NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F044759

Metagenome / Metatranscriptome Family F044759

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F044759
Family Type Metagenome / Metatranscriptome
Number of Sequences 154
Average Sequence Length 79 residues
Representative Sequence MPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Number of Associated Samples 125
Number of Associated Scaffolds 154

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.73 %
% of genes near scaffold ends (potentially truncated) 32.47 %
% of genes from short scaffolds (< 2000 bps) 98.05 %
Associated GOLD sequencing projects 113
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.883 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.584 % of family members)
Environment Ontology (ENVO) Unclassified
(36.364 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.506 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.
1ICChiseqgaiiDRAFT_04898291
2ICChiseqgaiiFebDRAFT_110056352
3JGI1027J11758_122988191
4JGI10214J12806_110218883
5JGI1027J12803_1000729081
6JGI1027J12803_1048989782
7C688J35102_1199964582
8Ga0062593_1017105511
9Ga0063356_1022426132
10Ga0063356_1060729141
11Ga0063356_1064931781
12Ga0062594_1000449344
13Ga0062594_1012201261
14Ga0062594_1017661252
15Ga0070676_109039581
16Ga0070691_101134833
17Ga0070692_106460521
18Ga0070668_1007833201
19Ga0070668_1009168731
20Ga0070688_1010508161
21Ga0070659_1006005582
22Ga0070711_1017854511
23Ga0070663_1008069711
24Ga0068867_1010349261
25Ga0070697_1004754372
26Ga0068853_1008469853
27Ga0068857_1016792101
28Ga0068854_1009048322
29Ga0070702_1012669901
30Ga0068861_1007432181
31Ga0068861_1007719932
32Ga0068861_1008380722
33Ga0068860_1015329362
34Ga0068862_1019091771
35Ga0070715_103264742
36Ga0070712_1003289782
37Ga0075428_1022437121
38Ga0075420_1006005622
39Ga0105095_100880761
40Ga0105106_104427571
41Ga0111539_120587941
42Ga0105247_100411383
43Ga0105091_101894692
44Ga0105091_103038741
45Ga0105094_101436341
46Ga0111538_110296502
47Ga0105092_105171862
48Ga0105100_105558652
49Ga0105104_106186801
50Ga0105237_110354611
51Ga0105238_113008111
52Ga0126309_110173591
53Ga0127503_111273713
54Ga0127503_113276562
55Ga0126306_106086461
56Ga0105239_105496603
57Ga0105239_113534001
58Ga0105239_113598431
59Ga0105239_132966751
60Ga0134124_111110191
61Ga0105246_121186031
62Ga0150985_1029689661
63Ga0137397_111153642
64Ga0137404_114874081
65Ga0137407_110703562
66Ga0162651_1000392071
67Ga0162652_1000190773
68Ga0164298_101407962
69Ga0164303_101216252
70Ga0164303_102483752
71Ga0164299_102371612
72Ga0164302_107182451
73Ga0164308_106793902
74Ga0164308_118309081
75Ga0164304_106503622
76Ga0164306_101431011
77Ga0157378_111818581
78Ga0163162_127594381
79Ga0157372_125435811
80Ga0157379_100667377
81Ga0157379_106983543
82Ga0157376_113684331
83Ga0173480_101978521
84Ga0163161_103730001
85Ga0190266_109962601
86Ga0184608_103654611
87Ga0184634_103178941
88Ga0184638_10915682
89Ga0184626_103295322
90Ga0184611_11964452
91Ga0184609_104609861
92Ga0184612_101064853
93Ga0184612_101433792
94Ga0184612_104167501
95Ga0184625_104111502
96Ga0190270_105180911
97Ga0190270_108538361
98Ga0190274_131682361
99Ga0190271_106599181
100Ga0184644_16947912
101Ga0193727_10634521
102Ga0193731_11408572
103Ga0210407_110666672
104Ga0210399_105253441
105Ga0210406_105102732
106Ga0210406_106580122
107Ga0247754_10789321
108Ga0209431_105287801
109Ga0209341_112447801
110Ga0207710_101360293
111Ga0207688_102848453
112Ga0207663_108458791
113Ga0207650_117219091
114Ga0207701_110261711
115Ga0207690_107896651
116Ga0207690_116887192
117Ga0207706_104213553
118Ga0207639_116096861
119Ga0207678_105791861
120Ga0207674_120604011
121Ga0207675_1004840143
122Ga0209703_10882353
123Ga0209593_102507251
124Ga0268266_123594132
125Ga0268265_119220751
126Ga0247822_117476461
127Ga0307287_102794071
128Ga0307287_103499212
129Ga0307287_103941321
130Ga0247824_105528122
131Ga0247824_110790331
132Ga0247827_112911292
133Ga0308206_10827441
134Ga0308190_10755391
135Ga0308197_103205501
136Ga0307496_100429902
137Ga0170824_1103825131
138Ga0170824_1283800562
139Ga0310887_106810131
140Ga0310886_105769141
141Ga0307469_108586401
142Ga0307468_1006400553
143Ga0307468_1019755041
144Ga0214473_109812951
145Ga0310903_106000821
146Ga0310906_113501901
147Ga0307470_104865522
148Ga0307470_111835021
149Ga0307471_1010726493
150Ga0307471_1017957001
151Ga0307471_1029071511
152Ga0307472_1007772802
153Ga0310896_103556592
154Ga0247830_107484751
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.72%    β-sheet: 0.00%    Coil/Unstructured: 45.28%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
33.1%66.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Soil
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Serpentine Soil
Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Hardwood Forest Soil
Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Soil
Soil
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
6.5%6.5%15.6%3.9%5.8%6.5%5.2%3.2%4.5%3.9%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_048982913300000033SoilMPFSNYLDNFDPETLAILDAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNSKRLKELALAALPRTLEAS*
ICChiseqgaiiFebDRAFT_1100563523300000363SoilVLFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRTLETQ*
JGI1027J11758_1229881913300000789SoilMRFSNYRDNFEPETLAVLDAAFNEAWYALQTSRGEFDKEATKRALADLIMSFAAEGDTDPKRLKAKALA
JGI10214J12806_1102188833300000891SoilMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIMSFAAEGETNPKRLKELALAALPRTLRTP*
JGI1027J12803_10007290813300000955SoilMRFSNYRDNFEPETLAVLDASFNEAWYALQTSRGEFDKEATKRALADLIMSFAAEGDTDPKRLKAKALAALPYVLAGTPDPVAG*
JGI1027J12803_10489897823300000955SoilMPFSNPFSNYRDNFDSETLAILEAAFNEAWEVLTNSGGTFDREATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP*
C688J35102_11999645823300002568SoilMTFTYHRGSFDPETLAILEAAFNEAWKVIEASGGQFDPNATRNAIADLVISFAAEGERDPKRLKAMCLADLPRALS*
Ga0062593_10171055113300004114SoilMPFSDYSDDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGEADPKRLKELAL
Ga0063356_10224261323300004463Arabidopsis Thaliana RhizosphereMPFSNYRDNYDAATLAILQAAFDEAWEVLTTSGGSFDQEATRTALADLIMSFAAEGETNPKRLKELALAALPRTLEAS*
Ga0063356_10607291413300004463Arabidopsis Thaliana RhizosphereYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRTLETQ*
Ga0063356_10649317813300004463Arabidopsis Thaliana RhizosphereMRFSNYRDNFEPETLAVLDAAFNEAWYALQTSRGEFDKEATKRALADLIMSFAAEGDTDPKRLKAKALAALPYVLAGTPDPVAG*
Ga0062594_10004493443300005093SoilVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRFLETP*
Ga0062594_10122012613300005093SoilMPFSDYSDDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGEADPKRLKELALSALPRTLEGHRKGAD*
Ga0062594_10176612523300005093SoilMPFSNYLDNFDPETLAILDAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLEAS*
Ga0070676_1090395813300005328Miscanthus RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEVETASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0070691_1011348333300005341Corn, Switchgrass And Miscanthus RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP*
Ga0070692_1064605213300005345Corn, Switchgrass And Miscanthus RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0070668_10078332013300005347Switchgrass RhizosphereMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP*
Ga0070668_10091687313300005347Switchgrass RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP*
Ga0070688_10105081613300005365Switchgrass RhizosphereLLVVSAATVRLRSGTAVLETAFNEGGEVLLASGGDFDHKATREALAELIISFAAEGETDPKRLKQLALAALPRALETP*
Ga0070659_10060055823300005366Corn RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0070711_10178545113300005439Corn, Switchgrass And Miscanthus RhizosphereMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKE
Ga0070663_10080697113300005455Corn RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP*
Ga0068867_10103492613300005459Miscanthus RhizosphereMKVSGRASWGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP*
Ga0070697_10047543723300005536Corn, Switchgrass And Miscanthus RhizosphereVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATKDALAEVIISFAAEGETDPKRLKALALSALPRTLETP*
Ga0068853_10084698533300005539Corn RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPK
Ga0068857_10167921013300005577Corn RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIMSFAAEGETNPKRLKELALAALPRTLGTP*
Ga0068854_10090483223300005578Corn RhizosphereNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0070702_10126699013300005615Corn, Switchgrass And Miscanthus RhizosphereFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRFLETP*
Ga0068861_10074321813300005719Switchgrass RhizosphereMPFNKPFGNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP*
Ga0068861_10077199323300005719Switchgrass RhizosphereMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0068861_10083807223300005719Switchgrass RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0068860_10153293623300005843Switchgrass RhizosphereMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNAVADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0068862_10190917713300005844Switchgrass RhizosphereMPFSDYRDNFAPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0070715_1032647423300006163Corn, Switchgrass And Miscanthus RhizosphereMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKELALAALPRTLTP*
Ga0070712_10032897823300006175Corn, Switchgrass And Miscanthus RhizosphereMPFSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKELALAALPRTLTP*
Ga0075428_10224371213300006844Populus RhizosphereVEIPPREDTPVPFSNYRDNYDPETLAILEAAFNQAWEVLIVSKGEFDQKATRDALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0075420_10060056223300006853Populus RhizosphereMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNSKRLKELALAALPRTLEAS*
Ga0105095_1008807613300009053Freshwater SedimentMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLEGS*
Ga0105106_1044275713300009078Freshwater SedimentMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETKPKRLKELALAALPRTLEAP*
Ga0111539_1205879413300009094Populus RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP*
Ga0105247_1004113833300009101Switchgrass RhizosphereLGVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRFLETP*
Ga0105091_1018946923300009146Freshwater SedimentMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0105091_1030387413300009146Freshwater SedimentNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAEIIISFAAEGETNPKRLKELALAALPRTLETP*
Ga0105094_1014363413300009153Freshwater SedimentMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLE
Ga0111538_1102965023300009156Populus RhizosphereMPFSNYLDNFDPETLAILDAAFNEAWEVLVTSGGTFDQEVMRNALADLIMTFAAEGETNPKRLKELALAALPRTLEAS*
Ga0105092_1051718623300009157Freshwater SedimentVPFSNYRANFEPETLAKLEIALNEAWEVLIASGGSFDHEATRNALAELIISFAAEGETNPKRLKELALAALPRALETP*
Ga0105100_1055586523300009166Freshwater SedimentVPFNSYRDNFDPEMLAILEAAFNEAWATVTTSGANLDQQVTRAALADLIVYFASEGETDPKRLKERALTALPRVL
Ga0105104_1061868013300009168Freshwater SedimentMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAEIIISIAAEGETKPKQLKELELQALPRT
Ga0105237_1103546113300009545Corn RhizosphereNFDPETLAILEAAFNEAWEVLMASGGDFDQVATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0105238_1130081113300009551Corn RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLETP*
Ga0126309_1101735913300010039Serpentine SoilRLWIADSRIERAQPMTFTYARGSFDPETLAILEAACNVAWEAIETSGGEFDPNATRNAIADLVISFAAEGERDPKRLKAMCLADLPRALE*
Ga0127503_1112737133300010154SoilDNFDPETLAILEIAFNEAWDVLLASGGSFDQTATRDALAELIISFAAEGETDPKRLKELALADLPRTLETQ*
Ga0127503_1132765623300010154SoilMLFSNYRDNFDAETLAILEIAFNEAWEVLLASGGDFDQKATRNALAELIMSFAAEGETDPKRLKTLALAELPRTLETQ*
Ga0126306_1060864613300010166Serpentine SoilVPFSNYRDNFDPETLAILEAAFNEAWEVLMASGGSFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRALEAP*
Ga0105239_1054966033300010375Corn RhizosphereLGVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLQELALADLPRFLETP*
Ga0105239_1135340013300010375Corn RhizosphereAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP*
Ga0105239_1135984313300010375Corn RhizosphereLVVSAATVRLRSGTAVLETAFNEGGEVLLASGGDFDHKATREALAELIISFAAEGETDPKRLKQLALAALPRAL
Ga0105239_1329667513300010375Corn RhizosphereMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGEADPKRLKELALSAL
Ga0134124_1111101913300010397Terrestrial SoilMPFSDYSDDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0105246_1211860313300011119Miscanthus RhizosphereMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELA
Ga0150985_10296896613300012212Avena Fatua RhizosphereFTYHRGSFDPETLAILEAACNVAWEVIEASGGEFDPNATRNAIADLVISFAAEGERDPKRLKAMCLADLPRALS*
Ga0137397_1111536423300012685Vadose Zone SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVQASGGEFDQETTRSALADLIMSFAAEGETDPKRLKAKVLAALPYVLGTNSGKP*
Ga0137404_1148740813300012929Vadose Zone SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVQASGGEFDQETTRSALADLIMSFAAEGETAPKRLKARVLAALPYVLGTQ*
Ga0137407_1107035623300012930Vadose Zone SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVQASGGEFDQETTRSALADLIMSFAAEGETDPKRLKAKVLAALPYVLGTQ*
Ga0162651_10003920713300012938SoilHYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0162652_10001907733300012941SoilMTFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP*
Ga0164298_1014079623300012955SoilMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKELAWAALPRTLTP*
Ga0164303_1012162523300012957SoilVPFSNYRDNFDAETLAILEIAFNEAWDVLLASGGDFDQKATRDALAELIVSFAAEGETDPKRLKALALADLPRTLETQ*
Ga0164303_1024837523300012957SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVQASGAEFDQETTRSALADLIMSFAAEGETDPKRLKAKVLAALPYVLGTQ*
Ga0164299_1023716123300012958SoilLGVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETDPKRLKELALADLPRALETP*
Ga0164302_1071824513300012961SoilVPFSDYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALAGLIVGFAAEGETDPKRLKQLALSALPRTLEAP*
Ga0164308_1067939023300012985SoilMPSSNPFTNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFEQEATRNALADLIMSYASEGETNPKRLKELALAALPRTLTP*
Ga0164308_1183090813300012985SoilTPETHVPFSSYRDNFDAETLAILEIAFNEAWEVLLASGGHFDQKATRDALAELIISFAAEGETDPKRLKQLALSALPRTLEAP*
Ga0164304_1065036223300012986SoilVPFSSYRDNFDAETLAILEIAFNEAWEVLLASGGHFDQKATRDALAELIISFAAEGETDPKRLKELALADLPRALETP*
Ga0164306_1014310113300012988SoilDGLGTLRCAERIFPMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKELALAALPRTLTP*
Ga0157378_1118185813300013297Miscanthus RhizospherePPTMLFSNYRDNFDPETLAILEIAFNEAWEVLLASGGDFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRFLETP*
Ga0163162_1275943813300013306Switchgrass RhizosphereVPFSNYRDNFDADTLAILEIAFNEAWEVLLDNLGNFDQEATRNALAELIISFAAEGETDPKRLKALALAALPRTLQTP*
Ga0157372_1254358113300013307Corn RhizosphereMPFSDYSDDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSA
Ga0157379_1006673773300014968Switchgrass RhizosphereLGVPFSNYRDNFDPETLPILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRFLETP*
Ga0157379_1069835433300014968Switchgrass RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEVVTGSGGDFDQEPTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP*
Ga0157376_1136843313300014969Miscanthus RhizosphereMPFSDYSDDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGEADPKRLKELALSALPRTLEAP*
Ga0173480_1019785213300015200SoilYSRGAERICPMPFSNYLDNFDPETLAILDAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLEAS*
Ga0163161_1037300013300017792Switchgrass RhizosphereMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTS
Ga0190266_1099626013300017965SoilMNVSGGLLVGNYDILIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQEITRNALAELIISFAAEGETDPKR
Ga0184608_1036546113300018028Groundwater SedimentVPFSDYCDNFDPETLAILEIAFNEAWEVLLASGGAFDPKATRDALAELIISFAAEGETDPKRLKQLALSALLRTLETP
Ga0184634_1031789413300018031Groundwater SedimentMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPRRLKELALSALPRTLEAP
Ga0184638_109156823300018052Groundwater SedimentVPFSDYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALAELIVSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0184626_1032953223300018053Groundwater SedimentLPFGNYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALAELIVSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0184611_119644523300018067Groundwater SedimentMPFSDYSDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Ga0184609_1046098613300018076Groundwater SedimentVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALAELIVSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0184612_1010648533300018078Groundwater SedimentLPFGNYRDNFDPETLAILEIAFNEAWDVLLASGGSFDQNATRDALAELIISFAAEGETNPKRLKELALSALPRTLETP
Ga0184612_1014337923300018078Groundwater SedimentVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETDPKRLKELALADLPRTLETQ
Ga0184612_1041675013300018078Groundwater SedimentRTLRCAEGICPMPFSHPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP
Ga0184625_1041115023300018081Groundwater SedimentNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALANLIMSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0190270_1051809113300018469SoilMPFSNYRDNFDPETLAILEAAFNEAWEVLTASGGIFDQEATRDALADLIMSFAAEGETNPKRLKELALSALPRALEAP
Ga0190270_1085383613300018469SoilLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQEPTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0190274_1316823613300018476SoilMPFSNYRDNFDPETLAILEAAFNEAWEVLTASGGIFDQEATRDALADLIMSFAAEGETNPKRLKELALAALPRTLEAS
Ga0190271_1065991813300018481SoilLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIMSFAAEGETNPKRLKELALAALPRTLGTP
Ga0184644_169479123300019269Groundwater SedimentMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Ga0193727_106345213300019886SoilDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Ga0193731_114085723300020001SoilFSDYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALAELIVSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0210407_1106666723300020579SoilDPEMLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGEANPKRLKELALSALPRTLEAP
Ga0210399_1052534413300020581SoilMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFEQEATRNALADLIMSYASEGETNPKRLKGLALAALPRTLTP
Ga0210406_1051027323300021168SoilMPLSNPFGNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLNSHWRLCREP
Ga0210406_1065801223300021168SoilMPFSDYRDNFDPEMLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Ga0247754_107893213300023102SoilMPFSNYLDNFDPETLAILDAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNSKRLKELALAALPRTLEAS
Ga0209431_1052878013300025313SoilMPFSNYQDNFNPETLAILEAAFNEAWEVLVTSGGTFDQEVMRNALADLIMTFAAEGETNPKRLMELALAALPRTLEAL
Ga0209341_1124478013300025325SoilMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLEAS
Ga0207710_1013602933300025900Switchgrass RhizosphereVPFSNYRDNFDPETLAILEIAFNEAWEVLLASGGNFDQKATRDALAELIISFAAEGETNPKRLKELALADLPRFLETP
Ga0207688_1028484533300025901Corn, Switchgrass And Miscanthus RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP
Ga0207663_1084587913300025916Corn, Switchgrass And Miscanthus RhizosphereMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKEVALAALPRALTP
Ga0207650_1172190913300025925Switchgrass RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISLAAEGETNPKRLKELALAALPRTLGTP
Ga0207701_1102617113300025930Corn, Switchgrass And Miscanthus RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP
Ga0207690_1078966513300025932Corn RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEA
Ga0207690_1168871923300025932Corn RhizosphereLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0207706_1042135533300025933Corn RhizosphereMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP
Ga0207639_1160968613300026041Corn RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP
Ga0207678_1057918613300026067Corn RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0207674_1206040113300026116Corn RhizosphereLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETN
Ga0207675_10048401433300026118Switchgrass RhizosphereMPLSHPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP
Ga0209703_108823533300027723Freshwater SedimentMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLEGS
Ga0209593_1025072513300027743Freshwater SedimentLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDRETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0268266_1235941323300028379Switchgrass RhizosphereNCDNLIGCAERQARMPFSAYRDNFEAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPQTLGTP
Ga0268265_1192207513300028380Switchgrass RhizosphereMNVSGRASCGNCDNLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEG
Ga0247822_1174764613300028592SoilMPMPFSNPFNNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP
Ga0307287_1027940713300028796SoilVPFSDYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALADLIMSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0307287_1034992123300028796SoilVPFSDYCDNFDPETLAILEIAFNEAWEVLLASGGAFDPKATRDALAELIISFAAEGETDPKRLKQLALAALP
Ga0307287_1039413213300028796SoilMSFSNPFYNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP
Ga0247824_1055281223300028809SoilVPFSDYCDNFDPETLAILEIAFNEAWEVLLASGGAFDPKATRDVLAELIISFAAEGETDPKRLKQLALAALPRALENP
Ga0247824_1107903313300028809SoilLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQEPTRNALAELIISFAAEGETNPKRLKELALEALPRTLETP
Ga0247827_1129112923300028889SoilIIMMGLGGYAPMPLSHPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP
Ga0308206_108274413300030903SoilLRGEDTPPMPFSDYRDNFDPETLAILEAAFNEAWEVLMTSGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Ga0308190_107553913300030993SoilPREALPVPFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALADLIMSFAAEGETDPKRLKQLALSALPRTLEAP
Ga0308197_1032055013300031093SoilDNFDPEKLAILEIAFNEAWEVLLASGGVFDPKATRDALAELIISFAAEGETDPKRLKQLALAALPRTLETP
Ga0307496_1004299023300031200SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVHASGGDFDQETTRSALADLIMSFAAEGETDPKRLKAKVLAALPYVLGTQ
Ga0170824_11038251313300031231Forest SoilMPFSDYRANFDPEMLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLTELALS
Ga0170824_12838005623300031231Forest SoilMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMNFAAEGETNPKRLKELALSALPRTLEAP
Ga0310887_1068101313300031547SoilVELCPRSRDVPFSSYRDNFDAETLAILEAAFNEAWEAVTSSGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0310886_1057691413300031562SoilLIGCAERQARMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0307469_1085864013300031720Hardwood Forest SoilMPFSHPFSNYRDNFAPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTP
Ga0307468_10064005533300031740Hardwood Forest SoilVPFSDYCDNFDPETLAILEIAFNEAWEVLLASGGTFDPKATRDALAELIISFAAEGETDPKRLKQLALAALPRTLETP
Ga0307468_10197550413300031740Hardwood Forest SoilMPFSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAA
Ga0214473_1098129513300031949SoilMPFSNYQDNFDPETLAILEAAFNEAWEVLVTSGGRFDQEVMRNALADLIMTFAAEGETNPKRLMELALAALPRTLEAL
Ga0310903_1060008213300032000SoilPETLAILDAAFNEAWEVLVTSGGTFDQEVTRNALADLIMTFAAEGETNPKRLKELALAALPRTLEAS
Ga0310906_1135019013300032013SoilMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQETTRNALAELIISFAAEGETNPKRLKELAL
Ga0307470_1048655223300032174Hardwood Forest SoilVPFSDYRDNFDPETLAILEIAFNEAWEVLLASGGTFDQMATRDALAELIVSFAAEGETDPKRLKQLALSALPRSLEAP
Ga0307470_1118350213300032174Hardwood Forest SoilMPFSDYRDNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRDALADLIMSFAAEGETNPKRLKELALSALPRTLEAP
Ga0307471_10107264933300032180Hardwood Forest SoilMPLSNPFSNYRDNFDPETLAILEAAFNEAWEVLTNSGGAFDQEATRNALADLIMSYASEGETNPKRLKELALAALPRTLTP
Ga0307471_10179570013300032180Hardwood Forest SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVQASGGEFDQETTRSALADLIMSFAAEGETDPKRLKAKVLAALPYVLGTQ
Ga0307471_10290715113300032180Hardwood Forest SoilMPFSNPFRNYRDNFDPETLAILEAAFNEAWEVLTNSGGTFDQEATRNALADLIMSFASEGETNPKRLKELALAALPRTLTS
Ga0307472_10077728023300032205Hardwood Forest SoilMPFSNYRDNFEPETLAVLEVAFNEVWEVVQASGGEFDQETTRSALADLIMSFAAEGEADPKRLKAKVLAALPYVLGTQ
Ga0310896_1035565923300032211SoilMPFSAYRDNFDAETLAILEAAFNEAWEVVTASGGDFDQEPTRNALAELIISFAAEGETNPKRLKELALAALPRTLGTP
Ga0247830_1074847513300033551SoilNFDPETLAILEAAFNEAWEVLMASGGDFDQEATRNALADLIMSFAAEGETNPKRLKELALSALPRTLGAP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.