Metagenome Family F042197

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042197
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	65 residues
Representative Sequence	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESLRRSR
Number of Associated Samples	117
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.86 %
% of genes near scaffold ends (potentially truncated)	29.11 %
% of genes from short scaffolds (< 2000 bps)	84.81 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.911 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.823 % of family members)
Environment Ontology (ENVO)	Unclassified (24.051 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.70% β-sheet: 0.00% Coil/Unstructured: 41.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF03734	YkuD	47.47
PF12229	PG_binding_4	12.66
PF05496	RuvB_N	5.70
PF13468	Glyoxalase_3	3.80
PF13328	HD_4	1.90
PF02075	RuvC	1.27
PF07452	CHRD	1.27
PF01368	DHH	1.27
PF14520	HHH_5	0.63
PF00196	GerE	0.63
PF01636	APH	0.63
PF16242	Pyrid_ox_like	0.63
PF03640	Lipoprotein_15	0.63
PF00211	Guanylate_cyc	0.63
PF03704	BTAD	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	47.47
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	47.47
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	5.70
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	1.27
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.63
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.63
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.63
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.91 %
Unclassified	root	N/A	17.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.91 %
Unclassified	root	N/A	17.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.91 %
Unclassified	root	N/A	17.09 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.78 %
Unclassified	root	N/A	17.09 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.70 %
Unclassified	root	N/A	17.09 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	17.72 %
Unclassified	root	N/A	17.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.09 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.03 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.96 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	2.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.03 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	2.53 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.27 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.03 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	2.53 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.27 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.03 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	2.53 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.27 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_350106_len_2199_cov_16_234198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2249	Open in IMG/M
3300000956\|JGI10216J12902_118240556	Not Available	664	Open in IMG/M
3300001305\|C688J14111_10111666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	834	Open in IMG/M
3300001535\|A3PFW1_10425847	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300001537\|A2065W1_10367874	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1407	Open in IMG/M
3300002568\|C688J35102_119169263	All Organisms → cellular organisms → Bacteria → Terrabacteria group	648	Open in IMG/M
3300002568\|C688J35102_119474710	All Organisms → cellular organisms → Bacteria → Terrabacteria group	702	Open in IMG/M
3300002568\|C688J35102_119761678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	768	Open in IMG/M
3300002568\|C688J35102_120666732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1320	Open in IMG/M
3300004081\|Ga0063454_100274923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300004153\|Ga0063455_101685455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300004156\|Ga0062589_100190316	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300004479\|Ga0062595_100441358	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300004480\|Ga0062592_100290463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300005093\|Ga0062594_101409119	All Organisms → cellular organisms → Bacteria → Terrabacteria group	708	Open in IMG/M
3300005093\|Ga0062594_102375480	Not Available	579	Open in IMG/M
3300005093\|Ga0062594_103130766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300005167\|Ga0066672_10393178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	907	Open in IMG/M
3300005172\|Ga0066683_10109544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1680	Open in IMG/M
3300005176\|Ga0066679_10538363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	761	Open in IMG/M
3300005176\|Ga0066679_10972988	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300005181\|Ga0066678_10303065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300005186\|Ga0066676_10289458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1080	Open in IMG/M
3300005187\|Ga0066675_11226077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300005329\|Ga0070683_100988402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300005332\|Ga0066388_100071573	All Organisms → cellular organisms → Bacteria	3778	Open in IMG/M
3300005332\|Ga0066388_101178420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1307	Open in IMG/M
3300005435\|Ga0070714_101412513	Not Available	680	Open in IMG/M
3300005436\|Ga0070713_100729979	Not Available	947	Open in IMG/M
3300005436\|Ga0070713_102023928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005439\|Ga0070711_101639072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300005445\|Ga0070708_100671681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300005445\|Ga0070708_100696744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	956	Open in IMG/M
3300005445\|Ga0070708_101267966	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005468\|Ga0070707_101289290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300005468\|Ga0070707_101334703	Not Available	684	Open in IMG/M
3300005534\|Ga0070735_10017635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5223	Open in IMG/M
3300005536\|Ga0070697_101807547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300005552\|Ga0066701_10387465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300005553\|Ga0066695_10615590	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005559\|Ga0066700_10416209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947	Open in IMG/M
3300005587\|Ga0066654_10036740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2083	Open in IMG/M
3300005614\|Ga0068856_100551366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1174	Open in IMG/M
3300005713\|Ga0066905_102142083	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_100045921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5239	Open in IMG/M
3300005764\|Ga0066903_102090155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1090	Open in IMG/M
3300005764\|Ga0066903_102762762	All Organisms → cellular organisms → Bacteria → Terrabacteria group	952	Open in IMG/M
3300005764\|Ga0066903_103399017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300005764\|Ga0066903_107897365	Not Available	546	Open in IMG/M
3300006032\|Ga0066696_11122103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300006881\|Ga0068865_100647113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300009012\|Ga0066710_100606634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1661	Open in IMG/M
3300009012\|Ga0066710_101467153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300009012\|Ga0066710_101544216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1021	Open in IMG/M
3300009038\|Ga0099829_10326058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1262	Open in IMG/M
3300009088\|Ga0099830_10717416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300009101\|Ga0105247_10692600	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300009137\|Ga0066709_100297606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2189	Open in IMG/M
3300009137\|Ga0066709_101528030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300009148\|Ga0105243_11984019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300009174\|Ga0105241_11515406	Not Available	646	Open in IMG/M
3300009177\|Ga0105248_10475183	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1409	Open in IMG/M
3300009840\|Ga0126313_10083991	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300009840\|Ga0126313_11654118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300009840\|Ga0126313_11849703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300010039\|Ga0126309_10035378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2304	Open in IMG/M
3300010041\|Ga0126312_10018005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4717	Open in IMG/M
3300010043\|Ga0126380_11124050	All Organisms → cellular organisms → Bacteria → Terrabacteria group	671	Open in IMG/M
3300010046\|Ga0126384_12189398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300010321\|Ga0134067_10325492	Not Available	599	Open in IMG/M
3300010362\|Ga0126377_12545099	Not Available	587	Open in IMG/M
3300010364\|Ga0134066_10390070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300010366\|Ga0126379_11400333	All Organisms → cellular organisms → Bacteria → Terrabacteria group	805	Open in IMG/M
3300010401\|Ga0134121_11067282	Not Available	798	Open in IMG/M
3300010403\|Ga0134123_13175202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300011271\|Ga0137393_10586341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300012010\|Ga0120118_1130241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300012011\|Ga0120152_1008987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4411	Open in IMG/M
3300012204\|Ga0137374_10003415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18811	Open in IMG/M
3300012204\|Ga0137374_10014951	All Organisms → cellular organisms → Bacteria	8968	Open in IMG/M
3300012204\|Ga0137374_10030234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5936	Open in IMG/M
3300012204\|Ga0137374_10041164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4892	Open in IMG/M
3300012204\|Ga0137374_10060262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3817	Open in IMG/M
3300012206\|Ga0137380_10238187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1643	Open in IMG/M
3300012207\|Ga0137381_10373618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1243	Open in IMG/M
3300012207\|Ga0137381_11284401	All Organisms → cellular organisms → Bacteria → Terrabacteria group	625	Open in IMG/M
3300012209\|Ga0137379_11428462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300012210\|Ga0137378_10287963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1528	Open in IMG/M
3300012211\|Ga0137377_10889823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300012212\|Ga0150985_104558449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1137	Open in IMG/M
3300012212\|Ga0150985_105720267	Not Available	589	Open in IMG/M
3300012212\|Ga0150985_110344456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1222	Open in IMG/M
3300012212\|Ga0150985_110360038	All Organisms → cellular organisms → Bacteria → Terrabacteria group	571	Open in IMG/M
3300012212\|Ga0150985_115945685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1252	Open in IMG/M
3300012212\|Ga0150985_121362406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	917	Open in IMG/M
3300012212\|Ga0150985_122973993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300012350\|Ga0137372_10012254	All Organisms → cellular organisms → Bacteria	8189	Open in IMG/M
3300012350\|Ga0137372_10049003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3742	Open in IMG/M
3300012350\|Ga0137372_10181294	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300012355\|Ga0137369_10291163	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300012355\|Ga0137369_10581255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300012360\|Ga0137375_10104041	All Organisms → cellular organisms → Bacteria	2882	Open in IMG/M
3300012469\|Ga0150984_100546074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300012469\|Ga0150984_109412553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300012532\|Ga0137373_10020643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6595	Open in IMG/M
3300012532\|Ga0137373_10797625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300012912\|Ga0157306_10202754	All Organisms → cellular organisms → Bacteria → Terrabacteria group	668	Open in IMG/M
3300012913\|Ga0157298_10302149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012957\|Ga0164303_11216299	All Organisms → cellular organisms → Bacteria → Terrabacteria group	552	Open in IMG/M
3300012972\|Ga0134077_10369870	Not Available	614	Open in IMG/M
3300012977\|Ga0134087_10039265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1825	Open in IMG/M
3300012984\|Ga0164309_10327258	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1116	Open in IMG/M
3300012989\|Ga0164305_11199048	All Organisms → cellular organisms → Bacteria → Terrabacteria group	658	Open in IMG/M
3300013296\|Ga0157374_10834559	All Organisms → cellular organisms → Bacteria → Terrabacteria group	938	Open in IMG/M
3300013296\|Ga0157374_11714567	Not Available	653	Open in IMG/M
3300013501\|Ga0120154_1091551	Not Available	698	Open in IMG/M
3300014968\|Ga0157379_10442200	Not Available	1199	Open in IMG/M
3300015265\|Ga0182005_1154232	Not Available	670	Open in IMG/M
3300015356\|Ga0134073_10363386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300015371\|Ga0132258_11484854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300015372\|Ga0132256_101898971	Not Available	703	Open in IMG/M
3300015373\|Ga0132257_102210656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300015374\|Ga0132255_104170130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300018032\|Ga0187788_10183284	Not Available	804	Open in IMG/M
3300018071\|Ga0184618_10504779	Not Available	507	Open in IMG/M
3300018468\|Ga0066662_12026896	Not Available	603	Open in IMG/M
3300018468\|Ga0066662_12619232	Not Available	533	Open in IMG/M
3300021560\|Ga0126371_10542609	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300022756\|Ga0222622_10302330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300025910\|Ga0207684_11572363	All Organisms → cellular organisms → Bacteria → Terrabacteria group	533	Open in IMG/M
3300025915\|Ga0207693_10922736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300025922\|Ga0207646_10226230	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300025922\|Ga0207646_11525187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300025928\|Ga0207700_11087043	Not Available	715	Open in IMG/M
3300025929\|Ga0207664_10800035	All Organisms → cellular organisms → Bacteria → Terrabacteria group	848	Open in IMG/M
3300025929\|Ga0207664_11265327	Not Available	657	Open in IMG/M
3300025931\|Ga0207644_10876985	Not Available	752	Open in IMG/M
3300025932\|Ga0207690_11125967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300025934\|Ga0207686_10198033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1437	Open in IMG/M
3300027748\|Ga0209689_1395980	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
3300027821\|Ga0209811_10017232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2342	Open in IMG/M
3300027821\|Ga0209811_10156079	Not Available	848	Open in IMG/M
3300027846\|Ga0209180_10680853	All Organisms → cellular organisms → Bacteria → Terrabacteria group	561	Open in IMG/M
3300027862\|Ga0209701_10441843	All Organisms → cellular organisms → Bacteria → Terrabacteria group	717	Open in IMG/M
3300027882\|Ga0209590_10000309	All Organisms → cellular organisms → Bacteria	15140	Open in IMG/M
3300027986\|Ga0209168_10011644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5230	Open in IMG/M
3300028771\|Ga0307320_10151162	All Organisms → cellular organisms → Bacteria → Terrabacteria group	898	Open in IMG/M
3300028787\|Ga0307323_10310826	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300028811\|Ga0307292_10294290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	679	Open in IMG/M
3300028828\|Ga0307312_10683143	All Organisms → cellular organisms → Bacteria → Terrabacteria group	680	Open in IMG/M
3300028880\|Ga0307300_10186208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300028885\|Ga0307304_10445218	All Organisms → cellular organisms → Bacteria → Terrabacteria group	589	Open in IMG/M
3300031720\|Ga0307469_12325746	All Organisms → cellular organisms → Bacteria → Terrabacteria group	523	Open in IMG/M
3300031765\|Ga0318554_10181957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1196	Open in IMG/M
3300031805\|Ga0318497_10487900	All Organisms → cellular organisms → Bacteria → Terrabacteria group	690	Open in IMG/M
3300031939\|Ga0308174_11688533	Not Available	544	Open in IMG/M
3300031954\|Ga0306926_13001968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300031996\|Ga0308176_10110301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2438	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.54%
Host-Associated	Host-Associated	16.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.28%
Plants	Host-Associated → Plants	16.46%
Aquatic	Environmental → Aquatic	1.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.59%
Sediment	Environmental → Aquatic → Sediment	1.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.76%
Loam	Environmental → Terrestrial → Soil → Loam	20.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.06%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.43%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.16%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00244400	2088090008	Soil	MRRILVWSSGPICLGAALLVAWLFELSTEHVLVLAPVIVLGTAAVVGLVLLWSAAAWDSLRGHRRRP
JGI10216J12902_1182405562	3300000956	Soil	MRRALLWLAGPICVGAALFVAWALELSTEHVLVLAPAIVLGTAAVVGLILLWVRAAWENLRGRD*
C688J14111_101116662	3300001305	Soil	VRRLILWIAGPLCVLGALAVAWLFELSTEHVLVLAPVIVVGTGAVLGLALLWTRMAIDSFRRPR*
A3PFW1_104258474	3300001535	Permafrost	MRRALLWIAGPICVVTAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIRAAWDTLHGPNGPK*
A2065W1_103678741	3300001537	Permafrost	MRRILVWSSGPICLVAALLVAWFFELSTEHVLVLAPVIVLGTAAVVGLLLLWSAAAWDSLRGHRRRP*
C688J35102_1191692631	3300002568	Soil	GPLCVLAALAVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSR*
C688J35102_1194747102	3300002568	Soil	IIVTMRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESLRRSR*
C688J35102_1197616782	3300002568	Soil	MRRALLWLAGPLCVLAAFGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAARESVRRSR*
C688J35102_1206667322	3300002568	Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESVRRSR*
Ga0063454_1002749232	3300004081	Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVIGTAAVVGLVLLWVKAARESVRRSR*
Ga0063455_1016854551	3300004153	Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESLRRSR*
Ga0062589_1001903163	3300004156	Soil	ERIIACMRRALLWIAGPLCILSALGVAWLFELSTEHVLVLAPVIVVGTAAVAGLVLIWIRAAKDSLRRSR*
Ga0062595_1004413581	3300004479	Soil	MWTAGPVCILGALAVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWTRMAIGSFRRPK*
Ga0062592_1002904632	3300004480	Soil	VRRFIVWAAGPLCVLSALGTAWLFELSTERVLLLAPVIVLGTAAVFGLVLLWTRAAMDSLRRPK*
Ga0062594_1014091192	3300005093	Soil	MPGGYLGARVRFVRRFIVWAAGPLCVLSALGTAWLFELSTERVLLLAPVIVLGTAAVFGLVLLWTRAAMDSLRRPK*
Ga0062594_1023754802	3300005093	Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSRDGT*
Ga0062594_1031307661	3300005093	Soil	MRRALLWIAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWVKAARESVRRSGDGT*
Ga0066672_103931782	3300005167	Soil	VRRVLLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK*
Ga0066683_101095443	3300005172	Soil	MRRALLWLAGPLCVLAAFATAWLFELSTEHVLVLAPVIVVGTGAIVGLVLLWTKAALDSLRRPK*
Ga0066679_105383632	3300005176	Soil	VRRALLWIAGPACVLVAFATAWLFELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWESVRRAK*
Ga0066679_109729882	3300005176	Soil	LLWIAAPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK
Ga0066678_103030652	3300005181	Soil	PILRLRHLGERLPGRYAPSVRRALLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK*
Ga0066676_102894582	3300005186	Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESLRRSR*
Ga0066675_112260772	3300005187	Soil	VRRALLWIAGPACVLVAFATAWLFELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWESVRRPK*
Ga0070683_1009884021	3300005329	Corn Rhizosphere	PLCVLAAFGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESVRRSR*
Ga0066388_1000715731	3300005332	Tropical Forest Soil	MRRALLWIAGPLCVLTAFGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAARESLRRSR*
Ga0066388_1011784202	3300005332	Tropical Forest Soil	VRRALLWLAGPLCVLAAFATAWLFELSTEHVLVLAPVIVFATGAIVGLVLLCTKAALASLRRPK*
Ga0070714_1014125131	3300005435	Agricultural Soil	MRRAILWAAAPLCVLSAFLTAWLFELSTERVLLLAPVIVFGTGAIVGLILLWTRAAIE
Ga0070713_1007299793	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MWMAGPVCILGALAVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWARMAIGSFRRPK*
Ga0070713_1020239282	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPLCVLVAFGVAWFFELSTEHVLALAPVIVVGTGAALGLVLLWIKAARESLRRPK*
Ga0070711_1016390722	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSR*
Ga0070708_1006716812	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPLCVLTALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIRAAWDSLRRSK*
Ga0070708_1006967442	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRRTLLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWSSIRRAK*
Ga0070708_1012679661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWTAGPLCVGAAFLTAWIFELSAEHVLVLMPVIVVCTAAAVGLLVLWAKMFRESVLRRAPRGTLK*
Ga0070707_1012892902	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPICVATAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIRAAWDTLRPK*
Ga0070707_1013347031	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALVWIAGPLCVLAAFAVAWFFELSTAHVLALAPVIVVGTGAVVGLVLLWVRAARDSLRRSK*
Ga0070735_100176357	3300005534	Surface Soil	VRKALIWAAGPLCVGAAFFTAWLFELSTSSVLVLMPVIVVCTGAATGLVVLWVKMFRESVLKRR*
Ga0070697_1018075471	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPLCVLTAFGVAWLFELSTAHVLALAPVIVVGTAAVVGLVLLWTRAAWETLRRSK*
Ga0066701_103874652	3300005552	Soil	VRRALLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK*
Ga0066695_106155902	3300005553	Soil	VRKTLLLIAAPLCVGVAFLTAWIFELSTAHVLALAPVIVVVTGAVVGMLLLCTRMFVDSVLRRSK*
Ga0066700_104162091	3300005559	Soil	RYAPSVRRALLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK*
Ga0066654_100367402	3300005587	Soil	MRRALLWLAGPLCVLAALGVAWLFEHSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESLRRSR*
Ga0068856_1005513662	3300005614	Corn Rhizosphere	MRRALLWLAGPLCVLAAFGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESVRRSR*
Ga0066905_1021420832	3300005713	Tropical Forest Soil	MRRALLWLAAPLCVLAAFATAWLFELSTEHVLVLAPVIVVGTGAIVGLVLLWTKAALAS
Ga0066903_1000459213	3300005764	Tropical Forest Soil	VLVAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWIKAARESLRRPK*
Ga0066903_1020901552	3300005764	Tropical Forest Soil	MRRALLWIAGPLCVVAAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIKAARESLRRGAK*
Ga0066903_1027627622	3300005764	Tropical Forest Soil	VIRGQNSQHMRRALLWIAGPLCVLAAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESLRRQR*
Ga0066903_1033990171	3300005764	Tropical Forest Soil	MRRAILWAAAPLCVLSALLTAWLFELSTERVLLLAPVIVFGTGAIVGLVLIWTKAAIESVRRAS*
Ga0066903_1078973651	3300005764	Tropical Forest Soil	VIRGQNSQHMRRALLWIAGPLCVLAAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESLRRR*
Ga0066696_111221031	3300006032	Soil	AAPLCVGVAFLTAWIFELSTAHVLALAPVIVVVTGAVVGLLLLWTRMFVDSVLRRSK*
Ga0068865_1006471133	3300006881	Miscanthus Rhizosphere	MRRALLWIAGPLCVLAAFGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAARESLRRSR*
Ga0066710_1006066342	3300009012	Grasslands Soil	VRRALVLIAAPVCVLVALATAWLFELSTEHVLVLAPVIVLCTAAAVGLLLLWARMAWGSIRRVK
Ga0066710_1014671532	3300009012	Grasslands Soil	MRRILKWSAGPICLGAALLVAWFFELSTEHVLVLAPVIVLGAAAVVGLLVLWAAAARDSLRGVRRRP
Ga0066710_1015442162	3300009012	Grasslands Soil	MRRALLWIAGPACVLVAFATAWLFELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWESVRRPK
Ga0099829_103260582	3300009038	Vadose Zone Soil	VRRALLWIAGPACVLVALATAWLFELSTEHVLVLAPVIVLGTAAAVGLLLLWARMAWASIRRAK*
Ga0099830_107174161	3300009088	Vadose Zone Soil	MRRALLWIAGPACILVAFATAWLFELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWESVRRAK*
Ga0105247_106926002	3300009101	Switchgrass Rhizosphere	MWIAGPLCVLGALAVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWTRMAIGSFRRSK*
Ga0066709_1002976063	3300009137	Grasslands Soil	VCVLVALATAWLFELSTEHVLVLAPVIVLCTAAAVGLLLLWARMAWGSIRRVK*
Ga0066709_1015280302	3300009137	Grasslands Soil	ACVLVAFATEWLVELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWESVRRPK*
Ga0105243_119840192	3300009148	Miscanthus Rhizosphere	MFDRIITVMRRALLWIAGPLCVLAAFGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAARESLRRSR*
Ga0105241_115154061	3300009174	Corn Rhizosphere	MRRALLWLAGPLCVLAAFGVAWLFELSTEHVLALAPVIVLGTAAVFGLVLLWTRAAMDSLRRPK*
Ga0105248_104751833	3300009177	Switchgrass Rhizosphere	VSPLCVLGALAVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWTRMAIGSFRRSK*
Ga0126313_100839912	3300009840	Serpentine Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAVVVGLLLLWVKAARESVRRSR*
Ga0126313_116541181	3300009840	Serpentine Soil	MRRALLWLAGPLCVFVALGVAWLFELSTEHVLALAPVIVVGTAAVLGLVLLWVKAARESVRRSRDRV*
Ga0126313_118497032	3300009840	Serpentine Soil	DNSAVRRALLWLAGPLCVLAAFGVAWLFELSTEHVLVLAPVIVVGTAAVVGLVVLWVKAALDSLRRPR*
Ga0126309_100353783	3300010039	Serpentine Soil	VLAAFGVAWLFELSTEHVLVLAPVIVVGTAAVVGLVVLWVKAALDSLRRPR*
Ga0126312_100180053	3300010041	Serpentine Soil	LGSAATGNRIIVTMRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAVVVGLVLLWVKAARESVRRSR*
Ga0126380_111240502	3300010043	Tropical Forest Soil	MRRALLWIAGPLCVLVAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWIKAARDSLRPPK*
Ga0126384_121893982	3300010046	Tropical Forest Soil	IAGPLCVLVALGVAWLFELSTEHVLALAPVIVVGTAAALGLVLLWVKAARESLRRSK*
Ga0134067_103254922	3300010321	Grasslands Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLW
Ga0126377_125450992	3300010362	Tropical Forest Soil	MRRALLWIAGPLCVLTAFGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAA
Ga0134066_103900701	3300010364	Grasslands Soil	TSNSAQHSSGNRIIVTMRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSR*
Ga0126379_114003332	3300010366	Tropical Forest Soil	MRRALLWIAGPLCVLVAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWIKAARESLRRPK*
Ga0134121_110672822	3300010401	Terrestrial Soil	MRRALLWIAGPLCVLAAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWVKAARDSLRGSK*
Ga0134123_131752021	3300010403	Terrestrial Soil	SAMPGGYLGARVRFVRRFIVWAAGPLCVLSALGTAWLFELSTERVLLLAPVIVLGTAAVFGLVLLWTRAAMDSLRRPK*
Ga0137393_105863411	3300011271	Vadose Zone Soil	HVGERLPRRYAPSVRRALLWIAGPACVLVALATAWLFELSTEHVLVLAPVIVLGTAAAVGLLLLWARMAWASIRRAK*
Ga0120118_11302412	3300012010	Permafrost	MRRALLWIAGPICVATAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIRAAWDTLHGPNGPK*
Ga0120152_10089876	3300012011	Permafrost	MRRILVWSAGPICVGAAFIVAWFFELSTEHVLVLAPVIVLGAAAVVGLLVLWAAAARDSLRGVRRRP*
Ga0137374_1000341520	3300012204	Vadose Zone Soil	MRKTLVLIGAPLCVAMAFFTAWVFELSVEHILVLAPVIVIVTAGIVGLLLLWARMFWESVLRR*
Ga0137374_100149511	3300012204	Vadose Zone Soil	VRRALLWLAGPVCVASALFVAWALELSTEHVLVLAPVIVLGTAAVVGLVLLWVRAAWDNLRGRD*
Ga0137374_100302343	3300012204	Vadose Zone Soil	MRRALLWIAGPLCVLAAFGVAWLFELSTENVLVLAPVIVLGTAAVAGLVLLWIRAARDSLRGSK*
Ga0137374_100411648	3300012204	Vadose Zone Soil	MRRLLLWIAGPLCVLVAFGVAWLFELSAEHVLALAPVIVVGTAAVVGLVLLWARAAWESLRRKSAD*
Ga0137374_100602622	3300012204	Vadose Zone Soil	MRRALLWIAGPLCVLAAFGVAWLFELSTENVLVLAPVIVVGTAAVAGLVLLWIRAARDSLRGSK*
Ga0137380_102381871	3300012206	Vadose Zone Soil	MGEGYPAVRLWIVRRTLVLVAAPVCVLVALATAWLFELSTAHVLVLAPVIVLCTAAAVGLLLLWARMAWESIRRPKSR*
Ga0137381_103736183	3300012207	Vadose Zone Soil	MRRALLWIAGPLCVLVAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWARA
Ga0137381_112844012	3300012207	Vadose Zone Soil	SGMGEGYPAVRLWIVRRTLVLVAAPVCVLVALATAWLFELSTAHVLVLAPVIVLCTAAAVGLLLLWARMAWESIRRPKSR*
Ga0137379_114284622	3300012209	Vadose Zone Soil	MGEGYPAVRLWIVRRTLVLIAAPVCVLVAFATAWLFELSTAHVLVLAPVIVLCTAAAVGLLLLWARMAWESFRRFK*
Ga0137378_102879633	3300012210	Vadose Zone Soil	MRRILVWSAGPICVGAAFLVAWFFELSTEHVLVLAPVIVLGAAAVVGLLVLWAAAARDSLRGVRRRP*
Ga0137377_108898232	3300012211	Vadose Zone Soil	MRRILVWSAGPICLGAALLVAWLFELSTEHVLVLAPVIVLGAAAVVGLLVLWAAAARDSLRGVRRRP*
Ga0150985_1045584491	3300012212	Avena Fatua Rhizosphere	LWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESVRRSR*
Ga0150985_1057202671	3300012212	Avena Fatua Rhizosphere	VKRLLLWLAGPLCVLGALAVAWLFELSTEHVLVLAPVIVVGTGAVLGLALLWTRMA
Ga0150985_1103444562	3300012212	Avena Fatua Rhizosphere	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRTRDGPGGGGGQGRVR*
Ga0150985_1103600382	3300012212	Avena Fatua Rhizosphere	YAVFVRRLILWIAGPLCVLGALAVAWLFELSTEHVLVLAPVIVVGTGAVLGLALLWTRMAIDSFRRPR*
Ga0150985_1159456852	3300012212	Avena Fatua Rhizosphere	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWGKAARESLRRSR*
Ga0150985_1213624062	3300012212	Avena Fatua Rhizosphere	ALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVVLWVKAARESVRRSR*
Ga0150985_1229739932	3300012212	Avena Fatua Rhizosphere	GKRIIVTMRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESVRRSR*
Ga0137372_1001225411	3300012350	Vadose Zone Soil	MRRVLLWIAGPVCVLSALATAWLFELSTEHVLVLAPVIVLGTAAMVGLLLLWARMAWGSLRRSK*
Ga0137372_100490032	3300012350	Vadose Zone Soil	MRRALIWIAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWTRAAWDSLRRGPK*
Ga0137372_101812943	3300012350	Vadose Zone Soil	MQRALLWIAAPLCVLTALGVAWLFELSTEHVLALAPVIVVGTGAVVGLLLLWTRAAWDSLRRSK*
Ga0137369_102911632	3300012355	Vadose Zone Soil	MRRVLLWIATPLCVLVALGVAWLFELSTEHVLALAPVIVVGTAAVVALVLVWTRAAWDSLRRKSAD*
Ga0137369_105812552	3300012355	Vadose Zone Soil	VRRALLWIAAPLCILAALGVAWLFELSTEHVLALAPVIVVGTAAVVALALLWVRAAWESFRRKSAD*
Ga0137375_101040416	3300012360	Vadose Zone Soil	MRRALLWIAGPLCVLAAFSVAWLFELSTENVLVLAPVIVVGTAAVAGLVLLW
Ga0150984_1005460742	3300012469	Avena Fatua Rhizosphere	ALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVLGTAAVVGLVLLWVKAARESVRRSR*
Ga0150984_1094125532	3300012469	Avena Fatua Rhizosphere	NRIIVTMRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSR*
Ga0137373_100206435	3300012532	Vadose Zone Soil	MRRVLLWIAGPLCVLVAFGVAWLFELSAEHVLALAPVIVVGTAAVVGLVLLWARAAWESLRRKSAD*
Ga0137373_107976251	3300012532	Vadose Zone Soil	ERIIACMRRALLWIAGPLCVLAAFGVAWLFELSTENVLVLAPVIVLGTAAVAGLVLLWIRAARDSLRGSK*
Ga0157306_102027542	3300012912	Soil	MRRALLWIAGPLCVLSAFGVAWLFELSTEHVLALAPVIVLGTAAVAGLVLLWIRAARDSLGRSK*
Ga0157298_103021492	3300012913	Soil	VRRLIVWIAAPLCVLGALAVAWLFELSTEHVLVLAPVIVVGTGAVVGLALLWTRMAIDSFRRTK*
Ga0164303_112162991	3300012957	Soil	LCILAAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLALLWTRMAIGSFRRPK*
Ga0134077_103698702	3300012972	Grasslands Soil	MRRALLWLAGPLCVLAAFGVAWLFELSTEHVLARAPVIVVGTAAVTGLVLLWIRAARDSLRRSK*
Ga0134087_100392652	3300012977	Grasslands Soil	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVCLVLLWVKAARESLRRSR*
Ga0164309_103272582	3300012984	Soil	MRRALLWIAGPLCVLVAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESLRRGAK*
Ga0164305_111990481	3300012989	Soil	RRGLLWIAGPLCILAAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLALLWTRMAIGSFRRPK*
Ga0157374_108345592	3300013296	Miscanthus Rhizosphere	VRRGLLWIAGPLCILAAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWTRMAIGSFRRSK*
Ga0157374_117145671	3300013296	Miscanthus Rhizosphere	MWIAGPLCVLGALAVAWLFELSAEHGLSLAPVIVVGTGAVVGLALLWTRMAIGSFRRSK*
Ga0120154_10915512	3300013501	Permafrost	MRRILLWSSGPLCVGVALLTAWFFELSTEHVLVLAPVIVFGTAAVVGLLLLWSAAAWDSIRGNRRRP*
Ga0157379_104422004	3300014968	Switchgrass Rhizosphere	MWIAGPLCVLGALAVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWTRMAIGSFRRPK*
Ga0182005_11542322	3300015265	Rhizosphere	VRRALLWIAGPLCVLVAFGVAWVFELSTEHVLALAHVIVFGTAAVVGLVLLWVKAARASLSDVDGRPDDDV*
Ga0134073_103633861	3300015356	Grasslands Soil	APLCVGVAFLTAWIFELSTAHVLALAPVIVVVTGAVVGLLLLWTRMFVDSVLRRSK*
Ga0132258_114848543	3300015371	Arabidopsis Rhizosphere	MRRALIWIAGPLCVLTALGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAARESVRRSR*
Ga0132256_1018989712	3300015372	Arabidopsis Rhizosphere	MRRALLWLAGPLCVLAAFGVAWLFELSTEHVLALAPVIVLGRAVVVGLVLLWVKAARESVRRSR*
Ga0132257_1022106562	3300015373	Arabidopsis Rhizosphere	MWIAGPLCVLGALAVAWLFELSTEHVLALAPVIVIGTGAVVGLALLWTRMAIGSFRRPK*
Ga0132255_1041701302	3300015374	Arabidopsis Rhizosphere	MWVAGPVCVLGALAVAWLFELSTEHVLALAPVIVIGTGAVVGLALLWTRMAIGSFRRPK*
Ga0187788_101832842	3300018032	Tropical Peatland	MRRALLWLAGPLCVAAAFFTAWLFELSAAHVLVLMPVIVVCTGAATGLVVLWVKMFRESVLKRPRAR
Ga0184618_105047791	3300018071	Groundwater Sediment	MRRALLWIAGPLCVLTALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWTRAAWE
Ga0066662_120268961	3300018468	Grasslands Soil	VRRALLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK
Ga0066662_126192322	3300018468	Grasslands Soil	VRRALLWIAGPACVLVALATAWLFELSTEHVLVLAPVIVLGTAAVIGLVLLWTK
Ga0126371_105426093	3300021560	Tropical Forest Soil	MRRALLWIAGPLCVLVAFGVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWIKAARDSLRPPK
Ga0222622_103023302	3300022756	Groundwater Sediment	VRRLIVWIAAPLCILGALAVAWLFELSTEHVLVLAPVIVVGTGAVVGLALLWTRMAIDSFRRTK
Ga0207684_115723632	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPLCVLTALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIRAAWDSLRRSK
Ga0207693_109227362	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSR
Ga0207646_102262302	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPICVATAFGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWIRAAWDTLRPK
Ga0207646_115251872	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWTAGPLCVGAAFLTAWIFELSAEHVLVLMPVIVVCTAAAVGLLVLWAKMFRESVLRRAPRGTLK
Ga0207700_110870432	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRRALLWIAGPLCVLVAFGVAWFFELSTEHVLALAPVIVVGTGAALGLVLLWIKAARESLRRPK
Ga0207664_108000352	3300025929	Agricultural Soil	MRRALLWIAGPLCVLVAFGVAWLFELSTEHVLALAPVIVVGTGAALGLVLLWIKAARESLRRPK
Ga0207664_112653271	3300025929	Agricultural Soil	MRRAILWAAAPLCVLSAFLTAWLFELSTERVLLLAPVIVFGTGAIVGLILLWTRAAIESLRRPR
Ga0207644_108769851	3300025931	Switchgrass Rhizosphere	MRRALLWLAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRS
Ga0207690_111259672	3300025932	Corn Rhizosphere	MWTAGPVCILGALAVAWLFELSTEHVLALAPVIVVGTGAVVGLALLWTRMAIGSFRRPK
Ga0207686_101980333	3300025934	Miscanthus Rhizosphere	MRRALLWIAGPLCVLAAFGVAWLFELSTEHVLALAPVIVFGTAAVVGLVLLWVKAARESLRRSR
Ga0209689_13959801	3300027748	Soil	LPGRYAPSVRRALLWIAGPACVLVAFATAWLLELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWASIRRAK
Ga0209811_100172323	3300027821	Surface Soil	MRRILMWSAGPICVGMAFLVAWLFELSTEHVLVLAPVIVFGAAAIVGLVVLWAAAARDSLRGFRRRP
Ga0209811_101560792	3300027821	Surface Soil	MRRLLLWIAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLW
Ga0209180_106808532	3300027846	Vadose Zone Soil	VRRALLWIAGPACVLVALATAWLFELSTEHVLVLAPVIVLGTAAAVGLLLLWARMAWASIRRAK
Ga0209701_104418432	3300027862	Vadose Zone Soil	VSERLPRRYAPSMRRALLWIAAPACVLVAFATAWLFELSTEHVLVLAPVIVLGTAAVVGLLLLWARMAWESVRRAK
Ga0209590_100003095	3300027882	Vadose Zone Soil	VRRALLWIAGPACVLVAFATAWLFELSTEHVLVLAPVIVLGTAAVVGLFLLWARMAWESVRRSK
Ga0209168_100116447	3300027986	Surface Soil	VRKALIWAAGPLCVGAAFFTAWLFELSTSSVLVLMPVIVVCTGAATGLVVLWVKMFRESVLKRR
Ga0307320_101511622	3300028771	Soil	MRRALLWLAGPLCVLAALVVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSGDGA
Ga0307323_103108262	3300028787	Soil	LCVLGALAVAWLFELSTEHVLVLAPVIVVGTGAVVGLALLWTRMAIDSFRRTK
Ga0307292_102942902	3300028811	Soil	VRRLIVWIAAPLCVLGALAVAWLFELSTEHVLVLAPVIVVGTGAVVGLALLWTRMAIDSFRRTK
Ga0307312_106831432	3300028828	Soil	HGMRRALLWIAGPLCVLTALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWTRAAWESLRRSK
Ga0307300_101862082	3300028880	Soil	MRRALLWIAGPLCVLAALGVAWLFELSTEHVLALAPVIVVGTAAVVGLVLLWVKAARESVRRSGDGA
Ga0307304_104452182	3300028885	Soil	PVIRLRHGDRIITEMRRALLWIAGPLCVVTALLVAWLFELSTEHVLALAPVIVVGTGAVVGLVLLWVRAAWDSLRRSK
Ga0307469_123257462	3300031720	Hardwood Forest Soil	MRRALLWLAVPLCVLAAFGVAWLFELSTEHVLALAPVIVLGTGAVVGLVLLWTKAAIANVRERRDS
Ga0318554_101819572	3300031765	Soil	MRRALLWLAGPLCVLAAFVVAWIFELSTEHVLALAPVIVVGTGAVVGLVLLWIKAARDSLRKDHDGA
Ga0318497_104879002	3300031805	Soil	IIVSMRRALLWLAGPLCVLAAFVVAWIFELSTEHVLALAPVIVVGTGAVVGLVLLWIKAARDSLRKDHDGA
Ga0308174_116885332	3300031939	Soil	MRRALLWIAGPACVGTAFLVAWLFELSLDRVLLLAPVIVFGTAAVLGLILLWARALWENV
Ga0306926_130019681	3300031954	Soil	VRRLSLWLAAPLCVAFALIVAWFFELSTTRVLLLAPVIVFGTGAVAGLVLLWTKMAIGSFSRHP
Ga0308176_101103013	3300031996	Soil	MRRALLWIAGPACVGTAFLVAWLFELSLDRVLLLAPVIVFGTAAVLGLILLWARALWENVRGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042197

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences