Metagenome Family F042168

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F042168
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	75 residues
Representative Sequence	MRMKASEVGGWLRQIAGKRDHRQLVSDDDYLVLRPGPNFDWLMGNPAAGQPTPSAPEQDPAGGDRREAADHTERG
Number of Associated Samples	60
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.28 %
% of genes near scaffold ends (potentially truncated)	18.35 %
% of genes from short scaffolds (< 2000 bps)	96.20 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (59.494 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (44.304 % of family members)
Environment Ontology (ENVO)	Unclassified (56.329 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.025 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.50% β-sheet: 0.00% Coil/Unstructured: 83.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF07311	Dodecin	6.96
PF06577	EipA	5.06
PF03734	YkuD	3.16
PF14235	DUF4337	2.53
PF09304	Cortex-I_coil	1.90
PF01679	Pmp3	1.90
PF00581	Rhodanese	1.27
PF09955	DUF2189	1.27
PF07345	DUF1476	0.63
PF00571	CBS	0.63
PF13610	DDE_Tnp_IS240	0.63
PF00211	Guanylate_cyc	0.63
PF12728	HTH_17	0.63
PF03695	UPF0149	0.63
PF13701	DDE_Tnp_1_4	0.63
PF04226	Transgly_assoc	0.63
PF07883	Cupin_2	0.63
PF13586	DDE_Tnp_1_2	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	6.96
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	3.16
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	3.16
COG0401	Membrane potential modulator PMP3/YqaE, plasma membrane proteolipid 3 (PMP3)/Esi3/RCI2/UPF0057 family	Energy production and conversion [C]	1.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.63
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.63
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
All Organisms	root	All Organisms	40.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
cellular organisms	root	All Organisms → cellular organisms	40.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.68 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.35 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.27 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.59 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.90 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	1.27 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.27 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.27 %
Amorphaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3.16 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.53 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.90 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.27 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.27 %
Scytonemataceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae	1.27 %
Acuticoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.90 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.27 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	1.27 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.27 %
Methylobacterium nodulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	0.63 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.63 %
Acuticoccus sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	0.63 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.63 %
Microvirga pudoricolor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.90 %
Scytonema tolypothrichoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema tolypothrichoides	1.27 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.27 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.27 %
Methylobacterium nodulans ORS 2060	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans → Methylobacterium nodulans ORS 2060	0.63 %
Microvirga sp. BSC39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	0.63 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.63 %
Acuticoccus sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	0.63 %
Microvirga pudoricolor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.49 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.90 %
Scytonema tolypothrichoides VB-61278	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema tolypothrichoides → Scytonema tolypothrichoides VB-61278	1.27 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.27 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.27 %
Methylobacterium nodulans ORS 2060	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans → Methylobacterium nodulans ORS 2060	0.63 %
Microvirga sp. BSC39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	0.63 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.63 %
Acuticoccus sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	0.63 %
Microvirga pudoricolor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101530417	Not Available	867	Open in IMG/M
3300001305\|C688J14111_10035296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1497	Open in IMG/M
3300001305\|C688J14111_10267058	Not Available	539	Open in IMG/M
3300001686\|C688J18823_10042892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3122	Open in IMG/M
3300001686\|C688J18823_10150998	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300001686\|C688J18823_10188854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1396	Open in IMG/M
3300002568\|C688J35102_117743300	Not Available	503	Open in IMG/M
3300002568\|C688J35102_118213311	Not Available	539	Open in IMG/M
3300002568\|C688J35102_118387843	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300002568\|C688J35102_118947559	Not Available	617	Open in IMG/M
3300002568\|C688J35102_120183702	Not Available	916	Open in IMG/M
3300002568\|C688J35102_120726002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema tolypothrichoides → Scytonema tolypothrichoides VB-61278	1428	Open in IMG/M
3300002568\|C688J35102_120729655	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300002568\|C688J35102_120776133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1547	Open in IMG/M
3300004081\|Ga0063454_100355734	Not Available	953	Open in IMG/M
3300004081\|Ga0063454_101592949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	563	Open in IMG/M
3300004081\|Ga0063454_102058808	Not Available	506	Open in IMG/M
3300004153\|Ga0063455_100454548	Not Available	779	Open in IMG/M
3300004153\|Ga0063455_100536408	Not Available	741	Open in IMG/M
3300004153\|Ga0063455_101083944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema tolypothrichoides → Scytonema tolypothrichoides VB-61278	589	Open in IMG/M
3300004479\|Ga0062595_101001692	Not Available	718	Open in IMG/M
3300004479\|Ga0062595_102351656	Not Available	527	Open in IMG/M
3300005093\|Ga0062594_100372502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1136	Open in IMG/M
3300005335\|Ga0070666_10831872	Not Available	681	Open in IMG/M
3300005354\|Ga0070675_101874359	Not Available	553	Open in IMG/M
3300005456\|Ga0070678_100619515	Not Available	968	Open in IMG/M
3300005457\|Ga0070662_100770452	Not Available	817	Open in IMG/M
3300005466\|Ga0070685_10597268	Not Available	794	Open in IMG/M
3300005543\|Ga0070672_101914643	Not Available	534	Open in IMG/M
3300005544\|Ga0070686_100576438	Not Available	883	Open in IMG/M
3300005544\|Ga0070686_101102777	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005618\|Ga0068864_101073458	Not Available	800	Open in IMG/M
3300007790\|Ga0105679_10120445	Not Available	1146	Open in IMG/M
3300007790\|Ga0105679_10347048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	1056	Open in IMG/M
3300007790\|Ga0105679_10371992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1159	Open in IMG/M
3300007790\|Ga0105679_10807719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1119	Open in IMG/M
3300009098\|Ga0105245_10355826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300009098\|Ga0105245_12178202	Not Available	608	Open in IMG/M
3300009101\|Ga0105247_10866430	Not Available	695	Open in IMG/M
3300009148\|Ga0105243_10362109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1335	Open in IMG/M
3300009789\|Ga0126307_10092246	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300009789\|Ga0126307_10258924	All Organisms → cellular organisms → Bacteria → Proteobacteria	1399	Open in IMG/M
3300009789\|Ga0126307_10317813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1253	Open in IMG/M
3300009789\|Ga0126307_10553753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	928	Open in IMG/M
3300009789\|Ga0126307_10800170	Not Available	761	Open in IMG/M
3300009789\|Ga0126307_10936024	Not Available	700	Open in IMG/M
3300009789\|Ga0126307_11026030	Not Available	667	Open in IMG/M
3300009840\|Ga0126313_10167357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1671	Open in IMG/M
3300009840\|Ga0126313_10229698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1433	Open in IMG/M
3300009840\|Ga0126313_10408997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1077	Open in IMG/M
3300009840\|Ga0126313_10461756	Not Available	1013	Open in IMG/M
3300009840\|Ga0126313_10660919	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300009840\|Ga0126313_10685884	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300009840\|Ga0126313_11761520	Not Available	518	Open in IMG/M
3300010036\|Ga0126305_10219439	Not Available	1212	Open in IMG/M
3300010036\|Ga0126305_10276786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	1085	Open in IMG/M
3300010036\|Ga0126305_10502864	Not Available	808	Open in IMG/M
3300010036\|Ga0126305_10590004	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010036\|Ga0126305_10842092	Not Available	625	Open in IMG/M
3300010036\|Ga0126305_10888539	Not Available	608	Open in IMG/M
3300010036\|Ga0126305_11024199	Not Available	567	Open in IMG/M
3300010036\|Ga0126305_11297075	Not Available	502	Open in IMG/M
3300010037\|Ga0126304_10226534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1226	Open in IMG/M
3300010037\|Ga0126304_10628786	Not Available	724	Open in IMG/M
3300010037\|Ga0126304_10941807	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300010039\|Ga0126309_10051300	Not Available	1973	Open in IMG/M
3300010039\|Ga0126309_10078301	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300010039\|Ga0126309_10137721	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300010039\|Ga0126309_10167962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1192	Open in IMG/M
3300010039\|Ga0126309_10201927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	1101	Open in IMG/M
3300010039\|Ga0126309_10225398	All Organisms → cellular organisms → Bacteria → Proteobacteria	1050	Open in IMG/M
3300010039\|Ga0126309_10246382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1010	Open in IMG/M
3300010039\|Ga0126309_10319864	Not Available	903	Open in IMG/M
3300010039\|Ga0126309_10406561	Not Available	816	Open in IMG/M
3300010039\|Ga0126309_10606116	Not Available	690	Open in IMG/M
3300010039\|Ga0126309_11162771	Not Available	528	Open in IMG/M
3300010039\|Ga0126309_11211613	Not Available	519	Open in IMG/M
3300010040\|Ga0126308_10477660	Not Available	840	Open in IMG/M
3300010040\|Ga0126308_11109756	Not Available	557	Open in IMG/M
3300010041\|Ga0126312_10161596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1558	Open in IMG/M
3300010041\|Ga0126312_10236851	Not Available	1280	Open in IMG/M
3300010041\|Ga0126312_10366187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300010041\|Ga0126312_10372196	Not Available	1014	Open in IMG/M
3300010041\|Ga0126312_10669968	Not Available	748	Open in IMG/M
3300010041\|Ga0126312_11448456	Not Available	509	Open in IMG/M
3300010042\|Ga0126314_10996200	Not Available	622	Open in IMG/M
3300010044\|Ga0126310_10108765	Not Available	1695	Open in IMG/M
3300010044\|Ga0126310_10191600	Not Available	1337	Open in IMG/M
3300010044\|Ga0126310_10225145	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300010044\|Ga0126310_10320288	Not Available	1075	Open in IMG/M
3300010044\|Ga0126310_10383297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	996	Open in IMG/M
3300010044\|Ga0126310_10567977	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300010044\|Ga0126310_10754205	Not Available	743	Open in IMG/M
3300010044\|Ga0126310_10961149	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010044\|Ga0126310_10983060	Not Available	663	Open in IMG/M
3300010044\|Ga0126310_11807819	Not Available	510	Open in IMG/M
3300010045\|Ga0126311_10222682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1387	Open in IMG/M
3300010045\|Ga0126311_11829920	Not Available	515	Open in IMG/M
3300010166\|Ga0126306_10055150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2764	Open in IMG/M
3300010166\|Ga0126306_10127856	Not Available	1867	Open in IMG/M
3300010166\|Ga0126306_10171536	Not Available	1624	Open in IMG/M
3300010166\|Ga0126306_10526082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	937	Open in IMG/M
3300010166\|Ga0126306_10569085	Not Available	901	Open in IMG/M
3300010166\|Ga0126306_10590610	Not Available	884	Open in IMG/M
3300010166\|Ga0126306_10686668	Not Available	820	Open in IMG/M
3300010166\|Ga0126306_10721231	Not Available	801	Open in IMG/M
3300010166\|Ga0126306_10795180	Not Available	763	Open in IMG/M
3300010166\|Ga0126306_11016980	Not Available	676	Open in IMG/M
3300010166\|Ga0126306_11176946	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010166\|Ga0126306_11524282	Not Available	555	Open in IMG/M
3300010373\|Ga0134128_12808384	Not Available	537	Open in IMG/M
3300010399\|Ga0134127_11177956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	832	Open in IMG/M
3300012212\|Ga0150985_102156720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105	Open in IMG/M
3300012212\|Ga0150985_102303129	Not Available	575	Open in IMG/M
3300012212\|Ga0150985_103496796	Not Available	909	Open in IMG/M
3300012212\|Ga0150985_105655568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1446	Open in IMG/M
3300012212\|Ga0150985_106039887	Not Available	639	Open in IMG/M
3300012212\|Ga0150985_110191691	Not Available	952	Open in IMG/M
3300012212\|Ga0150985_112824626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	680	Open in IMG/M
3300012212\|Ga0150985_113647155	Not Available	620	Open in IMG/M
3300012469\|Ga0150984_102537229	Not Available	970	Open in IMG/M
3300012469\|Ga0150984_102653379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300012469\|Ga0150984_103224052	Not Available	799	Open in IMG/M
3300012469\|Ga0150984_105298381	Not Available	717	Open in IMG/M
3300012469\|Ga0150984_108999501	Not Available	917	Open in IMG/M
3300012469\|Ga0150984_110253586	Not Available	589	Open in IMG/M
3300012469\|Ga0150984_123095428	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012957\|Ga0164303_11244320	Not Available	547	Open in IMG/M
3300013306\|Ga0163162_10178228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2251	Open in IMG/M
3300013306\|Ga0163162_11232865	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300013308\|Ga0157375_10482751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1404	Open in IMG/M
3300013308\|Ga0157375_11290085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans → Methylobacterium nodulans ORS 2060	858	Open in IMG/M
3300013308\|Ga0157375_12651730	Not Available	599	Open in IMG/M
3300014487\|Ga0182000_10260637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300014488\|Ga0182001_10210085	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300015371\|Ga0132258_10538604	All Organisms → cellular organisms → Bacteria → Proteobacteria	2925	Open in IMG/M
3300015372\|Ga0132256_100717905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1115	Open in IMG/M
3300015373\|Ga0132257_103466867	Not Available	574	Open in IMG/M
3300015374\|Ga0132255_101491928	Not Available	1023	Open in IMG/M
3300017792\|Ga0163161_10867435	Not Available	763	Open in IMG/M
3300017792\|Ga0163161_11498461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300017792\|Ga0163161_11911377	Not Available	528	Open in IMG/M
3300018466\|Ga0190268_11646700	Not Available	568	Open in IMG/M
3300019767\|Ga0190267_11380733	Not Available	533	Open in IMG/M
3300021078\|Ga0210381_10394212	Not Available	511	Open in IMG/M
3300025901\|Ga0207688_10064982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2061	Open in IMG/M
3300025903\|Ga0207680_10678091	Not Available	738	Open in IMG/M
3300025927\|Ga0207687_11324769	Not Available	619	Open in IMG/M
3300025935\|Ga0207709_10585590	Not Available	882	Open in IMG/M
3300025960\|Ga0207651_11143655	Not Available	698	Open in IMG/M
3300026088\|Ga0207641_11622283	Not Available	649	Open in IMG/M
3300026095\|Ga0207676_11611072	Not Available	647	Open in IMG/M
3300026121\|Ga0207683_12165405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300028778\|Ga0307288_10100551	Not Available	1053	Open in IMG/M
3300028778\|Ga0307288_10230682	Not Available	721	Open in IMG/M
3300031731\|Ga0307405_12033310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	515	Open in IMG/M
3300031903\|Ga0307407_11290685	Not Available	573	Open in IMG/M
3300032002\|Ga0307416_102959924	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.62%
Host-Associated	Host-Associated	30.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.99%
Plants	Host-Associated → Plants	30.38%
Aquatic	Environmental → Aquatic	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.92%
Freshwater	Environmental → Aquatic → Freshwater	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.53%
Loam	Environmental → Terrestrial → Soil → Loam	13.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.70%
Sand	Environmental → Terrestrial → Soil → Sand	2.53%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.70%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.63%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	44.30%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	12.03%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.06%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.16%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015304172	3300000364	Soil	MRMKASEVGDWVRQIAGKRDHREVVSDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMSDDRREAEGS*
C688J14111_100352962	3300001305	Soil	MGMKASEVGNWLRQHVGKRDHRQLMPEDYVVLRPGPNFDWLMGNPAAGQPTPPAPEPDRAGDNRHEDDSRRQFSP*
C688J14111_102670582	3300001305	Soil	MEAAMDMKASEVGHWLRQMAGKRDHHEVLSDDYIVLRPSPNFNWMMGNLGADQPTLAAPEPEPDLARDDRRE
C688J18823_100428922	3300001686	Soil	MKANEVGDWLRQHAGKRDHRQVLQADYVVIRPGPNFDWLMGNLAAGQTTPSASEPDPDGNDSHEDNPRR*
C688J18823_101509982	3300001686	Soil	MRMKASEVGGWLRQIAGKRDHRQLVSDDDYLVLRPGPNFDWLMGNPAAGQPTPSAPEQDPAGGDRREAADHTERG*
C688J18823_101888541	3300001686	Soil	V*DFKASEVGDWLRQIAGKRDHREVLSDEDYLVLRPGPNFDWLMSNPAAGQPLPLAPERDPVSDDRIRSDAV
C688J35102_1177433001	3300002568	Soil	MRMKASEVSDWLRQLAGKRDHREVLSDDDYLVLRPGPNFDWLMGNPASGQPTPSTPEQDPAGEDRRAAEMGGDH*
C688J35102_1182133111	3300002568	Soil	MGMKASEVGNGLRRMAGKRDHREVLRDDYLALRPGPNFDWLMGNLAAGQPTPAASETDPAGNNRHEDDPGRQFSP*
C688J35102_1183878432	3300002568	Soil	MSIKASDVGEWLRQHAGKRDHREVMSDDAYLVLRPGPNFDWLMGNLAAGQPTRLAHEVDSAGEGR
C688J35102_1189475592	3300002568	Soil	MDMKASEVGHWLRQMAGKRDHHEVLSDDYIVLRPSPNFNWMMGNLGADQPTLAAPEPEPDLARDDRREDDSRPQ*
C688J35102_1201837022	3300002568	Soil	MGMKVSEVGDWLRRTAGKRDHREVLRDDYLVVRPGPNFDWLMGNLVSGQPTPSASEPDPASNDRHEDNPRR*
C688J35102_1207260021	3300002568	Soil	MRMKASEVGNWLRQIAGKRDHREVVSDDDYLVLRPGPNFDWLMGNPVPARTAPLRPERNQAGDDCREAGDHAKRPS*
C688J35102_1207296551	3300002568	Soil	MGMKASEVGVWLRQHAGKRDHREALRDDYRVLRPGPNFDWFMAGLLAAQPTPAASEPDPADNDRHEDNPRRQFSP*
C688J35102_1207761332	3300002568	Soil	MRMKASEVGGWLRQLAGKRDHREVLSDDDYLVLRPGPNFDWLMGNPAAGQPTPSAPEQNSAGEDRRKAGAGGGNH*
Ga0063454_1003557342	3300004081	Soil	VVSLVKAVLMTSAPKASEVSDWLRQHAGKRDHREALGGDYLVRPGPNFDWFMSGLAAGQPTPTTPEPDRAGDDRHEGDNRRQSSP*
Ga0063454_1015929492	3300004081	Soil	VSIKASEVADWLRQVGGKRNHRKLVPDDDYLVIRPGPNFDWLMGNSAAGQPTPSGPEQDLAGEDRREADNRAKRG*
Ga0063454_1020588081	3300004081	Soil	MRMKASEVGGWLRQLAGKRDHREVLSDDDYLVLRPGPNFDWLMGNHVAGQPTRSAPEPDPASDGQSREYL*
Ga0063455_1004545482	3300004153	Soil	MGMKASEVGNWLRRMAGKRDHREVLRDDYLALRPGPNFDWLMGNLAADQPTPAASETDPAGNNRHEDDPGRQFSP*
Ga0063455_1005364081	3300004153	Soil	MRMKASEVSDWLRQLAGKRDHREVLSDDDYLVLRPGPNFDWLMGNPASGQPTPSTPEQDPAGEDSPRS*
Ga0063455_1010839442	3300004153	Soil	VFYPEQAKASMRIKASEVGGWLRQIASKRDHCKVISDDDYLVLRPGPNFDWLMGNPVPARTAPLRPERNQAGDDCREAGDHAKRPS*
Ga0062595_1010016921	3300004479	Soil	MCLTASEVGDWIRQAAGNRDHRKLVPNDDYLALRPGPNFDWLMSNPAAGQATPSASEHDPAGEDRSEADDRAERG*
Ga0062595_1023516562	3300004479	Soil	MGMKASEVGDWLRQIAGKRDHREVLSSDYLVIRPGPNFDWLMGNLAANQRPPSAPEQPPASEDRGEAGTGGGH*
Ga0062594_1003725022	3300005093	Soil	MRMKASEVGDWVRQIAGKRDHREVVSDDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMSDDRREAEGS*
Ga0070666_108318722	3300005335	Switchgrass Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDRNRPQQFST*
Ga0070675_1018743591	3300005354	Miscanthus Rhizosphere	MGMKANEIGDWLRRQHAGKRDHHEALRDDYVVIRPGPNFDWFMQGLAAGQPTAAAPEQEPAGNDRHEDDPRREVSP*
Ga0070678_1006195151	3300005456	Miscanthus Rhizosphere	MRMKASEVGDWVRQIAGKRDHREVVSDDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMGDDRREAEGS*
Ga0070662_1007704521	3300005457	Corn Rhizosphere	MGMKASEVGDWLRQIAGKRDHREVLSSDYLVIRPGPNFDWLMGNLAANQRPPLAPEQPPASEDRGEAGTGGGH*
Ga0070685_105972681	3300005466	Switchgrass Rhizosphere	MGTKASETGDWLQQIAGKRDRREVSREDDFVVRPGPNFDWFMGSLATGQPAPAAPEGDPASQDRHEDDPRREVSR*
Ga0070672_1019146431	3300005543	Miscanthus Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDK
Ga0070686_1005764381	3300005544	Switchgrass Rhizosphere	MKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDRNRPQQFST*
Ga0070686_1011027772	3300005544	Switchgrass Rhizosphere	AMRMKASEVGDWVRQIAGKRDHREVVSDDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMSDDRREAEGS*
Ga0068864_1010734582	3300005618	Switchgrass Rhizosphere	MGVKASEVSDWLRQHAGKRDHREVLSDDVVVIRPGPNFDWLMGNPAPTQPLAPAPEPDPAGEDRSKTDDRGERGSSTRA*
Ga0105679_101204452	3300007790	Soil	MSMKASEIGAWLRQMAGKRDHREALRDDYRVLRPGPNFDWFMEGLAGQPTPAAPEPEPDPASDDSREEESRPQ*
Ga0105679_103470483	3300007790	Soil	MKANEVGEWLRRKHVGKRDHRELMSEDVVVLRPGQNFDWFMGNLATGQPTPSASEPDPAGNDRHEDNPRRQFSP*
Ga0105679_103719924	3300007790	Soil	MGMKASKVADWLRQRAGKRDHRQVLSDDDYLVVRPGPNFDRLMGNLAADQPTLSAPGPNPAGNGRHEEDPCR*
Ga0105679_108077193	3300007790	Soil	MIRTNVSEVGHWLRQIAGKRDHREVMPDGDYFVLRPGPNFDWLMGNLAAGQPTPSAPEPDRAGEGGSEADNRTK*
Ga0105245_103558264	3300009098	Miscanthus Rhizosphere	MGMKASEVGDWLRQIAGKRDHREVLSSDYLVIRPWPNFDWLMGNLAANQRPPLAPEQPPASEDRGEAGTGGGH*
Ga0105245_121782022	3300009098	Miscanthus Rhizosphere	MGMKASEVGNWLRPHAGKRDHREALRDDDLVLRPGPNFDWFMAGLPAAQPTPSAPEPNPASSGGHEDDPHRQFLP*
Ga0105247_108664301	3300009101	Switchgrass Rhizosphere	MGMKASKVADWLRQRAGKRDHRQVLSDDDLVLRPGPNFDRLMGNLAAGQPILSAPGPNPAGNDGHEDDPCRQFLS*
Ga0105243_103621092	3300009148	Miscanthus Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDGNRPQQFST*
Ga0126307_100922464	3300009789	Serpentine Soil	MGMKASEVGNWLRQVAGKRDHHEALRGDYVILRPGPNFDWFMDGLAAGQPKPAAPESDPASDKHEDDNRPQQISP*
Ga0126307_102589241	3300009789	Serpentine Soil	MGMKASKVADWLRQRAGKRDHRQVLSDDYLVLRPGPNFDRLMGNLAAGQPTLSAPGPNPAGNGRHEDDPCR*
Ga0126307_103178131	3300009789	Serpentine Soil	MSVKASEVGNWLRQIAGKRDHRNVLLDDDRFVLRPGPNFHWLMGNPAAGLPTPSAPEQDPVGED
Ga0126307_105537532	3300009789	Serpentine Soil	MRMKASEVGDWLRRVTGKRDHRQVMPDDDYLVLRPGPNFDWFMAGLAAGQPAPAAPEQGAAGEDRREADDRPQ*
Ga0126307_108001702	3300009789	Serpentine Soil	MGMKASEVGAWLRKSAGKRDHHELLPHDYLVVRPGPNFHWFMGNPAAGEPAPPASEQDRPSDDRREADGVG*
Ga0126307_109360241	3300009789	Serpentine Soil	MGMKANEVGDWLRKIAGKRDHREVLSGDYLVLRPGPNFDWLMGNLAADQLTPTAPEPDPADNDRHEDNPRQQL
Ga0126307_110260301	3300009789	Serpentine Soil	MHMTASEVGDWLRQIAGKRDHREVLLDDYLVVRPGPNFDWFMAGIAAAQPTPAAPEPTPAGDDKHEGSNRPQQFSPQHPRSRCRLSRLYAAR*
Ga0126313_101673573	3300009840	Serpentine Soil	MKANEVGQWLRRHAGKRDHREVLSDDDHLVLRPGPNFNWLMGNLAAGQPTRLAHEVDSAGEDRREADERAKRG*
Ga0126313_102296981	3300009840	Serpentine Soil	MRMNASEVGNWLRRRAGKRDHRQLVPDDQVVLRPGPNFDWLMGNLAADQPTPTEPDPADNDRHEDNPRRQFSP*
Ga0126313_104089972	3300009840	Serpentine Soil	MRMKVSEVGDWLRQIAGKRDHRKVVSDDDCLVLRPGPNFDWLMGNPAAGQPTSLAPEQNLVGEDYSEADDRTKRGFQPRQRNGTG*
Ga0126313_104617562	3300009840	Serpentine Soil	MAGKEEAMSIKASEVGEWLRKSASKRDHREHITDDYVVLRPGPNFDWFMAGLAAQTIPTAPEPDQADNDRHEDNP*
Ga0126313_106609192	3300009840	Serpentine Soil	VWRATESDWEASVSIKASEVADWLRQVGGKRNHRKLVPDDDYLVIRPGPNFDWLMGNSAAGQPTPSGPEQDLAGEDRREADNRTERG*
Ga0126313_106858842	3300009840	Serpentine Soil	MSMKANEVGNWLRQIAGKRDHRELMPEDYVVLRPGPNFHWLMGNLAAGQPTPAAPEQDPATQDRCETDDRAQRS*
Ga0126313_117615201	3300009840	Serpentine Soil	MGMKVSEVGDWLRQMAGKRDHREALRDDYLVVRPGPNFDWFMGSLTAGQPAPAAPEPDPASNDKHSDDARRQFSA*
Ga0126305_102194392	3300010036	Serpentine Soil	VSIKASEVADWLRQVGGKRNHRKLVPDDDYLVIRPGPNFDWLMGNSAAGQPTPSGPEQDLAGEDRREADNRTERG*
Ga0126305_102767862	3300010036	Serpentine Soil	MSMKAREIGDWLRQAVGKRNHREVLSEGDYFVLRPGPNFDWLMGNLAAGQPTPSEPGPNPTGNDGHEDDPRRRWCMDTPTH*
Ga0126305_105028642	3300010036	Serpentine Soil	MKASEVGDWLRQTAGKRDHREVMPDDDYLVLRPGPNFDLLNPVTTQAPASAPERDPAGDESRDRGHA*
Ga0126305_105900041	3300010036	Serpentine Soil	MKASEVGNWLRQIAGKRDHRELMPEDYVVLRPGPNFHWLMGNLAAGQPTPAAPEQDPATQDRCETDDRAQRS*
Ga0126305_108420922	3300010036	Serpentine Soil	MSVKASEVGNWLRQIAGKRDHRQALSDDYLVLRPGPNFDWLMGNLAADQPTPTEPDPADNDRHEDNPRRQSSP*
Ga0126305_108885391	3300010036	Serpentine Soil	MRMKVSEVSDWLRQIAGKRDHRKVVLDDDCLVLRPGPNFDWLMSNLAVGQPTPSVPEQDPAGEDRREADGRAKQGWFPRFDMAAQDSL*
Ga0126305_110241991	3300010036	Serpentine Soil	MKASEVGDWLRQRVGKRDHREHLTDDYVVLRPGSNFDWLMGHSAAGQPTPPAPEPDPVGEDRREAEAGGDH*
Ga0126305_112970751	3300010036	Serpentine Soil	MRMNASEVGNWLRRRAGKRDHRQLVPDDQVVLRPGPNFDWLMGNLAAGQSTPSALEPTPAGNDGHEDDPRQQFSP*
Ga0126304_102265343	3300010037	Serpentine Soil	MRMNASEVGNWLRRGAGKRDHRQLVPDDQVVLRPGPNFDWLMGNLAADQPTPTEPDPADNDRHEDNLRRQFSP*
Ga0126304_106287862	3300010037	Serpentine Soil	MAGREEAMSIKASEVGEWLRKSASKRDHREHITDDYVVLRPGSNFDWLMGHSAAGQPIPPAPEPDPVGEDRREAEAGGDH*
Ga0126304_109418072	3300010037	Serpentine Soil	MGMKANEVGNWLRQIAGKRDHHEVLSGDYLVLRPGPNFDLLMGNLAAGQSTLSASEPSPADSDRHEDNLRRQFSP*
Ga0126309_100513002	3300010039	Serpentine Soil	MSAHVKASMRMKASEVGDWLRQIAGKRDHREVLSDDYLVLRPGPNFDLLNPVATQAPASAPERDPAGDESRDRGHA*
Ga0126309_100783012	3300010039	Serpentine Soil	MSIKASEINDWLRQFAGKRDHRQVMPDHDYLVLRPGPNFDWLMGNPAAGQPTPSAPEPDRAGEDCVKLTTVPSETDP*
Ga0126309_101377212	3300010039	Serpentine Soil	MGMKASKVADWLRQRAGKRDHRQVLSDDYLVLRPGPNFDRLMGNLAAGQPTLSAPGPTPAGNGRHEDDPCR*
Ga0126309_101679622	3300010039	Serpentine Soil	MLMKANEVGNWLRHVAGKRDHREVLRDDYLVVRPGPNFDWFMAGLATGEPTAAAPEEGRSGDNHHEDNNRPQQFSP*
Ga0126309_102019272	3300010039	Serpentine Soil	MRMKASEVSEWLRQIAGKRDHREVLSGDDYLVLRPGPNFDWLMGNPAAGQPTPSAPEQDPAGEDCRKACDRTERG*
Ga0126309_102253981	3300010039	Serpentine Soil	MRMMASEVGDRLRQVAGKRDHRKVLSDDDYLMLRPGPNFDWLMGNPAAGQPTPSAPEQDPAGEDRREADTSRDPGPVRGSIKEERC*
Ga0126309_102463822	3300010039	Serpentine Soil	MRMKAIEVGDWLRQIAGKRDHRRLVPDDDYFVLRPGPNFDWLMGNSAAGQPAPAAPEQDSADDGHRETGTSRDLG*
Ga0126309_103198641	3300010039	Serpentine Soil	MAGTRDHREVLRDDYLALRPGPNFDWLMGNLAAGQPTPAASETDPAGNNRHEDDPGRQFSP*
Ga0126309_104065612	3300010039	Serpentine Soil	MAMGMKANEIGNWLRQQHAGKRDHRELMPEDYVVLRPGPKFDWLMGDLAAGQPTSAAPEPNSASDDKHEGNNRPQQFSP*
Ga0126309_106061161	3300010039	Serpentine Soil	MRMKASEVGGWLRQIAGKRDHREAMPDDDYFVLRPGPNFDWLMGNSAAGQPTPSVPEQNSPGEDRRKAGAGGGNH*
Ga0126309_111627711	3300010039	Serpentine Soil	VGDWLRQIPGKHDHREVLPDDDYFVLRPGPNFDWLMGNSAAGQPPPSAPERGPASDSREAGADGNSQ*
Ga0126309_112116131	3300010039	Serpentine Soil	MGMKASEVSAWLRKSAGKRDHHELMPEDYVVLRPGPNFDWLMGNLAADQLTRSASKEDPAGESGRKADDRTERG*
Ga0126308_104776602	3300010040	Serpentine Soil	MAGKEEAMPMKASEVGDWLRQIAGKRDHRKLMSDDDYLVLRPGPNFDWLMGNSAASRPRPSVPEPNLAGEDCATLTTVPSKADP*
Ga0126308_111097561	3300010040	Serpentine Soil	MRMNASEVGNWLRRGAGKRDHRQLVPDDQVVLRPGPTFDWLIGAHQPTPTAPEPDPADNDRHEDNLRRQFSP*
Ga0126312_101615961	3300010041	Serpentine Soil	MGMKASEVGNWLRQVAGKRDHHEALRGDYVVLRPGPNFDWFMDGLAAGQPKPAAPESDPASDKHEDDNRPQQISP*
Ga0126312_102368511	3300010041	Serpentine Soil	RQMAGKRDHREILRDDYLALRPGPNFDWLMGNLAAGQPTPAASETDPAGNNRHEDDPCRQFSP*
Ga0126312_103661872	3300010041	Serpentine Soil	MGMKASKVADWLRQRAGKRDHRQVLSDDYLVLRPGPNFDRLMGNLAAGQPTLSAPGPNPAGNGRHEDGPCR*
Ga0126312_103721962	3300010041	Serpentine Soil	MSMKASEVGSWLRQHAGKRDHRKILSDDYVVLRPGPNFHWLMSSLAAGQPAPPASEQDRASDDHREADGVG*
Ga0126312_106699682	3300010041	Serpentine Soil	MGMKASEVGDWLRQHAGKRDHREVLSSDYVVIQPGPNFDWLMGNLAAGQSTPPAFEPDPACNDRHEGNPRRQFSP*
Ga0126312_114484561	3300010041	Serpentine Soil	MRMNASEVGNWLRRRAGKRDHHELMPENDVVLRPGPNFDWLMGNLAAGQPTPSASEPDPASNDRHEDNPRR*
Ga0126314_109962001	3300010042	Serpentine Soil	MTTRLPVNTCLDSGKVSEVSNWLRQSAGKRDRREILSDDYVVLRPGLNFDWLMGTLAAGQPTPSASEPDPASNDRHEDNPRR*
Ga0126310_101087651	3300010044	Serpentine Soil	MSMKASEVGEWLRKCAGKRDHREVLSGDHLVLRPGPNFGWLMGNPAAGQSLPPAPEQNPAGQDRGEAGTDGGDH*
Ga0126310_101916003	3300010044	Serpentine Soil	MSIKASEVGDRLRQIAGKRDHRKVVPDDDYLVLRPGPNFDWLMGNVAAGQSPPLVPEPNLAGEDCVKLTTVPSKADP*
Ga0126310_102251451	3300010044	Serpentine Soil	MRIKASGVGDWLRQVTGKRDHRELMPEDYVVLRPGPNFDWLMGNLAADQLTRSASKEDPAGESGRKADGRTERG*
Ga0126310_103202882	3300010044	Serpentine Soil	MGMKASEVGNGLRRMAGKRDHREVLRDDYLALRPGPNFDWLMGNLAAGQPTPAASETDPAGNNRHEDDPCRQFSP*
Ga0126310_103832971	3300010044	Serpentine Soil	MRMKASEVGDWVRQIAGKRDHREVVSDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPM
Ga0126310_105679772	3300010044	Serpentine Soil	MGMKASEVGDWLRQVAGKRDHREGVSDDNRFVLRPGPNFDWLMGNLAAGQLPARAPERNPAGEDRSEAVDRAK*
Ga0126310_107542052	3300010044	Serpentine Soil	MKTSEVGGWLRQIAGKRDHRKVVPDDDDLVLRPGPNFHWLMGNPAAGLPTPSAPEQDPVGEDRREADAEGDH*
Ga0126310_109611492	3300010044	Serpentine Soil	MGMKASEVGGWLRQMAGKRDHREALRDDYRVLRPGPNFDWFMAGLAAQPTPTAPEPDPADNDRHEDNPRRQISP*
Ga0126310_109830602	3300010044	Serpentine Soil	MRIKASDVGSWLRQIAGKRDHRKLMSDDDYLVLRPGPNFDWLMGNSAASRPRPSVPEPNLAGEDCVTLTTVPSKA
Ga0126310_118078191	3300010044	Serpentine Soil	MRASEVGDWLRQVAGKRDHREVLSGDYLVLRPGPNFDWLMGNLGAGQPTPAAPEPEPDPASEDSREDESRPH*
Ga0126311_102226823	3300010045	Serpentine Soil	MKASEVGNWLRQIAGKRDHRELMPEDYVVLRPGPNFHWLMGNLAAGQPTPAAPEQGPATQDRCETDDRAQRS*
Ga0126311_118299201	3300010045	Serpentine Soil	MHMKASEVGDWLRQVAGKRDHREGVSDDNRFVLRPGPNFDWLMGNLAAGQLPAPAPERNPAGEDRSEAVNRAK*
Ga0126306_100551501	3300010166	Serpentine Soil	EVGDWLRQMAGKRDHREALRDDYLVVRPGPNFDWFMGSLTAGQPAPAAPEPDPASNDKHSDDARRQFSA*
Ga0126306_101278563	3300010166	Serpentine Soil	MGMKANEVGDWLRKIAGKRDHREVLSGDYLVLRPGPNFDWLMGNLAADQLTPTAPEPDPADNDRHEDNPRQQLSL*
Ga0126306_101715363	3300010166	Serpentine Soil	MSMKANEVGNWLRQIAGKRDHHEVLSGDYLVLRPGPNFDLLMGNLAAGQSTLSASEPSPAGSDRHEDNLRRQFSP*
Ga0126306_105260822	3300010166	Serpentine Soil	MSIKASGVSAWLRQVAGKRDHRQVLSDDYFVLRPGPNFDWLMGNLGAGQPTPAAPEPEPDPASEDSREDESRPQ*
Ga0126306_105690852	3300010166	Serpentine Soil	MGMKASDVGGWLRQMAGKRDHREILSGDHLVLRPGPNFDWLMDNLATGQHNPTAPGPNPA
Ga0126306_105906102	3300010166	Serpentine Soil	MGVRASEVGDWLRQIAGKRDYREVLSGDSFVLRPGPNFDWFMKGLAAGHPTPAPPEQDPAGNDRHEDDPRRQFSP*
Ga0126306_106866681	3300010166	Serpentine Soil	VSIKASEVADWLRQVGGKRNHRKLVPDDDYLVIRPGPNFDWLMGNSAAGQPTPSGPEQDLAGEDRREADNR
Ga0126306_107212311	3300010166	Serpentine Soil	MGMKASEIGDWLRQHAGKRDHREVLRDDYLVVRPGPNFDLFMGNLAATQPTPAPPEPSPADSDRHEDNLRRQFLP*
Ga0126306_107951801	3300010166	Serpentine Soil	MKASDVGNWLRQIAGKRDHRQALSDDDYLVLRPGPNFSWLIGNSAAGQPTPSAPEQDPVGEDRREADDRTERG*
Ga0126306_110169802	3300010166	Serpentine Soil	MSIKASEINDWLRQFAGKRDHRQVMLDHDYLVLRPGPNFDWLMGNPAAGQPTPSAPEPDRAGEDCVKLTTVPSETDP*
Ga0126306_111769462	3300010166	Serpentine Soil	MMGLGVGYNAAKEEAMSMKASEVGAWLRKSAGKRHHHELMPEDYVVVRPGPNFHWLMGNPAASRPRPSVPEPNLAGEDCVTLTTVPSKADP*
Ga0126306_115242822	3300010166	Serpentine Soil	MGMKASEVGDWLRQRVGRRDHHELMPEDYVVLRPGPNFHWLMGHPAAGQSTPSVPEQDLTGEDRSKTDDRGERGSSPCA*
Ga0134128_128083841	3300010373	Terrestrial Soil	MGMKASEVGNWLRLFACYGDHREALRDDYLVLRPGPNFDWFMQGLAAGEPTAAAPEQNPAGSDRHEADPRREVSP*
Ga0134127_111779562	3300010399	Terrestrial Soil	MGMKASEVGDWLRQRAGKRDHHKALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDRNRPQQFST*
Ga0150985_1021567202	3300012212	Avena Fatua Rhizosphere	MSMKASEVGVWLRQHAGKRDHREALRDDYRVLRPGPNFDWFMAGLAAQPTPTAPEPDPADNDRHEDNPRRQISP*
Ga0150985_1023031292	3300012212	Avena Fatua Rhizosphere	GMKANEIGDWLRRQHAGKRDHHEALRDDYVVIRPGPNFDWFIEGLAAGEPTAAAPEQGRSGDDPHEDNRPQQRSS*
Ga0150985_1034967961	3300012212	Avena Fatua Rhizosphere	MSMEASEVGDWLRQHAGKRDHRDVLRDDYVVLRPRSNFDWLMGNLAAGQPTPAASDTDRAEDRHEDDNRQQFSP*
Ga0150985_1056555684	3300012212	Avena Fatua Rhizosphere	MEASMRMKASEVGGWLRQIAGKRDHREAMPDDDYLVLRPGPNFDWLMGNPAASQTTPPTPEQDAAGEGGREVGNHAERG*
Ga0150985_1060398871	3300012212	Avena Fatua Rhizosphere	MGVKASEVGDWLRQRAGKRDHREVLSDDVVVIRPGPNFDWLMGNLAAGQSTPPAFEPDPACNDRHEGNPRRQFSP*
Ga0150985_1101916912	3300012212	Avena Fatua Rhizosphere	MEAAMDMKASEVGHWLRQMAGKRDHHEVLSDDYIVLRPSPNFNWMMGNLGADQPTLAAPEPEPDLARDDRREDDSRPQ*
Ga0150985_1128246262	3300012212	Avena Fatua Rhizosphere	MSMKASEVGAWLRQVSGRRDHREALRDDYHVLRPGPNFEWFMSGLAAGQSTPATPKPSPVGDDHREDANRTQQFLP*
Ga0150985_1136471551	3300012212	Avena Fatua Rhizosphere	MRMKANEVGDWLRRVAGKRDHRQAMPDDDYLVLRPGPNFDWLMGNPAAGQPTRLAHKPDPPGEDRSEAGRRAKRG*
Ga0150984_1025372292	3300012469	Avena Fatua Rhizosphere	MKASEVGNWLRQIAGKRDHHELMPEDYVVLRPGPNFHWLMGNLAAGQPTPAAPEQGPATQDRCETDDRAQRS*
Ga0150984_1026533792	3300012469	Avena Fatua Rhizosphere	MGMKASEVGNWLRQHVGKRDHRQLMPEDYVVLRPGPNFDWLMGNPAAGQPTPSAPEPDRAGDNRHEDDSRRQFSP*
Ga0150984_1032240522	3300012469	Avena Fatua Rhizosphere	MRMKASEVGDWLRHFADKRDHRKLVPDDDYLVLRPGPNFHWFIGSLAAGQPMPSMSEPDPSGNDRHGEGKADRAGGSN*
Ga0150984_1052983812	3300012469	Avena Fatua Rhizosphere	MRMKASEVGGWLRQLAGKRDHREVLSDDDYLVLRPGPNFDWLMGNPAAGQPTPSAPEQNSAGEDRRKVGAGGGNH*
Ga0150984_1089995011	3300012469	Avena Fatua Rhizosphere	MRMKASEVGDWVRQIAGKRDHREVVSDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPVCIPMSDDRREAEGS*
Ga0150984_1102535861	3300012469	Avena Fatua Rhizosphere	MGMKASEVGDGFRQRADKRDHREVLSDDVVVIRPGPNFDWLMGNLAAGQSTPPAFEPDPACNDRHEGNPRRQFSP*
Ga0150984_1230954281	3300012469	Avena Fatua Rhizosphere	DHREVMPDDDYLVLRPGPNFDWLMGNLATDQPTPTASEPDPADNDRHEDNPRRQFPP*
Ga0164303_112443202	3300012957	Soil	MGMKASEVGDWLRQRAGKRDHREALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKH
Ga0163162_101782282	3300013306	Switchgrass Rhizosphere	MGTKASETGDWLQQIAGKRDRREVSREDDFVVRPGPNFDWFMGSLATGQPAPAAPEGDPASHDRHEDDPRREVSR*
Ga0163162_112328652	3300013306	Switchgrass Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESPAAGQPTPAPEPNPVGDDKHEDRNRPQQFST*
Ga0157375_104827511	3300013308	Miscanthus Rhizosphere	MKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFRESLAAGQPTPAPEPTPVGDDKHEDRNRPQQFST*
Ga0157375_112900851	3300013308	Miscanthus Rhizosphere	MGMKANEIGDWLRRRRAGKRDHHEALRDDYVVIRPGPNFDWFMQGLAAGEPTAAAPEQGRPGDDHHEDNRPQQISP*
Ga0157375_126517302	3300013308	Miscanthus Rhizosphere	EVSDWLRQHAGKRDHREVMSSDYLVLRPGPNFDWLMGNPAPTQPLAPAPEPDPAGEDRSKTDDRGERGSSTRA*
Ga0182000_102606372	3300014487	Soil	MGMKASEVGDWLRQRVGRRDHHELMPEDYVVLRPGPNFHWLMGHPAAGQSTQSVPEQDLTGEDRSKTDDRGERGSSPCA*
Ga0182001_102100852	3300014488	Soil	MKASEVGDWLRKSAGKRDHREALRGDYVVLRPGPNFDWLMGNLAAGQSTPSAPEPTPAGNDGHEDDPRQQFSP*
Ga0132258_105386045	3300015371	Arabidopsis Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHKDSNCPQQFST*
Ga0132256_1007179052	3300015372	Arabidopsis Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDSNRPQQFST*
Ga0132257_1034668671	3300015373	Arabidopsis Rhizosphere	MGVKVSEVSDWLRQHAGKRDHREVMSSDYLVLRPGPNFDWLMGNPAPTQPLAPAPEPDPAGEDRSKTDDRGERGSSTRA*
Ga0132255_1014919282	3300015374	Arabidopsis Rhizosphere	MKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDSNRPQQFST*
Ga0163161_108674352	3300017792	Switchgrass Rhizosphere	MRMKASEVGDWVRQIAGKRDHREVVSDDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMGDDRREAEGS
Ga0163161_114984611	3300017792	Switchgrass Rhizosphere	MGMKASEIGNWLRQHVGKRDHRQLMPEDYVVLRPGPNFDWLMGNPAAGQPTPPAPEPDRAGDNR
Ga0163161_119113772	3300017792	Switchgrass Rhizosphere	MKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDRNRPQQFST
Ga0190268_116467001	3300018466	Soil	VSIKASEVGDWLRQRAGKRDHRELMPEDYVVLRPGPNFDWLMGNLAAGQSTRSAPEKDPIGEVRHEAETGSDH
Ga0190267_113807331	3300019767	Soil	MGMKASEVGAWLRKSASKRDHHELMPEDYVVVRPGPNFHWLMGNLAAGQPTPSASEQDPAGEDRSDADRLAKRG
Ga0210381_103942121	3300021078	Groundwater Sediment	MRMKASEVGDWVRQIAGKRDHREVVSDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPLSDDRREA
Ga0207688_100649822	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRMKASEVGDWVRQIAGKRDHREVVSDDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMSDDRREAEGS
Ga0207680_106780912	3300025903	Switchgrass Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDRNRPQQFST
Ga0207687_113247692	3300025927	Miscanthus Rhizosphere	MCLTASEVGDWIRQAAGNRDHRKLVPNDDYLALRPGPNFDWLMSNPAAGQATPSASEHDPAGEDRSEADDRAERG
Ga0207709_105855902	3300025935	Miscanthus Rhizosphere	MGMKASEVGDWLRQRAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDGNRPQQFST
Ga0207651_111436551	3300025960	Switchgrass Rhizosphere	MKASEVGDWVRQIAGKRDHREVVSDDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPECIPMSDDRREAEGS
Ga0207641_116222831	3300026088	Switchgrass Rhizosphere	TRSSGAAMGMKANEVGNWLRRQHAGKRDHHEALRDDYLVVRPGPNFDWFMESLAAGQPTPAPEPNPVGDDKHEDRNRPQQFST
Ga0207676_116110721	3300026095	Switchgrass Rhizosphere	RASETGDWLQQIAGKRDRREVSREDDFVVRPGPNFDWFMGSLATGQPAPAAPEGDPASHDRHEDDPRREVSR
Ga0207683_121654052	3300026121	Miscanthus Rhizosphere	MGMKMSEVGDWLRQRAGKRDHHEVLSDDVVMIRPGPNFDWFMQGLAAGEPTAAAPEQNPAGSDRHEADPRREVSP
Ga0307288_101005513	3300028778	Soil	MGMKASEVGYWLRQRVGKRDHRQLMPEDYVVLRPGPNFDWLMGNPAAGQPTPPAPEPDRAGDNRHEDDSRRQFSP
Ga0307288_102306822	3300028778	Soil	MRMKASEVGDWVRQIAGKRDHREVVSDDYLVLRPGPNFHWLMGMLDDTPAPAQSLPTAPVCIPMSDDRREAEGS
Ga0307405_120333101	3300031731	Rhizosphere	VSIKASEVADWLRQVGGKRNHRKLVPDDDYLVIRPGPNFDWLMGNSAAGQPTPLGPEQDLAGEDRREADNRTERG
Ga0307407_112906851	3300031903	Rhizosphere	MKASDVGGWLRQMAGKRDHREILSGDHLVLRPGPNFDWLMDNLATGQHNPTAPGPNPAGNDGHEDDPRR
Ga0307416_1029599241	3300032002	Rhizosphere	VSIKASEVADWLRQVGGKRNHRKLVPDDDYLVIRPGPNFDWLMGNSAAGQPIPSGPEQDLAGEDRREADNRTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042168

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences