Metagenome / Metatranscriptome Family F042232

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042232
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	65 residues
Representative Sequence	FEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK
Number of Associated Samples	138
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.63 %
% of genes near scaffold ends (potentially truncated)	91.77 %
% of genes from short scaffolds (< 2000 bps)	87.34 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.772 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (13.291 % of family members)
Environment Ontology (ENVO)	Unclassified (41.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.937 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 35.56% Coil/Unstructured: 64.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04366	Ysc84	20.89
PF07366	SnoaL	5.70
PF02885	Glycos_trans_3N	2.53
PF00210	Ferritin	2.53
PF01968	Hydantoinase_A	2.53
PF05378	Hydant_A_N	1.90
PF00990	GGDEF	1.90
PF00158	Sigma54_activat	1.27
PF09994	DUF2235	1.27
PF02915	Rubrerythrin	1.27
PF02567	PhzC-PhzF	1.27
PF04402	SIMPL	0.63
PF08352	oligo_HPY	0.63
PF13380	CoA_binding_2	0.63
PF13463	HTH_27	0.63
PF12645	HTH_16	0.63
PF01337	Barstar	0.63
PF13398	Peptidase_M50B	0.63
PF12706	Lactamase_B_2	0.63
PF08668	HDOD	0.63
PF00970	FAD_binding_6	0.63
PF01042	Ribonuc_L-PSP	0.63
PF13519	VWA_2	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	20.89
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	3.80
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	1.27
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.63
COG2732	Barstar, RNAse (barnase) inhibitor	Transcription [K]	0.63
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.63
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.63
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.77 %
Unclassified	root	N/A	8.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.77 %
Unclassified	root	N/A	8.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.77 %
Unclassified	root	N/A	8.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.24 %
Unclassified	root	N/A	8.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.42 %
Unclassified	root	N/A	8.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.43 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.42 %
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.42 %
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.16 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.90 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.27 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.90 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.90 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10049875	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300001546\|JGI12659J15293_10006460	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300002245\|JGIcombinedJ26739_100202687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1875	Open in IMG/M
3300004080\|Ga0062385_10937456	Not Available	577	Open in IMG/M
3300004091\|Ga0062387_101455865	Not Available	547	Open in IMG/M
3300004092\|Ga0062389_103396154	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300004972\|Ga0072325_1248391	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005327\|Ga0070658_10814445	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005343\|Ga0070687_101336890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005437\|Ga0070710_10897917	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005468\|Ga0070707_100214079	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300005471\|Ga0070698_100681259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	970	Open in IMG/M
3300005561\|Ga0066699_11216634	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005591\|Ga0070761_10703706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	633	Open in IMG/M
3300005875\|Ga0075293_1020193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	838	Open in IMG/M
3300005938\|Ga0066795_10143595	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006050\|Ga0075028_100763637	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300006052\|Ga0075029_100017758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3959	Open in IMG/M
3300006059\|Ga0075017_100213438	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300006102\|Ga0075015_100798964	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006162\|Ga0075030_100319002	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300006162\|Ga0075030_100483877	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300006162\|Ga0075030_100689042	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006797\|Ga0066659_10516175	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300009038\|Ga0099829_10688364	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300009088\|Ga0099830_11762979	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300009521\|Ga0116222_1522342	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009522\|Ga0116218_1004351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6940	Open in IMG/M
3300009522\|Ga0116218_1136526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300009524\|Ga0116225_1104634	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300009524\|Ga0116225_1304322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	712	Open in IMG/M
3300009616\|Ga0116111_1012295	All Organisms → cellular organisms → Bacteria	3393	Open in IMG/M
3300009623\|Ga0116133_1102617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300009634\|Ga0116124_1138746	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300009639\|Ga0116122_1196148	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009641\|Ga0116120_1171737	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300009643\|Ga0116110_1093021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300009643\|Ga0116110_1166216	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009643\|Ga0116110_1182090	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009683\|Ga0116224_10076878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1625	Open in IMG/M
3300009700\|Ga0116217_10261296	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300009759\|Ga0116101_1180973	Not Available	530	Open in IMG/M
3300009764\|Ga0116134_1049046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1619	Open in IMG/M
3300009824\|Ga0116219_10116313	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300009839\|Ga0116223_10245307	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300010366\|Ga0126379_11811957	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	714	Open in IMG/M
3300010379\|Ga0136449_102930915	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300011120\|Ga0150983_15122176	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300012202\|Ga0137363_10790998	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012202\|Ga0137363_10838527	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300012205\|Ga0137362_10400660	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300012209\|Ga0137379_10890031	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300012362\|Ga0137361_10875027	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012469\|Ga0150984_123369029	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300012582\|Ga0137358_10795163	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300012683\|Ga0137398_10262031	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300012918\|Ga0137396_10757341	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300012925\|Ga0137419_11495200	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012986\|Ga0164304_11090810	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300013503\|Ga0120127_10151566	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300014155\|Ga0181524_10331794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	683	Open in IMG/M
3300014155\|Ga0181524_10388580	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300014162\|Ga0181538_10016289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5382	Open in IMG/M
3300014498\|Ga0182019_10022085	All Organisms → cellular organisms → Bacteria	3490	Open in IMG/M
3300014501\|Ga0182024_11115878	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300014502\|Ga0182021_11749991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300014638\|Ga0181536_10232230	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300014654\|Ga0181525_10203838	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300015241\|Ga0137418_10736475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300015242\|Ga0137412_10630030	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300016702\|Ga0181511_1015651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300017941\|Ga0187850_10282774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	739	Open in IMG/M
3300017946\|Ga0187879_10599518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	612	Open in IMG/M
3300017946\|Ga0187879_10731206	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300017955\|Ga0187817_10231978	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300017996\|Ga0187891_1179776	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300017998\|Ga0187870_1158106	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300018006\|Ga0187804_10099957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1191	Open in IMG/M
3300018009\|Ga0187884_10121281	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300018019\|Ga0187874_10277674	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300018019\|Ga0187874_10328565	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018020\|Ga0187861_10237716	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300018038\|Ga0187855_10946083	Not Available	502	Open in IMG/M
3300018042\|Ga0187871_10159930	Not Available	1270	Open in IMG/M
3300018047\|Ga0187859_10529350	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018085\|Ga0187772_10673123	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300018086\|Ga0187769_10615316	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300018482\|Ga0066669_12392693	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300019082\|Ga0187852_1414158	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300019275\|Ga0187798_1214414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	568	Open in IMG/M
3300019278\|Ga0187800_1544395	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300019278\|Ga0187800_1607062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	995	Open in IMG/M
3300019284\|Ga0187797_1509765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	500	Open in IMG/M
3300021168\|Ga0210406_11203592	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300021402\|Ga0210385_11412596	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300021405\|Ga0210387_11083930	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021420\|Ga0210394_10486374	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300021433\|Ga0210391_10028133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4518	Open in IMG/M
3300021475\|Ga0210392_10115806	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300021559\|Ga0210409_10333594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1364	Open in IMG/M
3300022533\|Ga0242662_10255166	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300025442\|Ga0208034_1018433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1985	Open in IMG/M
3300025480\|Ga0208688_1002446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6946	Open in IMG/M
3300025496\|Ga0208191_1018896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1703	Open in IMG/M
3300025496\|Ga0208191_1050334	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025498\|Ga0208819_1088775	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300025500\|Ga0208686_1013366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2241	Open in IMG/M
3300025507\|Ga0208188_1093310	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300025909\|Ga0207705_10631477	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300025922\|Ga0207646_11632755	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300026312\|Ga0209153_1045675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1541	Open in IMG/M
3300026480\|Ga0257177_1050252	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300026489\|Ga0257160_1069956	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026551\|Ga0209648_10456512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	788	Open in IMG/M
3300026551\|Ga0209648_10655439	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300026557\|Ga0179587_10831878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300027587\|Ga0209220_1146469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	612	Open in IMG/M
3300027591\|Ga0209733_1156481	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300027604\|Ga0208324_1004442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5009	Open in IMG/M
3300027662\|Ga0208565_1078910	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300027669\|Ga0208981_1065235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	927	Open in IMG/M
3300027674\|Ga0209118_1038679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1440	Open in IMG/M
3300027737\|Ga0209038_10141976	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300027824\|Ga0209040_10308318	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300027854\|Ga0209517_10401704	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300027854\|Ga0209517_10634849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560	Open in IMG/M
3300027905\|Ga0209415_10425494	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300027905\|Ga0209415_10757098	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027911\|Ga0209698_10002563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20512	Open in IMG/M
3300027911\|Ga0209698_11351826	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300028869\|Ga0302263_10301801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	635	Open in IMG/M
3300028882\|Ga0302154_10459325	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300029889\|Ga0246001_1006140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4783	Open in IMG/M
3300029954\|Ga0311331_11425607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	569	Open in IMG/M
3300029956\|Ga0302150_10264615	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300029998\|Ga0302271_10126190	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300030399\|Ga0311353_10105093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2743	Open in IMG/M
3300030580\|Ga0311355_10638996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	999	Open in IMG/M
3300030659\|Ga0316363_10142492	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300030706\|Ga0310039_10304787	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300030707\|Ga0310038_10032323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3111	Open in IMG/M
3300030707\|Ga0310038_10154847	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031028\|Ga0302180_10385309	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031234\|Ga0302325_11339809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	937	Open in IMG/M
3300031236\|Ga0302324_101160234	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031236\|Ga0302324_101897268	Not Available	752	Open in IMG/M
3300031249\|Ga0265339_10448121	Not Available	599	Open in IMG/M
3300031474\|Ga0170818_109979231	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300031708\|Ga0310686_100206851	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300031708\|Ga0310686_113256043	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300031754\|Ga0307475_10559023	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031918\|Ga0311367_12158046	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.47%
Host-Associated	Host-Associated	2.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.66%
Aquatic	Environmental → Aquatic	34.81%
Plants	Host-Associated → Plants	2.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.16%
Freshwater	Environmental → Aquatic → Freshwater	29.11%
Peat	Environmental → Terrestrial → Peat	9.49%
Sediment	Environmental → Aquatic → Sediment	5.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.49%
Loam	Environmental → Terrestrial → Soil → Loam	8.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.16%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.27%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.16%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.27%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.27%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004972	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_100498751	3300000574	Groundwater	QTVHGIWFEFRGTVERGEGKKAGDEAYYVLKGTLTENATDEAKKTTSRSREVALKSFPQEVSPAPEKRN*
JGI12659J15293_100064604	3300001546	Forest Soil	ERGEGKNHGDEAFYVLKGILTEDTTDDAKKASSQSHEVALKSFPQGMAPPPAGK*
JGIcombinedJ26739_1002026871	3300002245	Forest Soil	RGEGKNHGDEAFYVLKGILTEDTTDDAKKASSQSHEVALKSFPQGMAPPPAGK*
Ga0062385_109374561	3300004080	Bog Forest Soil	VERGAGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALTSFPQDLATPQAEKK*
Ga0062387_1014558651	3300004091	Bog Forest Soil	RGEGKSQGDEAYYVLKGTLVENTTDDAKKTSSRSRQVALKAFPHDMSR*
Ga0062389_1033961541	3300004092	Bog Forest Soil	TETVHAVWFEFRGMIDRGTGRNPGDEAYYVLKGTLIENTTEETQKTSARSIEVALKSFPQDLSSGQAPTK*
Ga0072325_12483911	3300004972	Peatlands Soil	ERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK*
Ga0070658_108144452	3300005327	Corn Rhizosphere	FAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD*
Ga0070687_1013368902	3300005343	Switchgrass Rhizosphere	VWFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD*
Ga0070710_108979171	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EFTGTVDRGPGKQPGDEAYYVLNGRLVEHTTGADKKTSSLSREVALKSFPQDMAPSPQKKD*
Ga0070707_1002140791	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GTVERGEGKSRGDEAYYVLKGALVENTSDEAKKTSSHSREVELKSFPQDMAPPQAEKK*
Ga0070698_1006812592	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VHGVSFEFRGTVERGGGKSRGDEAYYVLKGTLIENTTDEAKKTSSRSREVALKSFPQDMAPPQAEKK*
Ga0066699_112166342	3300005561	Soil	ETVHGASFEFRGTIDRGEGKGRGDEAYYVLKGTLVESTTDEAKKTSSRSREVALKSFPQDMAPPREEKK*
Ga0070761_107037063	3300005591	Soil	TVHGVSFAFRGTVKRGEGKNPGDEAYYVLKGILVENLTDSASKTSATSHEVALKSFPQDVSSPRDEKK*
Ga0075293_10201932	3300005875	Rice Paddy Soil	DLGFTTQTVHGGWYEFKGMVERGAGKNPGDEAYYVLKGTLVQNTTDANKKTSAKSREVAFKSFPQDLDTPVQK*
Ga0066795_101435952	3300005938	Soil	KSRSDEAYYVLKGTLIENTTDETKKTASHSREVALKSFPQDASPPPERK*
Ga0075028_1007636371	3300006050	Watersheds	FRGSVERGEGKTSRDEAFYLLKGTLTENSTDANKKTTSHTREVALKSFPQDMSPEPAKRQ
Ga0075029_1000177581	3300006052	Watersheds	SFEFRGTVERGAGKNPGDEAYYVLKGTLIENNMDEGNKTSSHSREVSLKIFPQDLGSNPATNK*
Ga0075017_1002134381	3300006059	Watersheds	EVVHGLSYEFRGTIERGEGKNPGDEAYYLLKGTLIVTTIDSDKKASSRSTHVTLKSFPQDLAPTQAEKKK*
Ga0075015_1007989642	3300006102	Watersheds	TVGRGDGKNPGDEAYYVLKGTLVENTTDEAKKVSSRSLDVAFKSFPQDMSPPAPETK*
Ga0075030_1003190023	3300006162	Watersheds	LAHEFRGRVERGEGKNPGDEAYYVLRGILTENTVDDAKRTSSRSREVALRIFPRDLVPAQGVKK*
Ga0075030_1004838773	3300006162	Watersheds	LAHEFRGRVERGEGKNPGDEAYYVLKGTLTENRVDGEKKTSSRSMEVGLKRFPQDLGPAQGEKK*
Ga0075030_1006890421	3300006162	Watersheds	NHLTFMTEIVHGVSFEFRGTVGRGDGKNPGDEAYYVLKGTLVENTTDEAKKVSSRSLGVAFKSFPQDMSPPAPETK*
Ga0066659_105161751	3300006797	Soil	LDGNQLAFTTETVHGASFEFRGTVDRGEGKSRGDEAYYVLKGTVVENTTDEAKKTSSRSREVALKSFPQDMAPPRE*
Ga0099829_106883641	3300009038	Vadose Zone Soil	TVHGASFEFRGTIDRGEGKSRGDEAYYVLKGSLVENTTDESKKSSSRSRAVALKSFPQDMSPPQAEKK*
Ga0099830_117629791	3300009088	Vadose Zone Soil	VERGEGKSRGDEAYYVLKGTLVENTTDDAKKSSSHSREVALKSFPQDMAPPR*
Ga0116222_15223422	3300009521	Peatlands Soil	LSRASSMATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR*
Ga0116218_10043511	3300009522	Peatlands Soil	LTFTTETVQGVSFGFRGTIERGEGKSRGDEAYYVLKGTLVENTTDEVKKTSSHSREVVLKSFPQDVAPAQAEKK*
Ga0116218_11365261	3300009522	Peatlands Soil	TVERGEGKSRGDEAYYVLKGTLVENTTDEAQKTSSRSREVALKSFPQDMAPPQAERK*
Ga0116225_11046342	3300009524	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR*
Ga0116225_13043222	3300009524	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEARKTSSRSREALLKGFPQDLTSPQAEKK*
Ga0116111_10122951	3300009616	Peatland	TVERGEGKSRGDEAYYVLKGTLVDTTTGEAKKTSSRVRQVALKSFPQDMAPPPAERK*
Ga0116133_11026172	3300009623	Peatland	VTSETVRGVWFEFRGTVERGEGKSRSDEAYYVLKGTLVENTIDEAKKNSSHAREVMLKSFPQDLTPPPQPGKK*
Ga0116124_11387462	3300009634	Peatland	RWTVERCEGKSRCDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDLAPPQDQKM*
Ga0116122_11961481	3300009639	Peatland	TETVHGVSFEFRGTFERGEGKNRGDEAYYVLKGTLVENTTDEAKKTSSRPSEVALKSFPQDMAPHR*
Ga0116120_11717372	3300009641	Peatland	EFRGTVERGEGKSRGAEAYYVLKGTLVENATDEAKKTSSRLREVVLKSFPQDLAYPQSEKK*
Ga0116110_10930213	3300009643	Peatland	GTVERGEGKSRCDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDLAPPQDQKK*
Ga0116110_11662161	3300009643	Peatland	RGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSYRSQEVALKSFPQDLAPPRAERK*
Ga0116110_11820902	3300009643	Peatland	RGTIERGEGKSRGDEAYYVLKGTLVEKTTDEAKKTSSRSLEVVLKSFPQDLAPAPAEKK*
Ga0116224_100768783	3300009683	Peatlands Soil	DGNQLAFTTETAHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPQAEGK*
Ga0116217_102612962	3300009700	Peatlands Soil	FATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR*
Ga0116101_11809731	3300009759	Peatland	GKVERGEGKTRADEAFYVLKGTLTENATDNAKKTSSQSHEVALKSFPQNMPPPPPGKQ*
Ga0116134_10490463	3300009764	Peatland	ERGEGKSRGNEAFYVLKGTLVENTIDEAKKTSSHSREVALRSFPQDVAPPQQQKK*
Ga0116219_101163133	3300009824	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR*
Ga0116223_102453072	3300009839	Peatlands Soil	TVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0126379_118119571	3300010366	Tropical Forest Soil	IERGEGKKLGDEAYYVLKGTLTENSTDEAKKTSSRSREVGLKSFPQDLNPDHAERK*
Ga0136449_1029309152	3300010379	Peatlands Soil	ATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRTQEVALKSFPQNLTPGAEKPSVR*
Ga0150983_151221761	3300011120	Forest Soil	QLSFATEIVKGISFDFHGTIERGDGKNRPDEAYYVLRGSLVENTIDETKKTSFRSLQVVLKSFPQDVAPSPAEKK*
Ga0137363_107909982	3300012202	Vadose Zone Soil	ERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK*
Ga0137363_108385271	3300012202	Vadose Zone Soil	GEGKGRGDEAYYVLKGTLVESTTDEAKRTSSRSREVALKSFPQAMSPPREEKK*
Ga0137362_104006603	3300012205	Vadose Zone Soil	FEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK*
Ga0137379_108900312	3300012209	Vadose Zone Soil	FEFRGTVERGEGKKTGDEAYYVLKGTLTENATDEAKKTTSRSREVALKSFPQDMSPARP*
Ga0137377_111316481	3300012211	Vadose Zone Soil	DGNQLAFTTETVHGASFEFRGTVDRGEGKGRGDEAYYVLKGTLIENTTDEAKKTSSRSREVALKSFPQDMVPPREEKK*
Ga0137361_108750271	3300012362	Vadose Zone Soil	EFRGTIDRGEGKGRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPREQKE*
Ga0150984_1233690292	3300012469	Avena Fatua Rhizosphere	GVWFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSFSRSREVALKSFPQEMTPNAPKD*
Ga0137358_107951631	3300012582	Vadose Zone Soil	VERGEGKNRADEAYYVLKGTLIENTNDESKKTSSHSREVALKSFPQDLSPPPAKN*
Ga0137398_102620312	3300012683	Vadose Zone Soil	VHGASFEFRGTVDRGEGKGRGDEAYYVLKGTVVENTTDEAKKTSSRSRDVALKSFPQDMAPPQAEKR*
Ga0137396_107573412	3300012918	Vadose Zone Soil	EGKSRGDEAYYMLKGTLVENTIDEAKKSSSRSREVALKSFPQDMAPPQGQRE*
Ga0137419_109040142	3300012925	Vadose Zone Soil	DGNQLAFTTETVHGASFEFRGTVDRGDGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPQEQKK*
Ga0137419_114952001	3300012925	Vadose Zone Soil	DTVHGASFEFQGTVERGDGKSRGDEAYYVLKGTLVESTIDQAKKTSSRTREVALKSFPQDMAPPREQKK*
Ga0164304_110908101	3300012986	Soil	HGVWFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD*
Ga0120127_101515662	3300013503	Permafrost	LTFTTQLVHGVSFEFQGTIERGPGKNPGDEGYYVLKGRLIETTSDEANKTASHSREVAFKSFPQDLTR*
Ga0181524_103317941	3300014155	Bog	QLAFTTETVHGLSYEFRGTIERGEGKSRGDEAYYVLKGTLVENRTDEAKKTSSRSSQVALKGFPQDMAPPQAEKK*
Ga0181524_103885802	3300014155	Bog	GKSRAGEAYYVLKGTLVENTTGEAKKTSSHSREVVLKSFPQDLAPPQTEKKQAASP*
Ga0181538_100162891	3300014162	Bog	TVQGVSFEFRGTVERGEGKNRGDEAYYVLQGTLVENVTDAAKKTSSRSIEVALKSFPQDLTPPQAEKK*
Ga0182019_100220851	3300014498	Fen	GVWFEFRGTVERGEGKRRSDEAYYMLKGTLVENTTNEAKKTPSQSREVALKSFPQDVAPPQAEKK*
Ga0182024_111158781	3300014501	Permafrost	FHGTIERGEGKNHGDEAFYVLKGTLTVDATDDVKKASSQSHEVALKSFPQNMAPPPAGK*
Ga0182021_117499912	3300014502	Fen	FSTETVRGVWFEFRGAVERGEGKSRSDEAYYVLEGTLVENTIDEAKKTASRSREVALKSFPQDMAPPPADKK*
Ga0181536_102322302	3300014638	Bog	FEFRGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK*
Ga0181525_102038381	3300014654	Bog	KGISFDFRGTIERGEGKSRPDEAYYVLTGTLVEYTIDDTKKTSSRSLQVVLKSFPQDVAPSPAEKK*
Ga0137418_107364752	3300015241	Vadose Zone Soil	FEFHGTIERGDGKKSGDEGYYALKGTLTENSTDEAKKTTSRSREVALASFPQDVSPAASDKN*
Ga0137412_106300302	3300015242	Vadose Zone Soil	TTQAVHGIWFEFRGTIERGDGKNMGDEAYYVLRGTLTENTADEAKKTTSHSREVLLKSFPQDASPAKN*
Ga0181511_10156513	3300016702	Peatland	RGEGKSRGDEAYYSLKGTLVENTTDEAKKTSSRSSQVELKSFPQDMTPPEAEKK
Ga0187850_102827741	3300017941	Peatland	TETVHGVSFEFRGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK
Ga0187879_105995181	3300017946	Peatland	LAFATETVHGVSFEFRGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK
Ga0187879_107312062	3300017946	Peatland	GEGKSRSDEAYYVLKGTLVENTIDEAKKNSSHAREVMLKSFPQDLTPPPQPGKK
Ga0187817_102319783	3300017955	Freshwater Sediment	HGVSFEFRGTVERGEGKNPGDEAYYVLKGILIENITDETKKTSSRSREVALKSFPQDASPPQTEKK
Ga0187891_11797763	3300017996	Peatland	EFRGTVERGDGKSRGEEGYYILRGTLIENTTDEAKKTSSRSREVALRSFPQDVVPPQEQK
Ga0187870_11581061	3300017998	Peatland	VSFEFRGTVERGEGKSRGAEAYYVLKGTLVENATDEAKKTSSRLREVVLKSFPQDLAYPQSEKK
Ga0187868_11633021	3300018002	Peatland	TLDGNRLGFSTETVQGVSYEFRGTVERGEGKSRGDEAYYVLKGTLVENTPGDTKKTTSDSRQIVLESFPQDLALPPAEKK
Ga0187804_100999573	3300018006	Freshwater Sediment	TVHGVAFEFRGTVERGGGKSRSDEAYYVLKGILIETITDETKKTSSRSREVALRSFPQDMAAPPADGK
Ga0187884_101212812	3300018009	Peatland	QFQGTVEQGEGKSRADEAYYVLKGTLVENTTDAAKKISSRSVDVLLRSFPQDLAPPPPPTERK
Ga0187874_102776742	3300018019	Peatland	ETVHGVSFEFRGTFERGEGKNRGDEAYYVLKGTLVENTTDEAKKTSSRSSEVALKSFPQDMAPPPAEKK
Ga0187874_103285652	3300018019	Peatland	FEFQGTIERGEGKNHNEEAFYVLKGTLIEDTTDTARKTSSQSHEVMLKSFPQDMAPPPEG
Ga0187861_102377162	3300018020	Peatland	ETVKGVSFEFRGTIERGEGKSRGDEAYYVLKGTLVEKTTDEAKKTSSRSLEVVLKSFPQDLAPAPAEKK
Ga0187855_109460831	3300018038	Peatland	IERGEGKNRTDEAYYVLKGTLVEKTTDEAKKTSSHSHEVAWRSFPQDLAPPHTQNKTQDK
Ga0187871_101599301	3300018042	Peatland	EFHGTIERGEGKIRSDEGYYVLKGTLVENTIDTAKKTSSRALDVALKSFPQDLPPPQAGK
Ga0187887_101822982	3300018043	Peatland	SYEFRGTVERGEGKNAGDEAYYVLKGTLVENAIDQSKKTTSNSSAVVFKSFPRDMAHPVAEKK
Ga0187859_105293502	3300018047	Peatland	GVSFEFRGTIERGQGKNRADEAYYLLTGTLVEKTTDEAKKTSSHSHEVAWRSFPQDLAPPHTQNKTQDK
Ga0187772_106731231	3300018085	Tropical Peatland	HLAFTTEAMGGVAFEFRGTVERGEGKSRGDEAYYVLKGTLVENITDEAKKTSSRSQEVALRSFPQNLTPVAEKPSAK
Ga0187769_106153161	3300018086	Tropical Peatland	GVSFEFRGTVERGEGKDLGDEAYYVLRGTLVENSSDEAQKTSPRSRQVELKSFPQDLSP
Ga0066669_123926932	3300018482	Grasslands Soil	QVVHGVSFEFRGTVDRGDGKKTGDEAYYVLKGTLTETATDEAKKTSSRTREVALKSFPQDMSPPRP
Ga0187852_14141581	3300019082	Peatland	TVERGEGKGRGDEAYYVLKGTLAENITGDTKETSSHSRQIVFRSFPQDLAPAPAEKK
Ga0187798_12144142	3300019275	Peatland	LAYEFRGTVERGEGKNPGDEAYYVLKGTLIENTMDNTKKVSSRAMEVALKMFPQDLGSGPGQKK
Ga0187800_15443952	3300019278	Peatland	VSFEFHGAVERGEGKNPGDEAYYVLRGTLIENSMDEGKKTSSRTRQVALKMFPRDLGGKKEKK
Ga0187800_16070623	3300019278	Peatland	LTFTTETVHGLAYEFRGTVERGEGKNPGDEAYYVLKGTLIENTMDNTKKVSSRSMEVALKMFPQDLGSGPGQKK
Ga0187797_15097651	3300019284	Peatland	NRLTFATETVHGLAYEFRGAVERGEGKNPGDEAYYVLKGTLIENTMDNTKKVSSRAMEVALKMFPQDLGSGPGQKK
Ga0210406_112035922	3300021168	Soil	GEGKSPGTEAYYVLKGTLVENATDESKKVSSHSREVALKSFPQDMAPPAAEGK
Ga0210385_114125961	3300021402	Soil	RGTIDRGEGKNRGDEAYYVLKGTLVDNTIDEAKKASSHSSEVVLRSFPQNLASPQPEKK
Ga0210387_110839301	3300021405	Soil	VHGISFEFHGTIDRGEGKSRGDDAFYILKGTLTEKAIDEAKKSSSHAREVALKSFPQDVN
Ga0210394_104863741	3300021420	Soil	ARLDGDQLTFATETVHGKSFEFHGTIERGEGKNHGDEAFYVLKGILTEDTTDDAKKASSRSHEVALKSFPQDMAPPPAGK
Ga0210391_100281331	3300021433	Soil	SKLDGNQLSFATEIVKGISFDFHGTIERGDGKNRPDEAYYVLRGSLVENTIDETKKTSSRSLQVVLKSFPQDVAPSPAEKK
Ga0210392_101158061	3300021475	Soil	FTTEMVHGISFEFQGTIERGEGKNRGDEAFYVLKGTLTENSMDAAKKTSAHAREVALKSFPLSMDSPEAGNK
Ga0210409_103335941	3300021559	Soil	ETVHGASFEFRGTVDRGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPRK
Ga0242662_102551662	3300022533	Soil	VHGASFEFRGTIDRGEGKSRGDEAHYVLKGTLVENTTDESKKSSSRSREVALKSF
Ga0208034_10184333	3300025442	Peatland	VERGEGKSRGDEAYYVLKGTLVDTTTGEAKKTSSRVRQVALKSFPQDMAPPPAERK
Ga0208688_10024461	3300025480	Peatland	HGVSFEFRGTVERGEGKSRCDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDLAPPQDQKK
Ga0208191_10188961	3300025496	Peatland	TETVHGVSFEFRGTFERGEGKNRGDEAYYVLKGTLVENTTDEAKKTSSRPSEVALKSFPQDMAPHR
Ga0208191_10503341	3300025496	Peatland	TVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK
Ga0208819_10887751	3300025498	Peatland	RGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRTQEVALKSFPQDLAPPRAERK
Ga0208686_10133661	3300025500	Peatland	GEGKSRGDEAYYVLKGTLVENSTDEAKRTSSRSREVALKSFPQDLAPPSAEKK
Ga0208188_10933102	3300025507	Peatland	RGTIERGEGKSRGDEAYYVLKGTLVEKTTDEAKKTSSRSLEVVLKSFPQDLAPAPAEKK
Ga0207705_106314771	3300025909	Corn Rhizosphere	WFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD
Ga0207646_116327551	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VFTTQTVHGIWFEFHGTVDRGEGKKTGDEAYYVLKGTLTENATDEAKKTTSRSREVTLKSFPQDVSPAPTKEN
Ga0209153_10456751	3300026312	Soil	GIIDRGEGKNRDDEAYYVLKGTLTENAIDNNKSSSSRSREVALKSFPQDMTPNAPKD
Ga0257177_10502522	3300026480	Soil	VHGVSFEFRGTIERGEGKNRSDEAYYVLRGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK
Ga0257160_10699561	3300026489	Soil	DTVHGVSFEFHGTVERGEGKNRADEAYYVLKGTLIENTNDESKKTSSRSREVALKSFPQDLSPPPAKN
Ga0209648_104565122	3300026551	Grasslands Soil	EIVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK
Ga0209648_106554391	3300026551	Grasslands Soil	EFRGTIDRGEGKSRGDEAYYVLKGTLVENTTDESKKSSSRSRAVALKSFPQDMSPPQAEK
Ga0179587_108318782	3300026557	Vadose Zone Soil	VERGDGRKSGDEAYFVLKGTLIENSTDEAKKTTSRSREVALKSFPQDVSPAGR
Ga0209220_11464692	3300027587	Forest Soil	TTETVHGASFEFRGTIDRGEGKSRGDEAYYVLKGTLVENTTDEAKKSSSRSREVALKSFPQDMSPPQEQKK
Ga0209733_11564811	3300027591	Forest Soil	IDRGEGKSRGDEAYYVLKGTLVENTTDEAKKSSSRSREVALKSFPQDMASPREQKK
Ga0208324_10044421	3300027604	Peatlands Soil	LTFTTETVQGVSFGFRGTIERGEGKSRGDEAYYVLKGTLVENTTDEVKKTSSHSREVVLKSFPQDVAPAQAEKK
Ga0208565_10789102	3300027662	Peatlands Soil	KSRGDEAYYVVKGTLVENTTDEAKKTSSRSQEVALKSFPQDLTPPGAERLRVK
Ga0208981_10652353	3300027669	Forest Soil	DANQLAFTTDTVHGASFEFRGTIDRGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPQAQKK
Ga0209118_10386791	3300027674	Forest Soil	FEFQGTIDRGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMASPREQKK
Ga0209038_101419762	3300027737	Bog Forest Soil	ETVQGVSFEFRGTVERGEGKSRGDDAYYVLKGTLVENTTDEAKKTSSRSLEVVLKSFPQDLAPAQTEKK
Ga0209040_103083182	3300027824	Bog Forest Soil	NQIAFTTETVNGVSYEFRGTIERGEGKNRGDEDYYALRGTLVETTTDEVKKTSSRSLDVVLKSFPQDLDPQAEKK
Ga0209517_104017042	3300027854	Peatlands Soil	FEFRGTVERGEGKSRRDEAYYVLEGTLVENTTDEAKKTSSRSREVVLKSFPQDLAPAQAEKK
Ga0209517_106348491	3300027854	Peatlands Soil	ETVRGVSFEFRGTVERGTGKSRADEAYYVLHGTLLEHTTDEIKKTSSHSREVVLKSFPQDLAPPAQPEKK
Ga0209415_104254942	3300027905	Peatlands Soil	GVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0209415_107570982	3300027905	Peatlands Soil	TETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSRSQEVALKSFPQDLAPPRTGKLSVR
Ga0209698_100025631	3300027911	Watersheds	LAHEFRGRVERGEGKNPGDEAYYVLRGILTENTVDDAKRTSSRSREVALRIFPRDLVPAQGVKK
Ga0209698_113518262	3300027911	Watersheds	VHGISFEFRGAFERGEGRNPGDEAYYVLKGTLVENTSDEAQKTSSRSREVALRSFPRDLSPPPAQKE
Ga0302263_103018011	3300028869	Fen	VERGEGKKSGDEAFYVLKGTLTENSTDDSKKTTSRPREVALKSFPQDVSPAPAKRE
Ga0302154_104593251	3300028882	Bog	MSFDFRGTVERGAGVNPGDEEYYVLKGTLVEKTTDEVKKTSSRSLEVALKSFPRDLASPEADKK
Ga0246001_10061401	3300029889	Peat	VERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRTQEVALKSFPQDLAPPRAERK
Ga0311343_101542861	3300029953	Bog	SYDFRGTVERGEGKNAGDEAYYVLKGTLVENAIDQSKKTTSNSSAVVFKGFPRDMAHPVAEKK
Ga0311331_114256072	3300029954	Bog	FTSESVHGVSFEFKGTVERGAGKSRGDEGYYVLKGTLVENTADEAKKTSSHSREVVLKSFPQDLAPPPEKK
Ga0302150_102646151	3300029956	Bog	DAVHGMSFDFRGTVERGAGVNPGDEEYYVLKGTLVEKRTDEVKKTSSRSLEVALKSFPRDLASPEAEKK
Ga0302271_101261901	3300029998	Bog	HGVWFEFRGSVERGEGKKSGDEAFYVLKGTLTENSTDDSKKTTSRPREVALKSFPQDVSPAPAKRE
Ga0311353_101050931	3300030399	Palsa	QGVWYEFRGTVERGEGKSRGDEAYYALKGTLVENTTDEAKKTSSRSSEVALKSFPRDLAPPPQQQKK
Ga0311355_106389961	3300030580	Palsa	FTTKTVQGVWYEFRGTVERGEGKSRGDEAYYALKGTLVENTTDEAKKTSSRSSEVALKSFPRDLAPPPQQQKK
Ga0316363_101424922	3300030659	Peatlands Soil	ERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0310039_103047872	3300030706	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR
Ga0310038_100323231	3300030707	Peatlands Soil	QLAFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR
Ga0310038_101548471	3300030707	Peatlands Soil	SSMATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0302180_103853091	3300031028	Palsa	TTKPVQGVTFEFRGKIERGEGKNRDDEAFYLLQGTLVEKTTDETKKTSSRSRDVALKSFPRNLTSPQTQNK
Ga0302325_113398092	3300031234	Palsa	QLAFTTKTVQGVWYEFRGTVDRGEGKSRADEAYYVLKGTLIENTTDEAKKTSSQSSEVALKSFPQDLAPPQPQKK
Ga0302324_1011602341	3300031236	Palsa	EYRGTIERGEGKSRPDEAYYVLTGTLVEYTIDDTKKTSSRSLQVVLKSFPQDVAPSPAEK
Ga0302324_1018972681	3300031236	Palsa	TVQGVWYEFRGTVERGEGKSRGDEAYYTLKGTLIENTTDDAKKTSSQSSDVALKSFPQDLAPPPQQPKK
Ga0265339_104481212	3300031249	Rhizosphere	TKTVHGVSYEFRGTVDRGASQNPGEEAYYVLRGTLVVNTIDDAKKTSSHSQEVALKSFPQDVNPTPAEKK
Ga0302140_103333731	3300031261	Bog	LSFTTDAVHGVSYDFRGTVERGDGKNAGDEGYYVLKGTLVENTIDQSKKTTSNSSAVVFKGFPREMAPPVAEKK
Ga0170818_1099792311	3300031474	Forest Soil	EGKNRADEAYYVLKGTLIENTNDESKKTSSRSQEVALKSFPKDLSPPPAKN
Ga0310686_1002068513	3300031708	Soil	SFEFHGTIERGEGKTRGDEAFYLLKGTLTENATDNANKTSSQSHQVALKSFPQDMAPPPSDKQ
Ga0310686_1132560433	3300031708	Soil	ETVRGISFEFRGTVERGEGKSRGDEAYYVLKGTLVENTIDEAKKNSSRLLDVVLKSFPQNAAPAQAEKK
Ga0307475_105590231	3300031754	Hardwood Forest Soil	FRGTVDRGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMSPPRK
Ga0311367_121580461	3300031918	Fen	VHGIWFEFRGTVGRGDGKKAGDEAYYVLRGTLIENFTDDAKKTTSHSREVGLKSFPQDMSPEVPAKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042232

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences