Metagenome / Metatranscriptome Family F044665

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Overview

Basic Information
Family ID	F044665
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	91 residues
Representative Sequence	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG
Number of Associated Samples	111
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.32 %
% of genes near scaffold ends (potentially truncated)	33.12 %
% of genes from short scaffolds (< 2000 bps)	81.17 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.948 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.831 % of family members)
Environment Ontology (ENVO)	Unclassified (64.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.831 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.82% β-sheet: 0.00% Coil/Unstructured: 41.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00106	adh_short	35.71
PF13561	adh_short_C2	9.74
PF05170	AsmA	5.84
PF12831	FAD_oxidored	1.95
PF00227	Proteasome	1.95
PF07730	HisKA_3	1.30
PF01229	Glyco_hydro_39	1.30
PF01804	Penicil_amidase	0.65
PF00027	cNMP_binding	0.65
PF00873	ACR_tran	0.65
PF04362	Iron_traffic	0.65
PF07690	MFS_1	0.65
PF07715	Plug	0.65
PF08212	Lipocalin_2	0.65
PF00266	Aminotran_5	0.65
PF07687	M20_dimer	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	5.84
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	1.95
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	1.95
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	1.95
COG2924	Fe-S cluster biosynthesis and repair protein YggX	Posttranslational modification, protein turnover, chaperones [O]	1.30
COG3664	Beta-xylosidase	Carbohydrate transport and metabolism [G]	1.30
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.30
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.30
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.30
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.30
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.65
COG3040	Bacterial lipocalin Blc	Cell wall/membrane/envelope biogenesis [M]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.60 %
Unclassified	root	N/A	47.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.60 %
Unclassified	root	N/A	47.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.95 %
Unclassified	root	N/A	47.40 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.22 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.44 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.30 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	8.44 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.30 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.65 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.30 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	1.30 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	1.30 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8.44 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1.30 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	0.65 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100657806	Not Available	925	Open in IMG/M
3300003316\|rootH1_10148744	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300003320\|rootH2_10148629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2635	Open in IMG/M
3300005260\|Ga0074072_1000220	All Organisms → cellular organisms → Bacteria → Proteobacteria	36396	Open in IMG/M
3300005327\|Ga0070658_10972815	Not Available	738	Open in IMG/M
3300005331\|Ga0070670_100325739	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300005331\|Ga0070670_100462448	Not Available	1125	Open in IMG/M
3300005332\|Ga0066388_102936626	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300005335\|Ga0070666_10037399	All Organisms → cellular organisms → Bacteria	3226	Open in IMG/M
3300005335\|Ga0070666_10195978	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300005337\|Ga0070682_100881335	Not Available	734	Open in IMG/M
3300005338\|Ga0068868_101184206	Not Available	706	Open in IMG/M
3300005340\|Ga0070689_101485699	Not Available	613	Open in IMG/M
3300005355\|Ga0070671_100253339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1495	Open in IMG/M
3300005355\|Ga0070671_100412674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1156	Open in IMG/M
3300005367\|Ga0070667_100461123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1162	Open in IMG/M
3300005367\|Ga0070667_101318137	Not Available	676	Open in IMG/M
3300005436\|Ga0070713_100654977	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005457\|Ga0070662_100771444	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300005458\|Ga0070681_10830014	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300005529\|Ga0070741_10094256	All Organisms → cellular organisms → Bacteria	3209	Open in IMG/M
3300005535\|Ga0070684_100943951	Not Available	809	Open in IMG/M
3300005538\|Ga0070731_10436272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	871	Open in IMG/M
3300005542\|Ga0070732_10845376	Not Available	559	Open in IMG/M
3300005544\|Ga0070686_101834533	Not Available	517	Open in IMG/M
3300005548\|Ga0070665_100055197	All Organisms → cellular organisms → Bacteria	3984	Open in IMG/M
3300005548\|Ga0070665_100165815	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300005563\|Ga0068855_101929985	Not Available	598	Open in IMG/M
3300005564\|Ga0070664_100606898	Not Available	1015	Open in IMG/M
3300005614\|Ga0068856_102596104	Not Available	513	Open in IMG/M
3300005618\|Ga0068864_100395923	Not Available	1312	Open in IMG/M
3300005834\|Ga0068851_10369975	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005841\|Ga0068863_100042337	All Organisms → cellular organisms → Bacteria	4327	Open in IMG/M
3300005842\|Ga0068858_100020556	All Organisms → cellular organisms → Bacteria → Proteobacteria	6168	Open in IMG/M
3300006173\|Ga0070716_101459700	Not Available	558	Open in IMG/M
3300006893\|Ga0073928_10333939	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300009093\|Ga0105240_11330596	Not Available	757	Open in IMG/M
3300009143\|Ga0099792_10081597	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300009143\|Ga0099792_10753205	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300009174\|Ga0105241_10277336	Not Available	1430	Open in IMG/M
3300009174\|Ga0105241_12115453	Not Available	556	Open in IMG/M
3300009177\|Ga0105248_12131280	Not Available	638	Open in IMG/M
3300009545\|Ga0105237_10053955	All Organisms → cellular organisms → Bacteria	4029	Open in IMG/M
3300009545\|Ga0105237_10434486	Not Available	1318	Open in IMG/M
3300009545\|Ga0105237_10703184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1017	Open in IMG/M
3300009551\|Ga0105238_10452212	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300009551\|Ga0105238_12690020	Not Available	534	Open in IMG/M
3300009553\|Ga0105249_10039093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4307	Open in IMG/M
3300009553\|Ga0105249_12963589	Not Available	545	Open in IMG/M
3300009553\|Ga0105249_12968590	Not Available	545	Open in IMG/M
3300010375\|Ga0105239_10565967	Not Available	1295	Open in IMG/M
3300012207\|Ga0137381_10705414	Not Available	877	Open in IMG/M
3300012210\|Ga0137378_10793095	Not Available	859	Open in IMG/M
3300012359\|Ga0137385_10157752	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300012582\|Ga0137358_10624412	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300012582\|Ga0137358_11057786	Not Available	521	Open in IMG/M
3300012922\|Ga0137394_10508321	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300012923\|Ga0137359_10642236	Not Available	928	Open in IMG/M
3300012924\|Ga0137413_10092311	All Organisms → cellular organisms → Bacteria → Proteobacteria	1868	Open in IMG/M
3300012924\|Ga0137413_10689379	Not Available	774	Open in IMG/M
3300012924\|Ga0137413_10793649	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300012925\|Ga0137419_10589857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	892	Open in IMG/M
3300012927\|Ga0137416_10276154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1383	Open in IMG/M
3300012929\|Ga0137404_11439108	Not Available	637	Open in IMG/M
3300012930\|Ga0137407_10044541	All Organisms → cellular organisms → Bacteria	3565	Open in IMG/M
3300012930\|Ga0137407_10178669	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300012930\|Ga0137407_10800545	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300012930\|Ga0137407_12178435	Not Available	530	Open in IMG/M
3300012944\|Ga0137410_11717551	Not Available	552	Open in IMG/M
3300013306\|Ga0163162_12143882	Not Available	641	Open in IMG/M
3300013307\|Ga0157372_12657332	Not Available	574	Open in IMG/M
3300014168\|Ga0181534_10001005	All Organisms → cellular organisms → Bacteria → Proteobacteria	18993	Open in IMG/M
3300015242\|Ga0137412_10299538	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300015264\|Ga0137403_10061282	All Organisms → cellular organisms → Bacteria → Proteobacteria	3843	Open in IMG/M
3300019270\|Ga0181512_1487516	Not Available	652	Open in IMG/M
3300021168\|Ga0210406_10508164	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300021168\|Ga0210406_10569378	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300021374\|Ga0213881_10519275	Not Available	540	Open in IMG/M
3300022726\|Ga0242654_10213110	Not Available	677	Open in IMG/M
3300022897\|Ga0247764_1135199	Not Available	750	Open in IMG/M
3300022903\|Ga0247774_1029201	Not Available	1437	Open in IMG/M
3300022910\|Ga0247768_1035669	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300023265\|Ga0247780_1171289	Not Available	585	Open in IMG/M
3300023275\|Ga0247776_10113297	Not Available	1048	Open in IMG/M
3300024330\|Ga0137417_1506930	All Organisms → cellular organisms → Bacteria → Proteobacteria	4370	Open in IMG/M
3300025321\|Ga0207656_10224658	Not Available	913	Open in IMG/M
3300025900\|Ga0207710_10447151	Not Available	667	Open in IMG/M
3300025903\|Ga0207680_10543436	Not Available	829	Open in IMG/M
3300025904\|Ga0207647_10065777	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300025911\|Ga0207654_10179327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1381	Open in IMG/M
3300025913\|Ga0207695_10248859	Not Available	1677	Open in IMG/M
3300025924\|Ga0207694_10285039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1357	Open in IMG/M
3300025924\|Ga0207694_10551078	Not Available	968	Open in IMG/M
3300025924\|Ga0207694_11604401	Not Available	548	Open in IMG/M
3300025925\|Ga0207650_10131153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1961	Open in IMG/M
3300025925\|Ga0207650_10468156	Not Available	1050	Open in IMG/M
3300025931\|Ga0207644_10251380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1410	Open in IMG/M
3300025931\|Ga0207644_11354666	Not Available	598	Open in IMG/M
3300025936\|Ga0207670_10944155	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300025939\|Ga0207665_11138547	Not Available	622	Open in IMG/M
3300025941\|Ga0207711_10387400	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300025949\|Ga0207667_11617028	Not Available	616	Open in IMG/M
3300025961\|Ga0207712_10246780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1441	Open in IMG/M
3300025961\|Ga0207712_10605396	Not Available	948	Open in IMG/M
3300025961\|Ga0207712_11958563	Not Available	524	Open in IMG/M
3300025981\|Ga0207640_10516797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	997	Open in IMG/M
3300025986\|Ga0207658_10182520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1738	Open in IMG/M
3300025986\|Ga0207658_10868784	Not Available	820	Open in IMG/M
3300026035\|Ga0207703_10000915	All Organisms → cellular organisms → Bacteria → Proteobacteria	28739	Open in IMG/M
3300026067\|Ga0207678_10038201	All Organisms → cellular organisms → Bacteria → Proteobacteria	4172	Open in IMG/M
3300026088\|Ga0207641_10000546	All Organisms → cellular organisms → Bacteria → Proteobacteria	42187	Open in IMG/M
3300026095\|Ga0207676_10786124	Not Available	928	Open in IMG/M
3300026095\|Ga0207676_11662316	Not Available	637	Open in IMG/M
3300026116\|Ga0207674_10549049	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300026142\|Ga0207698_12189730	Not Available	566	Open in IMG/M
3300026557\|Ga0179587_10682388	Not Available	677	Open in IMG/M
3300026557\|Ga0179587_10809477	Not Available	618	Open in IMG/M
3300027771\|Ga0209279_10187310	Not Available	613	Open in IMG/M
3300027894\|Ga0209068_10418873	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300027903\|Ga0209488_10060196	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300027903\|Ga0209488_10827107	Not Available	654	Open in IMG/M
3300028379\|Ga0268266_10039240	All Organisms → cellular organisms → Bacteria	4033	Open in IMG/M
3300028379\|Ga0268266_10340666	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300028380\|Ga0268265_10452721	Not Available	1199	Open in IMG/M
3300028381\|Ga0268264_11052619	Not Available	821	Open in IMG/M
3300028381\|Ga0268264_11651783	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300028536\|Ga0137415_10000046	All Organisms → cellular organisms → Bacteria → Proteobacteria	89416	Open in IMG/M
3300028536\|Ga0137415_10379111	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300028652\|Ga0302166_10119486	Not Available	598	Open in IMG/M
3300029987\|Ga0311334_11706492	Not Available	536	Open in IMG/M
3300030521\|Ga0307511_10007941	All Organisms → cellular organisms → Bacteria	10645	Open in IMG/M
3300030521\|Ga0307511_10046379	All Organisms → cellular organisms → Bacteria	3575	Open in IMG/M
3300031231\|Ga0170824_111729252	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_114276261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1118	Open in IMG/M
3300031231\|Ga0170824_116067975	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300031231\|Ga0170824_122959857	Not Available	1102	Open in IMG/M
3300031231\|Ga0170824_127370480	Not Available	753	Open in IMG/M
3300031446\|Ga0170820_12830493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1019	Open in IMG/M
3300031446\|Ga0170820_15108041	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300031474\|Ga0170818_107741380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1114	Open in IMG/M
3300031474\|Ga0170818_115574279	Not Available	869	Open in IMG/M
3300031507\|Ga0307509_10003801	All Organisms → cellular organisms → Bacteria → Proteobacteria	22384	Open in IMG/M
3300031507\|Ga0307509_10935049	Not Available	532	Open in IMG/M
3300031715\|Ga0307476_10131991	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300031726\|Ga0302321_100132902	All Organisms → cellular organisms → Bacteria → Proteobacteria	2535	Open in IMG/M
3300031962\|Ga0307479_10024424	All Organisms → cellular organisms → Bacteria → Proteobacteria	5725	Open in IMG/M
3300031962\|Ga0307479_11399959	Not Available	658	Open in IMG/M
3300032828\|Ga0335080_10236175	All Organisms → cellular organisms → Bacteria → Proteobacteria	2001	Open in IMG/M
3300032955\|Ga0335076_10217676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1809	Open in IMG/M
3300032955\|Ga0335076_10267703	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1602	Open in IMG/M
3300033179\|Ga0307507_10492622	Not Available	663	Open in IMG/M
3300033180\|Ga0307510_10000100	All Organisms → cellular organisms → Bacteria → Proteobacteria	66675	Open in IMG/M
3300033180\|Ga0307510_10011142	All Organisms → cellular organisms → Bacteria	10689	Open in IMG/M
3300034384\|Ga0372946_0326387	Not Available	744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.00%
Host-Associated	Host-Associated	50.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	46.75%
Aquatic	Environmental → Aquatic	3.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.64%
Roots	Host-Associated → Plants → Roots	4.55%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.25%
Peat	Environmental → Terrestrial → Peat	1.95%
Freshwater	Environmental → Aquatic → Freshwater	1.30%
Rhizome	Host-Associated → Plants → Rhizome	1.30%
Marine	Environmental → Aquatic → Marine	0.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.30%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.30%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	12.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.84%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	4.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.95%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.30%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.65%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.65%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1006578062	3300002245	Forest Soil	MTWIFWAVMLITHGALSRWAKGSRFFAPASVIADGILIAIALITVDQLQGLGIMDVLRIGAFFIAFGTAGRQLMHSLLSRFPGTPPPRAGSSI*
rootH1_101487442	3300003316	Sugarcane Root And Bulk Soil	MTTWIVWAVLLLAHGALSRWAKSSRFFAPASIVADGILIAIALITMEQLQDLQVLEVGRIGVFFIAFGTAGRQLMNSILSRFPAKATSV*
rootH2_101486292	3300003320	Sugarcane Root And Bulk Soil	MTTWIVWAVLLLAHGALSRWAKSSRFFAPASIVADGILIAIALITMEQLQDLQVLEVARIGVFFIAFGTAGRQLMHSILSRFPAKATSV*
Ga0074072_10002203	3300005260	Soil	MTTWILWAVLLLAHGALSRWAKTSRFFAPASIVADGILIAIALITMEQLQDLQVREVARIGVFFIAFGTAGRQLMNSVLTRFPAKAPSA*
Ga0070658_109728152	3300005327	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTAGSA*
Ga0070670_1003257392	3300005331	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTAGSA*
Ga0070670_1004624482	3300005331	Switchgrass Rhizosphere	HGALSRWAKASRFYAPASIIADGILIAIALITVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP*
Ga0066388_1029366261	3300005332	Tropical Forest Soil	MTWILWAMLLLTHGALSRWAKGSRFFAPAMIIADGVLIAIALITLDQLQGLGVVDVLRVGAFFVAFGTAGRQLMHSVLSRSAAR*
Ga0070666_100373993	3300005335	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP*
Ga0070666_101959782	3300005335	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG*
Ga0070682_1008813351	3300005337	Corn Rhizosphere	HGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG*
Ga0068868_1011842062	3300005338	Miscanthus Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0070689_1014856992	3300005340	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALMTVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHS
Ga0070671_1002533391	3300005355	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPTPRADSI*
Ga0070671_1004126742	3300005355	Switchgrass Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTTGSA*
Ga0070667_1004611231	3300005367	Switchgrass Rhizosphere	MTTWILWAVLLLAHGALTRWAKGSSRYFATASMVADGILIAIALITMEQLQDLEVHEVLRIGVFFIAFGTAGRRLMDSVLTRFPDKARSA*
Ga0070667_1013181371	3300005367	Switchgrass Rhizosphere	QAGPPPRQSESPAIPFDATADRNLFETPVMTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0070713_1006549772	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PRDNIVMSWMVWAVLLVTHGALSRFAKGSYFLSPTALIADGILIAIALFTIDQLQGLHLDEVLRIGIFFVAFGTAGWQLMHSVLKRSTATPPPRVGRA*
Ga0070662_1007714442	3300005457	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG*
Ga0070681_108300141	3300005458	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPT
Ga0070741_100942563	3300005529	Surface Soil	MTWIFWAVLLLSHGALSRWAKGSNFFALASIVADGILIAVALITVDQLQGLGWLDVLRVGVFFVAFGTAGRQLMHSVLARRGAPQARS*
Ga0070684_1009439512	3300005535	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0070731_104362722	3300005538	Surface Soil	MTWIFWAVLLITHGALSRWAKGSRFYAPASVVTDGMLIAIALITVDQLQGLGLLDVLRIGVFFIAFGTAGRQLMHSV
Ga0070732_108453761	3300005542	Surface Soil	MNWIFWAVLLLTHGALSRWAKGSRFYASASVVADGILIAIALITVDQLQGLGLLDMLRIGVFFIAFGTAGRQLMHSVLTRFPGTALPFTDSV
Ga0070686_1018345332	3300005544	Switchgrass Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVL
Ga0070665_1000551973	3300005548	Switchgrass Rhizosphere	MTTWTVWAVLLLTHGALSRWARESRFFAMASMAADGILIAIALITMDQLQDLKVLEVARIGVFFIAFGTAGRQLMNSVLTRFPAGAPPSAGSA*
Ga0070665_1001658153	3300005548	Switchgrass Rhizosphere	MTTWILWAVLLLVHGALSRWAKGSRFYAPASIVCDGILIAIALITMEQLEDLQVLEVMRIGVFFIAFGTAGRQLMDSVLSRFPAKARSI*
Ga0068855_1019299852	3300005563	Corn Rhizosphere	SESPAIPFDATADRNLFETLVMTTWIVWAVLLLTHGALSRWARGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0070664_1006068982	3300005564	Corn Rhizosphere	MTTWIVWAVLLLTHGALSRWARGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG*
Ga0068856_1025961041	3300005614	Corn Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTTGSA*
Ga0068864_1003959231	3300005618	Switchgrass Rhizosphere	QSESPAIPFDATADRNLFETPVMTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG*
Ga0068851_103699752	3300005834	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG*
Ga0068863_1000423374	3300005841	Switchgrass Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG*
Ga0068858_1000205568	3300005842	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG*
Ga0070716_1014597001	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAGSA*
Ga0073928_103339392	3300006893	Iron-Sulfur Acid Spring	MLLALLAESLDCENLMTWIVWAVLLLVHGALSRWAKGSRFYAPASIVADGILIAIGLITLEQLQDLALPDVLRIGVFFIAFGTAGRQLMNSVLSRETGNPPPSAGSI*
Ga0105240_113305962	3300009093	Corn Rhizosphere	MTWIFWAALLLTHGALSRWTKGLRYHRKFGRFFAPAAIVADGILIAVALITVDQLQGLSVADFVRVGIFFVAFGTAGRQLMDSVLSRSRATP*
Ga0099792_100815972	3300009143	Vadose Zone Soil	MTWFFWAVLLITHGAISRWAKASRFYAPASVIADGILIAIALITVDQLQGLGTLDYLRIGVFFIAFGTAGRQLMHSLLSRYAAAPPPPGAGSI*
Ga0099792_107532051	3300009143	Vadose Zone Soil	MTWIFWAVMLITHGALSRWAKGSRFFAPASVIADGILIAIALITVDQLQGLGMLDMLRIGAFFIAFGTAGRQLMHSLL
Ga0105241_102773362	3300009174	Corn Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0105241_121154531	3300009174	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVHEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0105248_121312801	3300009177	Switchgrass Rhizosphere	MTTWILWAVLLLAHGALTRWAKWSPRYFATASMVADGILIAIALITMEQLQDLEVHEVLRIGVFFIAFGTAGRRLMDSVLTRFPDKARSA*
Ga0105237_100539553	3300009545	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVAEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG*
Ga0105237_104344862	3300009545	Corn Rhizosphere	MATSPDYIAGQTFLKRASMIWTVWAVLLLTHGALSRWAKGSRFFAPASVVADGILIAIALITMEQLQDLRVLEVARIGVFFIAFGTAGRQLMNSVLTRFASATRGAGPV*
Ga0105237_107031841	3300009545	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKF
Ga0105238_104522122	3300009551	Corn Rhizosphere	MATSPDYIAGQTFLERASMIWTVWAVLLLTHGALSRWAKGSRFFAPASVVADGILIAIALITMEQLQDLRVLEVARIGVFFIAFGTAGRQLMNSVLTRFASATRGAGPV*
Ga0105238_126900201	3300009551	Corn Rhizosphere	ESPAIPFDATADRNLFETPVMTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTAGSA*
Ga0105249_100390935	3300009553	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVDRLQGLGIPDILRIGAFFIALGTAGRQLMHSLLARYAPLRP*
Ga0105249_129635891	3300009553	Switchgrass Rhizosphere	SRDTVMTTWILWAVLLLTHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0105249_129685901	3300009553	Switchgrass Rhizosphere	LTHGALSRWAKASRFYAPASIIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPTPRADSI*
Ga0105239_105659672	3300010375	Corn Rhizosphere	FDATADRNLFETPVMTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLQVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGTPPTAGSV*
Ga0137381_107054142	3300012207	Vadose Zone Soil	MTWIFWAVMLITHGALSRWAKGSRFYAPASVVADGILIAIALITVDQLQGLGILDVLRIGVFFIAFGTAGRQLMHSLLSRYPGNPPPRTGSI*
Ga0137378_107930952	3300012210	Vadose Zone Soil	MTWILWAVLLITHGALSRWAKDSRFYAAASAVADGILIAIALITVEQLQGLGLLDVLRIGVFFIAFGTAGRQLMHSVLSRFPGISPPNAGSI*
Ga0137385_101577523	3300012359	Vadose Zone Soil	MTWILWAVLLITHGALSRWAKASRFYAPASVIADGMLIAIALVTVDQLQGLGFLDVLRIGVFFIAFGTAGRQLMQSVLARYPGTAAQSTDSI*
Ga0137358_106244122	3300012582	Vadose Zone Soil	MTWIFWAVLLITHGALSRWAKGSRFFAPASVIADGILIAIALITVDQLQGLATLDVLRIGVFFIAFGTAGRQLMHSLLSRFP
Ga0137358_110577861	3300012582	Vadose Zone Soil	MTWILWAVMLITHGALSRWAKGSRFYAPASVFADGILIAIALITVDRLQGLGVLDVLRIGVFFIAFGTAGRQLMHSVLSRGASRTSA*
Ga0137394_105083212	3300012922	Vadose Zone Soil	MTWFFWAVLLITHGAISRWAKASRFYAPASVIADGILIAIALITVDQLQGLGTLDYLRIGVFFIAFGTAGRQLMHSLLSRFPSAPPPPAPHA*
Ga0137359_106422361	3300012923	Vadose Zone Soil	MTWIFWAVLLITHGALSRWAKASRFYAPASVIADGILIAIALITVDQLQGLGILDVLRIGVFFIAFGTAGRQLMHSLLSRYAAAQPPPRAGSI*
Ga0137413_100923113	3300012924	Vadose Zone Soil	MTWTLWAVLLLTHGALSRWAKSSRFFAPASIVADGILIAIALITMEQLQDLEVLEVARIGVFFIAFGTAGRQLMNSVLNRFPAGTPPSAGPV*
Ga0137413_106893792	3300012924	Vadose Zone Soil	MTWTLWAVLLLVHGALSRWAKGSRFHAPASIVADGILIAIALITMDQLQDLNVLEVLRIGVFFVAFGTAGRQLMHSVLTRFPEGPPPNAGSI*
Ga0137413_107936491	3300012924	Vadose Zone Soil	MTWLFWAVLLITHGAISRWAKASRFYAPASVIADGILIAIALITVDQLQGLGTLDYLRIGVFFIAFGTAGRQLMHSLLSRFPSAPPPPAPHA*
Ga0137419_105898572	3300012925	Vadose Zone Soil	MTWTLWAVLLLVHGALSRWAKGSRFHAPASIVADGILIAIALITMDQLQDLKVFEVLRIGVFFVAFGTAGRQLMHSVLTRFPEGPPPNAGSI*
Ga0137416_102761543	3300012927	Vadose Zone Soil	MTWIFWAVLLITHGALSRWAKGSRFYAPASVVADGILIAIALITVDQLQGLGILDMLRIGVFFIAFGTAGRQLMHSLLSRFPGTPPPSAGSI*
Ga0137404_114391081	3300012929	Vadose Zone Soil	MTWILWAVLLLVHGALSRWAKGSRFHAPASIVADGILIAIALITMDQLQDLKVFEVLRIGVFFVAFGTAGRQLMHSVLTRFPEGPPPNAGSI*
Ga0137407_100445412	3300012930	Vadose Zone Soil	MTWIFWAVLLLTHGALSRWAKGSRFYAPASVVADGILIAIALITVNQLQGLGVLDVLRVGVFFVAFGTAGRQLMHSLLNRYPGTPPPRAGSI*
Ga0137407_101786694	3300012930	Vadose Zone Soil	WIFWAVMLITHGALSRWAKGSRFYAPASVVADGILIAIALITVDQLQGLGVLDVLRIGVFFIAFGTAGRQLMHSLLSRHPGNPPPRTGSI*
Ga0137407_108005451	3300012930	Vadose Zone Soil	MTWTLWAVLLLVHGALSRWAKGSRFHAPASIVADGILIAIALITMDQLQDLNVLEVLRIGVFFVAFGTAGRQLMHSVLTRFPEDPPPNAGSI*
Ga0137407_121784352	3300012930	Vadose Zone Soil	MTWILWAVLLINHGALSRWARDSRFYAGASAVADGILIVIALITVEQLQGLGLLDLLRIGVFFVAFGTAGRQLMHSVLSRFPGNSPTNAGSI*
Ga0137410_117175511	3300012944	Vadose Zone Soil	MTWIFWAVMLITHGALSRWAKGSRFYAPASVVADGILIAIALITVDQLQGLGVLDVLRIGVFFIAFGTAGRQLMHSLLSRHPGNPPPRTGSI*
Ga0163162_121438822	3300013306	Switchgrass Rhizosphere	MTWIFWAVLLLTHGALSRWTKGLRYHTKKSRFFTPAAIVADGILIAVALITVDQLQGLGFLDVLRVGIFFIAFGTAGRQLMNSVLSRSRAAS*
Ga0157372_126573321	3300013307	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA*
Ga0181534_1000100511	3300014168	Bog	MTTWILWAVLLLAHGALSRWAKGSRFFAPASVVADGMLIAIALITMEQLQDLQVAEVARIGAFFIAFGTAGRQLMNSVLSRFPERASSV*
Ga0137412_102995382	3300015242	Vadose Zone Soil	MTWLFWAVLLITHGAISRWAKASRFYAPASVIADGILIAIALITVDQLQGLGTLDYLRIGVFFIAFGTAGRQLMHSLLNRFPGTPPPSAGSI*
Ga0137403_100612823	3300015264	Vadose Zone Soil	MTWIFWAVLLLTHGALSRWAKGSRFYAPASVVADGILIAIALITVNQLQGLGVLDVLRIGVFFVAFGTARRQLMHSVLSRYPSTPPPRAGSI*
Ga0181512_14875161	3300019270	Peatland	RFFRETVMTTWILWAVLLLAHGALSRWAKGSRFFAPASVVADGMLIAIALITMEQLQDLQVAEVARIGAFFIAFGTAGRQLMNSVLSRFPERASSV
Ga0210406_105081642	3300021168	Soil	MTWIVWAVLLLVHGALSRWAKGSRFYAPASIVADGILIAIALITMEQLQDLAVLDVLRIGVFFVAFGTAGRQLMNSVLSRETGNPPPSAGSI
Ga0210406_105693782	3300021168	Soil	MTWILWAVLLLAHGALSRWAKGSRFYAPASIVADGMLIAIGLITVEQLQDLALLDVLRVGVFFVAFGTAGRQLMNSVLSREGDGPPPNAGSV
Ga0213881_105192751	3300021374	Exposed Rock	WAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLQVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGTPPTARSL
Ga0242654_102131101	3300022726	Soil	ENLMTWTVWAVLLLVHGALSRWAKGSRFYAPASIVADGILIAIALITMEQLQDLAVLDVLRIGVFFVAFGTAGRQLMNSVLSRETGNPPPSAGSI
Ga0247764_11351992	3300022897	Plant Litter	MTTWIVWAVLLLTHGAISRWAKASRFYAPASIVADGILIAIALITMDQLQDLQVSEVMRIGIFFIAFGTAGRQLMHSVLSRYPAKMGPV
Ga0247774_10292013	3300022903	Plant Litter	MTTWIVWAVLLLSHGAISRWAKASRFYAPASIVADGILIAIALITMEQLQDLQVTQVVRIGIFFIAFGTAGRQLMHSVLSRFPAKMGPV
Ga0247768_10356691	3300022910	Plant Litter	RPTIAGRPFLRDLPMTTWIVWAVLLLSHGAISRWAKASRFYAPASIVADGILIAIALITMEQLQDLQVTQVVRIGIFFIAFGTAGRQLMHSVLSRFPAKMGPV
Ga0247780_11712891	3300023265	Plant Litter	PSREIVMTTWILWAVLLLAHGALSRWAKASRFFATASIVADGMLIAIALITMEQLQDLQVAEVARIGVFFIAFGTAGRQLMGSVLSRFPAKSPSSV
Ga0247776_101132972	3300023275	Plant Litter	MTTWIVWAVLLLTHGAISRWAKASRFYAPASIIADGILIAIALITMEQLQDLQVTEVVRIGIFFIAFGTAGRQLMHSVLSRFPAKMGPV
Ga0137417_15069302	3300024330	Vadose Zone Soil	MTWIFWAVMLITHGALSRWAKASRFYAPASVIADGILIAIALITVDQLQGLGVLDVLRIGVFFIAFGTAGRQLMHSVLSRGASRTSA
Ga0207656_102246582	3300025321	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLRVIEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA
Ga0207710_104471512	3300025900	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPTPRADSI
Ga0207680_105434361	3300025903	Switchgrass Rhizosphere	AGPPVRIAVMTTWIVWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0207647_100657773	3300025904	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0207654_101793272	3300025911	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA
Ga0207695_102488592	3300025913	Corn Rhizosphere	MTTWILWAVLLLVHGALSRWAKGSRFYAPASIVCDGILIAIALITMEQLEDLQVLEVMRIGVFFIAFGTAGRQLMDSVLSRFPAKARSI
Ga0207694_102850392	3300025924	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLM
Ga0207694_105510781	3300025924	Corn Rhizosphere	DTVMTTWILWAVLLLTHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA
Ga0207694_116044011	3300025924	Corn Rhizosphere	MIWTVWAVLLLTHGALSRWAKGSRFFAPASVVADGILIAIALITMEQLQDLRVLEVARIGVFFIAFGTAGRQLMNSVLTRFASATRGAGPV
Ga0207650_101311532	3300025925	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0207650_104681561	3300025925	Switchgrass Rhizosphere	HGALSRWAKASRFYAPASIIADGILIAIALITVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP
Ga0207644_102513802	3300025931	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASMIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPTPRADSI
Ga0207644_113546661	3300025931	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWARGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKF
Ga0207670_109441552	3300025936	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALMTVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP
Ga0207665_111385472	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAGSA
Ga0207711_103874002	3300025941	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP
Ga0207667_116170281	3300025949	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA
Ga0207712_102467801	3300025961	Switchgrass Rhizosphere	THGALSRWAKASRFYAPASIIADGILIAIALITVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP
Ga0207712_106053964	3300025961	Switchgrass Rhizosphere	LTHGALSRWAKASRFYAPASIIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPTPRADSI
Ga0207712_119585631	3300025961	Switchgrass Rhizosphere	VMTTWILWAVLLLTHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAPPTTGSA
Ga0207640_105167971	3300025981	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGAR
Ga0207658_101825202	3300025986	Switchgrass Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTAGSA
Ga0207658_108687841	3300025986	Switchgrass Rhizosphere	LTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0207703_1000091517	3300026035	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG
Ga0207678_100382014	3300026067	Corn Rhizosphere	MTTWIVWAVLLLTHGALSRWARGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0207641_1000054633	3300026088	Switchgrass Rhizosphere	MTTWILWAVLLLTHGALSRWAKGSRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG
Ga0207676_107861241	3300026095	Switchgrass Rhizosphere	LLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGARPTAG
Ga0207676_116623162	3300026095	Switchgrass Rhizosphere	MTTWILWAVLLLVHGALSRWAKGSRFYAPASIVCDGILIAIALITMEQLEDLQVLEVMRIGVFFIAFGTAGRQLMDSVLTRFPAKARSV
Ga0207674_105490492	3300026116	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWARGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTTGSA
Ga0207698_121897302	3300026142	Corn Rhizosphere	MTTWILWAVLLLTHGALSRWAKASRFYAPASIIADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTTRAR
Ga0179587_106823882	3300026557	Vadose Zone Soil	MTWILWAVLLLVHGALSRWAKGSRFYAPASIVADGILIAIALITMEQLQDLVLLDVLRIGVFFVAFGTAGRQLMNSVLSRDTGNPPPSAGSI
Ga0179587_108094771	3300026557	Vadose Zone Soil	MTWIFWAVLLITHGALSRWAKGSRFYASASAVADGILIAIALITVDQLQGLGLLDVLRVGIFFVAFGTAGRQLMHSVLARFPGTA
Ga0209279_101873101	3300027771	Marine	MIWTLWAVLLLIHGALSRWAKSSRFFAPASMVADGILIAIALITMEQLEDLKVLEVARIGVFFIAFGTAGRQLMSSVLTRFPAVSTGNTGST
Ga0209068_104188731	3300027894	Watersheds	MTWILWAAMLLTHGALSRWAKGSSFYAPLSIITDGILIAVALITIDQLQGLGLLDTIRIGVFFVAFGTAGRQLMHSVLSRFPT
Ga0209488_100601963	3300027903	Vadose Zone Soil	MTWFFWAVLLITHGAISRWAKASRFYAPASVIADGILIAIALITVDQLQGLGTLDYLRIGVFFIAFGTAGRQLMHSLLSRFPSAPPPPAPHA
Ga0209488_108271072	3300027903	Vadose Zone Soil	MTWIFWAVMLITHGALSRWAKGSRFFAPASVIADGILIAIALITVDQLQGLGMLDMLRIGVFFIAFGTAGRQLMHSLLSRFPGTPPPRAGSLSSTPRPPAS
Ga0268266_100392403	3300028379	Switchgrass Rhizosphere	MTTWTVWAVLLLTHGALSRWARESRFFAMASMAADGILIAIALITMDQLQDLKVLEVARIGVFFIAFGTAGRQLMNSVLTRFPAGAPPSAGSA
Ga0268266_103406662	3300028379	Switchgrass Rhizosphere	MTTWIVWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPTGAPPTAGSA
Ga0268265_104527212	3300028380	Switchgrass Rhizosphere	ENSVQAGSPPRQSESPAIPFDATADRNLFETPVMTTWILWAVLLLTHGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLRVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPAGARPTAG
Ga0268264_110526191	3300028381	Switchgrass Rhizosphere	ALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVEQLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPTPRADSI
Ga0268264_116517832	3300028381	Switchgrass Rhizosphere	MTWILWAALLLTHGALSRWAKASRFYAPASIIADGILIAIALITVDRLQGLGIPDILRIGAFFIAFGTAGRQLMHSLLARYAPLRP
Ga0137415_1000004644	3300028536	Vadose Zone Soil	MTWTLWAVLLLVHGALSRWAKGSRFHAPASIVADGILIAIALITMDQLQDLKVFEVLRIGVFFVAFGTAGRQLMHSVLTRFPEGPPPNAGSI
Ga0137415_103791113	3300028536	Vadose Zone Soil	MTWIFWAVLLITHGALSRWAKGSRFYAPASVVADGILIAIALITVDQLQGLGILDMLRIGVFFIAFGTAGRQLMHSL
Ga0302166_101194862	3300028652	Fen	MIGWYPPLARETLMTTWILWAVLLLAHGAISRWAKGSRFYAAASIATDGILIAIALITLDQLQDLEVLGVLRIGVFFVAFGTAGRQLMHSVLSRFPAGTPPRARSI
Ga0311334_117064921	3300029987	Fen	GALSRWAKGSSFYAPLSIVTDGILIAVALITIDQIQGLGLLDTLRIGVFFIAFGTAGRQLMHSVLSRFPTGTPPSSAGSI
Ga0307511_100079413	3300030521	Ectomycorrhiza	MTWILWAVLLITHGALSRWAKDSPFYAGASAVADGILIAIGLITVEQLQGLGLVDVLRIGVFFIAFGTAGRQLMHSVLCRFPGNSPPNAGPI
Ga0307511_100463793	3300030521	Ectomycorrhiza	MTWTLWAVLLLIHGALSRWAKASRFYAPASIVADGILIAIALITMDQLQDLDVREVLRVGVFFIAFGTAGRQLMHSVLARFPEGTPPNAGSV
Ga0170824_1117292521	3300031231	Forest Soil	MTWIFWAVLLITHGALSRWAKGSRFYVEASVVADGILIAIALITLDQLQGLGLLDVLRIGVFFVAFGTAGRQLMNSVLARFPGTALPRTDSV
Ga0170824_1142762611	3300031231	Forest Soil	HGALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLDVREVLRVGVFFIAFGTAGRQLMHSVLARFPDGTPPNADSV
Ga0170824_1160679752	3300031231	Forest Soil	MTWILWAVLLLTHGALCRWAQGSHFYAPASIVADGILIAIGLITLEQLQDLPLADVLRVGVFFIAFGTAGRQLMNSVLRRESGAPPPSAGSI
Ga0170824_1229598572	3300031231	Forest Soil	DRETEMTWILWAVLLLAHGALSRWAKDSRFYAPASIVADGMLIAIGLITVEQLQDLAPLDVLRVGVFFVAFGTAGRQLMNSVLSREGNGPPPNTGSV
Ga0170824_1273704802	3300031231	Forest Soil	MTTWILWAVLLLAHGALTRWAKGSSRHFAAASMVADGILIAIALITMEQLQDLEVHEVLRIGVFFIAFGTAGRRLMDSVLTRFPDKARSA
Ga0170820_128304931	3300031446	Forest Soil	MTWILWAVLLLTHGALSRWAQGSHFYAPASIVADGILIAIGLITLEQLQDLPLADVLRVGVFFIAFGTAGRQLMNSVLRRESGAPPPSAGSI
Ga0170820_151080413	3300031446	Forest Soil	MTWIFWAVLLITHGALSRWAKGSRFYVEASVVADGILIAIALITLDQLQGLGLLDVLRIGVFFVAFGTAGRQLMNSVLARFPGT
Ga0170818_1077413801	3300031474	Forest Soil	ALSRWAKGSRFYAPASIVADGILIAIALITMDQLQDLDVREVLRVGVFFIAFGTAGRQLMHSVLARFPDGTPPNADSV
Ga0170818_1155742791	3300031474	Forest Soil	ETEMTWILWAVLLLAHGALSRWAKDSRFYAPASIVADGMLIAIGLITVEQLQDLAPLDVLRVGVFFVAFGTAGRQLMNSVLSREGNGPPPNTGSV
Ga0307509_100038018	3300031507	Ectomycorrhiza	MTWILWAMLLTTHGALSRWARGSRFYAPASIVTDGILIAVALITVDQLQGLGILDVLRIGVFFIAFGTAGSQLMHSVLSRSSQASPPGAGQV
Ga0307509_109350491	3300031507	Ectomycorrhiza	MTWILWAVLLTTHGALSRWARGSRFYAPASIVTDGILIAVALITVDQLQGLGILDVLRIGVFFVAFGTAGSQLMRSVLSRASQASPPGAGQV
Ga0307476_101319912	3300031715	Hardwood Forest Soil	MTWFVWALMLITHGAVSRWAQSERAYALVSVLADCLLIAIAAITVEQLQELRALEVLRIGLFFIAFGTAGRQLASALLMAPGTRRAG
Ga0302321_1001329021	3300031726	Fen	GWYPPLARETLMTTWILWAVLLLAHGAISRWAKGSRFYAAASIATDGILIAIALITLDQLQDLEVLGVLRIGVFFVAFGTAGRQLMHSVLSRFPAGTPPRARSI
Ga0307479_100244243	3300031962	Hardwood Forest Soil	MTWIFWAVLLISHGALSRWAKGSRFYAPASVVADGILIAIALITVDQLQGLGLLDVLRIGVFFIAFGTAGRQLTHSLLARFPDSAPPRTGSI
Ga0307479_113999591	3300031962	Hardwood Forest Soil	GGSIYLTMLPSGPVQGKPRMTWIFWAVLLLSHGALSRWAKGSSFYAPAATVADGILIAIALITIDQLQGLGFLDILRVGVFFVAFGTAGRYLMNSVLSRRRSTT
Ga0335080_102361753	3300032828	Soil	MTWILWAVLLLTHGALSRWAKGSRFYAPVSVIADGILIAVALITVDQLQGMSLLDALRIGLFFIAFGTAGRQLMNSFLNRFPAAARQGS
Ga0335076_102176762	3300032955	Soil	MTWILWALLLLTHGALSRWAKGSRFYAPVSVIADGILIAVALITVDQLQGMSLLDALRIGLFFIAFGTAGRQLMNSFLNRFPAAARQGS
Ga0335076_102677033	3300032955	Soil	MTWILWAVLLLAHGALSRWAKGSRFYAPVSVIADGILIAIALITLDQLQGMTVLDTLRIGLFFIAFGTAGRQLMHSLLLRGSARPG
Ga0307507_104926221	3300033179	Ectomycorrhiza	MTTWILWAVLLLTHGALSRWAKGSRFFAPASIVADGMLIAIALITMDQLQDLQVLEVLRIGVFFIAFGTAGRQLMNSVLTKFPSATPPTAGSV
Ga0307510_1000010034	3300033180	Ectomycorrhiza	MTTWILWAVLLLAHGALTRWAKGSRYFAAASMVADGILIAIALITMEQLQDLEVHEVLRIGVFFIAFGTAGRRLMDSVLSRFPDKARSA
Ga0307510_100111427	3300033180	Ectomycorrhiza	MTWTLWAVLLLTHGALSRWAKSSRFFAPASIVADGILIAIALITMEQLQDLKVLEVARIGVFFIAFGTAGRQLMNSVLTRFPARTPPSAGPV
Ga0372946_0326387_265_519	3300034384	Soil	MLITHGALSRWAKASRFYAPASVVADGILIAIALMTVDQLQGLGILDMLRIGVFFIAFGTAGRQLMHSLLSRFPGTPPPRTGSI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044665

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences