Metagenome / Metatranscriptome Family F045278

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045278
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	63 residues
Representative Sequence	ADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSR
Number of Associated Samples	137
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.66 %
% of genes near scaffold ends (potentially truncated)	96.73 %
% of genes from short scaffolds (< 2000 bps)	93.46 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.386 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.072 % of family members)
Environment Ontology (ENVO)	Unclassified (25.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.712 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.71% β-sheet: 25.00% Coil/Unstructured: 64.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF00753	Lactamase_B	6.54
PF00072	Response_reg	1.31
PF07238	PilZ	1.31
PF01391	Collagen	1.31
PF03466	LysR_substrate	0.65
PF10518	TAT_signal	0.65
PF03450	CO_deh_flav_C	0.65
PF08447	PAS_3	0.65
PF04014	MazE_antitoxin	0.65
PF07883	Cupin_2	0.65
PF12840	HTH_20	0.65
PF04519	Bactofilin	0.65
PF10282	Lactonase	0.65
PF00990	GGDEF	0.65
PF04909	Amidohydro_2	0.65
PF01833	TIG	0.65
PF00801	PKD	0.65
PF00589	Phage_integrase	0.65
PF08327	AHSA1	0.65
PF14559	TPR_19	0.65
PF00596	Aldolase_II	0.65
PF00156	Pribosyltran	0.65
PF00080	Sod_Cu	0.65
PF07681	DoxX	0.65
PF04055	Radical_SAM	0.65
PF00196	GerE	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.65
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.65
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.65
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Unclassified	root	N/A	2.61 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.92 %
Unclassified	root	N/A	2.61 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Unclassified	root	N/A	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.65 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Unclassified	root	N/A	2.61 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	1.96 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Unclassified	root	N/A	2.61 %
Pelagibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium	1.96 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.65 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.65 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Unclassified	root	N/A	2.61 %
Pelagibacterium halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1.96 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.65 %
Acidobacteriaceae bacterium KBS 146	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146	0.65 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Unclassified	root	N/A	2.61 %
Pelagibacterium halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1.96 %
Caulobacter sp. S45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	0.65 %
Sphingomonas sp. Ant H11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. Ant H11	0.65 %
Acidobacteriaceae bacterium KBS 146	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146	0.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004100\|Ga0058904_1433298	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300004479\|Ga0062595_100818687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300004780\|Ga0062378_10015818	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300005093\|Ga0062594_102401758	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005167\|Ga0066672_10587292	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005171\|Ga0066677_10848542	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005174\|Ga0066680_10355382	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005181\|Ga0066678_10688879	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005186\|Ga0066676_10488143	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300005328\|Ga0070676_10884206	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300005332\|Ga0066388_104612980	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005332\|Ga0066388_106506943	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005338\|Ga0068868_101232630	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300005445\|Ga0070708_100996049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300005447\|Ga0066689_10096109	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300005450\|Ga0066682_10630379	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005542\|Ga0070732_10304662	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300005545\|Ga0070695_100143903	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300005549\|Ga0070704_100183415	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300005568\|Ga0066703_10137551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1461	Open in IMG/M
3300005586\|Ga0066691_10154030	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005586\|Ga0066691_10778820	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005598\|Ga0066706_10167122	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300005921\|Ga0070766_10048394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146	2380	Open in IMG/M
3300006031\|Ga0066651_10125718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1321	Open in IMG/M
3300006032\|Ga0066696_10422536	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300006050\|Ga0075028_101017041	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006086\|Ga0075019_10552916	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300006174\|Ga0075014_100442928	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300006176\|Ga0070765_101822028	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006196\|Ga0075422_10221470	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300006797\|Ga0066659_11869105	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006853\|Ga0075420_101541199	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006871\|Ga0075434_100154922	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300006881\|Ga0068865_100651503	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006904\|Ga0075424_101758883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300007258\|Ga0099793_10526560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300009088\|Ga0099830_10810412	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300009088\|Ga0099830_11832910	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300009094\|Ga0111539_12453508	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300009137\|Ga0066709_101060476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300009147\|Ga0114129_11802470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300009522\|Ga0116218_1548424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010037\|Ga0126304_10493172	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300010045\|Ga0126311_11782485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010109\|Ga0127497_1124336	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010303\|Ga0134082_10170577	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300010323\|Ga0134086_10480506	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010329\|Ga0134111_10029080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1918	Open in IMG/M
3300010329\|Ga0134111_10529814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010359\|Ga0126376_10817789	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300010360\|Ga0126372_10348644	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300010375\|Ga0105239_13083610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010398\|Ga0126383_10229320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	1806	Open in IMG/M
3300010398\|Ga0126383_12193951	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300011120\|Ga0150983_14456890	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300011431\|Ga0137438_1253782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012201\|Ga0137365_11040088	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012202\|Ga0137363_11787283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012206\|Ga0137380_10880667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300012211\|Ga0137377_10016135	All Organisms → cellular organisms → Bacteria	6479	Open in IMG/M
3300012228\|Ga0137459_1092028	Not Available	878	Open in IMG/M
3300012356\|Ga0137371_10380380	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012356\|Ga0137371_11397233	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012359\|Ga0137385_11035801	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012362\|Ga0137361_10010440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6608	Open in IMG/M
3300012380\|Ga0134047_1152448	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012406\|Ga0134053_1216624	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012918\|Ga0137396_10436374	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012922\|Ga0137394_10754483	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	817	Open in IMG/M
3300012944\|Ga0137410_10093966	All Organisms → cellular organisms → Bacteria → Acidobacteria	2212	Open in IMG/M
3300012944\|Ga0137410_11977525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300014162\|Ga0181538_10450254	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300014301\|Ga0075323_1163346	Not Available	519	Open in IMG/M
3300014326\|Ga0157380_11101242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300014501\|Ga0182024_11436783	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300015372\|Ga0132256_102678675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300015373\|Ga0132257_102288921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300015373\|Ga0132257_103722791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300015374\|Ga0132255_100931009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300017654\|Ga0134069_1198542	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300017656\|Ga0134112_10054030	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300017955\|Ga0187817_10102734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1799	Open in IMG/M
3300017994\|Ga0187822_10281098	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017994\|Ga0187822_10311479	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300017997\|Ga0184610_1263285	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300018079\|Ga0184627_10062332	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300018079\|Ga0184627_10512334	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018082\|Ga0184639_10353355	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300018082\|Ga0184639_10495358	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018422\|Ga0190265_11430233	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300018431\|Ga0066655_10513017	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300018476\|Ga0190274_13220005	Not Available	549	Open in IMG/M
3300020579\|Ga0210407_10665864	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300020581\|Ga0210399_10233420	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300021170\|Ga0210400_11589389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300021171\|Ga0210405_10236657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300021171\|Ga0210405_10898713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300021171\|Ga0210405_11094548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300021171\|Ga0210405_11369978	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300021403\|Ga0210397_11482249	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300021404\|Ga0210389_10659646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300021407\|Ga0210383_11733124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300021477\|Ga0210398_10892319	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300021478\|Ga0210402_11857762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300021479\|Ga0210410_11671738	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300021559\|Ga0210409_11221743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300022504\|Ga0242642_1038950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300022531\|Ga0242660_1036697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300022726\|Ga0242654_10330199	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300024271\|Ga0224564_1022133	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300024330\|Ga0137417_1434604	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300025160\|Ga0209109_10324414	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300025165\|Ga0209108_10174009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300025324\|Ga0209640_10091675	All Organisms → cellular organisms → Bacteria → Acidobacteria	2620	Open in IMG/M
3300025920\|Ga0207649_11226925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300025938\|Ga0207704_10990350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300025945\|Ga0207679_11991272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300026023\|Ga0207677_11105329	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300026089\|Ga0207648_11063258	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300026323\|Ga0209472_1177636	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300026326\|Ga0209801_1309701	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300026331\|Ga0209267_1127302	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300026342\|Ga0209057_1210570	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300026528\|Ga0209378_1292228	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027576\|Ga0209003_1028337	All Organisms → cellular organisms → Bacteria → Acidobacteria	941	Open in IMG/M
3300027716\|Ga0209682_10168305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300027725\|Ga0209178_1101795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300027826\|Ga0209060_10506751	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300027862\|Ga0209701_10394211	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300027869\|Ga0209579_10174760	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300027882\|Ga0209590_10258991	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300027882\|Ga0209590_10926230	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300027903\|Ga0209488_10031454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. Ant H11	3868	Open in IMG/M
3300028906\|Ga0308309_10204311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1630	Open in IMG/M
3300029999\|Ga0311339_11596811	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031198\|Ga0307500_10316649	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031236\|Ga0302324_102329301	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031548\|Ga0307408_100084976	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300031663\|Ga0307484_117086	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300031708\|Ga0310686_108611962	All Organisms → cellular organisms → Bacteria → Proteobacteria	1491	Open in IMG/M
3300031708\|Ga0310686_110059562	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031715\|Ga0307476_10811005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300031718\|Ga0307474_10548522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300031720\|Ga0307469_10299959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300031754\|Ga0307475_10411217	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300031911\|Ga0307412_10237620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300031940\|Ga0310901_10348655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300031962\|Ga0307479_10190893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	2017	Open in IMG/M
3300032163\|Ga0315281_10639627	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300032174\|Ga0307470_10756837	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300032770\|Ga0335085_11687602	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.62%
Host-Associated	Host-Associated	14.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.51%
Plants	Host-Associated → Plants	14.38%
Aquatic	Environmental → Aquatic	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.15%
Sediment	Environmental → Aquatic → Sediment	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.23%
Freshwater	Environmental → Aquatic → Freshwater	4.58%
Peat	Environmental → Terrestrial → Peat	1.31%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.75%
Loam	Environmental → Terrestrial → Soil → Loam	8.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.31%
Lake	Environmental → Aquatic → Freshwater → Lake	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.31%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058904_14332981	3300004100	Forest Soil	ADYSDYADHGEILTDIKSPGHMVQKQGGSTVLDIQIKSWDANNPYLVFPIPRNVKMATQQSSKVAER*
Ga0062595_1008186872	3300004479	Soil	SEAEYSGYADHAEVLTDVKTPAHMVFKRGGRTVADITVKTWETNNPYLVFPVPPNVKATPATTSR*
Ga0062378_100158182	3300004780	Wetland Sediment	VLTDIKTPGHIVRQQAGRTVLDITVKNWETNNLYLVFPVPANVKAATPASAR*
Ga0062594_1024017581	3300005093	Soil	NLATETTYSDYADRAEVLTDIQTPGHIVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR*
Ga0066672_105872921	3300005167	Soil	ILTDIKSPGHIVEKRAGVTVLDIQIKMWDANNPYLVFPVPPSVKGGGTQQSVNRTQ*
Ga0066677_108485422	3300005171	Soil	EVRPGNAALANLASETEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTVANSR*
Ga0066680_103553821	3300005174	Soil	KTDNAALANLAFETEYSGYADHGEILTDIQSPGRIVIKQGGSTVQDIQIKAWEANNPYVVFPVPGNVKTAAGNSR*
Ga0066678_106888791	3300005181	Soil	SLAFETEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKAWESNNPYLIFPVPPNVKTVANSR*
Ga0066676_104881432	3300005186	Soil	RPDNASLANLALETEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTAANSR*
Ga0070676_108842062	3300005328	Miscanthus Rhizosphere	ASLATETEYSDYADRGEVLTDIKSPGHIVRRQGGRPVLDIRVKMWEANNLYLVFPVPQNVKTAAAASSR*
Ga0066388_1046129802	3300005332	Tropical Forest Soil	ETRPDNPARANLATQTEYSNYADHGEVLTDIKSPGHIVRKQGGRTVLDIEVKNWEANNHYIVFPVPPNVKTAATTSR*
Ga0066388_1065069432	3300005332	Tropical Forest Soil	HGEVLTDIKSPGRIVQKQGGRPVLDLQIKTWEANNPYLVFPVPGNVKTASASR*
Ga0068868_1012326301	3300005338	Miscanthus Rhizosphere	EVLTDIKSPGHIVRRQGGRPVLDIRVKMWEANNLYLVFPVPQNVKTAAAASSR*
Ga0070708_1009960492	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DNLARANLATETEYSNYADHAEVLTDIKTPGHIVRKQGGRTMFDLQVKTWETNNPYLVFPVPPNVKSASPPNSR*
Ga0066689_100961093	3300005447	Soil	ETRPDNPALANMATETEYSGYADHGEVLTDIKSPGRIVKKQGGRPILDIQVSMWEANNPYLVFPVPPNVKTAASR*
Ga0066682_106303792	3300005450	Soil	NLVAEYSDYADHGEILTDIQSPGHIVQKQGGRTTLDIQIKTWEANNPYLVFPVPPNVTGRK*
Ga0070732_103046622	3300005542	Surface Soil	ADHGEILTDIKSPGHIVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQESSKVAER*
Ga0070695_1001439034	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TYSDYADRAEVLTDIQTPGHIVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR*
Ga0070704_1001834151	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ALVTQTDYANYADRAEILTDIKTPGRIVRRQGGRTVLDIEVKAWETNNPYLVFPVPPSARAAAPNSR*
Ga0066703_101375511	3300005568	Soil	ADHGEILTDIKSPGRIVQKQGGSPVLDIQIKVWDANNPYLVFPIPGNVKNATAPGQSASRQP*
Ga0066691_101540301	3300005586	Soil	EYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTVANSR
Ga0066691_107788201	3300005586	Soil	KVETRPDNPALANMATETEYSDYADHGEILTDIKSPGHIVQKQGGRPLLDIQVKLWEANNPYLVFPVPPNVKTNSR*
Ga0066706_101671221	3300005598	Soil	LAFEIEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKAAGADSR*
Ga0070766_100483945	3300005921	Soil	IATDVKSPGHIVRKQGGHPVLDIQVKMLDANNPYLVFPVPENVKKAAAH*
Ga0066651_101257182	3300006031	Soil	TLDAKNLVTKVEARPENAALDTLAFEIEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKTAAGNSR*
Ga0066696_104225362	3300006032	Soil	YSGYADHGEILTDIRSPGRIVRKQGGRTVLDIAVKMWEANNPYLVFPVPGNVKTAAGNSH
Ga0075028_1010170412	3300006050	Watersheds	YADHGEIATDVKSPGHIVRKQGGHPVLDIRVKMLDANNPYLVFPVPENVKKAAAH*
Ga0075019_105529161	3300006086	Watersheds	ADHGEIATDVKSPGHIVRKQGGHPVLDLQVKTLDANNPYLVFPVPENVKKAAAH*
Ga0075014_1004429282	3300006174	Watersheds	YADHGEIATDVKSPGHIVRKQGGHPVLDIQVKMWDANNPYLVFPVPENVKKAAAN*
Ga0070765_1018220281	3300006176	Soil	SDYADHGELLTDIKSPGHIVEKQAGRPVLDIRVKMVDANNPYLVFPVPPNVKAAAATGK*
Ga0075422_102214701	3300006196	Populus Rhizosphere	LVTQTDYANYADRAEILTDIKTPGRIVRRQGGRTVLDIEVKTWETNNPYLVFPVPPNVKAPAAANPR*
Ga0066659_118691051	3300006797	Soil	NMETQYFDYADHGEVLTDIKSPGHIVQKQGGRTILDIRIKTWEANNPYLVFPVPKNVTAAR*
Ga0075420_1015411992	3300006853	Populus Rhizosphere	LVTGVETRSETPALVTQTDYANYADRAEILTDIKTPGRIVRRQGGRTVLDIEVKTWETNNPYLVFPVPPNVKAPAAANPR*
Ga0075434_1001549221	3300006871	Populus Rhizosphere	AEYSGYADHGEILSDIQSPGHIVQKQGGRTTLDMQIKAWEANNPYLVFPVPKNVTGSK*
Ga0068865_1006515033	3300006881	Miscanthus Rhizosphere	ANLALQTEYSDYADHAEVLTDIKTPGHIVGKRDGRTVFDLTVKSWETNNPYLVFPVPPNVKAAATTSPTSR*
Ga0075424_1017588832	3300006904	Populus Rhizosphere	TRPDNPSLVNLAIEAEYSDYADHGEILTDIQSPGRIVQRQGGRTILDIQIKTWEANNPYLIFPVPQNVSGQK*
Ga0099793_105265601	3300007258	Vadose Zone Soil	ADRGEVLTDIKSPGHIVRRQGGRPLLDIRVKMWEANNPYLVFPVPPNLKTGA*
Ga0099830_108104121	3300009088	Vadose Zone Soil	YADHGEIPTDVKSPGHIVQKQGGHTLLDIQVKKVDANNPYLVFPVPENVKKAAAH*
Ga0099830_118329101	3300009088	Vadose Zone Soil	SKNFITKVETRPDNPALTNLATETEYSDYADHGEVLTDIKSPGHIVHKQAGRPALDIQVKMVDANDPYLVFPVPSNVKAAATASASKTGGN*
Ga0111539_124535082	3300009094	Populus Rhizosphere	DHGEILTDVKSPGHIVEKLAGKPLLDVKTTKVDANNPYLVFPVPPNVKAARTQAGSSR*
Ga0066709_1010604762	3300009137	Grasslands Soil	ADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSR*
Ga0114129_118024701	3300009147	Populus Rhizosphere	VRKVETRPDNPSLANLAIETEYSDYADHGEILTDIQSPGRIVQRQGGRTVLDIQIKTWEANNPYLIFPVPQNVSGQK*
Ga0116218_15484241	3300009522	Peatlands Soil	YADHGEILTDIKSPGHIVRKQGGHPSLDIKVKTLDANNPYLVFPVPDNVKKAAAH*
Ga0126304_104931722	3300010037	Serpentine Soil	YADYADRAEVLTDIKTPGRIVRRQGCRTVLDIEVKNWETNNPYLVFPVPPNLKAPAAANSR*
Ga0126311_117824851	3300010045	Serpentine Soil	ADRAEVLTDIKTPGHIVRKQGGRTVLDVTIKNWETNDPYLVFPVPPNVKSAATR*
Ga0127497_11243361	3300010109	Grasslands Soil	TRPENAALANLAFETEYSGYRDHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAVATDSR*
Ga0134082_101705772	3300010303	Grasslands Soil	GEILTDIRSPGRIVRKQGGRTVLDIAVKMWEANNPYLVFPVPGNVKTAAGNSR*
Ga0134086_104805061	3300010323	Grasslands Soil	NAALANLASETEYSGYADHGEILTDIQSPGRIVQKQGSRTVLDIQIKTWESNNPYLIFPVPPNVKTAANSR*
Ga0134111_100290801	3300010329	Grasslands Soil	EYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKLWEANNPYVVFPVPGNVKTAAGNSR*
Ga0134111_105298141	3300010329	Grasslands Soil	TEYSDFADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSR*
Ga0126376_108177891	3300010359	Tropical Forest Soil	SDYADHGEILTDLESPGRIVEKQGGTTVLDIQVKMADLNNPYLVFPVPDTVKKASAELIQKR*
Ga0126372_103486442	3300010360	Tropical Forest Soil	RPDNPALTNMVTETEYSDYADHGEVLTDIKSPGRIVQRQGGRPMLDIQVKMWEANNPYLVFPVPPNVKAAAVSR*
Ga0126378_100959671	3300010361	Tropical Forest Soil	VEAHSDNPKLAGMIAEADYSDYADHGEILTDLESPGRIVEKQGGTTVLDIQVKMADLNNPYLVFPVPDTVKKASAELIQKR*
Ga0105239_130836101	3300010375	Corn Rhizosphere	ANLACTVEYSNYADHAEVLTDVQTPGRIVAKEGGRTVLDMTVKTWETNNPYLVFPVPPNVKAAPASTTSR*
Ga0126383_102293203	3300010398	Tropical Forest Soil	ANLAIEAEYSDYADHGEILTDIQSPGRIVQRQGGRTVLDIQIKTWEANNPYLIFPVPPNVSGRK*
Ga0126383_121939512	3300010398	Tropical Forest Soil	SLITKVETKPENSALAGLAFETEYSGYADHGEVLTDIKSPGHVVQKQAGRPVLDLQIKTWEGNNPYLVFPVPGNVKTASR*
Ga0150983_144568902	3300011120	Forest Soil	DIEADYSDYADHGEILTDIKSPGHIVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER*
Ga0137438_12537821	3300011431	Soil	TEYSNYADHAEVLTDIKSPGRIVRKQGGRTTFDIQVKAWETNNPYLVFPVPPNVKTAATANSR*
Ga0137365_110400882	3300012201	Vadose Zone Soil	FETEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKTAAGNSR*
Ga0137363_117872832	3300012202	Vadose Zone Soil	LTDVKSPGHIIRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKAAAR*
Ga0137380_108806672	3300012206	Vadose Zone Soil	GEILTDIKSPGRIVQKQGGSPVLDIQIKMWDANNPYLVFPIPGNVKNATAPGQSASRQP*
Ga0137377_100161357	3300012211	Vadose Zone Soil	LTDIKSPGRIVQKQGGSPVLDIQIKMWDANNPYLVFPIPGSVKNAAAPGQSASRQP*
Ga0137459_10920281	3300012228	Soil	VETRSDIPALATLTTQTEYSNYADRAEVLTMRPGVLMSVRKQGGRTILDIEVKTWETNNLYLVFPVPANVKAAATGNSR*
Ga0137371_103803802	3300012356	Vadose Zone Soil	PENAALANLAFETEYSGYADHGEILTDIRSPGRIIRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKTAAGNSR*
Ga0137371_113972331	3300012356	Vadose Zone Soil	RPDNPALANMATETEYSDYADHGEILTDIKSPGHIVQKQGGRPLLDIQVKWWEANNPYLVFPVPPNVKTNSR*
Ga0137385_110358011	3300012359	Vadose Zone Soil	QDTQALANMTTQTEYSDYADHGEILTNIKSPGHIVQRQGGRPMLDIQVKMWEANNPYLVFPVPPNVKTNSR*
Ga0137361_100104401	3300012362	Vadose Zone Soil	DIKSPGHIVEKQAGRPVLDLQVKMVNANDPYLVFTVRANVKAATTQTSATGTGGN*
Ga0134047_11524481	3300012380	Grasslands Soil	ANLSFEAEYSGYADHGEILTDIRSPGRIIRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAAGADSR*
Ga0134053_12166241	3300012406	Grasslands Soil	DHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAAGADSR*
Ga0137396_104363741	3300012918	Vadose Zone Soil	ALANLVTETEYSDYADHGEILTDIKSPGHIVQRQGGRPILDIQVNMWEANNPYLVFPIPPNVRTAASR*
Ga0137394_107544832	3300012922	Vadose Zone Soil	ETEYSGYADHGEILTNIKSPDHIVQRQGGRLMLDIQVKMWEANNPYLVFPVPPNVKTATR
Ga0137410_100939661	3300012944	Vadose Zone Soil	LAMETEYSDYADRGEVPTDIKSPGRIVQKQGGRPMLDIQVKTWEANNPYLVFPVPPNVKTASR*
Ga0137410_119775251	3300012944	Vadose Zone Soil	TRADNPARANLVTVTEYSNYADRGEVPTDIKTPGRIIRRMGGRTLLDIEVKSWETNDPYLVFPVPPNVKTAAAGNSR*
Ga0181538_104502541	3300014162	Bog	LLTDIKSPGHIVEKQAGSPVLDIRVKGVDANNPYLVFPVPANVKAASATGK*
Ga0075323_11633461	3300014301	Natural And Restored Wetlands	EVPTDIKTPGHIVRKRGGRTVLDVTVKNWETNDPYLVFPVPPNVSTH*
Ga0157380_111012422	3300014326	Switchgrass Rhizosphere	AEVLTDIKTPGRIVRRQGTRTVLDVNVMVWETNNPYLVFPVPANVKGAAANR*
Ga0182024_114367832	3300014501	Permafrost	DLNLEAEFTDYADHGEIPTDVKSPGHIVEKQGGKPMLDLQIKTWDANNPYLVFPVPENVKKAGGQ*
Ga0132256_1026786752	3300015372	Arabidopsis Rhizosphere	GEILTDVKSPGHIVLKQAGKPLLDVKTTKVDANNPYLVFPVPPNVKAARGQAGSSR*
Ga0132257_1022889212	3300015373	Arabidopsis Rhizosphere	GEILTDVKSPGRIVQRVGGKPLLDVKITKVDANNPYLVFPVPPNVKAARTQAGSSR*
Ga0132257_1037227911	3300015373	Arabidopsis Rhizosphere	SNYADHATEVLTDVKSPGHIVRKQGGRTVLDITVKSWEANDPYLVFPVPPNVKSAPSSR*
Ga0132255_1009310093	3300015374	Arabidopsis Rhizosphere	YADHGEILTDVKSPGHIVLKQAGKPLLDVKTTKVDANNPYLVFPVPPNVKAARGQAGSSR
Ga0134069_11985421	3300017654	Grasslands Soil	TLDSKNFVTKVETRPDNPTLANMAIETEYFDYADHGEIQTDIKSPGHIVQRQGGRPMLDIQVKMWEANNPYLVFPVPPNVKTNSR
Ga0134112_100540303	3300017656	Grasslands Soil	LTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYLVFPVPGNVKTAAGNSR
Ga0187817_101027341	3300017955	Freshwater Sediment	ADHGELLTDIKSPGHIVEKQAGRPMLDIRVKGVDANNPYLVFPVPANVKAASATAK
Ga0187822_102810982	3300017994	Freshwater Sediment	VRATLDSKNLVTKVETHSENPALTNFVTEYSEYADHGELLTDVMSPGHVVQKQDGRLVLDLRIKMVDANNPYLVFPVPQSVKTAAAATSGPK
Ga0187822_103114791	3300017994	Freshwater Sediment	HGEIATDILSPGHIVRKQGGHPVLDIQVKMLDANNPYLVFPVPENVKKAAAH
Ga0184610_12632852	3300017997	Groundwater Sediment	SNYADHGEILTDIKSPGRIVRRQRGRTILDIEVKTWEANNPYLVFPIPPNVRGAATANR
Ga0184627_100623321	3300018079	Groundwater Sediment	NPARVNLATQTEYSSYADRGEVLTDIKSPGHIIRRQGGRTLFDMEVKAWESNNPYLVFPVPPNVKAAATATSR
Ga0184627_105123341	3300018079	Groundwater Sediment	VTHTEYSNYADRAEILKDIKTPGRIVRKQGGRTILDLELKTAETNNPYLVFPVPPNVKAAASQSR
Ga0184639_103533551	3300018082	Groundwater Sediment	LTDIKSPGRIIRRQGGRTLLDIEVKTWETNNLYLVFPVPPNVKTAATANSR
Ga0184639_104953582	3300018082	Groundwater Sediment	EYSNYADRAEILTNIKSPGRIVRRQDGRTILDIAVKTWETNNPYLVFPVPPNVKAAATAKSR
Ga0190265_114302333	3300018422	Soil	RAEDLTDIKTPGRIVRRQGGRTILDLELKTAETNNPYLVFPVPPNVKTAASQSR
Ga0066655_105130172	3300018431	Grasslands Soil	YSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTVANSR
Ga0190274_132200051	3300018476	Soil	VLSDIKSPGHIVRRQGGRTVLDIEVKTWESNNPYLVFPVPTNVKTATPANSR
Ga0210407_106658641	3300020579	Soil	DHGEILTDIKSPGHMVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210399_102334201	3300020581	Soil	PALTNLVTETEYSDYADHGEVLTDIKSPGHIVEKQGGKPFLDLQVKMVNANDPYLVFPVPPNVKSATTQASANTNK
Ga0210400_115893892	3300021170	Soil	EIATDVKSPGHIVRKQGGHPVLDVQVKTWDANNPYLVFPVPENVKQAASH
Ga0210405_102366571	3300021171	Soil	ILTDIKSPGHVVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210405_108987131	3300021171	Soil	VDHGEILTDIKSPGHIIQEQEGHPALDIHVTKVDANNPYLVFPVPENVKKAKTP
Ga0210405_110945481	3300021171	Soil	VETRPDNPALTNLATETEYSDYADHGEVLTDIKSPGHIIEKQGGKPLLDLQVIMVNANDPYLVFPVPPNVKSATTQASAITSGRK
Ga0210405_113699782	3300021171	Soil	LTDIKSPGHMVEKQGGSTVLDIQIKSWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210397_114822492	3300021403	Soil	TDIKSPGHIVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210389_106596462	3300021404	Soil	DYKDHGEIATDVMSPGHIRWKQGGHPVMDLQVKMLDANNPYLVFPVPENVKQAAAR
Ga0210383_117331242	3300021407	Soil	YADHGEIATDVKSPGHIVRKQGGHLLLDIKVKMLDANNPYLVFPVPQNVKMAAAH
Ga0210398_108923192	3300021477	Soil	DYADHGELLTDVKSPGHIVEKQAGRPVLDIRVKMVDANNPYLVFPVPPNVKAASATGK
Ga0210402_118577622	3300021478	Soil	ADHGEIATDVKSPGHIVRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKTAAH
Ga0210410_116717382	3300021479	Soil	TETEYSDYADHGELLTDIKSPGHIVQKQTGHPLLDIQVKKVDANNPYLVFPVPENVKKPVAR
Ga0210409_112217432	3300021559	Soil	DYADHGEILTDVKSPGHIVRKQSGHPLLDIQVKMLDANNPYLVFPVPENVKKAAAH
Ga0242642_10389502	3300022504	Soil	PDNPALTNLATETEYSDYADHGEVLTDIKSPGHIVEKQGGKLLLDLQVKMVNANDPYLVFPVPPNVKSATTQASAITSGRR
Ga0242660_10366971	3300022531	Soil	GEVLTDIKSPGHIVEKQGGKPLLDLQVIMVNANDPYLVFPVPPNVKSATTQASAITSGRK
Ga0242654_103301991	3300022726	Soil	TNLVTETEYSDYADHGEVLTDIKSPGHIVEKQGGKPFLDLQVKMVNANDPYLVFPVPPNVKSATTQASANTPGAK
Ga0224564_10221331	3300024271	Soil	ELLTETEYSDYADHGEILTDVKSPGHIVQKQGGHTVLDIQVKKVDANNPYLVFPVPENIKKAAVN
Ga0137417_14346041	3300024330	Vadose Zone Soil	GEILTDVKSPGHIVRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKAAAR
Ga0209109_103244141	3300025160	Soil	TRVETRPDNPALATLATQTEFANYADRAEVLTDIKSPGRMIRKQGGRTLLDIDVKTWETNNPYLVFPVPPNVKTAAN
Ga0209108_101740092	3300025165	Soil	VLTDIKTPGRIIRKQNGRMRTLLDVEVKTWETNNPYLVFPVPPNVKTAAPANSR
Ga0209640_100916754	3300025324	Soil	VLTDIKTPGRIIRKQNGRTLLDVEVKTWETNNPYLVFPVPPNVKTAAPANSR
Ga0207649_112269251	3300025920	Corn Rhizosphere	EYSGYADHAEVLTDVKTPAHMVFKRGGRTVADITVKTWETNNPYLVFPVPPNVKAAPATTSR
Ga0207704_109903502	3300025938	Miscanthus Rhizosphere	HAEVLTDIKTPGHIVGKRDGRTVFDLTVKSWETNNPYLVFPVPPNVKAAATTSPTSR
Ga0207679_119912722	3300025945	Corn Rhizosphere	NLATETDYSDYADRAEVLTDIKTPGHIVRKQAGRTTLDITVKNWETNDPYLVFPVPVNVKSAPTPTSR
Ga0207677_111053292	3300026023	Miscanthus Rhizosphere	ATETEYSDYADRGEVLTDIKSPGHIVRRQGGRPVLDIRVKMWEANNLYLVFPIPQNVKTAAAASSR
Ga0207648_110632582	3300026089	Miscanthus Rhizosphere	SDYADRAEVLTDIKTPGHIVRKQGGRTVLDIQVKTWETNDPYLVFPVPPNVKSAATR
Ga0209472_11776362	3300026323	Soil	SGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYLVFPVPGNVKAAATDSR
Ga0209801_13097011	3300026326	Soil	NLAFETEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKLWEANNPYVVFPVPGNVKTAAGNSR
Ga0209267_11273021	3300026331	Soil	VTKVETTPDNSSLNNLATETEYSDYADHGEVLTDIKSPGHIVQKQAGRLVLDLQVKMVDANNPYFVFPVPPNVKAATSASARGTGGN
Ga0209057_12105701	3300026342	Soil	SGYRDHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAAGADSR
Ga0209378_12922282	3300026528	Soil	ALANMATETEYSGYADHGEVLTDIKSPGRIVKKQGGRPILDIQVSMWEANNPYLVFPVPPNVKTAASR
Ga0209003_10283372	3300027576	Forest Soil	LTDIKSPGHLIEKQGGSTVLDIQIKSWDANNPYLVFPIPQNVKMATQESSKVAEK
Ga0209682_101683052	3300027716	Wetland Sediment	VLTDIKTPGHIVRQQAGRTVLDITVKNWETNNLYLVFPVPANVKAATPASAR
Ga0209178_11017952	3300027725	Agricultural Soil	ILTDVKSPGHIVEKQAGKPLLDLQVKMVNANDPYLVFPVPQNVKSAAASTSASATGRN
Ga0209060_105067512	3300027826	Surface Soil	SKSLITKVESKPSNPSQTNLAREVEYSDYADHGEILTDMKSPGHIVEKEAGKPLLDLQVKMVNADNPYLVFPVPQNVKAAAATQTSASANTAK
Ga0209701_103942112	3300027862	Vadose Zone Soil	YADHGEIPTDVKSPGHIVQKQGGHTLLDIQVKKVDANNPYLVFPVPENVKKAAAH
Ga0209579_101747601	3300027869	Surface Soil	DHGDILTDIKSPGHIVQKQGATTLLDIQIKMWDANNPYLVFPVPPNVKKTGSQQSANRAQ
Ga0209590_102589911	3300027882	Vadose Zone Soil	TEYSNYADRGEVLTDIKSPGHIVRKQSGRTILDIEVKTWETNNPYLVFPVPPSVKAATTGTSR
Ga0209590_109262301	3300027882	Vadose Zone Soil	SDYADHAEVLTDIKTPGHVVRKQGGRTVLDIQIKSWETNDPYLVFPVPPNVKSAATR
Ga0209488_100314546	3300027903	Vadose Zone Soil	HGEILTDVKSPGHIIRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKAAAR
Ga0308309_102043111	3300028906	Soil	DILTDIKSPGRIVQKQGATTLLDIQIKMWDANNPYVVFPVPPNVKKTGTQQSANRAQ
Ga0311339_115968111	3300029999	Palsa	TQTDNPAMGDLATEVDYSDYADHGEILTDVKSPGHIVEKKAGRTVLDIQIKTWDANNPYLVFPVPEVVKKAGA
Ga0307500_103166492	3300031198	Soil	RAEVLTDIKTPGHMVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR
Ga0302324_1023293011	3300031236	Palsa	LATEVDYSDYADHGEILTDVKSPGHIVEKKAGRTVLDIQIKTWDANNPYLVFPVPEVVKKAGA
Ga0307408_1000849763	3300031548	Rhizosphere	ANNLVTRVETRSDNPALVTQTDYADYADRAEVLTDIKTPGRIVRRQGGRTVLDIEVKNWETNNPYLVFPVPPNLKAPAAANSR
Ga0307484_1170862	3300031663	Hardwood Forest Soil	YADHGEILTDIKSPGHVVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0310686_1086119623	3300031708	Soil	EILTDVKSPGHIVRKQNGHTVLDIKVKTLDANNPYLVFPVPENVKKAAAH
Ga0310686_1100595622	3300031708	Soil	ADLNTETEYSDYADHGEILTDVKSPGHIVRKQNGHTVLDIKVKTLDANNPYLVFPVPADIKKVAAD
Ga0307476_108110051	3300031715	Hardwood Forest Soil	DHGEVLTDIKSPGHIVEKQGGKPVLDLQVKMVNANDPYLVFPVPPNVKSATAQASANSSGSK
Ga0307474_105485221	3300031718	Hardwood Forest Soil	LTGMATETEYSEYADHGEIATDVKSPGHIVRKQAGHPVLDLHVKMLDANNPYLVFPVPENVKKAAAQ
Ga0307469_102999591	3300031720	Hardwood Forest Soil	ANMAIEADYSDYADHAEVLTDIKTPGHIVRKQGGRTVLDIQIKSWETNDPYLVFPVPPNVKTAATR
Ga0307475_104112172	3300031754	Hardwood Forest Soil	YADHGEILTDIKSPGHIVEKQGGSTVLDIQIKSWDANNPYLVFPIPQNVKMATQQSSKVAEK
Ga0307412_102376202	3300031911	Rhizosphere	EVLTDIKTPGRIVRRQGGRTVLDIEVKNWETNNPYLVFPVPPNLKAPAAANSR
Ga0310901_103486552	3300031940	Soil	CTVEYSNYADHAEVLTDVQTPGRIVAKEGGRTVLDMTVKTWETNNPYLVFPVPPNVKAAPASTTSR
Ga0307479_101908933	3300031962	Hardwood Forest Soil	VLTDIKSPGHIVEKRAGQAVLDLQVKMVDANDPYLVFPVPPNVKAATASASAGKTGGD
Ga0315281_106396271	3300032163	Sediment	TRPDNPARVNLATQTEYSNYADRGEVLSDIKSPGHIVRRQGGRTLLDIEVKAWETNNPYLVFPVPPNVKTAATANSR
Ga0307470_107568373	3300032174	Hardwood Forest Soil	YADRAEVLTDIKTPGHIVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR
Ga0335085_116876021	3300032770	Soil	DYADRAEVLTDIKTPGHIVRKEGGRTVLDIDVKTWETNNPYAVFPVPASVKASSSTPAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045278

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences