Metagenome Family F044102

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044102
Family Type	Metagenome
Number of Sequences	155
Average Sequence Length	41 residues
Representative Sequence	RPNQALERTAARRVFTFQMIKTVSVEAELALGGGRSALSR
Number of Associated Samples	122
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.45 %
% of genes near scaffold ends (potentially truncated)	72.90 %
% of genes from short scaffolds (< 2000 bps)	85.16 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.194 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (30.323 % of family members)
Environment Ontology (ENVO)	Unclassified (37.419 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.839 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.65% β-sheet: 0.00% Coil/Unstructured: 57.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF14534	DUF4440	7.74
PF03544	TonB_C	3.23
PF13302	Acetyltransf_3	2.58
PF12680	SnoaL_2	1.94
PF01872	RibD_C	1.94
PF07883	Cupin_2	1.94
PF00702	Hydrolase	1.94
PF01694	Rhomboid	1.29
PF01663	Phosphodiest	1.29
PF02371	Transposase_20	1.29
PF00903	Glyoxalase	1.29
PF02782	FGGY_C	0.65
PF13495	Phage_int_SAM_4	0.65
PF13673	Acetyltransf_10	0.65
PF01757	Acyl_transf_3	0.65
PF02517	Rce1-like	0.65
PF01965	DJ-1_PfpI	0.65
PF05658	YadA_head	0.65
PF09350	DJC28_CD	0.65
PF12681	Glyoxalase_2	0.65
PF14329	DUF4386	0.65
PF13964	Kelch_6	0.65
PF15580	Imm53	0.65
PF01510	Amidase_2	0.65
PF00202	Aminotran_3	0.65
PF13924	Lipocalin_5	0.65
PF03475	3-alpha	0.65
PF04461	DUF520	0.65
PF01219	DAGK_prokar	0.65
PF12796	Ank_2	0.65
PF02578	Cu-oxidase_4	0.65
PF07653	SH3_2	0.65
PF02423	OCD_Mu_crystall	0.65
PF05222	AlaDh_PNT_N	0.65
PF00583	Acetyltransf_1	0.65
PF00293	NUDIX	0.65
PF07285	DUF1444	0.65
PF13561	adh_short_C2	0.65
PF13091	PLDc_2	0.65
PF07617	DUF1579	0.65
PF10459	Peptidase_S46	0.65
PF13720	Acetyltransf_11	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	3.23
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.94
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.94
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.29
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.29
COG0818	Diacylglycerol kinase	Lipid transport and metabolism [I]	0.65
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG1496	Copper oxidase (laccase) domain	Inorganic ion transport and metabolism [P]	0.65
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	0.65
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.65
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.65
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.65
COG4848	YtpQ protein involved in methylglyoxal resistance, DUF1444/UPF0354 family	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.19 %
Unclassified	root	N/A	25.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.19 %
Unclassified	root	N/A	25.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.19 %
Unclassified	root	N/A	25.81 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	33.55 %
Unclassified	root	N/A	25.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.52 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	32.90 %
Unclassified	root	N/A	25.81 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.87 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.23 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.81 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	25.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.87 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	3.23 %
unclassified Thermoanaerobaculia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia	0.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.65 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.65 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.87 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.23 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	0.65 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.65 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.65 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.87 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.23 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.65 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	0.65 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.87 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.23 %
Luteolibacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter	0.65 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	0.65 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.87 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.23 %
Luteolibacter luteus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter luteus	0.65 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	0.65 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17305261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2567	Open in IMG/M
2166559005\|cont_contig24970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1162	Open in IMG/M
2189573000\|GPBTN7E01ACPZP	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	501	Open in IMG/M
2228664021\|ICCgaii200_c0950274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2413	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105332876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300000890\|JGI11643J12802_10933467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1765	Open in IMG/M
3300000955\|JGI1027J12803_100277195	Not Available	875	Open in IMG/M
3300001545\|JGI12630J15595_10030246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1121	Open in IMG/M
3300004480\|Ga0062592_102547844	Not Available	515	Open in IMG/M
3300005172\|Ga0066683_10502436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300005172\|Ga0066683_10670038	Not Available	619	Open in IMG/M
3300005175\|Ga0066673_10483112	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005178\|Ga0066688_10078154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1981	Open in IMG/M
3300005178\|Ga0066688_10973564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005179\|Ga0066684_10007649	All Organisms → cellular organisms → Bacteria	5025	Open in IMG/M
3300005180\|Ga0066685_10230314	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005180\|Ga0066685_10998455	Not Available	553	Open in IMG/M
3300005186\|Ga0066676_10584914	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005186\|Ga0066676_10845429	Not Available	617	Open in IMG/M
3300005187\|Ga0066675_10917033	Not Available	661	Open in IMG/M
3300005289\|Ga0065704_10033152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	762	Open in IMG/M
3300005289\|Ga0065704_10153320	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005294\|Ga0065705_10284465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1094	Open in IMG/M
3300005367\|Ga0070667_102202342	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	519	Open in IMG/M
3300005439\|Ga0070711_100461182	Not Available	1042	Open in IMG/M
3300005444\|Ga0070694_101919553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	506	Open in IMG/M
3300005445\|Ga0070708_100347440	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300005445\|Ga0070708_100918444	Not Available	822	Open in IMG/M
3300005447\|Ga0066689_10047914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2279	Open in IMG/M
3300005451\|Ga0066681_10626494	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300005451\|Ga0066681_10774826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300005451\|Ga0066681_10789401	Not Available	574	Open in IMG/M
3300005467\|Ga0070706_102107705	Not Available	510	Open in IMG/M
3300005518\|Ga0070699_100967567	Not Available	780	Open in IMG/M
3300005518\|Ga0070699_101622042	Not Available	593	Open in IMG/M
3300005540\|Ga0066697_10211787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300005540\|Ga0066697_10269507	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300005553\|Ga0066695_10481810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300005553\|Ga0066695_10794052	Not Available	547	Open in IMG/M
3300005556\|Ga0066707_10662739	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005566\|Ga0066693_10122804	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005575\|Ga0066702_10341387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	911	Open in IMG/M
3300005576\|Ga0066708_10319374	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300005598\|Ga0066706_11172194	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005598\|Ga0066706_11376107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005617\|Ga0068859_102118965	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005764\|Ga0066903_100084438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4171	Open in IMG/M
3300005921\|Ga0070766_10011975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4469	Open in IMG/M
3300006028\|Ga0070717_10036143	All Organisms → cellular organisms → Bacteria	4004	Open in IMG/M
3300006031\|Ga0066651_10175516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1130	Open in IMG/M
3300006031\|Ga0066651_10530296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	624	Open in IMG/M
3300006032\|Ga0066696_10394367	Not Available	903	Open in IMG/M
3300006034\|Ga0066656_10143832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1486	Open in IMG/M
3300006034\|Ga0066656_11107968	Not Available	509	Open in IMG/M
3300006046\|Ga0066652_101263820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300006173\|Ga0070716_100879211	All Organisms → cellular organisms → Bacteria → PVC group	700	Open in IMG/M
3300006175\|Ga0070712_100367240	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300006175\|Ga0070712_101781821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300006794\|Ga0066658_10205385	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300006797\|Ga0066659_10855161	Not Available	757	Open in IMG/M
3300006797\|Ga0066659_11003934	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300006797\|Ga0066659_11279279	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006797\|Ga0066659_11340325	Not Available	597	Open in IMG/M
3300006800\|Ga0066660_10341948	Not Available	1212	Open in IMG/M
3300006800\|Ga0066660_10715242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	821	Open in IMG/M
3300006800\|Ga0066660_11038488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300006893\|Ga0073928_10216565	Not Available	1487	Open in IMG/M
3300007076\|Ga0075435_100070154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2860	Open in IMG/M
3300009012\|Ga0066710_100255169	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300009012\|Ga0066710_102220998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300009012\|Ga0066710_102817803	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009038\|Ga0099829_10157169	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300009089\|Ga0099828_10079596	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300009137\|Ga0066709_100794280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1371	Open in IMG/M
3300009137\|Ga0066709_102010217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300009137\|Ga0066709_102293198	Not Available	740	Open in IMG/M
3300009137\|Ga0066709_102558349	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009137\|Ga0066709_104389821	Not Available	515	Open in IMG/M
3300010048\|Ga0126373_10294099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1617	Open in IMG/M
3300010322\|Ga0134084_10041376	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300010325\|Ga0134064_10038905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1424	Open in IMG/M
3300010358\|Ga0126370_12554997	Not Available	510	Open in IMG/M
3300010360\|Ga0126372_10881515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	895	Open in IMG/M
3300010376\|Ga0126381_103206506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300012180\|Ga0153974_1057187	Not Available	859	Open in IMG/M
3300012181\|Ga0153922_1052225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	909	Open in IMG/M
3300012198\|Ga0137364_11420773	Not Available	513	Open in IMG/M
3300012199\|Ga0137383_10809718	Not Available	684	Open in IMG/M
3300012200\|Ga0137382_10803676	Not Available	677	Open in IMG/M
3300012202\|Ga0137363_10465850	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012203\|Ga0137399_10000024	All Organisms → cellular organisms → Bacteria	45898	Open in IMG/M
3300012203\|Ga0137399_10227955	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300012211\|Ga0137377_11878074	Not Available	517	Open in IMG/M
3300012285\|Ga0137370_10128105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1452	Open in IMG/M
3300012350\|Ga0137372_10282151	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300012354\|Ga0137366_10797256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012361\|Ga0137360_11134211	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012361\|Ga0137360_11643593	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300012362\|Ga0137361_11040709	Not Available	739	Open in IMG/M
3300012532\|Ga0137373_10575865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300012685\|Ga0137397_10659545	Not Available	778	Open in IMG/M
3300012922\|Ga0137394_11054555	Not Available	674	Open in IMG/M
3300012923\|Ga0137359_10044670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3842	Open in IMG/M
3300012923\|Ga0137359_11569032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300012929\|Ga0137404_10529035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1054	Open in IMG/M
3300012948\|Ga0126375_10552764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	869	Open in IMG/M
3300012986\|Ga0164304_11538221	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012988\|Ga0164306_10812665	Not Available	754	Open in IMG/M
3300012989\|Ga0164305_11807505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	552	Open in IMG/M
3300013102\|Ga0157371_10536192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	867	Open in IMG/M
3300013296\|Ga0157374_11276760	Not Available	756	Open in IMG/M
3300013307\|Ga0157372_12348157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300014154\|Ga0134075_10091377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1282	Open in IMG/M
3300015373\|Ga0132257_101970782	Not Available	753	Open in IMG/M
3300015374\|Ga0132255_101181137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300016341\|Ga0182035_10977740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300018051\|Ga0184620_10015364	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300018058\|Ga0187766_10425501	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300018073\|Ga0184624_10156538	Not Available	1004	Open in IMG/M
3300018073\|Ga0184624_10524854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter luteus	513	Open in IMG/M
3300018433\|Ga0066667_10615746	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300018468\|Ga0066662_12001443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300018482\|Ga0066669_10054217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2554	Open in IMG/M
3300018482\|Ga0066669_11328746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300019879\|Ga0193723_1013579	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300019887\|Ga0193729_1000038	All Organisms → cellular organisms → Bacteria	61204	Open in IMG/M
3300019888\|Ga0193751_1010129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4991	Open in IMG/M
3300020006\|Ga0193735_1023488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1902	Open in IMG/M
3300020006\|Ga0193735_1167522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300021432\|Ga0210384_10004754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15040	Open in IMG/M
3300025910\|Ga0207684_10182062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1812	Open in IMG/M
3300025915\|Ga0207693_11235525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300025929\|Ga0207664_10850423	Not Available	820	Open in IMG/M
3300025986\|Ga0207658_11797504	Not Available	559	Open in IMG/M
3300026342\|Ga0209057_1082220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1359	Open in IMG/M
3300026508\|Ga0257161_1135696	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026527\|Ga0209059_1026769	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300026542\|Ga0209805_1016240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3952	Open in IMG/M
3300026550\|Ga0209474_10151243	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300027727\|Ga0209328_10174807	Not Available	651	Open in IMG/M
3300027875\|Ga0209283_10914615	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300028047\|Ga0209526_10003631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	10506	Open in IMG/M
3300028536\|Ga0137415_11186896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300028536\|Ga0137415_11366517	Not Available	529	Open in IMG/M
3300028716\|Ga0307311_10163949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300028784\|Ga0307282_10544091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300031231\|Ga0170824_112514260	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300031716\|Ga0310813_10251165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1473	Open in IMG/M
3300031753\|Ga0307477_10019041	All Organisms → cellular organisms → Bacteria	4691	Open in IMG/M
3300031820\|Ga0307473_10672662	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031823\|Ga0307478_11201001	Not Available	632	Open in IMG/M
3300031912\|Ga0306921_10145308	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300031962\|Ga0307479_10069789	All Organisms → cellular organisms → Bacteria	3393	Open in IMG/M
3300032180\|Ga0307471_101575576	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300033412\|Ga0310810_10885489	Not Available	787	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.97%
Host-Associated	Host-Associated	8.39%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.39%
Plants	Host-Associated → Plants	7.10%
Aquatic	Environmental → Aquatic	2.58%
Fungi	Host-Associated → Fungi	1.29%
Modeled	Engineered → Modeled	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.87%
Sediment	Environmental → Aquatic → Sediment	1.94%
Mycelium	Host-Associated → Fungi → Mycelium	1.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.84%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.29%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.29%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	38.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.29%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.29%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	30.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.29%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.29%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03538090	2088090014	Soil	SPNIAIPPHDSSNQALERTVTRRVFTCQMIKTVSVEPELALGGGRSAYSR
cont_0970.00001830	2166559005	Simulated	QTLERTAARRTFAFQMNKTVSAQAALDLSGRRSAWSR
N55_09839260	2189573000	Grass Soil	MQGVYFSSAPNQALELTATRRVFTFQMIKRVSIAAELALGGGR
ICCgaii200_09502743	2228664021	Soil	MQGVYFSSAPNQALELTATRRVFTFQMIKRVSIAAELALGSGRSACSR
INPhiseqgaiiFebDRAFT_1053328761	3300000364	Soil	FSKMKSPNQALEATATRRALTFHMAKTVSVGATLALGGGRSALSR*
JGI11643J12802_109334673	3300000890	Soil	MQGVYFSSAPNQALELTATRRVFTFQMIKRVSIAAELALGSGRSACSR*
JGI1027J12803_1002771953	3300000955	Soil	MSDYGSNQALERTAARRTFTFYMIKTFSVAAMLALGGGRSAWSR*
JGI12630J15595_100302463	3300001545	Forest Soil	MILPPNQALERTAARRVFTFQMIKTVPVETALALGGGRSAPSR*
Ga0062592_1025478441	3300004480	Soil	NQIETPNQALELTVTRSVFTFQIIKTVSVEATLALGGGSSAPSR*
Ga0066683_105024362	3300005172	Soil	NDASNQALERTATRRAFTFQMTKTVSVEAKPAEGGSRSALSR*
Ga0066683_106700382	3300005172	Soil	KPSNQALERTATRCVFTFQMIKTVSVEAALASGGGRSAYSR*
Ga0066673_104831123	3300005175	Soil	QKRCGGGTQNDASNQALERTATRRAFTFQMTKTVSVEAKPAEGGSRSAWSR*
Ga0066688_100781543	3300005178	Soil	MSHLYQITPNQSLELTATRRVFTFHMIKTVSVKAELALASGGRSAPSR*
Ga0066688_109735642	3300005178	Soil	MTVPPNTALELTATQHAFTFQMIKTVSVEAELALGGGSSALS
Ga0066684_100076497	3300005179	Soil	MAHQSPNQVLERTAARDTFAFRMIKTVSIAARLVLGGDRSALSS*
Ga0066685_102303143	3300005180	Soil	PNQALERTAARHAFTFQMIKQTSVKAKLPSGGDRSACSR*
Ga0066685_109984551	3300005180	Soil	SNQALELTATRRVFIFHMIKTVSVGPTLALGGVSSALSR*
Ga0066676_105849142	3300005186	Soil	VLVTVGRRPNQTLERTATRRMFTFQMIKTDSAEAKFADGGGRSAWSR*
Ga0066676_108454291	3300005186	Soil	SNQALERTAARRKFTFQMIKTFSDAATLGSSGSRSAFSR*
Ga0066675_109170333	3300005187	Soil	MRPNQALERTATRRAFTFHMIKTVSDEATLASGGGRSAFSR*
Ga0065704_100331522	3300005289	Switchgrass Rhizosphere	MQGVYFSSAPNQALELTAXRRVFTFQMIKRVSIAAELALGGGXSACSR*
Ga0065704_101533201	3300005289	Switchgrass Rhizosphere	YFSSAPNQALELTATRRVFTFQMIKRVSIAAELALGGGR*
Ga0065705_102844652	3300005294	Switchgrass Rhizosphere	VVHHKTPNQTLERTAARRVFTFQMIETVSLEPTLATSVGRSALSR*
Ga0070667_1022023421	3300005367	Switchgrass Rhizosphere	MTATPNQALDRTAARRVFTFQMIKTGSVAATLALGGGRSA
Ga0070711_1004611822	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIATSASNQALERTAARRAFTFQMIKTVSVEAESAVSGGRSAWCR*
Ga0070694_1019195531	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TPNQALERTAARRAFVFQMIMTASVEAELAASGGRSACSR*
Ga0070708_1003474403	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VNTLNRPNQALERTAARRAFTFLLMKTVSPETELALSGGRSA
Ga0070708_1009184441	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQAGDYTSRPNQVLERTAAQRVFTFQMIKTVSVEAMLASSGGRSAYSR*
Ga0066689_100479141	3300005447	Soil	MRPNQALERTATRRMFTFQMIKIVSDKATLALGGGRSACSR*
Ga0066681_106264942	3300005451	Soil	MTIETPNQALERTAARRMFTFHMIKPVSVAPTRTLVDGRSA
Ga0066681_107748261	3300005451	Soil	PNQALERTAARRAFTFQMIETVSVEPEPALGGGRSANSR*
Ga0066681_107894012	3300005451	Soil	SNQALELTATRRVFAFQMIKTVSVEAMLALGGGSLALSR*
Ga0070706_1021077052	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PNQALERTAARRVFTVQMIQTVSVEAMLGLGGGRSACFR*
Ga0070699_1009675672	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RPNQALERTATRRVFTFAMTKTILVEAALALGGGRSACSR*
Ga0070699_1016220422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PNQALERTATRRMFTFQMIKTFSIAAELALSSGRSAWSR*
Ga0066697_102117872	3300005540	Soil	MRCETSENFHNRPNQALERTAARRVLTFQMIKAVSVEAGHVLGGGRSALSR*
Ga0066697_102695072	3300005540	Soil	MISSIADRSNHSLERTAARRVFAFYMIKTISLAGTLALGGGRSAFSR*
Ga0066695_104818101	3300005553	Soil	CGYGRVLVTVGRRPNQTLERTATRRMFIFQMIKTVSAEAKLADGGGSSSFSR*
Ga0066695_107940521	3300005553	Soil	DASNQALERTATRRAFTFQMTKTVSVEPKPAEGGSRSALSR*
Ga0066707_106627392	3300005556	Soil	MPPNQALELTATRRVFTFQMIKTVSVEATLALSGGSSAWSR*
Ga0066693_101228043	3300005566	Soil	VTVGRRPNQTLERTATRRMFTLQMIKTVSAEAKLADGGGRSARSR*
Ga0066702_103413871	3300005575	Soil	KLGKTFSLVSNEPNQALERTAARRAFTFQMIKTVSFEAELAVSDGRSAWSR*
Ga0066708_103193743	3300005576	Soil	LKRTAARRVFTFQMIRTFSVEVALALGGGRSAYSR*
Ga0066706_111721942	3300005598	Soil	MSLATNASNKSLELTATRRESTFQMIKTLSDTATLALGGGSSALSR*
Ga0066706_113761071	3300005598	Soil	NRPNQALERTATRGVFTFQMIKMVSDKATLALGGGRSVCSR*
Ga0068859_1021189652	3300005617	Switchgrass Rhizosphere	PNQALERTAARCVFTFQMIKTVSIAASLALGGGGSAWSR*
Ga0066903_1000844384	3300005764	Tropical Forest Soil	MIDRPNQTLERTAARRAFTFQMIKTVSVEAELALGGGRSASSR*
Ga0070766_100119752	3300005921	Soil	MKNGSNQTLELTATRRAFTFQMIKTLSVAATLAVGGGSSACSR*
Ga0070717_100361438	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MERTAARRVPTFQMIKTFSGKAERALSGGRSAWSR*
Ga0066651_101755161	3300006031	Soil	PNQTLERTAARCAFTFQMIKIASIMTTLALGGGRSACSR*
Ga0066651_105302961	3300006031	Soil	MRPNQTLERTAARCAFTFQMIKTVSLKATRALGGGRSALSR
Ga0066696_103943671	3300006032	Soil	ERTATRRVFTFHMIETVSVEATPALGGARSAPSR*
Ga0066656_101438321	3300006034	Soil	SNQALERTAARRALTIQMIERVSLAATLALGDGRSASSR*
Ga0066656_111079682	3300006034	Soil	HHNASNQALERTATRRAFTFQMIKIVSVEAALALGGGRSAPSR*
Ga0066652_1012638201	3300006046	Soil	GSNQALELTATRRMFTLQMVKTGSMKATLALGGGSSAFSR*
Ga0070716_1008792111	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RPNQALERTTARRAFTFQMIKTILIEATLALGGGRSAYSR*
Ga0070712_1003672403	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGDKTRTMPNQSLELTATRRASTFQMTKTVPVKVMLALGGGRSAGSR*
Ga0070712_1017818212	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QALERTATRRAFMFHLIKTVSVAAMLALGGGRSPYSR*
Ga0066658_102053853	3300006794	Soil	WPNQALERTAARRAFTFNMTKTLPARATPCVAGGRSGWSR*
Ga0066659_108551611	3300006797	Soil	IEEVRPNHALERTATRRMFTFQMIKTASVEATLALAGGRSACSR*
Ga0066659_110039341	3300006797	Soil	MPNQALERTAARRVFTFQVMKTFPNEPTRAPGGGRSA
Ga0066659_112792791	3300006797	Soil	GSNQALELTATRRVFAFQMIKTVSVEAMLALGGGSLALSR*
Ga0066659_113403251	3300006797	Soil	MFTPRDNFTLNGSNQALERTAARRAFTFQMIETVSVAATLALGGGRSACSR*
Ga0066660_103419482	3300006800	Soil	MNRPNQALERTATRHVFTFQMIKTFSVKATLALGGGRSALSR*
Ga0066660_107152422	3300006800	Soil	MSHLHQITPNQSLELTATRRVFTFHMIKTVSVKDELALA
Ga0066660_110384882	3300006800	Soil	ELTASRRVFTFQMVKTVSIEVALALGGGSSAYSR*
Ga0073928_102165654	3300006893	Iron-Sulfur Acid Spring	PNQALERTAARRVSMFHMIKTVSVEAALAPVSGRSALSR*
Ga0075435_1000701543	3300007076	Populus Rhizosphere	MQGVYFSSAPNQALELSATRRVFTFQMIKRVSIAAELALGGGRSACSR*
Ga0066710_1002551691	3300009012	Grasslands Soil	PSRPNQTLERTATRCVFTFHMIETVLIEANLALGSGRSAPSR
Ga0066710_1022209981	3300009012	Grasslands Soil	QNDASNQALERTATRRAFTFQMTKTVSVEAKPAEGGSRSALSR
Ga0066710_1028178031	3300009012	Grasslands Soil	QNDASNQALERTATRRAFTFQMTKTVSVEAKPAEGGSRSAWSR
Ga0099829_101571691	3300009038	Vadose Zone Soil	LERTAARRVFTRQMTKTVLLEAELALGGGSSACSR*
Ga0099828_100795961	3300009089	Vadose Zone Soil	LERTATRRDVTFQMIKTDSVEAKLSDGGGRSASSR*
Ga0066709_1007942801	3300009137	Grasslands Soil	YKSPPPNQVLERTAAGRAFTFQMIKVVSIAATLALWGGRSAGFR*
Ga0066709_1020102171	3300009137	Grasslands Soil	QNDASNQALERTATRRAFTFQMTKTVSVEAKPAEGGSRSALSR*
Ga0066709_1022931981	3300009137	Grasslands Soil	ALERTATRRVFTFHTIETVSVEATSALGGARSAPSR*
Ga0066709_1025583493	3300009137	Grasslands Soil	QNDASNQALERTATRRAFTFQMTKTVSVEAKPAEGGSRSAWSR*
Ga0066709_1043898211	3300009137	Grasslands Soil	QALERTAARRAFTFQMIETLSVEAAPVVGGGRSACSR*
Ga0126373_102940993	3300010048	Tropical Forest Soil	MKPEPNRAPELTAIRRVLTFQMIKTVSIEAMLAAGSGR
Ga0134084_100413763	3300010322	Grasslands Soil	VGRRPNQTLERTATRRMFTLQMIKTVSAEAKLADGGGRSARSR*
Ga0134064_100389053	3300010325	Grasslands Soil	LPNESMISSIADRSNHSLERTAARRVFAFYMIKTISLAGTLALGGGRSAFSR*
Ga0126370_125549971	3300010358	Tropical Forest Soil	GATAARRAFLFEMIKTVSIEGTLALGGGRSACSR*
Ga0126372_108815151	3300010360	Tropical Forest Soil	STRPNQALELTATGRAFTFQRMKLLSVEAPLALDGGSLSLSR*
Ga0126381_1032065061	3300010376	Tropical Forest Soil	QTPNQALERTAVWRAFTFQMIKKVSPAATLVLGGGRSACSR*
Ga0153974_10571871	3300012180	Attine Ant Fungus Gardens	SKFMWLSKSSNQAPERTATPRVFTFQKIKTVSVEAALAFGGGRSAFSR*
Ga0153922_10522253	3300012181	Attine Ant Fungus Gardens	SNQALERTAARCAFTFPMIKTGSIGATLAPTGGRSAGSR*
Ga0137364_114207732	3300012198	Vadose Zone Soil	GRVLVTVGRRPNQTLERTATRRMFTLQMIKTVSAEAKLADGGGRSAWSR*
Ga0137383_108097182	3300012199	Vadose Zone Soil	ERTANRRAFAFQMIKTVSIEATLGVGGGRSALSR*
Ga0137382_108036761	3300012200	Vadose Zone Soil	MISSIADRSNHSLERTAARRVFAFYMIKTISLAGTLALGGGRSAFS
Ga0137363_104658503	3300012202	Vadose Zone Soil	MKDETETSNQSLERTAARRAFILQMIKTVLIQAKLAPGGGRSALSR*
Ga0137399_1000002443	3300012203	Vadose Zone Soil	MNDNGSNQALERTATRRAFTFQMIKAFSVKAALALGGGRSACSR*
Ga0137399_102279551	3300012203	Vadose Zone Soil	LELTATRRVFTRQITKTVLLEAELALGGGSSACLVR*
Ga0137377_118780741	3300012211	Vadose Zone Soil	ERTATRRMFTLQMIKTVSAEAKLADGGGRSAWSR*
Ga0137370_101281051	3300012285	Vadose Zone Soil	ALERTAAWRVFTFQMIKTVSVKAALALGGGRSACSR*
Ga0137372_102821512	3300012350	Vadose Zone Soil	ALERTAARRVFAFYMIKTISLAGTLALCGGRSAFSR*
Ga0137366_107972561	3300012354	Vadose Zone Soil	MWPNHALERTATRRVLTFHMTKTVSVGATLALGGGRSA
Ga0137360_111342111	3300012361	Vadose Zone Soil	TLERTATRRMFTFQMIKTVSAEAKFADGGGRSAWSR*
Ga0137360_116435931	3300012361	Vadose Zone Soil	QMTPPNNALERTATRRDVTFQMIKTDSVEAKLSDGGGRSASSR*
Ga0137361_110407091	3300012362	Vadose Zone Soil	DVLRPPTSNQSLERTAARRMFTFHMIKTVSVEATLALGGGRSACSR*
Ga0137373_105758652	3300012532	Vadose Zone Soil	ERTAARCAFTFQMIKTVSIEVTLALGGGRSAPSR*
Ga0137397_106595452	3300012685	Vadose Zone Soil	EPNKALERTAARRMFTFHMIKPVSVAAALGLGGGRSALSR*
Ga0137394_110545552	3300012922	Vadose Zone Soil	ALERTAARRAFTFQMIKTGLAKATLALGGGRSAFSR*
Ga0137359_100446704	3300012923	Vadose Zone Soil	MHIETLHLHLPNQPLERTAARRVFILQMINAPSVVTTLACGGGRSAWSR*
Ga0137359_115690321	3300012923	Vadose Zone Soil	TPPNNALERTATRRDVTFQMIKTDSVEAKLCDGGGRSASSR*
Ga0137404_105290351	3300012929	Vadose Zone Soil	VSIPPIASNQALERTSARCAFTFQIIKTVSLQVPLAPSGGRSA
Ga0126375_105527641	3300012948	Tropical Forest Soil	MTPNQALERTAARHVFTFQMIETVSVEAEFALGGGRSA*
Ga0164304_115382211	3300012986	Soil	ALELTATRRVFTFQMIKTISVEATLALGGGSSAYSR*
Ga0164306_108126651	3300012988	Soil	NHALERTAARRTFSFYMIKTVSALAVLAIGGGRSAWSR*
Ga0164305_118075052	3300012989	Soil	MQGVYFSSAPNQALELTATRRVFTFQMIKRVSIAAELALGGGRPACSR*
Ga0157371_105361923	3300013102	Corn Rhizosphere	MQGVYFSSAPNQALELTATRRVFTFQMIKRVSIAAE
Ga0157374_112767601	3300013296	Miscanthus Rhizosphere	EKVAETPNQALERTAARRAFVCQMIMTASVEAELAASGGRSACSR*
Ga0157372_123481571	3300013307	Corn Rhizosphere	VTRPNQALERTAARRAFTFQMIKTISLEATLAPVSGRSAWSR*
Ga0134075_100913771	3300014154	Grasslands Soil	KALEQTAARRVFTFQMIKTVSVTVDFGGDRSTLSR*
Ga0132257_1019707821	3300015373	Arabidopsis Rhizosphere	LERTATRRVFPFQMIKTISVQAAFAPGGGRSTLSR*
Ga0132255_1011811374	3300015374	Arabidopsis Rhizosphere	LERTAARGTITLQMIKTVSIEATPALGGGRSAWSR*
Ga0182035_109777401	3300016341	Soil	VMRHRRSNESLHLTAARRVFTFQMIKALSVATTLALDGGRSAT
Ga0184620_100153644	3300018051	Groundwater Sediment	NQALERTATRRTLHFLMIKTVSVAVELGDGGGRSPCFR
Ga0187766_104255011	3300018058	Tropical Peatland	QALEQTAARLALTFQMIKTVSVEATLALGDGRSACSR
Ga0184624_101565383	3300018073	Groundwater Sediment	SNQALELTAARCAFTFQMIKTVSVEATLGPGGDSSACSR
Ga0184624_105248542	3300018073	Groundwater Sediment	MFRSPPPNQALERTAARRVFTFEMIKTVSVEAKLA
Ga0066667_106157463	3300018433	Grasslands Soil	MQPRERRNQALERIAAVRVFTFQMANTVSLETERALGGGRS
Ga0066662_120014432	3300018468	Grasslands Soil	QALERTAARRAFTFLLIKTVSPEAELALSGGRSACSR
Ga0066669_100542172	3300018482	Grasslands Soil	MISSIADRSNHALERTAARRVFAFYMIKTISLAGTLALGGGRSAFSR
Ga0066669_113287462	3300018482	Grasslands Soil	PNQTLERTVTRRMFTFQMIKTVSAQAKLADGGGRSSFSR
Ga0193723_10135791	3300019879	Soil	MQGVYFSSAPNQALELTATRRVFTFQMIKRVSIAAELALGGGRSACSR
Ga0193729_10000384	3300019887	Soil	MRPNHVLERTAARRVFTFQMIKTVSVEATLAFGGGRSAFSR
Ga0193751_10101291	3300019888	Soil	LHDESPNQTLERTAARRAFTFKMIETVSVEATLGFGSGRSALSR
Ga0193735_10234882	3300020006	Soil	MNLMPPNHALQRTATRRVFTFPMIKTVSVAASLVLGGGR
Ga0193735_11675221	3300020006	Soil	MRPNQALELTATPRAFTFQMIKTVSVEATLAPGGDS
Ga0210384_1000475413	3300021432	Soil	MRSNHALQRTATRRVFTFRMIKTVLLDAVLGLGDGR
Ga0207684_101820621	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LRSNQALERTATRRTFTFQMTKTVSVEGEFAPGVGRSALSR
Ga0207693_112355251	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALERTATRRAFMFHLIKTVSVAAMLALGGGRSPYSR
Ga0207664_108504231	3300025929	Agricultural Soil	LEPTAARCAFTFQMIKTVSLEATLALGGGRSAFSR
Ga0207658_117975041	3300025986	Switchgrass Rhizosphere	MIATSASNQALERTAARRAFTFQMIKTVSVEAESAVSGGRSAWCR
Ga0209057_10822202	3300026342	Soil	MISSIADRSNHSLERTAARRVFAFYMIKTISLAGTLALGGGRSAFSR
Ga0257161_11356961	3300026508	Soil	RPNQALERTAARRVFTFQMIKTVSVEAELALGGGRSALSR
Ga0209059_10267693	3300026527	Soil	MTPNQALERTAARRTFTFQMTKTISVEATLALGGGGSAYSR
Ga0209805_10162401	3300026542	Soil	NQALELTATRRVFTFQMIKTVSVEAALGLGGGSSAYSR
Ga0209474_101512432	3300026550	Soil	MTPNQALERTAARRTFTFQMTKTVSVEATLALGGGGSAYSR
Ga0209328_101748071	3300027727	Forest Soil	VSGTTNNSSNQALDRTAARRVFTFQMIKTVSVEAACALGGGRS
Ga0209283_109146151	3300027875	Vadose Zone Soil	LERTATRRDVTFQMIKTDSVEAKLSDGGGRSASSR
Ga0209526_100036315	3300028047	Forest Soil	MILPPNQALERTAARRVFTFQMIKTVPVETALALGGGRSAPSR
Ga0137415_111868961	3300028536	Vadose Zone Soil	QALERTATRRVFTLQMIKTVSVKAALALGGGSSACSR
Ga0137415_113665172	3300028536	Vadose Zone Soil	MATNTPNQSLELTATRCVFTFQMIKTVSVKATLAAGGGS
Ga0307311_101639491	3300028716	Soil	MGPNQALELTATPRAFTFQMIKTVSVEATLAPGGGS
Ga0307282_105440912	3300028784	Soil	MAASHLNATPNQALERTATRRAFTFQMIKTVSVAATLALGDGRSA
Ga0170824_1125142602	3300031231	Forest Soil	MTPDKALERTAARGTLALPMIKAVSAQTTLALGGGRSAFSR
Ga0310813_102511652	3300031716	Soil	LERTAARRTFTFQMIKRFPIEAEHVVGGGRSAFSR
Ga0307477_100190416	3300031753	Hardwood Forest Soil	MNDNGSNQALERIATRRAFTFQMIKKSSVKAALALGGRRSVLSR
Ga0307473_106726622	3300031820	Hardwood Forest Soil	GPNQALELTAARRMFTFQMIKTVSPKATLALGGGRSAWSR
Ga0307478_112010012	3300031823	Hardwood Forest Soil	MNDNGSNQALERIVTRRAFTFQMIKKSSVKAALALGGRRSVLSR
Ga0306921_101453085	3300031912	Soil	MIDELRENRPNQSLERTAAAGVCSHFQMIKTVSVEATLALAGGRSA
Ga0307479_100697893	3300031962	Hardwood Forest Soil	MAPNQSLERTATRDVFTLQMIKTVSVEATLALGGSSSALSR
Ga0307471_1015755761	3300032180	Hardwood Forest Soil	MNCFPKRPNQALELTATRCVFTFQMIETVSIEATVALG
Ga0310810_108854892	3300033412	Soil	MIRDVPNQSSFLTAARRAFAFQMIKTVLVAATLALGDGRSAWSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F044102

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences