Metagenome / Metatranscriptome Family F044449

Basic Information
Family ID	F044449
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	37 residues
Representative Sequence	MAEIGEPDRVVRREREPLISPALPVPTPELEPAK
Number of Associated Samples	111
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.94 %
% of genes near scaffold ends (potentially truncated)	29.87 %
% of genes from short scaffolds (< 2000 bps)	63.64 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Bacteria (75.325 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (60.390 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (82.468 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF04134	DCC1-like	14.94
PF00462	Glutaredoxin	10.39
PF11160	Hva1_TUDOR	3.90
PF00106	adh_short	1.95
PF02469	Fasciclin	1.95
PF16156	DUF4864	1.95
PF01408	GFO_IDH_MocA	1.95
PF00089	Trypsin	1.30
PF03350	UPF0114	1.30
PF13365	Trypsin_2	1.30
PF13378	MR_MLE_C	1.30
PF07719	TPR_2	1.30
PF13414	TPR_11	1.30
PF00081	Sod_Fe_N	1.30
PF00528	BPD_transp_1	0.65
PF13343	SBP_bac_6	0.65
PF00885	DMRL_synthase	0.65
PF00209	SNF	0.65
PF07995	GSDH	0.65
PF01784	NIF3	0.65
PF02535	Zip	0.65
PF03713	DUF305	0.65
PF03575	Peptidase_S51	0.65
PF00480	ROK	0.65
PF01726	LexA_DNA_bind	0.65
PF01872	RibD_C	0.65
PF14117	DUF4287	0.65
PF00881	Nitroreductase	0.65
PF08240	ADH_N	0.65
PF00724	Oxidored_FMN	0.65
PF03441	FAD_binding_7	0.65
PF02894	GFO_IDH_MocA_C	0.65
PF01472	PUA	0.65
PF13561	adh_short_C2	0.65
PF00196	GerE	0.65
PF01145	Band_7	0.65
PF03437	BtpA	0.65
PF00581	Rhodanese	0.65
PF00107	ADH_zinc_N	0.65
PF00491	Arginase	0.65
PF00174	Oxidored_molyb	0.65
PF01451	LMWPc	0.65
PF04832	SOUL	0.65
PF02557	VanY	0.65
PF01740	STAS	0.65
PF05163	DinB	0.65
PF05656	DUF805	0.65
PF13377	Peripla_BP_3	0.65
PF00589	Phage_integrase	0.65
PF00005	ABC_tran	0.65
PF00403	HMA	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	14.94
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	1.95
COG2862	Uncharacterized membrane protein YqhA	Function unknown [S]	1.30
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	1.30
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.30
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.65
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.65
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.65
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	0.65
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.65
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.65
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.65
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.65
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.65
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.65
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.65
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.65
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.65
COG0733	Na+-dependent transporter, SNF family	General function prediction only [R]	0.65
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.65
COG0434	Membrane biogenesis protein, BtpA/SgcQ family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.65
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	0.65
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	0.65
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.65
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.65
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.92 %
Unclassified	root	N/A	22.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.27 %
Unclassified	root	N/A	22.08 %
Viruses	superkingdom	All Organisms → Viruses	0.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.32 %
Unclassified	root	N/A	22.08 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.09 %
Unclassified	root	N/A	22.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.95 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.44 %
Unclassified	root	N/A	22.08 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	51.95 %
Unclassified	root	N/A	22.08 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.95 %
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1.95 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	12.99 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.25 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	1.95 %
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1.95 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.95 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae	11.69 %
actinobacterium SCGC AAA023-D18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1.30 %
Actinobacteria bacterium BACL4 MAG-120507-bin0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	1.30 %
Spirotrichea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1.95 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.95 %
actinobacterium acAMD-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	0.65 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	9.74 %
Candidatus Planktophila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	1.30 %
actinobacterium SCGC AAA023-D18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1.30 %
Actinobacteria bacterium BACL4 MAG-120507-bin0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	1.30 %
Stichotrichia	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia	1.95 %
Nibricoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus	1.95 %
Clavibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter	1.95 %
actinobacterium acAMD-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	0.65 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	9.74 %
Candidatus Planktophila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	1.30 %
actinobacterium SCGC AAA023-D18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1.30 %
Actinobacteria bacterium BACL4 MAG-120507-bin0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	1.30 %
Sporadotrichida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	1.95 %
Nibricoccus aquaticus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	1.95 %
unclassified Clavibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter	1.95 %
actinobacterium acAMD-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	0.65 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	9.74 %
Candidatus Planktophila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	1.30 %
actinobacterium SCGC AAA023-D18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1.30 %
Actinobacteria bacterium BACL4 MAG-120507-bin0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	1.30 %
Clavibacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter → Clavibacter sp.	1.95 %
Halteriidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae	1.95 %
Nibricoccus aquaticus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	1.95 %
actinobacterium acAMD-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	0.65 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	9.74 %
Candidatus Planktophila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	1.30 %
actinobacterium SCGC AAA023-D18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1.30 %
Actinobacteria bacterium BACL4 MAG-120507-bin0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	1.30 %
Halteria	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria	1.95 %
Clavibacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter → Clavibacter sp.	1.95 %
Nibricoccus aquaticus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	1.95 %
actinobacterium acAMD-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	0.65 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.08 %
Candidatus Nanopelagicus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	9.74 %
Candidatus Planktophila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	1.30 %
actinobacterium SCGC AAA023-D18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1.30 %
Actinobacteria bacterium BACL4 MAG-120507-bin0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	1.30 %
Halteria grandinella	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella	1.95 %
Clavibacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter → Clavibacter sp.	1.95 %
Nibricoccus aquaticus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	1.95 %
actinobacterium acAMD-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	0.65 %
Chloroflexi bacterium CSP1-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876004\|none_p0472064	Not Available	513	Open in IMG/M
3300000736\|JGI12547J11936_1007612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	2897	Open in IMG/M
3300000736\|JGI12547J11936_1033064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1141	Open in IMG/M
3300000736\|JGI12547J11936_1056014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	784	Open in IMG/M
3300001282\|B570J14230_10178176	Not Available	595	Open in IMG/M
3300001948\|GOS2228_1011308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	1777	Open in IMG/M
3300001968\|GOS2236_1033902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D18	976	Open in IMG/M
3300003388\|JGI25910J50241_10005728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4543	Open in IMG/M
3300003497\|JGI25925J51416_10023859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1794	Open in IMG/M
3300004240\|Ga0007787_10133590	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300004770\|Ga0007804_1067123	Not Available	929	Open in IMG/M
3300005517\|Ga0070374_10003137	Not Available	7466	Open in IMG/M
3300005517\|Ga0070374_10006461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5545	Open in IMG/M
3300005517\|Ga0070374_10016447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3716	Open in IMG/M
3300005517\|Ga0070374_10176370	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005517\|Ga0070374_10199606	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005517\|Ga0070374_10305566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300005517\|Ga0070374_10553270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	572	Open in IMG/M
3300005528\|Ga0068872_10288573	Not Available	913	Open in IMG/M
3300005580\|Ga0049083_10108173	Not Available	961	Open in IMG/M
3300005581\|Ga0049081_10062819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1398	Open in IMG/M
3300005583\|Ga0049085_10005879	All Organisms → cellular organisms → Bacteria	4863	Open in IMG/M
3300005583\|Ga0049085_10029664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2036	Open in IMG/M
3300005583\|Ga0049085_10119325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	901	Open in IMG/M
3300005583\|Ga0049085_10244172	Not Available	589	Open in IMG/M
3300005584\|Ga0049082_10128926	Not Available	882	Open in IMG/M
3300005739\|Ga0076948_1012861	Not Available	1994	Open in IMG/M
3300005805\|Ga0079957_1013647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5973	Open in IMG/M
3300005805\|Ga0079957_1085315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1770	Open in IMG/M
3300005941\|Ga0070743_10100074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	974	Open in IMG/M
3300005990\|Ga0073921_1107144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300006072\|Ga0007881_1166034	Not Available	535	Open in IMG/M
3300006639\|Ga0079301_1219282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300006862\|Ga0079299_1055784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300007516\|Ga0105050_10001812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31424	Open in IMG/M
3300007516\|Ga0105050_10034833	All Organisms → cellular organisms → Bacteria	3967	Open in IMG/M
3300007516\|Ga0105050_10062961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2599	Open in IMG/M
3300007516\|Ga0105050_10066906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2494	Open in IMG/M
3300007516\|Ga0105050_10129573	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300007519\|Ga0105055_10002042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32009	Open in IMG/M
3300007522\|Ga0105053_10137695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2443	Open in IMG/M
3300007544\|Ga0102861_1009656	Not Available	2291	Open in IMG/M
3300007546\|Ga0102874_1132201	Not Available	781	Open in IMG/M
3300007547\|Ga0102875_1152256	Not Available	726	Open in IMG/M
3300007585\|Ga0102916_1010660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2187	Open in IMG/M
3300007590\|Ga0102917_1007637	All Organisms → cellular organisms → Bacteria	3683	Open in IMG/M
3300007603\|Ga0102921_1019667	All Organisms → cellular organisms → Bacteria	2493	Open in IMG/M
3300007621\|Ga0102872_1104605	Not Available	758	Open in IMG/M
3300007629\|Ga0102895_1099570	Not Available	750	Open in IMG/M
3300007634\|Ga0102901_1016913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2110	Open in IMG/M
3300007716\|Ga0102867_1194375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300007972\|Ga0105745_1047082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1174	Open in IMG/M
3300007973\|Ga0105746_1043447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1398	Open in IMG/M
3300008108\|Ga0114341_10036777	All Organisms → cellular organisms → Bacteria	3980	Open in IMG/M
3300008108\|Ga0114341_10070413	Not Available	2204	Open in IMG/M
3300008111\|Ga0114344_1013368	All Organisms → cellular organisms → Bacteria	9618	Open in IMG/M
3300008111\|Ga0114344_1041869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1787	Open in IMG/M
3300008996\|Ga0102831_1057530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1300	Open in IMG/M
3300009057\|Ga0102892_1017427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300009451\|Ga0127402_1002323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6266	Open in IMG/M
3300009684\|Ga0114958_10005382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8669	Open in IMG/M
3300010293\|Ga0116204_1012773	All Organisms → cellular organisms → Bacteria	3664	Open in IMG/M
3300010293\|Ga0116204_1014671	All Organisms → cellular organisms → Bacteria	3353	Open in IMG/M
3300010368\|Ga0129324_10022957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3057	Open in IMG/M
3300011011\|Ga0139556_1004180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2139	Open in IMG/M
3300011246\|Ga0137490_1000307	Not Available	9168	Open in IMG/M
3300011249\|Ga0137489_1007397	Not Available	1803	Open in IMG/M
3300012000\|Ga0119951_1032804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1664	Open in IMG/M
3300013004\|Ga0164293_10175192	Not Available	1571	Open in IMG/M
3300013006\|Ga0164294_10193907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1443	Open in IMG/M
3300013014\|Ga0164295_11472713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300013087\|Ga0163212_1000549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16708	Open in IMG/M
3300013087\|Ga0163212_1010594	All Organisms → cellular organisms → Bacteria	3529	Open in IMG/M
3300013087\|Ga0163212_1023923	Not Available	2184	Open in IMG/M
3300013087\|Ga0163212_1155063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723	Open in IMG/M
3300013087\|Ga0163212_1265473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter → Clavibacter sp.	532	Open in IMG/M
3300013091\|Ga0163210_1311060	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella	553	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10155509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1616	Open in IMG/M
3300013285\|Ga0136642_1000106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51612	Open in IMG/M
3300013285\|Ga0136642_1001751	All Organisms → cellular organisms → Bacteria	9007	Open in IMG/M
3300013285\|Ga0136642_1098004	Not Available	757	Open in IMG/M
3300013285\|Ga0136642_1186224	Not Available	506	Open in IMG/M
3300013286\|Ga0136641_1025348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CSP1-4	1810	Open in IMG/M
3300013372\|Ga0177922_10186768	Not Available	1085	Open in IMG/M
3300014050\|Ga0119952_1013655	All Organisms → cellular organisms → Bacteria	3018	Open in IMG/M
3300014050\|Ga0119952_1036033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1458	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10462760	Not Available	716	Open in IMG/M
3300015196\|Ga0167627_1001287	All Organisms → cellular organisms → Bacteria	14296	Open in IMG/M
3300015196\|Ga0167627_1007466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5222	Open in IMG/M
3300017788\|Ga0169931_10218677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1598	Open in IMG/M
3300018868\|Ga0187844_10150938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1020	Open in IMG/M
3300018868\|Ga0187844_10407170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300019093\|Ga0187843_10153629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	998	Open in IMG/M
3300019096\|Ga0188835_1011758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	743	Open in IMG/M
3300020074\|Ga0194113_10003096	All Organisms → cellular organisms → Bacteria	22386	Open in IMG/M
3300020074\|Ga0194113_10010636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10977	Open in IMG/M
3300020074\|Ga0194113_10014780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAMD-5	8974	Open in IMG/M
3300020074\|Ga0194113_10152569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1917	Open in IMG/M
3300020074\|Ga0194113_10158170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1870	Open in IMG/M
3300020074\|Ga0194113_10251521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1372	Open in IMG/M
3300020109\|Ga0194112_10919883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter → Clavibacter sp.	560	Open in IMG/M
3300020179\|Ga0194134_10023938	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300020190\|Ga0194118_10112393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1653	Open in IMG/M
3300020190\|Ga0194118_10476211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300020197\|Ga0194128_10319993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300020198\|Ga0194120_10301041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL4 MAG-120507-bin0	805	Open in IMG/M
3300020204\|Ga0194116_10299900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → unclassified Clavibacter → Clavibacter sp.	845	Open in IMG/M
3300020220\|Ga0194119_10507033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300020220\|Ga0194119_10781009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300020221\|Ga0194127_10107277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2064	Open in IMG/M
3300021091\|Ga0194133_10531400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300021376\|Ga0194130_10218912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300023184\|Ga0214919_10184287	Not Available	1595	Open in IMG/M
3300024239\|Ga0247724_1002099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3561	Open in IMG/M
3300024856\|Ga0256304_1122998	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella	517	Open in IMG/M
3300025283\|Ga0208048_1000627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18904	Open in IMG/M
3300025283\|Ga0208048_1001433	All Organisms → cellular organisms → Bacteria	12255	Open in IMG/M
3300025356\|Ga0208870_1015793	Not Available	906	Open in IMG/M
3300025413\|Ga0208614_1023003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300025470\|Ga0208389_1089821	Not Available	539	Open in IMG/M
3300027151\|Ga0255063_1003355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	3910	Open in IMG/M
3300027154\|Ga0255111_1097225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	540	Open in IMG/M
3300027287\|Ga0255135_1041444	Not Available	558	Open in IMG/M
3300027295\|Ga0255126_1014451	Not Available	1995	Open in IMG/M
3300027301\|Ga0255127_1081704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	500	Open in IMG/M
3300027329\|Ga0255109_1092616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	629	Open in IMG/M
3300027333\|Ga0255138_1076824	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella	554	Open in IMG/M
3300027335\|Ga0255130_1023473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1242	Open in IMG/M
3300027563\|Ga0209552_1080742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	889	Open in IMG/M
3300027563\|Ga0209552_1179526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	534	Open in IMG/M
3300027581\|Ga0209651_1212111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	502	Open in IMG/M
3300027586\|Ga0208966_1101306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	789	Open in IMG/M
3300027595\|Ga0255122_1084083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	524	Open in IMG/M
3300027627\|Ga0208942_1007799	Not Available	3600	Open in IMG/M
3300027627\|Ga0208942_1036270	Not Available	1552	Open in IMG/M
3300027627\|Ga0208942_1091869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Nibricoccus → Nibricoccus aquaticus	873	Open in IMG/M
3300027642\|Ga0209135_1036490	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300027712\|Ga0209499_1006051	Not Available	6763	Open in IMG/M
3300027732\|Ga0209442_1035380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	2228	Open in IMG/M
3300027744\|Ga0209355_1071913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1622	Open in IMG/M
3300027744\|Ga0209355_1139627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Planktophila	1048	Open in IMG/M
3300027785\|Ga0209246_10021459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2423	Open in IMG/M
3300027785\|Ga0209246_10069509	Not Available	1367	Open in IMG/M
3300027832\|Ga0209491_10026168	All Organisms → cellular organisms → Bacteria	6111	Open in IMG/M
3300027848\|Ga0209390_10119738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2450	Open in IMG/M
3300027848\|Ga0209390_10187118	All Organisms → Viruses → Predicted Viral	1808	Open in IMG/M
3300027892\|Ga0209550_10247079	Not Available	1181	Open in IMG/M
(restricted) 3300027970\|Ga0247837_1313872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	585	Open in IMG/M
3300027976\|Ga0209702_10001565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43438	Open in IMG/M
3300028105\|Ga0255254_1123359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	517	Open in IMG/M
3300029894\|Ga0247028_1000293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21794	Open in IMG/M
3300029912\|Ga0247050_1017095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae	2609	Open in IMG/M
3300032462\|Ga0335396_10079935	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300034073\|Ga0310130_0032652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1598	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.16%
Terrestrial	Environmental → Terrestrial	5.84%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.17%
Marine	Environmental → Aquatic → Marine	12.34%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.60%
Soil	Environmental → Terrestrial → Soil	1.95%
Unclassified	Environmental → Terrestrial → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	37.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	27.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.74%
Ice	Environmental → Aquatic → Freshwater → Ice	9.09%
River	Environmental → Aquatic → Freshwater → River	7.14%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.60%
Coastal	Environmental → Aquatic → Marine → Coastal	1.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.30%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.65%
Sand	Environmental → Terrestrial → Soil → Sand	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.66%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	24.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.44%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	7.79%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	7.14%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.60%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.60%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.95%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.30%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.29%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.69%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.39%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.44%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	7.79%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.79%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.14%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	7.14%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.25%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.60%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	1.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.30%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.30%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	1.30%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	1.30%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.30%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.30%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.30%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.30%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.65%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.65%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.65%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.65%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.65%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.65%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.65%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.65%
Basal Ice	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Basal Ice	0.65%
Cryoconite Hole, Glacier Surface	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Cryoconite Hole, Glacier Surface	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876004	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-0p1-ETM-15m	Environmental	Open in IMG/M
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300001948	Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012	Environmental	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005739	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300005990	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_30-Apr-14	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006862	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007629	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009057	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3	Environmental	Open in IMG/M
3300009451	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 8m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300011246	Glacer surface microbial communities from an Arctic cyroconite hole, Midre Lovenbreen, Svalbard, Norway (Sample 22)	Environmental	Open in IMG/M
3300011249	Basal ice microbial communities from dark ice on Arctic glacier surface, Midre Lovenbreen, Svalbard, Norway (sample 23)	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300013091	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300015196	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2C, Ice surface)	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300019096	Metatranscriptome of marine microbial communities from Baltic Sea - GS676_0p1	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020221	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024239	Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-E	Environmental	Open in IMG/M
3300024856	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025283	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)	Environmental	Open in IMG/M
3300025356	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027151	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_0h	Environmental	Open in IMG/M
3300027154	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027287	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027295	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepA_8d	Environmental	Open in IMG/M
3300027301	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8d	Environmental	Open in IMG/M
3300027329	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8h	Environmental	Open in IMG/M
3300027333	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8d	Environmental	Open in IMG/M
3300027335	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepB_8d	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027595	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8h	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027642	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027970 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5m	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300028105	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029894	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-A1b	Environmental	Open in IMG/M
3300029912	Cryconite microbial communities from ice sheet in Kangerlussuaq, Greenland - KAN_P-A3a	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
none_04720642	2236876004	Marine Estuarine	MAEIGQPERVVRRERENEPTPAPVVAPVSPELEPAQ
JGI12547J11936_10076122	3300000736	Freshwater And Sediment	MAEIGQPDRVVRREREPLISPALPVPTPELEPAK*
JGI12547J11936_10330643	3300000736	Freshwater And Sediment	MAEIGEPDRVVRRERDPVISPALPVPTPELEPAK*
JGI12547J11936_10560141	3300000736	Freshwater And Sediment	NMAEIGEPDRVVRREREPLISPALPVPTPELEPAK*
B570J14230_101781762	3300001282	Freshwater	MAEIGEPDRVVRRERDPVISPALPTPTPELEPAK*
GOS2228_10113084	3300001948	Marine	MAEIGEPDRIVRREREPNPLTSPALPVVVPELEPASK*
GOS2236_10339021	3300001968	Marine	MAEIGEPERVVRREREPVITPALPTPAPELEPAK*
JGI25910J50241_100057286	3300003388	Freshwater Lake	MKEVVMAEIGEPDRVVRRERELEPAISPASPVITPELEPAGK*
JGI25925J51416_100238592	3300003497	Freshwater Lake	MKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK*
Ga0007787_101335901	3300004240	Freshwater Lake	LRLKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK*
Ga0007804_10671231	3300004770	Freshwater	SEGGVMAEIGEPDHVVRREREGNPGITPAPAKPAQTPEHQPA*
Ga0070374_100031373	3300005517	Freshwater Lake	MSMAEIGEPDRVVRRERDPAINPALPIPVPDLEPAQS*
Ga0070374_100064612	3300005517	Freshwater Lake	VAEIGEPDRVVRREREPAITPSVPAPTPELEPAK*
Ga0070374_100164476	3300005517	Freshwater Lake	MGEIGEPDRVVRRERDPVKTPALPTPVPELEPAQ*
Ga0070374_101763703	3300005517	Freshwater Lake	SNIVAEIGQPERVVRRERENEPALDPVVPLTSPALEPAK*
Ga0070374_101996063	3300005517	Freshwater Lake	AEIGQPERVVRRERENEPALDPVVPLTSPALEPAK*
Ga0070374_103055661	3300005517	Freshwater Lake	MAEIGEPDRVVRREREPAITPSVPAPTPELEPAK*
Ga0070374_105532702	3300005517	Freshwater Lake	MAEIGEPDRVVRREREPLISPALPVPTPELEPAK*
Ga0068872_102885733	3300005528	Freshwater Lake	MAEIGEPDRVVRRERDPVITPALPIPTPELEPAK*
Ga0049083_101081731	3300005580	Freshwater Lentic	TMGEIGEPDRVIRRERDPAIAPAMPVPTPELEPAK*
Ga0049081_100628192	3300005581	Freshwater Lentic	MGEIGEPDRVIRRERDPAIAPAMPVPTPELEPAK*
Ga0049085_100058792	3300005583	Freshwater Lentic	MTEIGQPERVVRREREIEPTPVTPLTAPDLEPAS*
Ga0049085_100296643	3300005583	Freshwater Lentic	MTEIGQPERVVRREREDEPALVPVVPLTSPALEPAP*
Ga0049085_101193251	3300005583	Freshwater Lentic	SNYKQRKNMAEIGQPDRVVRREREPLISPALPVPTPELEPAK*
Ga0049085_102441721	3300005583	Freshwater Lentic	MAEIGEPDRVVRRERDPAINPALPIPVPDLEPAQS*
Ga0049082_101289261	3300005584	Freshwater Lentic	IGQPERVVRRERENEPVPTPVVPATTPALEPAQKI*
Ga0076948_10128613	3300005739	Lake Water	MAEIGEPDRVVRRERDPVITPALPTPTPELEPAK*
Ga0079957_10136478	3300005805	Lake	MAEIGKPDRVIRREREPVISPAVPAPTPELEPSK*
Ga0079957_10853151	3300005805	Lake	MAEIGEPDRVVRRERDPAITPALPTPTPELEPAK*
Ga0070743_101000742	3300005941	Estuarine	MAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK*
Ga0073921_11071443	3300005990	Sand	TMGEIGEPDRVIRRERDPAITPAMPIPTPELEPAK*
Ga0007881_11660341	3300006072	Freshwater	MAEIGEPDHVVRREREGNPGITPAPAKPAQTPEHQPA*
Ga0079301_12192822	3300006639	Deep Subsurface	MAEIGEPDRVVRRERELEPAISPASPVVAPELEPAGK*
Ga0079299_10557842	3300006862	Deep Subsurface	MAEIGEPDRVVRRERDPVITPELPTPTPELEPAK*
Ga0105050_1000181219	3300007516	Freshwater	MRGLTMAEIGEPDRVVRRGREVEPIKVPIVPEPELEPSK*
Ga0105050_100348334	3300007516	Freshwater	MAEIGEPDRVVRREREKDPITVPAIPVPELEPAK*
Ga0105050_100629611	3300007516	Freshwater	MAEIGKPERVVRREREAQPAISPQTPVKQPQPAK*
Ga0105050_100669064	3300007516	Freshwater	MTMAEIGEPDRVVRRERETQPMEVPSLPTPALEPAN*
Ga0105050_101295731	3300007516	Freshwater	DMAEIGKPERVVRREREAQPAISPQTPVKQPQPAK*
Ga0105055_1000204239	3300007519	Freshwater	MAEIGEPDRVVRRERETQPMEVPSVPTPALEPAN*
Ga0105053_101376954	3300007522	Freshwater	MTMAEIGEPDRVVRRERETQPMEVPSVPTPALEPAN*
Ga0102861_10096564	3300007544	Estuarine	MGEIGEPDRVIRRERDPAITPATPVPTPELEPAK*
Ga0102874_11322012	3300007546	Estuarine	MAEIGEPDRVVRRERDPQITPAMPIPTPELEPAK*
Ga0102875_11522562	3300007547	Estuarine	VDKQMAEIGEPDRVVRRERDPQITPAMPIPTPELEPAK*
Ga0102916_10106605	3300007585	Estuarine	MAEIGEPERVVRREREPLISPALPVPTPELEPAK*
Ga0102917_10076377	3300007590	Estuarine	MGEIGEPDRVIRRERDPAITPAMPIPTPELEPAK*
Ga0102921_10196674	3300007603	Estuarine	MAEIGQPERVVRRERENEPTPAPVVAPVSPELEPAQ*
Ga0102872_11046051	3300007621	Estuarine	TMGEIGEPDRVIRRERDPAIAPATPVPTPELEPAK*
Ga0102895_10995703	3300007629	Estuarine	GTRHVREETMGEIGEPDRVIRRERDPAIAPATPVPTPELEPAK*
Ga0102901_10169135	3300007634	Estuarine	MAEIGEPDRVVRREREPVISPALPVPTPELEPAK*
Ga0102867_11943751	3300007716	Estuarine	LGTRHVREETMGEIGEPDRVIRRERDPAIAPATPIPTPELEPAK*
Ga0105745_10470822	3300007972	Estuary Water	MAEIGQPDRVVRREREPLISPALPAPTPELEPAK*
Ga0105746_10434471	3300007973	Estuary Water	NYKQRKNMAEIGQPDRVVRREREPLISPALPVPTPELEPAK*
Ga0114341_100367777	3300008108	Freshwater, Plankton	MAEIGEPDRVVRRERDPQIIPATPIPTPELEPAK*
Ga0114341_100704132	3300008108	Freshwater, Plankton	MAEIGEPERVVRREREPQITPAIPVPTPELEPAK*
Ga0114344_10133688	3300008111	Freshwater, Plankton	MAEIGQPDRVVRREREPLISPALPVPAPELEPAK*
Ga0114344_10418692	3300008111	Freshwater, Plankton	MAEIGKPDRVVRREREPVISPAMPIPTPELEPSK*
Ga0102831_10575301	3300008996	Estuarine	MAEIGEPDRVVRREREPAITPSVPAPTPALEPAK*
Ga0102892_10174273	3300009057	Estuarine	MAEIGEPDRVVRREREPLISPALPVPTPEIEPAK*
Ga0127402_10023237	3300009451	Meromictic Pond	MAEIGQPERVVRRERENQPGLDPVVPLAEPELEPAP*
Ga0114958_100053825	3300009684	Freshwater Lake	MKMAEIGEPDHVVRRERETPGVTPAVPAPNAVPELEPA*
Ga0116204_10127736	3300010293	Anoxic Lake Water	MAEIGKPDRVVRREREPVITPAVPTPAPELEPSK*
Ga0116204_10146718	3300010293	Anoxic Lake Water	MAEIGEPDRVVRRERDPVITPASPAPTPELEPAK*
Ga0129324_100229573	3300010368	Freshwater To Marine Saline Gradient	MGEIGEPDRIVRRERDPITTPALPTPVPELEPAQ*
Ga0139556_10041802	3300011011	Freshwater	MAEIGEPDRVVRREREPAITPNVPAPTPELEPAK*
Ga0137490_10003076	3300011246	Cryoconite Hole, Glacier Surface	MAEIGEPERVVRRERENEPAITPSQPVTTPELEPAK*
Ga0137489_10073973	3300011249	Basal Ice	MAEIGEPERVVRRERENEPAITPTQPVTTPELEPAK*
Ga0119951_10328042	3300012000	Freshwater	MAEIGEPDKVVRREREPAITPSVPAPTPELEPAK*
Ga0164293_101751922	3300013004	Freshwater	MAEIGEPDRIVRREREPLISPAAPIPVPELEPAK*
Ga0164294_101939071	3300013006	Freshwater	LYKFKKKGAVVAEIGEPDRVVRREREPAITPSVPAPTLELEPAK*
Ga0164295_114727133	3300013014	Freshwater	QVREETMGEIGEPDRVIRRERDPAIAPAMPVPTPELEPAK*
Ga0163212_100054917	3300013087	Freshwater	MAEIGEPDRVVRRERELEPAIHPTTPVVTPELEPAGK*
Ga0163212_10105942	3300013087	Freshwater	MAEIGEPDRVVRRERELEPAITPASPIVTPELEPAGK*
Ga0163212_10239232	3300013087	Freshwater	MAEIGKPDRIVRREREIEGTPTPSPSPVVPELEPAEK*
Ga0163212_11550632	3300013087	Freshwater	MKEVVMAEIGEPDRVVRRERELEPAITPASPVVTPELEPAGK*
Ga0163212_12654732	3300013087	Freshwater	MKKVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK*
Ga0163210_13110601	3300013091	Freshwater	MAMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK*
(restricted) Ga0172373_101555092	3300013131	Freshwater	MAEIGEPDRVVRREREPEPAISPASPVVTPELEPAGK*
Ga0136642_100010653	3300013285	Freshwater	MAEIGEPDRVVRRERETQPGALPEKPAVLPLPPEVEPVR*
Ga0136642_10017516	3300013285	Freshwater	MAEIGEPERVVRREREPLPTVAPQVPGVQPLAPELEPA*
Ga0136642_10980042	3300013285	Freshwater	MAEIGEPDRVVRRERETQPLTVPQTPAVQPETPALEPASAQ*
Ga0136642_11862242	3300013285	Freshwater	MAEIGEPDHVVRRERETQPGSVPGQPTVLPATPELEPANYGK*
Ga0136641_10253482	3300013286	Freshwater	MKMAEIGEPDHVVRRERETPVVTPAVPAPNVVPELEPA*
Ga0177922_101867684	3300013372	Freshwater	REKTMGEIGEPDRVIRRERDPAIAPAMPVPTPELEPAK*
Ga0119952_10136554	3300014050	Freshwater	MAEIGEPDKVVRREREPAITSSVPAPTPELEPAK*
Ga0119952_10360332	3300014050	Freshwater	MAEIGEPDRVVRRERVPQIIPATPIPTPELEPAK*
(restricted) Ga0172376_104627602	3300014720	Freshwater	RAKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK*
Ga0167627_100128711	3300015196	Glacier Forefield Soil	MAEIGEPERVVRRERENEPVVTPAQPVTTPELEPAH*
Ga0167627_10074664	3300015196	Glacier Forefield Soil	MAEIGEPERVVRRERENEPAITPTQPVTTPELEPAQ*
Ga0169931_102186772	3300017788	Freshwater	MAEIGEPDRVVRREREPEPAISPASPVVTPELEPAGK
Ga0187844_101509383	3300018868	Freshwater	TLYKFKKGAQMAEIGEPDRVVRREREPAITPSVPVPTPELEPAK
Ga0187844_104071703	3300018868	Freshwater	QVREETMGEIGEPDRVIRRERDPAIAPATPVPTPELEPAK
Ga0187843_101536291	3300019093	Freshwater	ITLYKFKKGAQVAEIGEPDRVVRREREPAITPSVPAPTPELEPAK
Ga0188835_10117581	3300019096	Freshwater Lake	MAEIGEPDRVVRRERELEPAISPPSPVVTPELEPAGK
Ga0194113_100030969	3300020074	Freshwater Lake	MAMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0194113_100106362	3300020074	Freshwater Lake	MAMAEIGEPDRVVRRERELEPAVSPASPVVTPELEPAGK
Ga0194113_100147808	3300020074	Freshwater Lake	MAEIGEPDRVVRREREPEPAISPTSPVVTPELEPAGK
Ga0194113_101525692	3300020074	Freshwater Lake	MAEIGEPDRVVRRERELEPAIHPTTPVVTPELEPAGK
Ga0194113_101581704	3300020074	Freshwater Lake	MAEIGEPDRVVRRERELEPATSPASPVVTPELEPAGK
Ga0194113_102515212	3300020074	Freshwater Lake	MAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0194112_109198832	3300020109	Freshwater Lake	MAEIGEPDRVVRRERELEPAISPASPVVTPELEPA
Ga0194134_100239384	3300020179	Freshwater Lake	VAEIGQPERVVRREREVSPAPIPSEPPVTPELEPAGK
Ga0194118_101123933	3300020190	Freshwater Lake	MAEIGEPDRVVRRERELEPAITPASPVVTPELEPAGK
Ga0194118_104762111	3300020190	Freshwater Lake	LAFYKLRAKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0194128_103199933	3300020197	Freshwater Lake	YKLRMKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0194120_103010412	3300020198	Freshwater Lake	MKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0194116_102999001	3300020204	Freshwater Lake	VKEVVMAEIGEPDRVVRRERELEPATSPASPVVTPELEPAGK
Ga0194119_105070333	3300020220	Freshwater Lake	AFYKLRAKEVVMAEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0194119_107810091	3300020220	Freshwater Lake	MAEIGEPDRVVRRERELEPAISPASPAVTPELEPAGK
Ga0194127_101072771	3300020221	Freshwater Lake	EVVMAEIGEPDRVVRRERELEPAIHPTTPVVTPELEPAGK
Ga0194133_105314002	3300021091	Freshwater Lake	MAEIGEPDRVVRRERELEPVISPASPVVTPELEPAGK
Ga0194130_102189122	3300021376	Freshwater Lake	MKEVVMAEIGEPDRVVRRERELEPAITPASPVVTPELEPAGK
Ga0214919_101842871	3300023184	Freshwater	AAMAEIGEPDKVVRREREPAITPSVPAPTPELEPAK
Ga0247724_10020993	3300024239	Deep Subsurface Sediment	MVMAEIGEPDRVVRRERELEPAISPASPVVAPELEPAGK
Ga0256304_11229982	3300024856	Freshwater	MAEIGEPDRVVRRERELEPAISPASPVITPELEPAGK
Ga0208048_10006272	3300025283	Freshwater	MAEIGKPDRIVRREREIEGTPTPSPSPVVPELEPAEK
Ga0208048_100143312	3300025283	Freshwater	MAEIGEPDRVVRRERELEPAITPASPIVTPELEPAGK
Ga0208870_10157933	3300025356	Freshwater	MAEIGEPDHVVRREREGNPGITPAPAKPAQTPEHQPA
Ga0208614_10230031	3300025413	Freshwater	MAEIGEPDHVVRREREGNPGITPAPAKPAETPEHQPA
Ga0208389_10898211	3300025470	Freshwater	MAEIGEPDHVVRREREGNPGITPAPAKPVQTPEHQPA
Ga0255063_10033553	3300027151	Freshwater	MKEVVMAEIGEPDRVVRRERELEPAISPASPVLEPAGK
Ga0255111_10972251	3300027154	Freshwater	FKMAEIGEPDRVVRREREPLISPALPVPTPELEPAK
Ga0255135_10414442	3300027287	Freshwater	GDGLMAEIGEPDRVVRRERDPQIIPATPIPTPELEPAK
Ga0255126_10144516	3300027295	Freshwater	YKQRKNMAEIGQPDRVVRREREPLISPALPVPTPELEPAK
Ga0255127_10817041	3300027301	Freshwater	KNMAEIGQPDRVVRREREPLISPALPVPTPELEPAK
Ga0255109_10926161	3300027329	Freshwater	GFNMAEIGEPDRVVRREREPLISPALPVPTPELEPAK
Ga0255138_10768242	3300027333	Freshwater	MSEIGEPDRVVRRERELEPAISPASPVVTPELEPAGK
Ga0255130_10234731	3300027335	Freshwater	MKEVVMAEIGEPDRVVRRERELEPAISPASPVITP
Ga0209552_10807423	3300027563	Freshwater Lake	MSMAEIGEPDRVVRRERDPAINPALPIPVPDLEPAQS
Ga0209552_11795262	3300027563	Freshwater Lake	LYKYKKGAQVAEIGEPDRVVRREREPAITPSVPAPTPELEPAK
Ga0209651_12121113	3300027581	Freshwater Lake	EVVMAEIGEPDRVVRRERELEPAISPASPVITPELEPAGK
Ga0208966_11013062	3300027586	Freshwater Lentic	MTEIGQPERVVRREREDEPALVPVVPLTSPALEPAP
Ga0255122_10840831	3300027595	Freshwater	KLGSNVSYYKQRKNMAEIGQPDRVVRREREPLISPALPVPTPELEPAK
Ga0208942_10077993	3300027627	Freshwater Lentic	MTEIGQPERVVRREREIEPTPTPVTPLTAPDLEPAS
Ga0208942_10362702	3300027627	Freshwater Lentic	MAEIGQPERVVRRERENEPATNPGVPLTAPALEPAP
Ga0208942_10918692	3300027627	Freshwater Lentic	MTEIGQPERVVRREREDEPALVPVVPLTLPALEPAP
Ga0209135_10364901	3300027642	Freshwater Lake	TMGEIGEPDRVIRRERDPAIAPAMPVPTPELEPAK
Ga0209499_10060513	3300027712	Freshwater Lake	MKMAEIGEPDHVVRRERETPGVTPAVPAPNAVPELEPA
Ga0209442_10353804	3300027732	Freshwater Lake	KGMSMAEIGEPDRVVRRERDPAINPALPIPVPDLEPAQS
Ga0209355_10719132	3300027744	Freshwater Lake	MAEIGQPERVVRRERENEPTPAPVPLTSPALEPAQ
Ga0209355_11396271	3300027744	Freshwater Lake	KEVVMAEIGEPDRVVRRERELEPAISPASPVITPELEPAGK
Ga0209246_100214594	3300027785	Freshwater Lake	MKEVVMAEIGEPDRVVRRERELEPAISPASPVITPELEPA
Ga0209246_100695091	3300027785	Freshwater Lake	LALNNSRMKEVVMAEIGEPDRVVRRERELEPAISPASPVITPELEPAGK
Ga0209491_100261684	3300027832	Freshwater	MTMAEIGEPDRVVRRERETQPMEVPSLPTPALEPAN
Ga0209390_101197385	3300027848	Freshwater	MTMAEIGEPDRVVRRERETQPMEVPSVPTPALEPAN
Ga0209390_101871183	3300027848	Freshwater	DMAEIGKPERVVRREREAQPAISPQTPVKQPQPAK
Ga0209550_102470794	3300027892	Freshwater Lake	RSNIVAEIGQPERVVRRERENEPALDPVVPLTSPALEPAK
(restricted) Ga0247837_13138721	3300027970	Freshwater	MAEIGEPDRVVRRERELEPAISPATPVVTPELEPAGK
Ga0209702_1000156519	3300027976	Freshwater	MRGLTMAEIGEPDRVVRRGREVEPIKVPIVPEPELEPSK
Ga0255254_11233591	3300028105	Freshwater	FNMAEIGEPDRVVRREREPLISPALPIPTPELEPAK
Ga0247028_10002936	3300029894	Cryconite	MAEIGEPERVVRRERENEPAITPTQPVTTPELEPAK
Ga0247050_10170953	3300029912	Cryconite	MAEIGEPERVVRRERENEPVITPAQPVTTPELEPAH
Ga0335396_100799353	3300032462	Freshwater	GGDMAEIGKPERVVRREREAQPAISPQTPVKQPQPAK
Ga0310130_0032652_1129_1242	3300034073	Fracking Water	MAEIGEPDRVVRRERELEPAISPASPVVAPELEPAGK

Hidden Markov Model


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