Metagenome Family F042201

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042201
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	71 residues
Representative Sequence	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAETRILD
Number of Associated Samples	106
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.59 %
% of genes near scaffold ends (potentially truncated)	27.22 %
% of genes from short scaffolds (< 2000 bps)	89.87 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.696 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.279 % of family members)
Environment Ontology (ENVO)	Unclassified (36.076 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.772 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.29% β-sheet: 21.21% Coil/Unstructured: 49.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
e.8.1.1: DNA polymerase I	d1q8ia2	1q8i	0.7649
e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain	d1jiha2	1jih	0.76356
e.8.1.0: automated matches	d4ahca2	4ahc	0.75424
d.58.31.0: automated matches	d7b1sb1	7b1s	0.75281
e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain	d3gv7b1	3gv7	0.7496

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF00990	GGDEF	7.59
PF01569	PAP2	6.96
PF01266	DAO	5.70
PF01544	CorA	4.43
PF01734	Patatin	3.80
PF07690	MFS_1	3.80
PF01935	DUF87	3.80
PF13442	Cytochrome_CBB3	3.16
PF01391	Collagen	1.90
PF00274	Glycolytic	1.27
PF14417	MEDS	1.27
PF00196	GerE	1.27
PF00155	Aminotran_1_2	0.63
PF00903	Glyoxalase	0.63
PF08545	ACP_syn_III	0.63
PF04828	GFA	0.63
PF01965	DJ-1_PfpI	0.63
PF00437	T2SSE	0.63
PF02899	Phage_int_SAM_1	0.63
PF00326	Peptidase_S9	0.63
PF01476	LysM	0.63
PF07366	SnoaL	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	4.43
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	3.80
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	3.80
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	3.80
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	1.27
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.63
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.63
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.33 %
Unclassified	root	N/A	43.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.33 %
Unclassified	root	N/A	43.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.70 %
Unclassified	root	N/A	43.67 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.84 %
Unclassified	root	N/A	43.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.94 %
Unclassified	root	N/A	43.67 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.09 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.90 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.82 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.90 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.82 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0584644	Not Available	629	Open in IMG/M
3300000890\|JGI11643J12802_11869106	Not Available	1328	Open in IMG/M
3300000956\|JGI10216J12902_106794956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300000956\|JGI10216J12902_109225176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300004156\|Ga0062589_100079092	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1997	Open in IMG/M
3300004156\|Ga0062589_100171613	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300004156\|Ga0062589_102170477	Not Available	568	Open in IMG/M
3300004157\|Ga0062590_100454510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300004463\|Ga0063356_104940466	Not Available	573	Open in IMG/M
3300005168\|Ga0066809_10027164	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300005328\|Ga0070676_10972206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300005329\|Ga0070683_102155913	Not Available	535	Open in IMG/M
3300005336\|Ga0070680_100895865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300005354\|Ga0070675_100972541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300005355\|Ga0070671_100831109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300005438\|Ga0070701_10420117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300005441\|Ga0070700_100380823	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005455\|Ga0070663_101217981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300005471\|Ga0070698_100999280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300005518\|Ga0070699_100117025	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300005518\|Ga0070699_100210114	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300005543\|Ga0070672_100264366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1451	Open in IMG/M
3300006876\|Ga0079217_10107394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300006894\|Ga0079215_10957500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300006918\|Ga0079216_10161494	Not Available	1181	Open in IMG/M
3300006918\|Ga0079216_11300106	Not Available	594	Open in IMG/M
3300007004\|Ga0079218_11214972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300009094\|Ga0111539_11873951	Not Available	695	Open in IMG/M
3300009147\|Ga0114129_13038658	Not Available	550	Open in IMG/M
3300009148\|Ga0105243_10719654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300009177\|Ga0105248_13136035	Not Available	526	Open in IMG/M
3300009789\|Ga0126307_10592269	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300010044\|Ga0126310_11512461	Not Available	551	Open in IMG/M
3300010045\|Ga0126311_10785530	Not Available	767	Open in IMG/M
3300010166\|Ga0126306_10553989	Not Available	913	Open in IMG/M
3300010166\|Ga0126306_11666556	Not Available	532	Open in IMG/M
3300010400\|Ga0134122_11453672	Not Available	702	Open in IMG/M
3300011400\|Ga0137312_1019688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300011423\|Ga0137436_1138243	Not Available	652	Open in IMG/M
3300012043\|Ga0136631_10052234	Not Available	1524	Open in IMG/M
3300012045\|Ga0136623_10104018	Not Available	1239	Open in IMG/M
3300012045\|Ga0136623_10341448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300012091\|Ga0136625_1240916	Not Available	612	Open in IMG/M
3300012186\|Ga0136620_10043532	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300012530\|Ga0136635_10023117	Not Available	1838	Open in IMG/M
3300012530\|Ga0136635_10049220	Not Available	1274	Open in IMG/M
3300012668\|Ga0157216_10010555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5030	Open in IMG/M
3300012668\|Ga0157216_10212723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300012680\|Ga0136612_10009702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4744	Open in IMG/M
3300012684\|Ga0136614_10233205	Not Available	1379	Open in IMG/M
3300012893\|Ga0157284_10069173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300012893\|Ga0157284_10093702	Not Available	772	Open in IMG/M
3300012907\|Ga0157283_10123818	Not Available	727	Open in IMG/M
3300012951\|Ga0164300_10696101	Not Available	615	Open in IMG/M
3300014325\|Ga0163163_10633901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300015371\|Ga0132258_11562760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1666	Open in IMG/M
3300015372\|Ga0132256_100519005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1302	Open in IMG/M
3300015372\|Ga0132256_102729580	Not Available	593	Open in IMG/M
3300015373\|Ga0132257_101488505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300015373\|Ga0132257_102864202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300017695\|Ga0180121_10000841	All Organisms → cellular organisms → Bacteria	12996	Open in IMG/M
3300017789\|Ga0136617_10379268	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300017789\|Ga0136617_11401211	Not Available	522	Open in IMG/M
3300017997\|Ga0184610_1147143	Not Available	772	Open in IMG/M
3300018031\|Ga0184634_10524476	Not Available	527	Open in IMG/M
3300018053\|Ga0184626_10055351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1664	Open in IMG/M
3300018053\|Ga0184626_10150228	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300018054\|Ga0184621_10093958	Not Available	1055	Open in IMG/M
3300018056\|Ga0184623_10174729	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300018073\|Ga0184624_10099262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1244	Open in IMG/M
3300018073\|Ga0184624_10368162	Not Available	642	Open in IMG/M
3300018078\|Ga0184612_10124631	Not Available	1348	Open in IMG/M
3300018081\|Ga0184625_10301110	Not Available	837	Open in IMG/M
3300018081\|Ga0184625_10443890	Not Available	665	Open in IMG/M
3300018422\|Ga0190265_10199608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2009	Open in IMG/M
3300018422\|Ga0190265_10259071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1790	Open in IMG/M
3300018422\|Ga0190265_10721424	Not Available	1119	Open in IMG/M
3300018422\|Ga0190265_11170877	Not Available	888	Open in IMG/M
3300018422\|Ga0190265_11303525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300018422\|Ga0190265_13289510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300018429\|Ga0190272_10134101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1670	Open in IMG/M
3300018429\|Ga0190272_10489296	Not Available	1040	Open in IMG/M
3300018429\|Ga0190272_10789950	Not Available	872	Open in IMG/M
3300018429\|Ga0190272_11717126	Not Available	650	Open in IMG/M
3300018429\|Ga0190272_11829150	Not Available	635	Open in IMG/M
3300018429\|Ga0190272_13338396	Not Available	501	Open in IMG/M
3300018466\|Ga0190268_10079706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1438	Open in IMG/M
3300018466\|Ga0190268_10132761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300018466\|Ga0190268_10473391	Not Available	839	Open in IMG/M
3300018469\|Ga0190270_10021188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4017	Open in IMG/M
3300018469\|Ga0190270_10021710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3979	Open in IMG/M
3300018469\|Ga0190270_10203245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300018469\|Ga0190270_10260894	Not Available	1515	Open in IMG/M
3300018469\|Ga0190270_10519725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1140	Open in IMG/M
3300018469\|Ga0190270_10717074	All Organisms → cellular organisms → Bacteria → Terrabacteria group	994	Open in IMG/M
3300018469\|Ga0190270_10949739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300018469\|Ga0190270_11330984	Not Available	762	Open in IMG/M
3300018469\|Ga0190270_11352253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	757	Open in IMG/M
3300018469\|Ga0190270_11624976	Not Available	698	Open in IMG/M
3300018469\|Ga0190270_12608327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300018476\|Ga0190274_10481079	Not Available	1234	Open in IMG/M
3300018481\|Ga0190271_10049933	All Organisms → cellular organisms → Bacteria	3554	Open in IMG/M
3300018481\|Ga0190271_10075726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2994	Open in IMG/M
3300018481\|Ga0190271_10119424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2477	Open in IMG/M
3300018481\|Ga0190271_10957850	Not Available	980	Open in IMG/M
3300019356\|Ga0173481_10345384	All Organisms → cellular organisms → Bacteria → Terrabacteria group	709	Open in IMG/M
3300019356\|Ga0173481_10541802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300019361\|Ga0173482_10608667	Not Available	550	Open in IMG/M
3300019377\|Ga0190264_10011987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2623	Open in IMG/M
3300019377\|Ga0190264_10151228	Not Available	1197	Open in IMG/M
3300019377\|Ga0190264_10709486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300019377\|Ga0190264_11007791	Not Available	666	Open in IMG/M
3300019767\|Ga0190267_10319536	Not Available	817	Open in IMG/M
3300022756\|Ga0222622_10920218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300022883\|Ga0247786_1079319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300023263\|Ga0247800_1131880	Not Available	528	Open in IMG/M
3300023266\|Ga0247789_1106817	Not Available	561	Open in IMG/M
3300025893\|Ga0207682_10345452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300025901\|Ga0207688_10937978	Not Available	548	Open in IMG/M
3300025937\|Ga0207669_10159050	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300025937\|Ga0207669_10654951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300025938\|Ga0207704_10552901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300025940\|Ga0207691_10725685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300026690\|Ga0207494_100453	Not Available	791	Open in IMG/M
3300028379\|Ga0268266_10080351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2841	Open in IMG/M
3300028587\|Ga0247828_10439059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300028589\|Ga0247818_10135420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1603	Open in IMG/M
3300028589\|Ga0247818_10823592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300028592\|Ga0247822_11655547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300028596\|Ga0247821_10084252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1772	Open in IMG/M
3300028787\|Ga0307323_10106457	Not Available	1007	Open in IMG/M
3300028793\|Ga0307299_10337154	Not Available	566	Open in IMG/M
3300028796\|Ga0307287_10138028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300028802\|Ga0307503_10068197	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300028802\|Ga0307503_10771372	Not Available	546	Open in IMG/M
3300028875\|Ga0307289_10195130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300030006\|Ga0299907_10061367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3018	Open in IMG/M
3300030336\|Ga0247826_11394204	Not Available	566	Open in IMG/M
3300031226\|Ga0307497_10766281	Not Available	504	Open in IMG/M
3300031229\|Ga0299913_10101799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2805	Open in IMG/M
3300031229\|Ga0299913_10475304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300031229\|Ga0299913_11015975	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	795	Open in IMG/M
3300031229\|Ga0299913_12092488	Not Available	511	Open in IMG/M
3300031548\|Ga0307408_101685132	Not Available	604	Open in IMG/M
3300031548\|Ga0307408_102405033	Not Available	511	Open in IMG/M
3300031852\|Ga0307410_10559153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300031903\|Ga0307407_10584324	Not Available	830	Open in IMG/M
3300031908\|Ga0310900_11953241	Not Available	501	Open in IMG/M
3300031911\|Ga0307412_10352726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1182	Open in IMG/M
3300031940\|Ga0310901_10204477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300031995\|Ga0307409_102291869	Not Available	569	Open in IMG/M
3300032002\|Ga0307416_100149261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2141	Open in IMG/M
3300032012\|Ga0310902_10715399	Not Available	676	Open in IMG/M
3300032013\|Ga0310906_10591807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300033550\|Ga0247829_10235498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1468	Open in IMG/M
3300033551\|Ga0247830_10883268	Not Available	712	Open in IMG/M
3300034164\|Ga0364940_0183668	Not Available	609	Open in IMG/M
3300034384\|Ga0372946_0317703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.01%
Host-Associated	Host-Associated	18.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.56%
Plants	Host-Associated → Plants	18.99%
Aquatic	Environmental → Aquatic	16.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.56%
Sediment	Environmental → Aquatic → Sediment	8.86%
Freshwater	Environmental → Aquatic → Freshwater	7.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.80%
Floodplain	Environmental → Terrestrial → Floodplain	0.63%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.86%
Ice	Environmental → Aquatic → Freshwater → Ice	7.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.96%
Loam	Environmental → Terrestrial → Soil → Loam	4.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.23%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	7.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.53%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.28%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	7.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.43%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.27%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.63%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026690	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-11 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05846441	2228664021	Soil	MQIHVKDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNEHAKTRILD
JGI11643J12802_118691064	3300000890	Soil	MQIHVKDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNEHAKTRILD*
JGI10216J12902_1067949561	3300000956	Soil	MRIHLSDQDLVPSLLAFLREHVHVTADPVGPHEIEVSQLGSQHAEGRRLELDLMLQVWRASHA
JGI10216J12902_1092251761	3300000956	Soil	MQIHISDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNSAKRRLEVDLMLQLWRASNEHADTRILD*
Ga0062589_1000790922	3300004156	Soil	LVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAETRILD*
Ga0062589_1001716132	3300004156	Soil	MRIEVSDPQLVPSLLAFLTGHVHVNAEQVGPREVEISQLGSMNAEGRRLELDLMLQVWRASNTDASASILL*
Ga0062589_1021704772	3300004156	Soil	DPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNEHAKTRILD*
Ga0062590_1004545102	3300004157	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAETRILD*
Ga0063356_1049404662	3300004463	Arabidopsis Thaliana Rhizosphere	MRIEVSDPQLVPSLLAFLCGHVHVNAQQVGPQEVEISQLGSMNARGRRMELDLMLQVWRKSNQLA
Ga0066809_100271642	3300005168	Soil	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHAETRILS*
Ga0070676_109722061	3300005328	Miscanthus Rhizosphere	MQIHVSDPDLVPSLLEFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAETRILD*
Ga0070683_1021559131	3300005329	Corn Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHVET
Ga0070680_1008958652	3300005336	Corn Rhizosphere	TLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHVETRILA*
Ga0070675_1009725412	3300005354	Miscanthus Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRA
Ga0070671_1008311091	3300005355	Switchgrass Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHVETRILA*
Ga0070701_104201172	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAETRILD*
Ga0070700_1003808232	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHVETRILA*
Ga0070663_1012179812	3300005455	Corn Rhizosphere	MQIHVSDPDLVPSLLEFLRERVHVIADQLGPNEVEVSLLGSMNTAKRRLELDLMLQLCSGGLRGP*
Ga0070698_1009992802	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRIQVSDPQVVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRMELDLMLQVWRTSNTHASASILV*
Ga0070699_1001170256	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRIHLTDRHLVPSLLAFMREHVHVTADRVGPQEIEVSQLGSQHAAGRRLELDLLLQTWRASHASVETRILD*
Ga0070699_1002101142	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRIQVSDPQVVPSLLAFLTGHVHVNAEQVGPAEVEISQLGSMNARGRRMELDLMLQVWRASNTHASASILV*
Ga0070672_1002643661	3300005543	Miscanthus Rhizosphere	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAE
Ga0079217_101073943	3300006876	Agricultural Soil	MRIEINDPELVPSLLAFLRERVHLNADQVGPTEVEVSQLGSMNLEARRVELDLLLQVWRTSHASVRTAILD*
Ga0079215_109575001	3300006894	Agricultural Soil	SLLAFLRERVHLNADQVGPTEVEVSQLGSMNLEARRVELDLLLQVWRTSHASVRTAILD*
Ga0079216_101614943	3300006918	Agricultural Soil	MRIEINDPELVPSLLAFLRERVHLNADQVGPTEVEVSRLGSMNLEARRVELDLLLQVWRTSHASVRTAILD*
Ga0079216_113001062	3300006918	Agricultural Soil	MRIHTSDPELVPSLLAFLRERAHVVAEQIGLHEIEVSQLGSMSASGRRLELDLMLQVWRASHERVETLILD*
Ga0079218_112149721	3300007004	Agricultural Soil	MRIEINDPELVPSLLAFLRERVHLNADRLGPVEIEVSQLGSMNRDARRVELDLLLQVWRASHENARTSILD*
Ga0111539_118739511	3300009094	Populus Rhizosphere	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNSAKRRLEVDLMLQLWRASNEHAETRILD*
Ga0114129_130386581	3300009147	Populus Rhizosphere	MRIHLTDRHLVPSLLTFMREHVHVTADRVGPQEIEVSQLGSQHAAGRRLELDLLLQTWRASHGCVETRILD*
Ga0105243_107196542	3300009148	Miscanthus Rhizosphere	LAAMQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHVETRILA*
Ga0105248_131360351	3300009177	Switchgrass Rhizosphere	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRA
Ga0126307_105922691	3300009789	Serpentine Soil	MRIHLSDQDLVPSLLAFLRGHVHVTADPVGPHEIEVSQLGSLHAEGRRLELDLMLQVWRASHT
Ga0126310_115124611	3300010044	Serpentine Soil	MRIHLTDRDLVPSLLAFMREHVHVTADRIGPQEIEVSQLGSQHAEGRRLELDLLLQTWRASHGSVETRILD*
Ga0126311_107855301	3300010045	Serpentine Soil	MRIHVSDRELVPSLLAFLREHVHVTAEQVDVDEIEVSQLGSLHAQGRRLELDLMLQVWRASHERAETRILD*
Ga0126306_105539891	3300010166	Serpentine Soil	MRIHTSDPELVPSLLAFLRERAHVVAEQVGLHEIEVSQLGSKNASERRLELDLMLQVWRAAHERVETLILD*
Ga0126306_116665562	3300010166	Serpentine Soil	MRIRVSDPQLVPSLLSFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRLELDLMLQVWCASNTNASASIVREPS*
Ga0134122_114536722	3300010400	Terrestrial Soil	MRIEVSDPQLVPSLLAFLTGHVHVNAEQVGPREVEISQLGSMNAKGRRLELDLMLQVWRASNTDASVSILL*
Ga0137312_10196883	3300011400	Soil	EEDAASSLRHMRIHLSDEDLVPSLLAYLREHVHVTADPVGPQEIEVSQLGSQHAEGRRLELDLMLQVWRASHGPVETRILD*
Ga0137436_11382431	3300011423	Soil	MRIQVSDPQVVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRLELDLMLQVWRAANTHASASILV*
Ga0136631_100522343	3300012043	Polar Desert Sand	SAPQLVPSLLTFLRGHHHVTAAQVAPQEIEVSQLGSLHAAGRRLELDLLLEVWRASHARAETRILT*
Ga0136623_101040183	3300012045	Polar Desert Sand	MLVRLGDAAFPRFAAHVRIQLSDPQLVPSLLTFLREHHHVTAAQVAPQEIEVSQLGSLHAAGRRLELDLLLEGWRASHARAETRILT*
Ga0136623_103414483	3300012045	Polar Desert Sand	TNDPRLVLAFLRDRVHVVADQVGPQEVEVSQLGSVNAGERRLELDLMLEVCRASHDLAEARILD*
Ga0136625_12409162	3300012091	Polar Desert Sand	VRIQLSDPQLVPSLLTFLRGHHHVTAAQVAPQEIEVSQLGSLHAAGRRLELDLLLEVWRASHARAETRILT*
Ga0136620_100435322	3300012186	Polar Desert Sand	MRVQLSDPHLVPSLLAFLREHVHVDAAHVGPQEIEVSQLGSLNAAGRRLELDLLLQVWGASHAPAETRILD*
Ga0136635_100231173	3300012530	Polar Desert Sand	VRIQLSDPQLVPSLLTFLREHHHVTAAQVAPQEIEVSQLGSLHAAGRRLELDLLLEVWRASHARAETRILT*
Ga0136635_100492201	3300012530	Polar Desert Sand	MRIQLSDPHLVPSLLAFLREHVHVAADHVGPQEIEVSQLGSQNAAGRRLELDLLLGVWRASHGLAETRILD*
Ga0157216_100105558	3300012668	Glacier Forefield Soil	MRIHLSDRQLAPSLLAFLREHVHVTAAHVGPQELEVSQLGSLDAAGRRIELDLLLQVWRTSHAPVETRILD*
Ga0157216_102127232	3300012668	Glacier Forefield Soil	MRIEVGEPHLVPSLLGFLRGHVHLNAEQIGPMAIEVSQLGSMNWGARRLELDLMLQVWRTSHAQAAAAIVD*
Ga0136612_100097026	3300012680	Polar Desert Sand	MLVRLGDAAFPRFAAHVRIQLSDPQLVPSLLTFLREHHHVTAAQVAPQEIEVSQLGSLHAAGRRLELDLLLEVWRASHARAETRILT*
Ga0136614_102332053	3300012684	Polar Desert Sand	VRIQLSDPQLVPSLLTFLREHHHVTAAQVAPQEIEVSQLGSLHAAGRRLELDRLLEVWRASHARAETRILT*
Ga0157284_100691732	3300012893	Soil	MQIHVKDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAETRILD*
Ga0157284_100937021	3300012893	Soil	MRIHLTDRHLIPSLLAFMREHVHVTADRVGPQEIEVSQLGSQHAAGRRLELDLLLQTWRASHASVETRILD*
Ga0157283_101238181	3300012907	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAQTRILD*
Ga0164300_106961011	3300012951	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTANRRLELDLMLQVWRASNENAETRILD*
Ga0163163_106339012	3300014325	Switchgrass Rhizosphere	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLW
Ga0132258_115627602	3300015371	Arabidopsis Rhizosphere	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEVEVSLLGSMNTAKRRLELDLMLQLWRASNENAETRILD*
Ga0132256_1005190052	3300015372	Arabidopsis Rhizosphere	MQIYVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNSAKRRLEVDLMLQLWRASNEQAETRILD*
Ga0132256_1027295802	3300015372	Arabidopsis Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGVKRRLELDLMLQLWRASHEHVETRILA*
Ga0132257_1014885052	3300015373	Arabidopsis Rhizosphere	MQIHVSDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGVKRRLELDLMLQLWRASHEHVETRILA*
Ga0132257_1028642022	3300015373	Arabidopsis Rhizosphere	MQIHVTDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLRLWRASNEHAETRILD*
Ga0180121_1000084112	3300017695	Polar Desert Sand	MRIQLSDPHLVPSLLAFLREHVHVAADHVGPQEIEVSQLGSQNAAGRRLELDLLLGVWRASHGLAETRILD
Ga0136617_103792682	3300017789	Polar Desert Sand	MRIQLSDPHLVPSLLAFLREHVHVAADHVGPQEIEVSQLGSLNAAGRRLELDLLLQVWGASHAPAETRILD
Ga0136617_114012111	3300017789	Polar Desert Sand	MLVRLGDAAFPRFAAHVRIQLSDPQLVPSLLTFLREYHHVTAAQVAPQEIEVSQLGSLHAAGRRVELDLLLEVWRASHARAETRILT
Ga0184610_11471431	3300017997	Groundwater Sediment	PSLLAFLREHVHVTADPVGPQEIEVSQLGSLHADGRRLELDLMLQVWRASHGPVETRILD
Ga0184634_105244762	3300018031	Groundwater Sediment	MRIQVSDPQLVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRMELDLMLEVWRASNTHASASIVG
Ga0184626_100553512	3300018053	Groundwater Sediment	MRIQVSDPQLVPSLLSFLTGHVHVNAEQIGPTEVEISQLGSMNARGRRMELDLMLQVWRASNAHASASIVG
Ga0184626_101502282	3300018053	Groundwater Sediment	MRIHLSDQDLVPNLLAFLREHVHVTADPVGPHEIEVSQLGSLHAEGRRLELDLLLQVWRASHTSIETRILD
Ga0184621_100939582	3300018054	Groundwater Sediment	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPREVEISQLGSMNARGRRMELDLMLQVWRASNTHASASILV
Ga0184623_101747292	3300018056	Groundwater Sediment	MLEEDAASSLRHMRIHLSDQDLVPSLLAFLREHVHVTADPVGPQEIEVSQLGSLHADGRRLELDLMLQVWRASHGPVETRILD
Ga0184624_100992621	3300018073	Groundwater Sediment	MQIYVNDHTLVPSLLAFLRERVHVIADQIGPNEVEVSLLGSMNSPKRRLELDLMLQLWRTQHELVETRILD
Ga0184624_103681622	3300018073	Groundwater Sediment	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRLELDLMLQVWRASNTDASASIVL
Ga0184612_101246311	3300018078	Groundwater Sediment	MRIHVSDRHLVPSLLAFLREHIHVTADQVGVDEIEVSQLGSLHAAGRRLELDLLLQVWRASHERAETRILD
Ga0184625_103011101	3300018081	Groundwater Sediment	QSLVPSLLAFLRARVHVIADQIGPNEVEVSLLGSMNSPKRRLELDLMLQLWRTQHELVETRILD
Ga0184625_104438902	3300018081	Groundwater Sediment	MRIQVSDPQFVPSLLSFLTGHVHVNAEQIGPTEVEISQLGSMNARGRRMELDLMLQVWRASNTHASASILV
Ga0190265_101996085	3300018422	Soil	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRMELDLMLQVWRASNTHASASIVLEPS
Ga0190265_102590713	3300018422	Soil	MRIHLSDRDLIPSLLAFLREHVHVTADLAGPDEIEVSQLGSQHAAGRRLELDLMLQVWRASHGCVETRILD
Ga0190265_107214243	3300018422	Soil	MRIEINDPELVPSLLAFLRERVHLNADRLGPCEVEVSQLGSMNQDARRVELDLLLQVWRASHENARTSILD
Ga0190265_111708772	3300018422	Soil	MRIQVSEPRFVPSLLAFLTGHVHVNAEQVGPLEVEISQLGSMNARGRRMELDLMLQVWRASNDLATAEILS
Ga0190265_113035252	3300018422	Soil	PSLLAFLRERVHLNADRLGPVEVEVSQLGSMNRDARRVELDLLLQVWRASHENARTSILD
Ga0190265_132895101	3300018422	Soil	EINDPELVPSLLAFLRERVHLNADRLGPVEVEVSQLGSMNRDARRVELDLLLQVWRASHENARTSILD
Ga0190272_101341014	3300018429	Soil	MLSRRRTSRPSCGLMRITVNDPQLVPSLLSFLRARVHVTAEQVGIMEVEISQLGSMNADARRLELDLLLQLWRASHADARTAILD
Ga0190272_104892962	3300018429	Soil	MRIHLSDRDLIPSLLAFLREHVHVTADLAGPHEIEVSQLGSQHAAGRRLELDLLLQVWRASHGCVETRILD
Ga0190272_107899501	3300018429	Soil	MQIHVSDPTLVPSLLAFLRERVHVIADQIGPSEVEVSLLGSMNAPKRRLELDLMLQLWRTAHEQVETRILD
Ga0190272_117171261	3300018429	Soil	DQDATSSLQRMRIHLSDRDLIPSLLAFLREHVHVTADLAGPHEIEVSQLGSQHAAGRRLELDLLLQVWRASHACVETRILD
Ga0190272_118291501	3300018429	Soil	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPTEIEISQLGSMNARGRRMELDLMLQVWRASNTHASASILV
Ga0190272_133383961	3300018429	Soil	MRIHLSDHHLVPSLLAFLRERVHVTADPVGLHEIEVSQLGSQHAAGRRLELDLMLQLWRTSQGPVETQIL
Ga0190268_100797063	3300018466	Soil	MLVEDAASSLRQVRIHLSDQDLVPSLLAFLREHVHVTADPVGPQEIEVSQLGSQHAEGRRLELDLMLQVWRASHGPVETRILD
Ga0190268_101327612	3300018466	Soil	MQIHVSDPTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNRPKRRLELDLMLQLWRTAHEQVETRILD
Ga0190268_104733911	3300018466	Soil	MLEEDAASSLRHMRIHLSDQDLVPSLLAFLREHVHVTADPVGPQEIEVSQLGSQHAEGRRLELDLMLQVWRASHGPVETRILD
Ga0190270_100211884	3300018469	Soil	VASSLRHMRIHLSDQDLVPSLLAYLREHVHVTADPVGPQEIEVSQLGSQHAEGRRLELDLMLQVWRASHGPVETKILD
Ga0190270_100217103	3300018469	Soil	MQIHVSDPALVPSLLDFLRERVHVIADQLGPNEVEVSLLGSMSTPKRRLELDLMLQLWRAANEHVEARILD
Ga0190270_102032452	3300018469	Soil	MQIHVSDHTLVPSLLAFLRERVHVIADQIGPNEVEVSLLGSMNGPKRRLELDLMLQLWRAAHEHAETQILD
Ga0190270_102608942	3300018469	Soil	MQIHVSDPTLVPSLLAFLRERVHVIADQIGPSEVEVSLLGSMNTAKRRLELDLMLQLWRTAHEQVETRILD
Ga0190270_105197254	3300018469	Soil	PSLLAFLTGHVHVNAQQVGPREVEISQLGSMNAHGRRLELDLMLQVWRASNDPASATIVN
Ga0190270_107170742	3300018469	Soil	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRMELDLMLQVWRASNGQASAAIVLEPS
Ga0190270_109497392	3300018469	Soil	MQIHISDPDLVPSLLTFLSARVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRATNEHAETRILD
Ga0190270_113309841	3300018469	Soil	NVVRVGMRIHLSNRDLIPSLLAFLREHVHVTADIAGPDEIEVSQLGSQHAAGRRLELDLLLQVWRASHGCVETRILD
Ga0190270_113522531	3300018469	Soil	MQIHVSDSTLVPNLLAFLRERVHVIADQIGQNEIEVSLLGSMNTAKRRLELDLMLQLWRTTHEQVETRILD
Ga0190270_116249762	3300018469	Soil	MRIEINDPELVPSLLAFLRERVHLNADRLGPVEVEVSQLGSMNRDARRVELDLLLQVWRASHENARTSILD
Ga0190270_126083271	3300018469	Soil	MRIHLSDRDLIPSLLAFLREHVHVTADLAGQHEIEVSQLGSQHAAGRRLELDLMLQVWRASHGCVKTRILD
Ga0190274_104810793	3300018476	Soil	MQIYVNDHTLVPSLLAFLRERVHVIADQIGPNEVEVSLLGSMNAPKRRLELDLMLQLWRATHE
Ga0190271_100499332	3300018481	Soil	MQIHISDPTLVPSLLDFLRERVHVIADQIGPHEVEVSLLGSMSTPKRRLELDLMLQLWRASNEQVSNEHIETRILD
Ga0190271_100757262	3300018481	Soil	MRIHLSDPELVPSLLAFLRERVHAVADQVGPDEIEVSLLGSKSAPERRLELDLLLQVWHAAHEHAVTRVLD
Ga0190271_101194243	3300018481	Soil	MRIHLSDPELIPSLLAFLRERVHAVADQVARDEIEVSLLGSKSAPERRLELDLLLQVWRASHEQVVTRVLD
Ga0190271_109578501	3300018481	Soil	MRIEINDPELVPSLLAFLRERVHLNADRLGPVEVEVSQLGSMNRDARRVELDLLLQVWRASHE
Ga0173481_103453841	3300019356	Soil	KRGRAASSLAAMQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAETRILD
Ga0173481_105418022	3300019356	Soil	RIEVSDPQLVPSLLAFLTGHVHVNAEQVGPREVEISQLGSMNAEGRRLELDLMLQVWRASNTDASASILL
Ga0173482_106086671	3300019361	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAETRILD
Ga0190264_100119871	3300019377	Soil	SGNMRIEINDPELVPSLLAFLRERVHMNADRLGPVEVEVSQLGSMNAAARRLELDRLLEVWRASHEHARTSILD
Ga0190264_101512282	3300019377	Soil	MRIQLSDPTFVPSLLAFLGEHVHVTAEPVGPHEIEVSQLGSQHAAGRRLELDLLLQVWRASHGSVETRILD
Ga0190264_107094862	3300019377	Soil	MRHMRIHLSDQDLVPSLLAFLREHVHVTADPVGPQEIEVSQLGSLHAEGRRLELDLMLQVWRASHGPVETRILD
Ga0190264_110077911	3300019377	Soil	MRIEINDPELVPSLLAFLRERVHLNADRLGPVEVEVSQLGSMNRDARRVELDLLLQVW
Ga0190267_103195362	3300019767	Soil	MRIRVSDPQLVPSLLSFLTGHVHVNAEQVGPMEVEISQLGSMNARGRRLELDLMLGVWRASNTNASASIVREPS
Ga0222622_109202183	3300022756	Groundwater Sediment	PQVVPSLLAFLTGHVHVNAQQVGPTEVEISQLGSMNARGRRLELDLMLQVWRASNTHVSASILV
Ga0247786_10793192	3300022883	Soil	MRIEVSDPQLVPSLLAFLTGHVHVNAEQVGPREVEISQLGSMNAEGRRLELDLMLQVWRASNTDASASILL
Ga0247800_11318801	3300023263	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHAKTRILD
Ga0247789_11068171	3300023266	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQVGPNEIEVSLLGSMNTVKRRLELDLMLQLWRASNEHA
Ga0207682_103454522	3300025893	Miscanthus Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRA
Ga0207688_109379782	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRGRRLVTRASGALLAVMQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASNENAETRILD
Ga0207669_101590501	3300025937	Miscanthus Rhizosphere	VTRASGALLAAMQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHVETRILA
Ga0207669_106549512	3300025937	Miscanthus Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHVETRILA
Ga0207704_105529012	3300025938	Miscanthus Rhizosphere	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHVETRILA
Ga0207691_107256851	3300025940	Miscanthus Rhizosphere	RGRTLLTRASGVLLAAMQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHVETRILA
Ga0207494_1004532	3300026690	Soil	MRIHLTDRHLIPSLLAFMREHVHVTADRVGPQEIEVSQLGSQHAAGRRLELDLLLQTWRASHASVETRILD
Ga0268266_100803511	3300028379	Switchgrass Rhizosphere	MQIHVSDPDLVQSLLEFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAVTRILD
Ga0247828_104390592	3300028587	Soil	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHVETRILS
Ga0247818_101354202	3300028589	Soil	MQIHVSDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHAETQILD
Ga0247818_108235922	3300028589	Soil	MQIHISDHTLVPSLLDFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHAEVRILS
Ga0247822_116555471	3300028592	Soil	HTLVPSLLDFLRERVHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHVETRILS
Ga0247821_100842523	3300028596	Soil	MQIHISDHTLVPSLLDFLRERVHVIAEQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHAEVRILS
Ga0307323_101064572	3300028787	Soil	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPREVEISQLGSMNARGRRMELDLMLQVWRASNVHASASIIL
Ga0307299_103371542	3300028793	Soil	MRIQVSDPQLVPSLLSFLTGHVHVNAEQVGPREVEISQLGSMNARGRRLELDLMLEVWRASNTNASASIVREPS
Ga0307287_101380282	3300028796	Soil	MRIQVSDPQLVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRMELDLMLQVWRASNTHASASILV
Ga0307503_100681973	3300028802	Soil	MQIHISDHTLVPSLLAFLRERVHVIADQVGPNEVEVSLLGSMNGPKRWLELDLMLQLWRASHEHVETRILS
Ga0307503_107713722	3300028802	Soil	MRIQVSDPQVVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRLELDLMLQVWRASNIQASA
Ga0307289_101951302	3300028875	Soil	MRIQVSDPQLVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRMELDLMLQVWRASNVHASASIIL
Ga0299907_100613674	3300030006	Soil	MRIEINDPELVPSLLAFLRERVHLNADQVGPTEVEVSQLGSMNLEARRVELDLLLQVWRTSHESVRTAILD
Ga0247826_113942042	3300030336	Soil	MKIHVSDPTLVPSLLAFLQERVHVIADQVAPNEIEVSLLGSMNTAKRRLELDRMLQLWRAANEQAETRILD
Ga0307497_107662812	3300031226	Soil	MRIQVSDPQVVPSLLAFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRLELDLMLQVWRASNTHASASILV
Ga0299913_101017992	3300031229	Soil	MPFAAMRIHVDDPQLVPSLLSFLRGRVHVTAEQVGENEVEVSQLGSMNAAGRRIELDLLLQIWRASHENVRARIVE
Ga0299913_104753041	3300031229	Soil	SSLLAFLRGHVHVVAEQLGPRDVEVSLLGSRNRAARRLELDLMLQVWRASHEQVTVAIVD
Ga0299913_110159752	3300031229	Soil	MRIEINDPELVPSLLAFLRERVDLNVDRLGPFEIEVSQLGSMNAAARRAELDRLLEVWRASHEHARTSILD
Ga0299913_120924881	3300031229	Soil	MRIELNDPQLVPSLLAFLREHTHVTAGCVEPTEIEVSQLGSLHAAGRRLELDLLLQVWRR
Ga0307408_1016851321	3300031548	Rhizosphere	PSLLSFLREHVHVTAEQVAPAEVEVSQLGSQHAERRRLELDLMLQVWRASHESAETRILD
Ga0307408_1024050331	3300031548	Rhizosphere	MRIHLSDQDLVPSLLAFLREHVHVTADPVGPHEIEVSQLGSQHAEGRRLELDLMLQVWRASHASVETRILD
Ga0307410_105591533	3300031852	Rhizosphere	MRISVSEPELVPSLLSFLRERVHVTAEQVGVNEIEISQLGSMNAEARRLELDLLLQLWRASHEHARTAILD
Ga0307407_105843241	3300031903	Rhizosphere	MRIQISDPTLVPSLLSFLREHVHVTAEQVAPTEVEVSQLGSQHAEGRRLELDLMLQVWRASHESAETRILD
Ga0310900_119532412	3300031908	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAETRILD
Ga0307412_103527261	3300031911	Rhizosphere	MRVSVNDPRFVPSLLAFLGRRVHLTAEQVGPTDVEISQLGSMNADARRLELDVLLRHWRRLHVDARTAIVD
Ga0310901_102044772	3300031940	Soil	QMQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAETRILD
Ga0307409_1022918692	3300031995	Rhizosphere	MRIHTSDPQLVPSLLAFLRERAHVVAEQIGLHEIEVSQLGSMSASERRLELDLMLQVWRASHERVETLILD
Ga0307416_1001492612	3300032002	Rhizosphere	MRIQISDPTLVPSLLSFLREHVHVTAEQVAPTEVEVSQLGSQHAEGRRLELDLMLQVWRASHELAETRILD
Ga0310902_107153991	3300032012	Soil	MRIHVSDPDLVPSLLGFLRERVHVIADQLSPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENAETRILE
Ga0310906_105918071	3300032013	Soil	MQIHVSDPDLVPSLLGFLRERVHVIADQLGPNEIEVSLLGSMNTAKRRLELDLMLQLWRASNENA
Ga0247829_102354982	3300033550	Soil	MQIHISDHTLVPSLLDFLRERVHVIADQVGPNEVEVSLLGSMNGAKRRLELDLMLQLWRASHEHAEARILS
Ga0247830_108832682	3300033551	Soil	MQIHVSDHTLVPSLLAFLRERAHVIADQVGPNEVEVSLLGSMNGPKRRLELDLMLQLWRASHEHAETQILD
Ga0364940_0183668_230_445	3300034164	Sediment	MRISVNDPELVPSLLSFLRARVHVTAEQVGLMEVEISQLGSMNADARRLELDLLLQLWRASHEHARTAILD
Ga0372946_0317703_368_583	3300034384	Soil	MRIQVNDPRLVPSLLSFLTGHVHVNAEQVGPTEVEISQLGSMNARGRRLELDLMLQVWRASNTHASASIVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042201

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences