	Not Available	1339	Open in IMG/M
3300005764\|Ga0066903_101567068	Not Available	1247	Open in IMG/M
3300005764\|Ga0066903_101690681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1205	Open in IMG/M
3300005764\|Ga0066903_102974779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	918	Open in IMG/M
3300009792\|Ga0126374_10593815	Not Available	816	Open in IMG/M
3300010043\|Ga0126380_10883854	Not Available	740	Open in IMG/M
3300010046\|Ga0126384_12302240	Not Available	520	Open in IMG/M
3300010048\|Ga0126373_11081428	Not Available	868	Open in IMG/M
3300010048\|Ga0126373_12220090	Not Available	610	Open in IMG/M
3300010358\|Ga0126370_11664901	Not Available	613	Open in IMG/M
3300010359\|Ga0126376_12721398	Not Available	544	Open in IMG/M
3300010360\|Ga0126372_10887354	Not Available	893	Open in IMG/M
3300010360\|Ga0126372_12591664	Not Available	558	Open in IMG/M
3300010361\|Ga0126378_10261047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1828	Open in IMG/M
3300010361\|Ga0126378_11242454	Not Available	842	Open in IMG/M
3300010361\|Ga0126378_11276582	Not Available	830	Open in IMG/M
3300010361\|Ga0126378_12116885	Not Available	642	Open in IMG/M
3300010366\|Ga0126379_11186975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300010366\|Ga0126379_12610282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	603	Open in IMG/M
3300010366\|Ga0126379_12804139	Not Available	583	Open in IMG/M
3300010376\|Ga0126381_100006790	All Organisms → cellular organisms → Bacteria	12696	Open in IMG/M
3300010376\|Ga0126381_100189824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2737	Open in IMG/M
3300010376\|Ga0126381_101263002	Not Available	1067	Open in IMG/M
3300010376\|Ga0126381_101325865	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300010376\|Ga0126381_102425604	Not Available	752	Open in IMG/M
3300010398\|Ga0126383_10059137	All Organisms → cellular organisms → Bacteria → Proteobacteria	3238	Open in IMG/M
3300016270\|Ga0182036_10184678	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300016270\|Ga0182036_11913560	Not Available	503	Open in IMG/M
3300016294\|Ga0182041_10037422	All Organisms → cellular organisms → Bacteria → Proteobacteria	3176	Open in IMG/M
3300016294\|Ga0182041_11067992	Not Available	732	Open in IMG/M
3300016319\|Ga0182033_10023332	All Organisms → cellular organisms → Bacteria → Proteobacteria	3821	Open in IMG/M
3300016319\|Ga0182033_10285007	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin10	1357	Open in IMG/M
3300016341\|Ga0182035_10854743	Not Available	801	Open in IMG/M
3300016341\|Ga0182035_10985019	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300016341\|Ga0182035_11908957	Not Available	539	Open in IMG/M
3300016357\|Ga0182032_10459143	Not Available	1041	Open in IMG/M
3300016357\|Ga0182032_10911264	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	747	Open in IMG/M
3300016371\|Ga0182034_10025929	All Organisms → cellular organisms → Bacteria	3585	Open in IMG/M
3300016371\|Ga0182034_11414759	Not Available	608	Open in IMG/M
3300016371\|Ga0182034_11850653	Not Available	532	Open in IMG/M
3300016387\|Ga0182040_10006484	All Organisms → cellular organisms → Bacteria	5775	Open in IMG/M
3300016387\|Ga0182040_10729522	Not Available	812	Open in IMG/M
3300016387\|Ga0182040_11480198	Not Available	576	Open in IMG/M
3300016404\|Ga0182037_10009765	All Organisms → cellular organisms → Bacteria → Proteobacteria	5506	Open in IMG/M
3300016404\|Ga0182037_10376315	Not Available	1163	Open in IMG/M
3300016404\|Ga0182037_11349104	Not Available	630	Open in IMG/M
3300016422\|Ga0182039_10285426	Not Available	1361	Open in IMG/M
3300016445\|Ga0182038_10980461	Not Available	748	Open in IMG/M
3300016445\|Ga0182038_11021057	Not Available	733	Open in IMG/M
3300017937\|Ga0187809_10024832	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300017942\|Ga0187808_10614068	Not Available	505	Open in IMG/M
3300017959\|Ga0187779_10092032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1817	Open in IMG/M
3300021361\|Ga0213872_10344881	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300021372\|Ga0213877_10112663	Not Available	836	Open in IMG/M
3300021377\|Ga0213874_10004148	All Organisms → cellular organisms → Bacteria → Proteobacteria	3278	Open in IMG/M
3300021444\|Ga0213878_10194270	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300021560\|Ga0126371_10088305	All Organisms → cellular organisms → Bacteria	3060	Open in IMG/M
3300021560\|Ga0126371_10104159	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300021560\|Ga0126371_10375123	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300021560\|Ga0126371_10437270	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300027516\|Ga0207761_1054155	Not Available	780	Open in IMG/M
3300027842\|Ga0209580_10045958	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300027874\|Ga0209465_10336414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	756	Open in IMG/M
3300031543\|Ga0318516_10040964	All Organisms → cellular organisms → Bacteria → Proteobacteria	2490	Open in IMG/M
3300031543\|Ga0318516_10603958	Not Available	626	Open in IMG/M
3300031544\|Ga0318534_10466949	Not Available	722	Open in IMG/M
3300031544\|Ga0318534_10540376	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300031545\|Ga0318541_10026518	All Organisms → cellular organisms → Bacteria → Proteobacteria	2832	Open in IMG/M
3300031546\|Ga0318538_10004257	All Organisms → cellular organisms → Bacteria → Proteobacteria	5300	Open in IMG/M
3300031546\|Ga0318538_10151443	Not Available	1226	Open in IMG/M
3300031546\|Ga0318538_10289077	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	883	Open in IMG/M
3300031561\|Ga0318528_10069435	Not Available	1812	Open in IMG/M
3300031561\|Ga0318528_10372357	Not Available	767	Open in IMG/M
3300031573\|Ga0310915_10632806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	757	Open in IMG/M
3300031668\|Ga0318542_10045602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1969	Open in IMG/M
3300031668\|Ga0318542_10047556	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300031668\|Ga0318542_10303292	Not Available	818	Open in IMG/M
3300031679\|Ga0318561_10289973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	894	Open in IMG/M
3300031679\|Ga0318561_10347639	Not Available	813	Open in IMG/M
3300031679\|Ga0318561_10376585	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031681\|Ga0318572_10088104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1734	Open in IMG/M
3300031682\|Ga0318560_10077023	Not Available	1694	Open in IMG/M
3300031682\|Ga0318560_10775122	Not Available	518	Open in IMG/M
3300031713\|Ga0318496_10553697	Not Available	636	Open in IMG/M
3300031715\|Ga0307476_10270682	Not Available	1243	Open in IMG/M
3300031718\|Ga0307474_10061639	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300031718\|Ga0307474_10066611	All Organisms → cellular organisms → Bacteria → Proteobacteria	2670	Open in IMG/M
3300031724\|Ga0318500_10370756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	709	Open in IMG/M
3300031736\|Ga0318501_10315943	Not Available	836	Open in IMG/M
3300031744\|Ga0306918_10088452	All Organisms → cellular organisms → Bacteria → Proteobacteria	2174	Open in IMG/M
3300031744\|Ga0306918_11179276	Not Available	592	Open in IMG/M
3300031754\|Ga0307475_11266104	Not Available	572	Open in IMG/M
3300031763\|Ga0318537_10117341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	988	Open in IMG/M
3300031763\|Ga0318537_10368962	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	529	Open in IMG/M
3300031770\|Ga0318521_10131663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1406	Open in IMG/M
3300031771\|Ga0318546_10869127	Not Available	635	Open in IMG/M
3300031771\|Ga0318546_11053762	Not Available	572	Open in IMG/M
3300031779\|Ga0318566_10585013	Not Available	544	Open in IMG/M
3300031781\|Ga0318547_10951681	Not Available	536	Open in IMG/M
3300031782\|Ga0318552_10061119	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300031792\|Ga0318529_10318362	Not Available	724	Open in IMG/M
3300031793\|Ga0318548_10434010	Not Available	643	Open in IMG/M
3300031821\|Ga0318567_10147551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1299	Open in IMG/M
3300031821\|Ga0318567_10254080	Not Available	987	Open in IMG/M
3300031823\|Ga0307478_10300870	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300031823\|Ga0307478_10613754	Not Available	910	Open in IMG/M
3300031831\|Ga0318564_10070717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1537	Open in IMG/M
3300031831\|Ga0318564_10326243	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031846\|Ga0318512_10057588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1750	Open in IMG/M
3300031880\|Ga0318544_10026819	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300031896\|Ga0318551_10580462	Not Available	646	Open in IMG/M
3300031896\|Ga0318551_10814480	Not Available	543	Open in IMG/M
3300031910\|Ga0306923_10215116	Not Available	2198	Open in IMG/M
3300031910\|Ga0306923_11270283	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031912\|Ga0306921_10255516	Not Available	2053	Open in IMG/M
3300031912\|Ga0306921_10674444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1190	Open in IMG/M
3300031912\|Ga0306921_10976611	Not Available	957	Open in IMG/M
3300031941\|Ga0310912_10002107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11180	Open in IMG/M
3300031941\|Ga0310912_10108343	All Organisms → cellular organisms → Bacteria → Proteobacteria	2057	Open in IMG/M
3300031941\|Ga0310912_10407784	Not Available	1058	Open in IMG/M
3300031942\|Ga0310916_10022273	All Organisms → cellular organisms → Bacteria → Proteobacteria	4504	Open in IMG/M
3300031945\|Ga0310913_11089862	Not Available	558	Open in IMG/M
3300031946\|Ga0310910_10380972	Not Available	1117	Open in IMG/M
3300031946\|Ga0310910_11565497	Not Available	504	Open in IMG/M
3300031947\|Ga0310909_10334222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1271	Open in IMG/M
3300031947\|Ga0310909_11673421	Not Available	503	Open in IMG/M
3300031954\|Ga0306926_10149984	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300031954\|Ga0306926_11845074	Not Available	685	Open in IMG/M
3300031954\|Ga0306926_12061976	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032001\|Ga0306922_10331505	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300032008\|Ga0318562_10844656	Not Available	523	Open in IMG/M
3300032039\|Ga0318559_10033894	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300032039\|Ga0318559_10445948	Not Available	604	Open in IMG/M
3300032042\|Ga0318545_10243968	Not Available	645	Open in IMG/M
3300032043\|Ga0318556_10576960	Not Available	587	Open in IMG/M
3300032043\|Ga0318556_10709551	Not Available	523	Open in IMG/M
3300032044\|Ga0318558_10612070	Not Available	544	Open in IMG/M
3300032051\|Ga0318532_10015961	All Organisms → cellular organisms → Bacteria → Proteobacteria	2377	Open in IMG/M
3300032055\|Ga0318575_10239339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	915	Open in IMG/M
3300032059\|Ga0318533_10982214	Not Available	619	Open in IMG/M
3300032063\|Ga0318504_10379047	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	673	Open in IMG/M
3300032064\|Ga0318510_10126127	Not Available	995	Open in IMG/M
3300032068\|Ga0318553_10500824	Not Available	637	Open in IMG/M
3300032076\|Ga0306924_11983281	Not Available	601	Open in IMG/M
3300032094\|Ga0318540_10261792	Not Available	835	Open in IMG/M
3300032261\|Ga0306920_100011236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12072	Open in IMG/M
3300032261\|Ga0306920_101560900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	940	Open in IMG/M
3300032893\|Ga0335069_10023112	All Organisms → cellular organisms → Bacteria → Proteobacteria	8556	Open in IMG/M
3300033289\|Ga0310914_11467872	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.68%
Host-Associated	Host-Associated	1.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.37%
Aquatic	Environmental → Aquatic	1.32%
Plants	Host-Associated → Plants	1.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.37%
Freshwater	Environmental → Aquatic → Freshwater	1.32%
Roots	Host-Associated → Plants → Roots	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.11%
Loam	Environmental → Terrestrial → Soil → Loam	3.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.32%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.32%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.32%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.32%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.32%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.66%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.66%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008090_157723872	3300005363	Tropical Rainforest Soil	SASAQAADLVLVCPITITQGTSQSTVKRRFEIDYHTHKVAEYINEGNGWTLEAMLELQSADHDRLVFAGGGIRASNIDQHTGEYRQVDGRGKARGTCETTAGDRLNKS*
Ga0008090_158398392	3300005363	Tropical Rainforest Soil	MSSRLTAVILMLLSSTAQAADLVLVCPITITQGTSQSTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKARGTCEVTAGNRLNKS*
Ga0070732_100709772	3300005542	Surface Soil	MSSRLTAAMLIVLSTSAQAADLVLVCPITLTQGASHHPVKRRFEIDYGTHKVAEYIDQGNGWTLEAMLELQVADHDRLVFAGDGIKASNIDQHTWQYRQVDGRGKARGTCEKTAGNRLNKF*
Ga0066903_1013433562	3300005764	Tropical Forest Soil	MPRNISLALLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADNDKLVFAGGGIRASNLDQHTGAYRQVDDRGEARGTCERTAGRRLNKS*
Ga0066903_1015670683	3300005764	Tropical Forest Soil	MPRNISLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0066903_1016906811	3300005764	Tropical Forest Soil	ACAGYMNNEQATDTVLVCPITITQGTSEITAKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTGGRRLQKS*
Ga0066903_1029747792	3300005764	Tropical Forest Soil	MPRNMSLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNLDQHTGAYRQVDDRGEARGTCERTAGRRLNKS*
Ga0126374_105938151	3300009792	Tropical Forest Soil	MPKNISLALLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNLDQHTGAYRQVDDRGEANGTCERTGGRRLQKS*
Ga0126380_108838541	3300010043	Tropical Forest Soil	MNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGAASGTCERTAGRRLNKS*
Ga0126384_123022401	3300010046	Tropical Forest Soil	ITQGTSEITVKRRFEINYDTHRVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0126373_110814281	3300010048	Tropical Forest Soil	LLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFDINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNLDQHTGAYRQVDDRGAASGTCERTAGRRLNKS
Ga0126373_122200901	3300010048	Tropical Forest Soil	VRRLYEQRTSDGYVLVCPITIAQGTSEITVKRRFEINYDTHQVAEYIDQGSGWTPEATLELQVADNDRLVFAGGSIQASNVDQHTGEYRQVDDRGKASGTCEKTAGRRLQKS*
Ga0126370_116649011	3300010358	Tropical Forest Soil	ALLSIAITACAGYMNREQATDTVLVCPITITQGTSASSVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADNDKLVFAGGGIRASNLNQHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0126376_127213981	3300010359	Tropical Forest Soil	MPKNISLALLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNFDLHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0126372_108873541	3300010360	Tropical Forest Soil	QATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNLDQHTGAYRQVDDRGEANGTCERTGGSRLQKS*
Ga0126372_125916641	3300010360	Tropical Forest Soil	STRRGKMPKNISLALLSVTIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADNDKLVFAGGGIRASNLNQHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0126378_102610472	3300010361	Tropical Forest Soil	MSSRLTAVILVLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKAHGTCEITAGNRLNKS*
Ga0126378_112424541	3300010361	Tropical Forest Soil	QGTSEITAKRRFEVNYDTHKVAEYIDQGSGWTPEATLVLQVADNDILVFAGGGIRASNLDQHTGAYRQVDDRGEARGTCERTAGRRLNKS*
Ga0126378_112765821	3300010361	Tropical Forest Soil	TFAGCMLRCGRTESTRRGKMRKIISLAPLSIAITACAGYLNNEQATDTVLVCPITITQGASEITAKRRYEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNFDQHTGANRQVDDRGQASGTCERTGGRRLQKS*
Ga0126378_121168851	3300010361	Tropical Forest Soil	MSLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNLDQHTGAYRQVDDRGEARGTCERTAGRRLNKS*
Ga0126379_111869752	3300010366	Tropical Forest Soil	TVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFACGGIQASTLDQHTGAYRQVDDRGKASGTCEKTSGRRLHKL*
Ga0126379_126102822	3300010366	Tropical Forest Soil	MSLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCE
Ga0126379_128041391	3300010366	Tropical Forest Soil	RGLYAALRPHRVHQEGKMPKNISLALLSIAIAACAGYMNNEQATDIVFVCPITITQGTSEITVKRRYEVNYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTAGRRLQKF*
Ga0126381_1000067904	3300010376	Tropical Forest Soil	MRKIISLAPLSIAITACAGYVNNEQATDTVLVCPITITQGASEITAKRRYEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGQASGTCERTGGRRLQKS*
Ga0126381_1001898244	3300010376	Tropical Forest Soil	MPRNISLALLSIAIAACAGYMNNEHATDTVLVCPITITQGTAETTVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQAADHDRLVFAGGGIRASYLDQHTGAYRQVDGRGEATGTCEKTAGRRLQKS*
Ga0126381_1012630022	3300010376	Tropical Forest Soil	MPKNISLALLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0126381_1013258651	3300010376	Tropical Forest Soil	MLPSGHTKSTRRGKMPKNISLALLSIAVAACAGYRNNEQATDTVLVCPITITQGTSESTVKRRFEINYDTHKVAEYIDQGGGWIPEATLELQVADHDRLVFAGGGIRASNIDQHTGAYRQVDDRGEASGTCEKTAGRRLHEF*
Ga0126381_1024256041	3300010376	Tropical Forest Soil	MSSRLTAVILILVSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKARGTCEVTAGNRLNKS*
Ga0126383_100591375	3300010398	Tropical Forest Soil	MSLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS*
Ga0182036_101846781	3300016270	Soil	MQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0182036_119135601	3300016270	Soil	TQGTSQSNVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKALGTCEVTAGNRLNKS
Ga0182041_100374223	3300016294	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKALGTCEVTAGNRLNK
Ga0182041_110679922	3300016294	Soil	MQKNISLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNKS
Ga0182033_100233321	3300016319	Soil	TVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLQKS
Ga0182033_102850072	3300016319	Soil	MQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCERTAG
Ga0182035_108547431	3300016341	Soil	AAPQLHREGWRARLVSAGLSRGLYAALQPHQVHQEGKMPKNISLALLSIAITACAGYLNKENATDLVLVCPITITQGTSEITAKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNVDQHTGEYRQVDDRGKASGTCEQTAGRRLQKS
Ga0182035_109850191	3300016341	Soil	LILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKASGTCEVTAGNRLNKS
Ga0182035_119089571	3300016341	Soil	NEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVTEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCERTAGTRLPKF
Ga0182032_104591431	3300016357	Soil	MQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRL
Ga0182032_109112641	3300016357	Soil	QGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLQKS
Ga0182034_100259291	3300016371	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGK
Ga0182034_114147592	3300016371	Soil	MQKSISLALLSIAITACAGYVNNEQATDTVLVCPITITQGTSEIAVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASYIDQHTGAYRQVDDRGKASGTCERTAGRRLNKF
Ga0182034_118506531	3300016371	Soil	ITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0182040_100064841	3300016387	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0182040_107295221	3300016387	Soil	MQKNISLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0182040_114801981	3300016387	Soil	QEGKMQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEVTVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0182037_100097652	3300016404	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0182037_103763152	3300016404	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNKS
Ga0182037_113491041	3300016404	Soil	MPKIISLALLSIAIAACAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGK
Ga0182039_102854262	3300016422	Soil	MQKNIGLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNKS
Ga0182038_109804611	3300016445	Soil	MPKNISLALLSLAITACAGYMNNEKATDTVLVCPITITQGTSEITVKRRFEINYDTHKVTEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGKRLHKV
Ga0182038_110210571	3300016445	Soil	MQKNISPALLSIAITACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERT
Ga0187809_100248323	3300017937	Freshwater Sediment	MPKNISLALLSIAITACAGYMNNEQATDVVLVCPITITQGTAQITVKRRFEINYDTHKVAESIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLNKS
Ga0187808_106140681	3300017942	Freshwater Sediment	MPKNISLALLSIAFSACAGYMNNEQATDTVLVCPITITQGASEITVKRRFEINYDTHKVAESIDQGSGWTPEATLDLQVADHDRLVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLNKS
Ga0187779_100920322	3300017959	Tropical Peatland	MRRLYEQRTSDGYVLVCPVTITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNLDQHTGAYRQVDDRGEARGTCERTAGRRLQKF
Ga0213872_103448812	3300021361	Rhizosphere	PKNISLALLFIAITACAGYLNNEQATDTVLVCSMTITQGTSEIPMKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRMVFAGGDVEASNFDQHTGAYRQVDGRGKASGTCERTAGRRLNKS
Ga0213877_101126632	3300021372	Bulk Soil	MPKNISLALLFIAITACAGYLNNEQATDTVLVCSMTITQGTSEIPMKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRMVFAGGDVEASNFDQHTGAYRQVDGRGKASGTCERTAGRRLNKS
Ga0213874_100041482	3300021377	Plant Roots	MRKNISLAILCIAITACAGYLNKDEATDVVLVCPVTIAQGTSEISVKRRFEINYDAHKVAEYIDQGSGWTPEATLELQVADHDRMVFAGDGIRASNFNQHTGEYRQVDDRGEARGTCERTSGRRLNKS
Ga0213878_101942701	3300021444	Bulk Soil	SMTITQGTSEIPMKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRMVFAGGDVEASNFDQHTGAYRQVDGRGKASGTCERTAGRRLNKS
Ga0126371_100883055	3300021560	Tropical Forest Soil	MPKNISLALLSVTIAACAGYMNNEQATDTVLVCPITITQGTSEITAKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGQASGTCERTGGRRLQKS
Ga0126371_101041594	3300021560	Tropical Forest Soil	MPRNISLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS
Ga0126371_103751231	3300021560	Tropical Forest Soil	SETTVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADNDKLVFAGGGIRASNLDQHTGAYRQVDDRGEARGTCERTAGRRLNKS
Ga0126371_104372701	3300021560	Tropical Forest Soil	MSSRLTAVILVLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKAHGTCEITAGNRLNK
Ga0207761_10541552	3300027516	Tropical Forest Soil	MPKNISLALVSIAVAACAGYMNKEQATDLVLVCPMTITQGTSEITVKRRFEVNYDTHKVAEYIDQGSGWTPEATLELQVADNDRLVFAGGGIRASNLDQHTGAYSQVDDRGKASGTCERTAGRRLQKN
Ga0209580_100459582	3300027842	Surface Soil	MSSRLTAAMLIVLSTSAQAADLVLVCPITLTQGASHHPVKRRFEIDYGTHKVAEYIDQGNGWTLEAMLELQVADHDRLVFAGDGIKASNIDQHTWQYRQVDGRGKARGTCEKTAGNRLNK
Ga0209465_103364141	3300027874	Tropical Forest Soil	MPRNMSLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELRVADHDRLVFAGGGIRASNFDQHTGAYRQVDDRGEASGTCERTAGRRLNKS
Ga0318516_100409641	3300031543	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGN
Ga0318516_106039581	3300031543	Soil	CAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0318534_104669492	3300031544	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0318534_105403761	3300031544	Soil	ITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGKRLHKV
Ga0318541_100265182	3300031545	Soil	MQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0318538_100042571	3300031546	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKALGTCEVTAGNRLNK
Ga0318538_101514431	3300031546	Soil	MPKIISLALLSIAIAACAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGRRLHKV
Ga0318538_102890772	3300031546	Soil	MPRNIGLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLQKS
Ga0318528_100694352	3300031561	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0318528_103723571	3300031561	Soil	MPKNISLALLSVAITACAGYMNEVQATDTVLVCPITITQGTSEIAVKRRFEINYDTHKVAEYIDQGNGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGRRLHK
Ga0310915_106328061	3300031573	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKASGTCEVTAGNRLNK
Ga0318542_100456021	3300031668	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYR
Ga0318542_100475561	3300031668	Soil	PITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNKS
Ga0318542_103032921	3300031668	Soil	VCAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGRRLHKV
Ga0318561_102899733	3300031679	Soil	EQATDTVLVCPVTITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0318561_103476391	3300031679	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAG
Ga0318561_103765851	3300031679	Soil	SQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNKS
Ga0318572_100881041	3300031681	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHG
Ga0318560_100770233	3300031682	Soil	MPKIISLALLSIAIAACAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEKTSGKRLHKV
Ga0318560_107751221	3300031682	Soil	GYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLNRS
Ga0318496_105536972	3300031713	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0307476_102706822	3300031715	Hardwood Forest Soil	MSSRLTAAMLIVLSTSAQAADLVLVCPITLTQGASHHPVKRRFEIDYETHKVAEYIDQGNGWTLEAMLELQVADHDRLVFAGDGIKASNIDQHTWQYRQVDGRGKARGTCEKTAGNRLNK
Ga0307474_100616391	3300031718	Hardwood Forest Soil	MSSRLTAAMLIVLSTSAQAADLVLVCPITLTQGASHHAVKRRFEIDYDTHKVAEYIDQGNGWTLEAMLELQVADHDRLVFAGDGIKASNIDQHTWQYRQVDGRGKARGTCEKTAGNRLNK
Ga0307474_100666114	3300031718	Hardwood Forest Soil	MTRNISVAVLSTAFAACAGGYINSTGDKAADLVLVCPITITQGTSQVTVKRRFEVDYDTHKVAEYIDQGNGWTQEATLELRVADHDRLVFAGGGIQGSNIDQHTGEYRQVDDRGTARGTCEKTAGKRLYKS
Ga0318500_103707562	3300031724	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKASGTCEVT
Ga0318501_103159432	3300031736	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0306918_100884522	3300031744	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0306918_111792761	3300031744	Soil	MQKNIGLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEAS
Ga0307475_112661041	3300031754	Hardwood Forest Soil	MSSRLTAAMLIVLSTSAQAADLVLVCPITLTQGASHHAVKRRFEIDYDTHKVAEYIDQGNGWTLEAMLELQVADHDRLVFAGDGIKASNIDQHTWQYRQVDGRGKARGTCEKTAGNRLN
Ga0318537_101173412	3300031763	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQ
Ga0318537_103689621	3300031763	Soil	IGLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLQKS
Ga0318521_101316631	3300031770	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVD
Ga0318546_108691272	3300031771	Soil	MPKIISLALLSIAIAACAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKAS
Ga0318546_110537621	3300031771	Soil	MPRNIGLALLSIAIAACAGYMNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTGGRRLQKS
Ga0318566_105850131	3300031779	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCE
Ga0318547_109516811	3300031781	Soil	SMSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKALGTCEVTAGNRLNKS
Ga0318552_100611191	3300031782	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0318529_103183621	3300031792	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNK
Ga0318548_104340101	3300031793	Soil	TDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0318567_101475511	3300031821	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKASGTCEVTAGNRLNK
Ga0318567_102540801	3300031821	Soil	MPKIISLALLSIAIAACAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGK
Ga0307478_103008702	3300031823	Hardwood Forest Soil	QVTVKRRYEIDVATRKVAESIDQGNGWTPEATLVLQEANRDRLVFAGGGIDASNIDSHTGEYRQVDGRGNASGTCEKIAGKSLNKF
Ga0307478_106137541	3300031823	Hardwood Forest Soil	VLSTAFAACAGGYINSTGDKAADLVLVCPITITQGTSQVTVKRRFEVDYDTHKVAEYIDQGNGWTQEATLELRVADHDRLVFAGGGIQGSNIDQHTGEYRQVDDRGTARGTCEKTAGKRLYKS
Ga0318564_100707172	3300031831	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQ
Ga0318564_103262432	3300031831	Soil	RYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNKS
Ga0318512_100575881	3300031846	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKARGTCEVTAGNRLNK
Ga0318544_100268191	3300031880	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0318551_105804621	3300031896	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDDRGKASGTCERTAGRRLQK
Ga0318551_108144801	3300031896	Soil	MPKNISLALLSIAITACAGYLNKENATDLVLVCPITITQGTSEITAKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIRASNVDQHTGEYRQVDDRGKASGTCEQ
Ga0306923_102151161	3300031910	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVD
Ga0306923_112702832	3300031910	Soil	NEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0306921_102555162	3300031912	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRG
Ga0306921_106744441	3300031912	Soil	CPITITQGTSEISAKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADNDKLVFAGGGIRASNLDQHTGAYRQVDDRGEASGTCERTAGRRLNKS
Ga0306921_109766112	3300031912	Soil	MPKNISLALLSLAITACAGYMNNEKATDTVLVCPITITQGTSEITVKRRFEINYDTHKVTEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCERTAGTRLPKF
Ga0310912_100021071	3300031941	Soil	DLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKASGTCEVTAGNRLNKS
Ga0310912_101083431	3300031941	Soil	CPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0310912_104077841	3300031941	Soil	MQKNISLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0310916_100222732	3300031942	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKASGTCEVTAGNRLNK
Ga0310913_110898621	3300031945	Soil	MQKNIGLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0310910_103809721	3300031946	Soil	MQKNIGLALLSIAITACAGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNKS
Ga0310910_115654972	3300031946	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRG
Ga0310909_103342222	3300031947	Soil	PVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWIPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0310909_116734211	3300031947	Soil	EKATDTVLVCPITITQGTSEITVKRRFEINYDTHKVTEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCERTAGTRLPKF
Ga0306926_101499844	3300031954	Soil	MQKNISLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNKS
Ga0306926_118450741	3300031954	Soil	MPKNISLALLSLAITACAGYMNNEKATDTVLVCPITITQGTSEIAVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADNDQLVFAGGGIRASHLNQHTGEYRQVDDRGQASGTCERTAGRRLNKS
Ga0306926_120619761	3300031954	Soil	SQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKALGTCEVTAGNRLNKS
Ga0306922_103315055	3300032001	Soil	ITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0318562_108446562	3300032008	Soil	VLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0318559_100338941	3300032039	Soil	MQKNISLALLSIAITACAGYVNNEQATDTVLVCPITITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDDRGKASGTCEKTSGKRLHKV
Ga0318559_104459482	3300032039	Soil	QGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNKS
Ga0318545_102439681	3300032042	Soil	GYMNNEQATDTVLLCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGNGWTPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGTRLNKF
Ga0318556_105769602	3300032043	Soil	TVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0318556_107095512	3300032043	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKAL
Ga0318558_106120701	3300032044	Soil	QGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDRGEASGTCERTAGRRLNRS
Ga0318532_100159613	3300032051	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVR
Ga0318575_102393392	3300032055	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQTADHDRLVFAGGDVRASNINQHT
Ga0318533_109822142	3300032059	Soil	AGYVNNERATDTVLVCPVTITQGSSETTAKRRFEINYDTHKVTEYIDQGSGWVPEATLELQVADNDKMVFAGGGIRASNFDQHTGAYRQVDGRGEASGTCERTAGRRLNKS
Ga0318504_103790471	3300032063	Soil	MQKNIGLALLSIAITACAGYVNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDEGSGWTPEATLELQVADHDRFVFAGGGIRASNIDQHTGEYRQVDDRGKASGTCERTAGRRLQKS
Ga0318510_101261273	3300032064	Soil	MPKIISLALLSIAIAACAGGYTGNEQATDTVLVCPITITQGTSEITVKRRFEINYETHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGGGIQASNIDQHTGAYRQVDDRGKASGTCEK
Ga0318553_105008241	3300032068	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQSNVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQVADHDRLVFAGGGIQASNIDQHTGEYR
Ga0306924_119832811	3300032076	Soil	MQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGIRASNIDQHTGAYRQVDDR
Ga0318540_102617921	3300032094	Soil	MSSRLTAAILILLSASAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDTGNGWTLEATLELQTADHDRLVFAGGDLRASNINQHTGEYRQVDGRGKAHGTCEVTTGNRLNK
Ga0306920_1000112365	3300032261	Soil	MQKNISPALLSIAITACAGYLNNEQATDTVLVCPITITQGTSEITVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADHDRLVFAGSGVRASNVDQHTGAYRQVDDRGQASGTCERTAGRRLNRS
Ga0306920_1015609001	3300032261	Soil	MSSRLTAVILMLLSATAQAADLVLVCPITITQGTSQFTVKRRYEIDYHTHKVAEYIDEGNGWTLEATLELQSADHDRLVFAGGDVRASNINQHTGEYRQVDGRGKASGTCEVTAG
Ga0335069_1002311210	3300032893	Soil	MNDDKATDIVFVCSITITQGTSEINAKRRFEINYHNYKVAEYIDLGSGWTPEATLELQAADHDRLVFAGGSVRGSNLDQQTGAYRQFDERGEASGTCERTAGRRLNKI
Ga0310914_114678722	3300033289	Soil	ITQGTSEIAVKRRFEINYDTHKVAEYIDQGSGWTPEATLELQVADNDQLVFAGGGIRASHLNQHTGEYRQVDDRGQASGTCERTAGRRLNKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045480

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences