NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F043844

Metagenome / Metatranscriptome Family F043844

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F043844
Family Type Metagenome / Metatranscriptome
Number of Sequences 155
Average Sequence Length 43 residues
Representative Sequence MTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRF
Number of Associated Samples 127
Number of Associated Scaffolds 155

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.19 %
% of genes near scaffold ends (potentially truncated) 24.52 %
% of genes from short scaffolds (< 2000 bps) 82.58 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.419 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.484 % of family members)
Environment Ontology (ENVO) Unclassified
(28.387 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(22.581 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.
1A5_c1_01702310
2JGI11643J11755_112590011
3AF_2010_repII_A001DRAFT_101048222
4JGI1027J12803_1072102322
5C687J26616_100888091
6C687J26623_100070783
7JGIcombinedJ26739_1014491502
8Ga0055437_100190753
9Ga0055437_100390033
10Ga0055437_101576071
11Ga0055436_100640013
12Ga0055433_100652551
13Ga0066395_100010675
14Ga0066395_100868073
15Ga0066674_101164311
16Ga0066685_102222553
17Ga0066388_1008925421
18Ga0070689_1001228261
19Ga0070713_1003178613
20Ga0070708_1001315322
21Ga0070706_1007700012
22Ga0070707_1020393681
23Ga0070697_1013589501
24Ga0070696_1011136711
25Ga0074479_103011973
26Ga0074479_111456191
27Ga0074472_105473824
28Ga0066651_105099632
29Ga0066652_1011845091
30Ga0066665_109124892
31Ga0075425_1000105004
32Ga0099791_106269102
33Ga0099829_100719432
34Ga0099829_101455843
35Ga0099828_105462782
36Ga0099828_106395651
37Ga0099827_118899072
38Ga0066709_1005583652
39Ga0105164_106481462
40Ga0126384_101190973
41Ga0126384_101213891
42Ga0126382_100027683
43Ga0126382_100702462
44Ga0134084_102938901
45Ga0126370_102258701
46Ga0126370_117725781
47Ga0126376_122245801
48Ga0126376_129758441
49Ga0136847_109118703
50Ga0136847_119527882
51Ga0136847_121026971
52Ga0126383_105496721
53Ga0137391_104660213
54Ga0137446_10619231
55Ga0137445_11360952
56Ga0137389_102354082
57Ga0137388_106650232
58Ga0137365_102945662
59Ga0137374_1000377115
60Ga0137380_106459582
61Ga0137381_102691563
62Ga0137379_101828771
63Ga0137379_102379781
64Ga0137339_10370171
65Ga0137397_100392473
66Ga0137394_113203341
67Ga0137419_115117351
68Ga0137416_102476592
69Ga0153915_103293334
70Ga0153915_128849762
71Ga0137410_108361012
72Ga0137410_108818862
73Ga0126375_111811421
74Ga0153916_100329904
75Ga0075353_11131252
76Ga0180066_10981282
77Ga0180074_10339921
78Ga0180094_10074562
79Ga0180069_10111693
80Ga0180104_10145123
81Ga0180089_10841341
82Ga0180073_10283673
83Ga0137403_103794422
84Ga0184638_12175952
85Ga0184615_100540053
86Ga0184615_102348862
87Ga0184615_105501241
88Ga0184615_105515071
89Ga0184619_100436312
90Ga0184637_105435712
91Ga0184633_102080452
92Ga0184612_101177741
93Ga0184627_106430492
94Ga0184629_104429361
95Ga0184629_105084962
96Ga0066669_121903111
97Ga0184648_10445992
98Ga0180109_12440761
99Ga0206224_10053991
100Ga0206227_10251912
101Ga0210377_101111782
102Ga0210377_104843921
103Ga0210377_106838232
104Ga0210324_13261721
105Ga0213917_10125763
106Ga0126371_103569273
107Ga0126371_116250011
108Ga0126371_128180492
109Ga0209001_10029314
110Ga0209343_102152432
111Ga0209751_105954813
112Ga0210132_10290232
113Ga0210131_10395441
114Ga0210108_10013912
115Ga0210073_10763691
116Ga0210138_10023534
117Ga0207685_106920112
118Ga0207646_113763951
119Ga0207686_100452642
120Ga0257170_10386091
121Ga0209117_10519892
122Ga0209466_10036504
123Ga0208991_11745792
124Ga0209180_105981861
125Ga0137415_100524883
126Ga0307504_100088371
127Ga0170820_118165852
128Ga0318516_103203311
129Ga0307469_113142882
130Ga0307469_114221251
131Ga0318494_102817411
132Ga0307473_106678612
133Ga0315290_100188216
134Ga0315290_100747712
135Ga0326597_1000184518
136Ga0326597_103869642
137Ga0326597_105596841
138Ga0326597_109854082
139Ga0315278_102675933
140Ga0315292_112259982
141Ga0315281_100466373
142Ga0315283_120200481
143Ga0315276_110950972
144Ga0307471_1042679891
145Ga0315271_117604481
146Ga0315287_113428381
147Ga0335070_105397603
148Ga0334722_110083981
149Ga0214472_102461112
150Ga0214471_103214323
151Ga0364928_0108447_71_187
152Ga0364930_0247342_2_109
153Ga0326723_0041383_1035_1151
154Ga0364942_0095324_772_888
155Ga0364932_0350183_7_123
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 52.05%    β-sheet: 0.00%    Coil/Unstructured: 47.95%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045MTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRFExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreSignal PeptideTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
77.4%22.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Sediment
Freshwater Sediment
Freshwater Wetlands
Wastewater
Groundwater
Freshwater
Estuarine
Natural And Restored Wetlands
Soil
Sediment (Intertidal)
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Soil
Soil
Grasslands Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Soil
Natural And Restored Wetlands
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Soil
Deep Subsurface Sediment
Peat Soil
Sediment
Populus Rhizosphere
Miscanthus Rhizosphere
3.2%6.5%6.5%6.5%7.7%3.2%15.5%8.4%4.5%5.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A5_c1_017023102124908044SoilMRQEFWMVVGTLVVPFFWILPLSRAAYARVYSRRDRRF
JGI11643J11755_1125900113300000787SoilMTRPPLYMRQEFWMVMGTLFIPFFWILPLSRAAYARVSVR
AF_2010_repII_A001DRAFT_1010482223300000793Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARAAIRR
JGI1027J12803_10721023223300000955SoilMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARIN
C687J26616_1008880913300002120SoilMTRAPWYMRQEFWMLVGTLVVPFFWILPLSRAAYARVSVRRDRRF*
C687J26623_1000707833300002122SoilMTRAPWYMRQEFWMLVGTLVVPFFWILPLSRAAYARVSLRRDRRF*
JGIcombinedJ26739_10144915023300002245Forest SoilMTRAPWYMRLEFWIVMATLFVPFFWILPLSRAAYARVS
Ga0055437_1001907533300004009Natural And Restored WetlandsMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSLLRDRRF*
Ga0055437_1003900333300004009Natural And Restored WetlandsMTRAPWYLRQEFWMVVATLVVPFFWILPLSRAAYAWVSVLRDRHF*
Ga0055437_1015760713300004009Natural And Restored WetlandsMTRAPWYMRQEFWIVLATLIVPFFWILPLSRAAYARVSVRRERRF*
Ga0055436_1006400133300004024Natural And Restored WetlandsMTRAPWYLRQDFWMLVGTLVVPFFWILPLSRAALARVNSRRGRSF*
Ga0055433_1006525513300004025Natural And Restored WetlandsMTRAPWYMRQEFWIVLATLIVPFFWILPLSRAAYARVSIRRERRF*
Ga0066395_1000106753300004633Tropical Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARAAIRRERRF*
Ga0066395_1008680733300004633Tropical Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARVAIRRERRF*
Ga0066674_1011643113300005166SoilMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVYVHRERRF*
Ga0066685_1022225533300005180SoilMTRAPWYMRQEFWMVVGTLVVPFFWSLPLSRAAYARVYVHRERRF*
Ga0066388_10089254213300005332Tropical Forest SoilMTRAPWYAKPEFWILMGTLFVPFFWILPLSRAAYARVAVRRERRF*
Ga0070689_10012282613300005340Switchgrass RhizosphereMTRPPLYMRQEFWMVIGTLFIPFFWILPLSRAAYARVSVRRERRF*
Ga0070713_10031786133300005436Corn, Switchgrass And Miscanthus RhizosphereMTRPPLYMRQEFWMVMGTLFIPFFWILPLSRAAYARVSVRRERRF*
Ga0070708_10013153223300005445Corn, Switchgrass And Miscanthus RhizosphereMTRAPWYLRQEFWMVVATLVVPFFWILPLSRAAYARVSARRERRF*
Ga0070706_10077000123300005467Corn, Switchgrass And Miscanthus RhizosphereMTRAPWYLRQEFWMVVATLVVPFFWILPLSRAAYAYARVSARRERRF*
Ga0070707_10203936813300005468Corn, Switchgrass And Miscanthus RhizosphereMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVNVRRDRRF*
Ga0070697_10135895013300005536Corn, Switchgrass And Miscanthus RhizosphereMERAAWYMRPEFWMMVGTLVVPFFWILPLSRAAYARVYVRRERRF*
Ga0070696_10111367113300005546Corn, Switchgrass And Miscanthus RhizosphereMTRPPLYMRQEFWMVIGTLFIPFFWILPLSRAAYARVSVRRER
Ga0074479_1030119733300005829Sediment (Intertidal)MRQEFWMVMGTLFVPFFWILPLGRAAYARASVRRERRRF*
Ga0074479_1114561913300005829Sediment (Intertidal)MTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVCLRRGRHF*
Ga0074472_1054738243300005833Sediment (Intertidal)MRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARA
Ga0066651_1050996323300006031SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRF*
Ga0066652_10118450913300006046SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVYVHRERRF*
Ga0066665_1091248923300006796SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYA
Ga0075425_10001050043300006854Populus RhizosphereMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARVAIRRDRRF*
Ga0099791_1062691023300007255Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSVHRERRF*
Ga0099829_1007194323300009038Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSVPRERRF*
Ga0099829_1014558433300009038Vadose Zone SoilMRQEFWMVVGTLVVPFFWILPLSRAAYSRVSVRRGRRF*
Ga0099828_1054627823300009089Vadose Zone SoilMTQAPWYLRQEFWIVVPTLVVPFFWILPLSRAAYARVYSRRGRRF*
Ga0099828_1063956513300009089Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFLWILPLSRAAYARVSVRRERRF*
Ga0099827_1188990723300009090Vadose Zone SoilEFWMVVGTLVVPFFWLLPLSRAAYARVNVRRDRRF*
Ga0066709_10055836523300009137Grasslands SoilMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRF*
Ga0105164_1064814623300009777WastewaterMTRAPWYLRQEFWMLVGTLVVPFFWILPLSRAAYARVNSRRGRRF*
Ga0126384_1011909733300010046Tropical Forest SoilMERAAWYMRPEFWMVVGTLVVPFFWLLPLSRAAYARVTVRRDRRF*
Ga0126384_1012138913300010046Tropical Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYGRVAIRRERRF*
Ga0126382_1000276833300010047Tropical Forest SoilMTRASWYARPEFWILMGTLFVPFFWILPLSRAAYARVAIRRERRF*
Ga0126382_1007024623300010047Tropical Forest SoilMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVSVRRDRRF*
Ga0134084_1029389013300010322Grasslands SoilMRQEFWMVVGTLVVPFFWILPLSRAAYARVYVHRERRF*
Ga0126370_1022587013300010358Tropical Forest SoilATQARRSWMERAAWYMRPEFWMVVGTLVVPFFWLLPLSRAAYARVTVRRDRRF*
Ga0126370_1177257813300010358Tropical Forest SoilMTRAPWYAKPEFWILMGTLFVPFFWILPLSRAAYARVAIRRERRF*
Ga0126376_1222458013300010359Tropical Forest SoilTRRSGMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARVAIRRERRF*
Ga0126376_1297584413300010359Tropical Forest SoilWYARPEFWILMGTLFVPFFWILPLSRAAYARVAIRRERRF*
Ga0136847_1091187033300010391Freshwater SedimentMRQEFWMVVAMLVVPFFWILPLSRAAYVRVNSRWGRPF*
Ga0136847_1195278823300010391Freshwater SedimentMRQEFWMVVGTLVVPFFWILPLSRAAYARVNSRRDRGF*
Ga0136847_1210269713300010391Freshwater SedimentMVRARWYLRQEFWMLMGTLFVPFFWILPLGRAAYARVSVRRDRRF*
Ga0126383_1054967213300010398Tropical Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYAR
Ga0137391_1046602133300011270Vadose Zone SoilMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVNVRRDHRF*
Ga0137446_106192313300011419SoilPTTARRRRMTPAPWYMSQEFWMVVGTLVVPFFWILPLSRAAYARVYLRRGRRF*
Ga0137445_113609523300012035SoilQEFWIVVGTLVVPFFWILPLSRAAYARAYSGRDRRF*
Ga0137389_1023540823300012096Vadose Zone SoilMVRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRF*
Ga0137388_1066502323300012189Vadose Zone SoilMVRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSVPRERRF*
Ga0137365_1029456623300012201Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYAYARVSARRERRF*
Ga0137374_10003771153300012204Vadose Zone SoilMTRPPWYLRQEFWIVVGTLVVPFFWILPLSRAAYARVSVRRERRF*
Ga0137380_1064595823300012206Vadose Zone SoilMRQEFWMVLGTLFIPFFWILPLSRAAYARVSIRRERRF*
Ga0137381_1026915633300012207Vadose Zone SoilMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVNLRRDRRF*
Ga0137379_1018287713300012209Vadose Zone SoilRPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVNLRRDRRS*
Ga0137379_1023797813300012209Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRLAYARVSVHRERRF*
Ga0137339_103701713300012673SoilMRHEFWMVLATLVVPFFWILPLSRAAYARVSLRRDSRF*
Ga0137397_1003924733300012685Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRVAYARVSVRRERRF*
Ga0137394_1132033413300012922Vadose Zone SoilMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRLAYARVSVRRERRF*
Ga0137419_1151173513300012925Vadose Zone SoilMTRAPWYMRLEFWMVMATLFVPFFWILPLSRAAYARVSVRRERRF*
Ga0137416_1024765923300012927Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRLAYARVSVRRERRF*
Ga0153915_1032933343300012931Freshwater WetlandsMRRAPWYLRQEFWMLVGTLVVPFFWILPLSRAAFARVSLRRDRRF*
Ga0153915_1288497623300012931Freshwater WetlandsMTRAPWYLRQEFWMLVRTLVVPFFWILPLSRAAYARVNSRRDRRF*
Ga0137410_1083610123300012944Vadose Zone SoilWYMRQEFWMVVGTLVVPFFWILPLSRLAYARVSVRRERRF*
Ga0137410_1088188623300012944Vadose Zone SoilMRLEFWMVMATLFVPFFWILPLSRAAYARVSVRRERRF*
Ga0126375_1118114213300012948Tropical Forest SoilMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVS
Ga0153916_1003299043300012964Freshwater WetlandsMTRAPWYRRQEFWMLVGTLVVPFFWILPLSRAAYARVSLRRDRRF*
Ga0075353_111312523300014321Natural And Restored WetlandsMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAVYARVSLRRD*
Ga0180066_109812823300014873SoilMRQEFWMLVGTLVVPFFWILPLSRAAYARVNSRRDRRF*
Ga0180074_103399213300014877SoilMTRAPWYLRQEFWMLVATLVVPFFWILPLSRAAYARISLRRNRHF*
Ga0180094_100745623300014881SoilMRQEFWMVVGTLVVPFFWILPLSRAAYARVNSRRGRRI*
Ga0180069_101116933300014882SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAVYARVYLRRGRRF*
Ga0180104_101451233300014884SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVNSRRGRRI*
Ga0180089_108413413300015254SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAVYARVYLRRGRRF
Ga0180073_102836733300015256SoilMRQEFWIVVGTLVVPFFWILPLSRAAYARVYSRRDRRF*
Ga0137403_1037944223300015264Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVYVRRERRF*
Ga0184638_121759523300018052Groundwater SedimentMERAAWYMRPEFWMMVGTLVVPFFWILPLSRAAYARVYVRRERRF
Ga0184615_1005400533300018059Groundwater SedimentMTRAPWYMRQEFWIVVGTLVVPFFWILPLSRAAYARVNSRRDRRF
Ga0184615_1023488623300018059Groundwater SedimentMTRAPWYLRQEFWMLVGTLVVPFFWILPLSRAAYARVSLRRARRF
Ga0184615_1055012413300018059Groundwater SedimentMTRAPWYLRQEFWMLVGTLVVPFFWILPLSRAAYARVSARRDRRF
Ga0184615_1055150713300018059Groundwater SedimentMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVNSR
Ga0184619_1004363123300018061Groundwater SedimentMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRLAYARVSVRRERRF
Ga0184637_1054357123300018063Groundwater SedimentMVRAPWYLRQEFWMLMGTLFVPFFWILPLGRAAYARASVRRDRRF
Ga0184633_1020804523300018077Groundwater SedimentMVRAPWYLRQEFWMLMGTLFVPFFWILPLGRAAYARLSVRRDRRS
Ga0184612_1011777413300018078Groundwater SedimentMTRAPWYMRQEFWMVVGTLMVPFFWIVPLSRAAYARVNSRRDRRF
Ga0184627_1064304923300018079Groundwater SedimentMTRAPWYMRQEFWMVAGTLVVPFFWILPLSRAAYARVNLRR
Ga0184629_1044293613300018084Groundwater SedimentMRQEFWMVVGTLVVPFFWILPLSRAAYARVSSRRGRRF
Ga0184629_1050849623300018084Groundwater SedimentMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVYLRRGRRF
Ga0066669_1219031113300018482Grasslands SoilMRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRF
Ga0184648_104459923300019249Groundwater SedimentYLRQEFWMVVGTLVVPFFWLLPLGRAAYARVYLRRGRRF
Ga0180109_124407613300020067Groundwater SedimentQSMTRVPWYMRQEFWILMGTLFVPFFWILPLSRAAYARVTVRRERRF
Ga0206224_100539913300021051Deep Subsurface SedimentMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVYLRRGRRF
Ga0206227_102519123300021063Deep Subsurface SedimentMTRAPWYIRQEFWMVVGTLVVPFFWILPLSRAAYARVSLRRDRRF
Ga0210377_1011117823300021090Groundwater SedimentMRQEFWIVVGTLVVPFFWILPLSRAAYARVNSRRDRRF
Ga0210377_1048439213300021090Groundwater SedimentMTRAPWYLRQEFWMLVGTLVVPFFWILPLSRAAYARVSLRRDRRF
Ga0210377_1068382323300021090Groundwater SedimentTTTTARRRRMTRAPWYLRQEFWMLVGTLVVPFFWILPLSRAAYARVSARRDRRF
Ga0210324_132617213300021333EstuarineMTRAPWYMRQEFWMVMGTLFVPFFWILPLGRAAYARASVRRERRR
Ga0213917_101257633300021437FreshwaterMTRTPWYLRQEFWIVVGTLVLPFFWILPLSRAAYARVGLRRDRRF
Ga0126371_1035692733300021560Tropical Forest SoilMTRAPWYAKPEFWILMGTLFVPFFWILPLSRAAYARVAVRRERRF
Ga0126371_1162500113300021560Tropical Forest SoilMTRAPWYARREFWILMGTLFLPFFWILPLSRAAYARAAIRRERRF
Ga0126371_1281804923300021560Tropical Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARVAIRRERRF
Ga0209001_100293143300025002SoilMTRAPWYMRQEFWMLVGTLVVPFFWILPLSRAAYARVSVRRDRRF
Ga0209343_1021524323300025311GroundwaterMTRAPWYMRQEFWMLVGTLVVPFFWILPLSRAAYARVSLRRDSRF
Ga0209751_1059548133300025327SoilQEFWMLVGTLVVPFFWILPLSRAAYARVSVRRDRRF
Ga0210132_102902323300025538Natural And Restored WetlandsMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSLLRDRRF
Ga0210131_103954413300025551Natural And Restored WetlandsMTRAPWYMRQEFWIVLATLIVPFFWILPLSRAAYA
Ga0210108_100139123300025560Natural And Restored WetlandsMTRAPWYMRQEFWIVLATLIVPFFWILPLSRAAYARVSIRRERRF
Ga0210073_107636913300025569Natural And Restored WetlandsMTRAPWYMRQEFWIVLATLIVPFFWILPLSRAAYARVSIR
Ga0210138_100235343300025580Natural And Restored WetlandsMTRAPWYMRQEFWIVLATLIVPFFWILPLSRAAYARVSVRRERRF
Ga0207685_1069201123300025905Corn, Switchgrass And Miscanthus RhizosphereMTRAPWYLRQEFWMVVATLVVPFFWILPLSRAAYARVSVRRERRF
Ga0207646_1137639513300025922Corn, Switchgrass And Miscanthus RhizosphereMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVNVRRDRRF
Ga0207686_1004526423300025934Miscanthus RhizosphereMTRPPLYMRQEFWMVIGTLFIPFFWILPLSRAAYARVSVRRERRF
Ga0257170_103860913300026351SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRERRF
Ga0209117_105198923300027645Forest SoilMTRAPWYMRQEFWIVVGTLVVPFFWILPLSRAAYARVYSGRDRRS
Ga0209466_100365043300027646Tropical Forest SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARAAIRRERRF
Ga0208991_117457923300027681Forest SoilMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYARVYVHRERRF
Ga0209180_1059818613300027846Vadose Zone SoilMTRAPWYMRQEFWMVVGTLVVPFFWILPLSRAAYSRVSVRRGRRF
Ga0137415_1005248833300028536Vadose Zone SoilMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRLAYARVSVRRERRF
Ga0307504_1000883713300028792SoilMTRAPWYLRQEFWIVVATLVVPFFWILPLSRAAYARVSVRRERRF
Ga0170820_1181658523300031446Forest SoilLPLYMRQEFWMVMGTLFIPFFWILPLSRAAYARVSVRRERRF
Ga0318516_1032033113300031543SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYA
Ga0307469_1131428823300031720Hardwood Forest SoilMERPAWYMKPEFWMMVGTLVVPFFWILPISRAAYARVYVRRERRF
Ga0307469_1142212513300031720Hardwood Forest SoilMERPAWYMKPEFWMVVGTLVVPFFWLLPLSRAAYARVNLRRDRRF
Ga0318494_1028174113300031751SoilMTRAPWYARPEFWILMGTLFVPFFWILPLSRAAYARAAI
Ga0307473_1066786123300031820Hardwood Forest SoilMTRAPWYMRQEFWMVVGTLVVPFFWLLPLSRAAYARVNSRRDRRF
Ga0315290_1001882163300031834SedimentMTRAPWYMRQEFWVVMGTLFVPFFWILPLGRAAYARVSVRRGRRF
Ga0315290_1007477123300031834SedimentMTRAPWYMRKEFWMVVATLVVPFFWMLPLSRAAYARVYLRRGRRF
Ga0326597_10001845183300031965SoilMTRTPWYLRQEFWLLVGTLVVPFFWILPVSRAAYARVSVRRDRRF
Ga0326597_1038696423300031965SoilMTRAPWYLRQEFWMLVVALVVPFFWILPLSRAAYARVSLRRDRRF
Ga0326597_1055968413300031965SoilRRMTRPPWYLRQEFWMLVGTLVVPFFWILPLSRAAYARVSVRQDPRF
Ga0326597_1098540823300031965SoilMTRAPWYLRLEFWMLVATLVVPFFWILPLSRAAYARISLRRNRRF
Ga0315278_1026759333300031997SedimentMTQAPWYMRQEVWMVVATLVVPFFWMLPLGRAAYARVNLRRGRRF
Ga0315292_1122599823300032143SedimentMRQEFWVVMGTLFVPFFWILPLGRAAYARVSVRRGRRF
Ga0315281_1004663733300032163SedimentMTQAPWYLRQDFWMLIGTIVVPFFWVLPLSRAVYARVSLRQDRRF
Ga0315283_1202004813300032164SedimentVRRRRMTRAPWYMRKEFWMVVATLVVPFFWMLPLSRAAYARVYLRRGRRF
Ga0315276_1109509723300032177SedimentRQEVWMVVATLVVPFFWMLPLGRAAYARVNLRRGRRF
Ga0307471_10426798913300032180Hardwood Forest SoilMTRAPWYMRQEFWMVVGTLVVPFFWLLPLSRAAYARVNSRRN
Ga0315271_1176044813300032256SedimentMTRAPWYLRQEFWMVVGTLVVPFFWILPLSRAAYARVYLRRGR
Ga0315287_1134283813300032397SedimentTTTTVRRRRMTQAPWYMRQEVWMVVATLVVPFFWMLPLGRAAYARVNLRRGRRF
Ga0335070_1053976033300032829SoilMTRDPWYLRPDFWMLIGTLVVPFFWLVPLSRAAYARVTVRRNCRF
Ga0334722_1100839813300033233SedimentMTRAPWYLRQEFWMVVGTLVVPFFWVLPLSRAAYACVYQRRGRRF
Ga0214472_1024611123300033407SoilMTRVPWYMRQEFWMLVGTLVVPFFWILPLSRAAYARVSVRRDRRF
Ga0214471_1032143233300033417SoilMTRAPWYMRQEFWMLVGTLVVPFFWILPLSRAAYARVSVRRDRCF
Ga0364928_0108447_71_1873300033813SedimentMRQEFWMVVGTLVVPFFWILPLSRAAYARVNSRRGRPF
Ga0364930_0247342_2_1093300033814SedimentEFWIVVGTLVVPFFWILPLSRAAYARVNLRRGRRF
Ga0326723_0041383_1035_11513300034090Peat SoilMRQEFWIVLATLIVPFFWILPLSRAAYARVSVRRERRF
Ga0364942_0095324_772_8883300034165SedimentMRQEFWIVVGTLVVPFFWILPLSRAAYARVNLRRGRRF
Ga0364932_0350183_7_1233300034177SedimentMRQEFWMVVGTLVVPFFWILPLSRAAYARVSVRRDRRF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.