Metagenome Family F041353

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041353
Family Type	Metagenome
Number of Sequences	160
Average Sequence Length	53 residues
Representative Sequence	MLAAQSSPVSGIVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRALIAGLLGFV
Number of Associated Samples	126
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.62 %
% of genes near scaffold ends (potentially truncated)	89.38 %
% of genes from short scaffolds (< 2000 bps)	85.00 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.875 % of family members)
Environment Ontology (ENVO)	Unclassified (41.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.19% β-sheet: 0.00% Coil/Unstructured: 51.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF01569	PAP2	8.81
PF13191	AAA_16	3.77
PF08450	SGL	2.52
PF01047	MarR	2.52
PF00248	Aldo_ket_red	1.89
PF03640	Lipoprotein_15	1.26
PF10127	RlaP	1.26
PF13460	NAD_binding_10	1.26
PF02310	B12-binding	1.26
PF00132	Hexapep	0.63
PF03109	ABC1	0.63
PF02899	Phage_int_SAM_1	0.63
PF01988	VIT1	0.63
PF02687	FtsX	0.63
PF17032	zinc_ribbon_15	0.63
PF13271	DUF4062	0.63
PF01128	IspD	0.63
PF02782	FGGY_C	0.63
PF03992	ABM	0.63
PF03606	DcuC	0.63
PF00011	HSP20	0.63
PF00027	cNMP_binding	0.63
PF01546	Peptidase_M20	0.63
PF01042	Ribonuc_L-PSP	0.63
PF05977	MFS_3	0.63
PF14016	DUF4232	0.63
PF00501	AMP-binding	0.63
PF03976	PPK2	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	2.52
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	2.52
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.26
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.63
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.63
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	0.63
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	0.63
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.63
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.63
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	0.63
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.63
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.63
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.63
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.12 %
Unclassified	root	N/A	36.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.12 %
Unclassified	root	N/A	36.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.12 %
Unclassified	root	N/A	36.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.00 %
Unclassified	root	N/A	36.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.75 %
Unclassified	root	N/A	36.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	5.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.25 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.25 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.88 %
Ornithinimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae	0.62 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.62 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.62 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.62 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	5.00 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.88 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.62 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.62 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	0.62 %
Ornithinimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium	0.62 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	0.62 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.88 %
Actinoplanes aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	5.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.88 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.62 %
unclassified Ornithinimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium	0.62 %
unclassified Phycicoccus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus	0.62 %
Saccharomonospora saliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	0.62 %
Nocardia miyunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia miyunensis	0.62 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.62 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.88 %
Actinoplanes aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	5.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.88 %
Ornithinimicrobium sp. F0845	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. F0845	0.62 %
Phycicoccus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp.	0.62 %
Streptomyces sp. W007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. W007	0.62 %
Saccharomonospora saliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	0.62 %
Nocardia miyunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia miyunensis	0.62 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.62 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10067363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300003368\|JGI26340J50214_10176824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	530	Open in IMG/M
3300004081\|Ga0063454_101381856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300004153\|Ga0063455_101262593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300004633\|Ga0066395_10753319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. W007	582	Open in IMG/M
3300005332\|Ga0066388_106901952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300005338\|Ga0068868_101035135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	752	Open in IMG/M
3300005355\|Ga0070671_101279337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	647	Open in IMG/M
3300005434\|Ga0070709_10009158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5450	Open in IMG/M
3300005434\|Ga0070709_11612780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	528	Open in IMG/M
3300005435\|Ga0070714_100790736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	918	Open in IMG/M
3300005435\|Ga0070714_101227298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	731	Open in IMG/M
3300005435\|Ga0070714_101774805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300005437\|Ga0070710_10521435	Not Available	816	Open in IMG/M
3300005437\|Ga0070710_11429795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	518	Open in IMG/M
3300005577\|Ga0068857_100757048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300005602\|Ga0070762_10366652	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005614\|Ga0068856_100927563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300005614\|Ga0068856_102508621	Not Available	522	Open in IMG/M
3300005713\|Ga0066905_101209376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300005764\|Ga0066903_101193350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1412	Open in IMG/M
3300005764\|Ga0066903_108434296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp.	526	Open in IMG/M
3300005764\|Ga0066903_108998065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300006031\|Ga0066651_10146049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1236	Open in IMG/M
3300006175\|Ga0070712_100174303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1671	Open in IMG/M
3300006175\|Ga0070712_101503146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300006804\|Ga0079221_10613062	Not Available	737	Open in IMG/M
3300006903\|Ga0075426_10490673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	912	Open in IMG/M
3300007076\|Ga0075435_101654881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	562	Open in IMG/M
3300009162\|Ga0075423_10374680	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1493	Open in IMG/M
3300009520\|Ga0116214_1407758	Not Available	531	Open in IMG/M
3300009672\|Ga0116215_1516968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	516	Open in IMG/M
3300009792\|Ga0126374_10023877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2741	Open in IMG/M
3300010043\|Ga0126380_12182152	Not Available	511	Open in IMG/M
3300010047\|Ga0126382_12141162	Not Available	536	Open in IMG/M
3300010358\|Ga0126370_11018099	All Organisms → cellular organisms → Bacteria → Terrabacteria group	757	Open in IMG/M
3300010360\|Ga0126372_10138218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1921	Open in IMG/M
3300010360\|Ga0126372_12617026	Not Available	556	Open in IMG/M
3300010371\|Ga0134125_11527204	Not Available	727	Open in IMG/M
3300010379\|Ga0136449_101869629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300010396\|Ga0134126_10892245	Not Available	1000	Open in IMG/M
3300010396\|Ga0134126_11030154	Not Available	921	Open in IMG/M
3300010398\|Ga0126383_12774057	Not Available	572	Open in IMG/M
3300012198\|Ga0137364_10943378	Not Available	653	Open in IMG/M
3300012209\|Ga0137379_10743426	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300012506\|Ga0157324_1021008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300013307\|Ga0157372_10041358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5096	Open in IMG/M
3300014968\|Ga0157379_12354005	Not Available	531	Open in IMG/M
3300014968\|Ga0157379_12354005	Not Available	531	Open in IMG/M
3300016319\|Ga0182033_10442634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300016319\|Ga0182033_11723986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	568	Open in IMG/M
3300016445\|Ga0182038_10404781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300017928\|Ga0187806_1032537	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300017966\|Ga0187776_11110223	Not Available	588	Open in IMG/M
3300017973\|Ga0187780_10075245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2320	Open in IMG/M
3300017973\|Ga0187780_10528610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300017974\|Ga0187777_10438661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	907	Open in IMG/M
3300017974\|Ga0187777_11183656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	558	Open in IMG/M
3300017974\|Ga0187777_11252955	Not Available	544	Open in IMG/M
3300018060\|Ga0187765_10618721	Not Available	701	Open in IMG/M
3300018085\|Ga0187772_10406275	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300018085\|Ga0187772_10546641	Not Available	820	Open in IMG/M
3300018085\|Ga0187772_10691388	Not Available	731	Open in IMG/M
3300021178\|Ga0210408_10243740	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300021404\|Ga0210389_10342196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1174	Open in IMG/M
3300021560\|Ga0126371_10281256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1786	Open in IMG/M
3300024181\|Ga0247693_1058759	Not Available	564	Open in IMG/M
3300025885\|Ga0207653_10012529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2648	Open in IMG/M
3300025916\|Ga0207663_11584249	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300025931\|Ga0207644_10708045	Not Available	840	Open in IMG/M
3300025931\|Ga0207644_10865757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300025934\|Ga0207686_10753722	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300025945\|Ga0207679_10704693	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300025981\|Ga0207640_11060910	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300026285\|Ga0209438_1142485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300026331\|Ga0209267_1280330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300027516\|Ga0207761_1029282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1088	Open in IMG/M
3300027765\|Ga0209073_10442267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300027787\|Ga0209074_10478005	Not Available	537	Open in IMG/M
3300027812\|Ga0209656_10029246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	3286	Open in IMG/M
3300027824\|Ga0209040_10108195	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300027826\|Ga0209060_10196937	Not Available	929	Open in IMG/M
3300030706\|Ga0310039_10198373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	792	Open in IMG/M
3300031231\|Ga0170824_125991988	All Organisms → cellular organisms → Bacteria → Terrabacteria group	668	Open in IMG/M
3300031543\|Ga0318516_10355664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300031545\|Ga0318541_10507491	All Organisms → cellular organisms → Bacteria → Terrabacteria group	675	Open in IMG/M
3300031564\|Ga0318573_10036259	Not Available	2340	Open in IMG/M
3300031572\|Ga0318515_10086052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300031572\|Ga0318515_10285135	All Organisms → cellular organisms → Bacteria → Terrabacteria group	886	Open in IMG/M
3300031572\|Ga0318515_10705603	Not Available	534	Open in IMG/M
3300031573\|Ga0310915_10474108	Not Available	889	Open in IMG/M
3300031640\|Ga0318555_10448451	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300031681\|Ga0318572_10784727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	567	Open in IMG/M
3300031682\|Ga0318560_10080147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1663	Open in IMG/M
3300031682\|Ga0318560_10383445	Not Available	760	Open in IMG/M
3300031719\|Ga0306917_11264934	Not Available	572	Open in IMG/M
3300031720\|Ga0307469_11960587	Not Available	568	Open in IMG/M
3300031736\|Ga0318501_10074862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1644	Open in IMG/M
3300031736\|Ga0318501_10102854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1427	Open in IMG/M
3300031764\|Ga0318535_10115515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1183	Open in IMG/M
3300031769\|Ga0318526_10021313	Not Available	2269	Open in IMG/M
3300031770\|Ga0318521_10251577	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1031	Open in IMG/M
3300031777\|Ga0318543_10147396	Not Available	1033	Open in IMG/M
3300031782\|Ga0318552_10040535	Not Available	2178	Open in IMG/M
3300031782\|Ga0318552_10205088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300031793\|Ga0318548_10309999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300031795\|Ga0318557_10383452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300031796\|Ga0318576_10614036	Not Available	512	Open in IMG/M
3300031799\|Ga0318565_10252480	All Organisms → cellular organisms → Bacteria → Terrabacteria group	857	Open in IMG/M
3300031799\|Ga0318565_10619768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. F0845	520	Open in IMG/M
3300031819\|Ga0318568_10390281	Not Available	867	Open in IMG/M
3300031833\|Ga0310917_10261291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300031835\|Ga0318517_10285522	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300031859\|Ga0318527_10201045	Not Available	843	Open in IMG/M
3300031890\|Ga0306925_11195208	All Organisms → cellular organisms → Bacteria → Terrabacteria group	762	Open in IMG/M
3300031893\|Ga0318536_10348344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300031894\|Ga0318522_10150759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300031942\|Ga0310916_10672193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	877	Open in IMG/M
3300031942\|Ga0310916_11029953	All Organisms → cellular organisms → Bacteria → Terrabacteria group	686	Open in IMG/M
3300031946\|Ga0310910_10788297	All Organisms → cellular organisms → Bacteria → Terrabacteria group	749	Open in IMG/M
3300031947\|Ga0310909_11261736	Not Available	595	Open in IMG/M
3300031981\|Ga0318531_10344476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300032008\|Ga0318562_10538465	All Organisms → cellular organisms → Bacteria → Terrabacteria group	676	Open in IMG/M
3300032009\|Ga0318563_10640246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	572	Open in IMG/M
3300032025\|Ga0318507_10215462	Not Available	830	Open in IMG/M
3300032043\|Ga0318556_10158996	Not Available	1168	Open in IMG/M
3300032043\|Ga0318556_10184014	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1084	Open in IMG/M
3300032043\|Ga0318556_10193335	Not Available	1057	Open in IMG/M
3300032054\|Ga0318570_10473323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	572	Open in IMG/M
3300032064\|Ga0318510_10303088	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300032067\|Ga0318524_10427450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300032068\|Ga0318553_10390208	All Organisms → cellular organisms → Bacteria → Terrabacteria group	729	Open in IMG/M
3300032089\|Ga0318525_10444934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	664	Open in IMG/M
3300032089\|Ga0318525_10608042	Not Available	557	Open in IMG/M
3300032090\|Ga0318518_10202105	Not Available	1017	Open in IMG/M
3300032090\|Ga0318518_10591915	Not Available	566	Open in IMG/M
3300032205\|Ga0307472_102545169	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300032515\|Ga0348332_14591111	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300032770\|Ga0335085_12327986	Not Available	535	Open in IMG/M
3300032782\|Ga0335082_11120758	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300032828\|Ga0335080_12117797	Not Available	542	Open in IMG/M
3300032829\|Ga0335070_10263205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia miyunensis	1685	Open in IMG/M
3300032829\|Ga0335070_10463372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1205	Open in IMG/M
3300033134\|Ga0335073_10371433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1685	Open in IMG/M
3300033290\|Ga0318519_10406667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	811	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	10.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.25%
Plants	Host-Associated → Plants	10.62%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.88%
Freshwater	Environmental → Aquatic → Freshwater	3.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.75%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.88%
Loam	Environmental → Terrestrial → Soil → Loam	13.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.62%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_100673632	3300003219	Bog Forest Soil	MMRLPPGKEAMLAAQSSPVSGIVFAVAVLATSMALVAGLAWASRRLLGCRSERCGH*
JGI26340J50214_101768242	3300003368	Bog Forest Soil	MLAAESSPVSGLVFAAAVLATSTALVAGLAWASRRLLGRPVGVLRALIAGRGDPAALR
Ga0063454_1013818561	3300004081	Soil	VNGIVFAVIVLATSIVLVAVLAWLSRRLLGLPVGVLRALIAGLVGFVAALIVGQALRA
Ga0063455_1012625931	3300004153	Soil	VIVLATSIVLVAVLAWLSRRLLGLPVGVLRALIAGLVGFVAALIVGQALRA
Ga0066395_107533191	3300004633	Tropical Forest Soil	MLAAQSSPLSTIAFAVVVLATSTAIVAGLAWAARRLLGSPVGTLRALIAGLLG
Ga0066388_1069019521	3300005332	Tropical Forest Soil	VLAAGSSPVSGLVFTVAVLATSVVLVAALAWASRRLLGLSVSVPRALIAGLLGFAAAV
Ga0068868_1010351353	3300005338	Miscanthus Rhizosphere	VIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAALIV
Ga0070671_1012793371	3300005355	Switchgrass Rhizosphere	VIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAA
Ga0070709_100091581	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAALIVGQALRATES
Ga0070709_116127801	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAAALIVGQALRATESG
Ga0070714_1007907361	3300005435	Agricultural Soil	VIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAALIVGQALRATESG
Ga0070714_1012272982	3300005435	Agricultural Soil	MLAAQSSPVSGFVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRAFIAGLLGFVA
Ga0070714_1017748052	3300005435	Agricultural Soil	VNGIVFAVIVLATSIVLVAALAWVSRRLLGLPVGALRALTAGLVGFAAALIVGQALRAAESG
Ga0070710_105214352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLAAQSSPVSGFVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRAFIA
Ga0070710_114297951	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLLAAQSSPVGGVVMTIAVLVISVALVAALAWAARRLLGLPVGTLRALAAGLLGFAAAELFGR
Ga0068857_1007570481	3300005577	Corn Rhizosphere	VNGIVFAVIVLATSIVLVAALAWVSRRLLGLPVGALRALTAGLVGFAAALIVGQ
Ga0070762_103666521	3300005602	Soil	MLAGPSSQLSGLAFAVIVLATSTVLVAGLAWVSRRLLGLPVGALRALIAGLL
Ga0068856_1009275632	3300005614	Corn Rhizosphere	VNGIVFAVIVLATSVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAAALIV
Ga0068856_1025086211	3300005614	Corn Rhizosphere	MLLAAQSSPVGGVVMTIAVLVISVALVAALAWAARRLLGLPVGTLRALAAGLLGFVAAELFGRWLL
Ga0066905_1012093761	3300005713	Tropical Forest Soil	MLAAQSSPVSGIVFLVAVLATSMAMVAVLAWASRQLLGVPVGALRALTAGLLGFAAA
Ga0066903_1011933502	3300005764	Tropical Forest Soil	MLAAQSSPVSTIAFAVVVLVTSTAIVAALAWAARRLLGLPVGALRALMAGLLGFLAAYL
Ga0066903_1084342963	3300005764	Tropical Forest Soil	MLGAQTSPVSGTVFVVAVLGTSMALVAGLAWASRRLLGLPVGALRALIAGLL
Ga0066903_1089980652	3300005764	Tropical Forest Soil	MLAAQSSPVTAIAFAVVVLATSTAIVAGLAWAARRLLGLPVGALRALIAGLL
Ga0066651_101460493	3300006031	Soil	MLAAQSSPVSGFVFVVAVLATSIVLVAALARVSRQLLGLPVGTLRAFIAGLLGFV
Ga0070712_1001743032	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNGIVFAVIVLATSIVLVAALAWVSRRLLGLPVGALRALTAGLVGFAAALI
Ga0070712_1015031462	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNGILFAVIVLAASLVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAALIVGQALRATE
Ga0079221_106130621	3300006804	Agricultural Soil	MLAAPSSQLSGVAFAVVVLATSTVLVAGLAWASRRLLGLPVGALRALTAGLLGFAAALLLGRS
Ga0075426_104906732	3300006903	Populus Rhizosphere	MLAAQSSPLSTIGFAVVVLVTSTAIVAGLAWAARRLLGLPVGALRALIAGLL
Ga0075435_1016548811	3300007076	Populus Rhizosphere	VNGIVFAVIVLATSIVLVAALAWLSRRLLGLPVGALRALIAGLVGFAAALIVG
Ga0075423_103746803	3300009162	Populus Rhizosphere	VLAAESSPVSGLVFTVAVLATSMALVAALAWASRRLLGLSVGVPRALI
Ga0116214_14077581	3300009520	Peatlands Soil	VNGIVFAVVVLVTSIVLVAVLAWVSRRLLGLPVGALRALLAGLVGFVAALI
Ga0116215_15169682	3300009672	Peatlands Soil	MLAAESSPVSGLVFVVAVLATSTALVAGLAWASRRLLGRPVGVLRALIAGLLG
Ga0126374_100238771	3300009792	Tropical Forest Soil	MRLSGKEAMLAAQSSTVSGVVFLVAVLATSMAMVAVLAWASRQLLGVPVGA
Ga0126380_121821522	3300010043	Tropical Forest Soil	MLAAQSSPVSGIVFLVAVLATSMAMVAVLAWASRQLLGVPVGALRALTAGLLGFAA
Ga0126382_121411622	3300010047	Tropical Forest Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGPLRMLMAGLLGFAAAELLGGALRAA
Ga0126370_110180992	3300010358	Tropical Forest Soil	MLAAQSSQVSGVVFVVAVLATSMVLVAALAWASRRLLGLPVAAPRALIAGLLGFGAAWLLGEWLR
Ga0126372_101382183	3300010360	Tropical Forest Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGPLRMLMAGLLGFAAAELLGGALRA
Ga0126372_126170262	3300010360	Tropical Forest Soil	MLAAQSSPVSGIVFVVAVLATSMAVVAVLAWASRQLLGVPVGALRALTAGLLGFA
Ga0134125_115272041	3300010371	Terrestrial Soil	MLAAQSSPVSGFVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRAFIAGLLG
Ga0136449_1018696293	3300010379	Peatlands Soil	MLAAQPGLVSGVVLTFTVLVTSIALVAGLAWASARLLGLPVGTVRAVIAGLLGF
Ga0136449_1039733041	3300010379	Peatlands Soil	MLAAQSSPVSGIVFAVAALAASMVLVMGLAWVSRRFLGLPVGVLRA
Ga0134126_108922451	3300010396	Terrestrial Soil	MLAAQSSPVSGFVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRAFIAGLLGFVAAYLLGRS
Ga0134126_110301541	3300010396	Terrestrial Soil	MLLAAQSSPVGGVVMTIAVLVISVALVAALAWAARRLLGLPVGTLRALAAGLLGFAAAELFG
Ga0126383_127740571	3300010398	Tropical Forest Soil	MWLPPGKEAMLAAQSSPVSGLAFAATVLVTSVALVAGLAWAARRLLGLPVGALRALTA
Ga0137364_104957681	3300012198	Vadose Zone Soil	MLAAQSSPVSGFVFVVAVLATSILLVAALAWASRQLLGLPVGTLRAF
Ga0137364_109433781	3300012198	Vadose Zone Soil	MLAAQSSPVTTIGFVLVALATSTIIVAILAWAARRMLGLPVGALRALIAG
Ga0137379_107434261	3300012209	Vadose Zone Soil	LTLVVLVTSVALVAGLAWASRRLPGLPVGALRALIAGLLGFAAA
Ga0157324_10210081	3300012506	Arabidopsis Rhizosphere	MLASPSSPVSGFVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRAFIAGLLGF
Ga0157372_100413587	3300013307	Corn Rhizosphere	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVA
Ga0157379_123540051	3300014968	Switchgrass Rhizosphere	VNGIVFAVIVLATSIVLVAALAWVSRRLLGLPVGTLRAVIAGLVGFAAA
Ga0157379_123540052	3300014968	Switchgrass Rhizosphere	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAA
Ga0182033_104426341	3300016319	Soil	MLAAQSSQVNGIVFVVAVLATSMVIVAFLAWASRRLLGLPIAAPRAVVAGLFGF
Ga0182033_117239861	3300016319	Soil	VLAAGSSPVSGLVFTVAVLATSVVLVAALAWASRRLLGLSVSVLRALI
Ga0182032_103566523	3300016357	Soil	MLAGASSQLSGLAFAAVVLATSAVLVAGLAWASRRLLGLPVGALR
Ga0182032_120099232	3300016357	Soil	MLAAQSSQVNGIVFVVAVLATSMVIVAFLAWASRRLLGLPIAAPRAVV
Ga0182039_109860711	3300016422	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRMLIAG
Ga0182038_104047811	3300016445	Soil	MLAAQSSPVSGIVFVVAVLATSMAVVAVLAWASRQLLGVPVGALRALTAGLL
Ga0187806_10325371	3300017928	Freshwater Sediment	MLAAQSSPVSGIVFVVAVLATSILVVAGLAWASRQLLGLPVGTLRAFIAGLVGF
Ga0187776_111102232	3300017966	Tropical Peatland	VFVVAVLATSIVLVAALAWASRRLLGLSVSAPRALIAGLLGFAAAVLL
Ga0187780_100752451	3300017973	Tropical Peatland	MLAAQSSPVSGIVFVVAVLATSIVLVAAVAWVSRQLLGLPVGTLRALIA
Ga0187780_105286101	3300017973	Tropical Peatland	MLAAQSSPVSGIVFVVAVLATSIVVVAVLAWASRQLLGLPVGPLRTLTAGLLGFAAAYFLGRAL
Ga0187777_104386613	3300017974	Tropical Peatland	VLAEGSPPVSGLVFTVAVLATSLAIVAALAWASRRLLGLSVGVLRALIAGLL
Ga0187777_111836561	3300017974	Tropical Peatland	MLAAESSPVSGLVFAVAVLATSMVLVAGLAWVSRRLLGLPVGALRALTAGLLGFAAAYFLGRAL
Ga0187777_112529551	3300017974	Tropical Peatland	MLAAQSSSVSGIVFVVAVLATSIVMVAGLAWVSRQLLGLPVGTLRALIA
Ga0187765_106187212	3300018060	Tropical Peatland	MLAAQSSPVSGIVFVVAVLATSIVVVAVLAWASRQLLGLPVGPLRTLTAGLLGFAAAYFL
Ga0187772_104062751	3300018085	Tropical Peatland	MLAAQAAPVSGVVLAFTVLVTSVALVTGLAWASRQLLGAPVGTLRALIA
Ga0187772_105466411	3300018085	Tropical Peatland	MLAAQSSSVSGIVFVVAVLATSIVLVAALAWISRQLLGLPIGTLRALVAGLLG
Ga0187772_106913881	3300018085	Tropical Peatland	VNGIVFAVAVLATSIVVVAALAWVSRRLLGLPVAALRALVAGLVGFVAALILGRALRA
Ga0210408_102437402	3300021178	Soil	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAAALIVGQALRAT
Ga0210389_103421961	3300021404	Soil	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVG
Ga0126371_102812561	3300021560	Tropical Forest Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRMLIAGL
Ga0247693_10587591	3300024181	Soil	MLAAQSSPVTTIGFVLVALATSTIIVAILAWAARRMLGLPVGALRALIAGLLGFLAAYLLGRSLHA
Ga0207653_100125291	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MVAAQSSPVSGFVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRALIAGLLGF
Ga0207663_115842491	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAAALIVGQALR
Ga0207664_116956972	3300025929	Agricultural Soil	VNGIVFAVIVLATSIVLVAALAWVSRRLLGLPVGALRAL
Ga0207644_107080452	3300025931	Switchgrass Rhizosphere	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAA
Ga0207644_108657571	3300025931	Switchgrass Rhizosphere	VNGIVFAVIVLATSIVLVAALAWLSRQLLGLPVGALRALTAGLVGFAAAL
Ga0207686_107537221	3300025934	Miscanthus Rhizosphere	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAAAL
Ga0207679_107046931	3300025945	Corn Rhizosphere	VNGIVFAVIVLATSIVLVAALAWVSRRLLGLPVGALRALTAGLVGFVAAL
Ga0207640_110609101	3300025981	Corn Rhizosphere	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGF
Ga0209438_11424851	3300026285	Grasslands Soil	VLAAGSSPVNGLVFTVAVLATSMALVAALAWASRRLLGLSVGVLRALIAGLLGFAVAAL
Ga0209267_12803301	3300026331	Soil	MLAAQSSPVSGFVFVVAVLATSILLVAALAWASRQLLGLPVGTLRAFIAALLGFVAAYLLGR
Ga0207761_10292823	3300027516	Tropical Forest Soil	VSGIVFAVAVLATSIALVAGLAWASRRLLGLPVGALRALIAGLLGFVAALLVGRALR
Ga0209073_104422671	3300027765	Agricultural Soil	VNGIVFAVIVLATSIVLVAALAWLSRQLLGLPVGALRALTAGLVGFAA
Ga0209074_104780051	3300027787	Agricultural Soil	VVLAAASSQLSGLAFAAVVLVTSAVLVAGLAWVSRRLLGLPVGALRALIAGL
Ga0209656_100292462	3300027812	Bog Forest Soil	MMRLPPGKEAMLAAQSSPVSGIVFAVAVLATSMALVAGLAWASRRLLGCRSERCGH
Ga0209040_101081951	3300027824	Bog Forest Soil	MLAAQSSPVSGIVFVIAVLATSILVVAGLAWASRQLLGLPVGTLRAFIAGL
Ga0209060_101969373	3300027826	Surface Soil	MLAAASSQLGGLAFAAVVLVTSAALVAGLAWASRRLLGLPVGALRALIAGV
Ga0310039_101983732	3300030706	Peatlands Soil	MLAAQSSSVSGIVFAVAVLATSIALVAGLAWASRRLLGLPVGALRALIAGLLGFVAALLL
Ga0170824_1259919882	3300031231	Forest Soil	VLAAGSSPVSGLVFTVAVLATSMVLVAALAWASRRLLGLSVGVLRAFIA
Ga0318516_103556641	3300031543	Soil	MLAAQSSPLSTIAFAMVVLATSTAIVAVLAWAARRLLGSPVGALRALIAGLLGFLAAYFLGRSLQA
Ga0318541_105074912	3300031545	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRLLIAGLLGFVTAELLGGALSAAQ
Ga0318573_100362591	3300031564	Soil	MLAEPSSPVSGLAFAVVVLITSAALVAALAWASRRLLGLPVGALRALIAGVLG
Ga0318515_100860523	3300031572	Soil	MLAAQSSPLSTIAFAVVVLVTSTAIVAGLAWAARRLVGLPVGALRALIAGLLGFVAAYLL
Ga0318515_102851352	3300031572	Soil	MLAAQSSQVNGIVFVVAVLATSMVIVAFLAWASRRLLGLPIAAPRAVVAGLFGFGAA
Ga0318515_107056031	3300031572	Soil	MLAAESSSVSGIVFVVAVLATSIVLVAAVAWASRQLLGLPVGTLRAFIA
Ga0310915_104741082	3300031573	Soil	MLAAQSSPVSGIVFAVAVLGTSMALVAGLAWASRRLLGLPVGELRALTAGLLGFAAGYLL
Ga0318555_104484511	3300031640	Soil	VNGIVFTIAALAASLALVAVLAWASRQLLGLPVGALRMLIAGLLGFVTAELLGGALRA
Ga0318572_107847271	3300031681	Soil	MLAAQSSQLNGLAAQSSQVNGIVFVVAVLATSMVIVAFLAWASRRLLGLPIAAPRAVVAGLFGFGAAWL
Ga0318560_100801473	3300031682	Soil	MLAAPSSQVNGIVFVVAVLAISMALVAALAWVARRLLGLPVGALRALIAGLLGF
Ga0318560_103834452	3300031682	Soil	MLAAQSSPVSGIVFVVAVLATSIVVVAALAWASRQLLGLPVGTLRALIAGLLGFVAAY
Ga0310813_106950531	3300031716	Soil	MLAAQSSPVSGFVFVVAVLATSIVLVAALAWVSRQLLGLPVGTLRS
Ga0306917_112649341	3300031719	Soil	MLAGASSQLSGIAFAAVVLVASAVLVAGLAWASRRLLGLPVGALRALIAGVLG
Ga0307469_119605872	3300031720	Hardwood Forest Soil	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFAAALIVGQALRA
Ga0318501_100748622	3300031736	Soil	MLAAQSSPVSGIVFAVAVLGTSMALVAGLAWASRRLLGLPVGELRALIAGLLGFGAGYLLGR
Ga0318501_101028541	3300031736	Soil	VLAAGSSPVSGLVFIVAVLATSMALVAALAWASRRLLGLSVGVLRALIAGLLGFGAAVLLGR
Ga0318535_101155155	3300031764	Soil	MLAAPSSQVNGIVFVVAVLAISMALVAALAWVARRLLGLPVGALRALIAGLLGFAVAWLLGSW
Ga0318554_102002061	3300031765	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRLLIA
Ga0318526_100213131	3300031769	Soil	MLAAQSSPVSGIVFAVAVLGTSMALVAGLAWASRRLLGLPVGELRALTAGLLG
Ga0318521_102515772	3300031770	Soil	MLAAPSSQVNGIVFVVAVLAISMALVAALAWVARRLLGLPVGALRA
Ga0318543_101473961	3300031777	Soil	MLAAQSSPVSGIVFVVAVLATSMAVVALLAWASRQLLGVPVGALRALTAGLLGFAAAYFL
Ga0318552_100405352	3300031782	Soil	VSGIVFAIAALAASIVLVAGLAWASRRLLGLPVGAVRALIAGLLGFVAALLVG
Ga0318552_102050883	3300031782	Soil	MLAAQSSQLNGLAAQSSQVNGIVFVVAVLATSMVIVAFLAWASRRLLGLPVAAPRALVAGLLGFG
Ga0318548_103099992	3300031793	Soil	VLAAESSPVSGLVFTVAVLATSMALVAALAWASRRLLGLSVGVLRALIAGLLGFATAAVL
Ga0318557_103834521	3300031795	Soil	MLAAESSPVSGIVFVVAVLATSILVVAGLAWASRQLLGLPVGTLRAFIAGLVGFVVA
Ga0318576_106140361	3300031796	Soil	MLAAQSSPVSGIVFAVAVLGTSMALVAGLAWASRRLLGLPVGELRALIAGLLGFGAGY
Ga0318565_102524801	3300031799	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRLLIAGL
Ga0318565_106197682	3300031799	Soil	MLAAESSPVSGIVFVVAVLATSILVVAGLAWASRQLLGLPVGTLRAFIAGLVGF
Ga0318568_103902812	3300031819	Soil	MLAEQSSPVSGIVLVVAVLATSIVLVAAVAWAARQLLGLPVGTLRTFIAGLLGFVAAYLLGRSL
Ga0318567_102068812	3300031821	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGA
Ga0310917_102612913	3300031833	Soil	VSGIVFAIAALAASIVLVAGLAWASRRLLGLPVGAVRALIAGLLGFVAALLVGRAL
Ga0318517_102855221	3300031835	Soil	VLAAGSSPVSGLVFIVAVLATSMALVAALAWASRRLLGLSVGVLRALIAGLLGFGAAVLLGRALRASQ
Ga0318527_102010451	3300031859	Soil	MLAAQSSSVSGIVFVVAVLATSIVIVAGLAWVSRQLLGLPVGTLRALTAGLLGFVAGYLL
Ga0306925_111952081	3300031890	Soil	VLAAGSPPVSGLVFTVAVLATSLALVAALAWASRRLLGLSVGVLRALIAGLLGFATAALL
Ga0318536_103483441	3300031893	Soil	MLAAGSSPVSGLVFAVAVLATSLALVAALAWTSRRLLGRPVGVLRALIAGLLGFASAYVLGRSLQAAQNVG
Ga0318522_101507593	3300031894	Soil	VLAAESSPVSGLVFTVAVLATSMALVAALAWASRRLLGLSVGVLRALIAGL
Ga0318551_103023451	3300031896	Soil	VNGIVFTVAALAASVALVAVLAWASRQLLGLPVGALR
Ga0310916_106721931	3300031942	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRLLIAGLLGF
Ga0310916_110299531	3300031942	Soil	VNGVVFTVAALAASVALVAVLAWASRQLLGLPVGAMRLLIAGLLGFAAAELLGRALR
Ga0310910_107882971	3300031946	Soil	VLAAGSPPVSGLVFTVAVLATSLALVAALAWTSRRLLGRPVGVLRALIAGLLGFAS
Ga0310909_112617362	3300031947	Soil	MLAAQSSPVSGIVFVVAVLATSMAVVAVLAWASRQLLGVPVGALRALT
Ga0318531_103444761	3300031981	Soil	MLAAESSPVSGIVFVVAVLATSILMVAGLAWASRQLLGLPVGTLRAFI
Ga0306922_102679853	3300032001	Soil	VNGIVFTIAALAASLALVAVLAWASRQLLGLPVGALRMLI
Ga0318562_105384651	3300032008	Soil	VNGVVFTVAALAASVALVAVLAWASRQLLGLPVGAMRLLIAGLLGFAAAELLG
Ga0318563_106402461	3300032009	Soil	VLAAGSPPVSGLVFTVAVLATSMALVAALAWASRRLLGLSVGVLRALIAGLLGFATAVLLGRALRAA
Ga0318563_107670721	3300032009	Soil	MLAAQSSPLNTIGFAVVVLVTSTAIVAGLAWAARRLLGLPVGALRALI
Ga0318507_102154621	3300032025	Soil	MLAAQSSPVSGIVFVVAVLATSIVVVAALAWASRQLLGLPVGTLRALIAGLLGFVAAYLLGRAL
Ga0318556_101589961	3300032043	Soil	MLAAQSSPVSGIVFVVAVLATSMAVVAVLAWASRQLLGVPVGALRALTAGLLGFAAAYFLGKALR
Ga0318556_101840142	3300032043	Soil	MLAAGSSPVSGLVFAVAVLATSLALVAALAWTSRRLLGRPVGVLRALIAGLLGFASAYV
Ga0318556_101933353	3300032043	Soil	MLAGASSQLSGLAFAAIVLVTSAVLVAGLAWASRRLLGLPVGALRALIAGLLG
Ga0318570_104733232	3300032054	Soil	MLAAGSSPVSGLVFAVAVLATSLALVAALAWTSRRLLGRPVGVLRALIAG
Ga0318510_103030881	3300032064	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRMLIAGLLGFVTAELLG
Ga0318524_104274502	3300032067	Soil	MLAAGSSPVSGLVFAVAVLATSLALVAALAWTSRRLLGRPVGVLRALIAGL
Ga0318553_103902081	3300032068	Soil	VLAAGSSPVSGLVFTVAVLATSVALVAALAWASQRLLGLSVGVLRALIASLLGFATA
Ga0306924_102272993	3300032076	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRMLI
Ga0318525_104449342	3300032089	Soil	MLAAQSSQLNGLAAQSSQVNGVVFVVAVLATSMVIVAFLAWASRRLLGLPVAAPRALAAGLLGFGA
Ga0318525_106080421	3300032089	Soil	VSEIAFAVVVLVTSMALVAGLAWVSRQLIGLPVAAPRALVAGLLGF
Ga0318518_102021051	3300032090	Soil	MLAEPSSPVSGLAFAVVVLITSAALVAALAWASRRLLGLPVGAQRPAKHL
Ga0318518_105919152	3300032090	Soil	MLAEQSSPVSGIVLVVAVLATSIVLVAALAWLSRRLLGLPVGALRALIAGLVG
Ga0318540_102425162	3300032094	Soil	VNGIVFTVAALAASLALVAVLAWASRQLLGLPVGALRLL
Ga0307472_1025451691	3300032205	Hardwood Forest Soil	VNGIVFAVIVLAASVVLVAVLAWVSRRLLGLPVGTLRAVIAGLVGFVAAL
Ga0348332_145911111	3300032515	Plant Litter	MLAAQSSPVSGIVFVVAVLATSIVLVAALAWASRQLLGLPVGTLRALIAGLLGFV
Ga0335085_123279861	3300032770	Soil	MLAAQPSPVSGIVFVVAVLATSMALVAGLAWVSRRLLGLPVGALRALTAGLL
Ga0335082_111207582	3300032782	Soil	VLAAGSSPVSGLVFTVAVLATSMALVAALAWASRRLLGLSVGAPRALIA
Ga0335080_121177971	3300032828	Soil	VSGIAFAAVVLVTSVVLVAAVAWVARRLVGLPVGTLRAVIAGLLGFAAAL
Ga0335070_102632052	3300032829	Soil	VNGIVFAVIVLATSIVLVAALAWLSRQLLGLPVGALRALIAGLVGF
Ga0335070_104633722	3300032829	Soil	VLAAGSPPVSGLVFAVAVLATSLVLVAGLAWTSRRLLGRPVGVLRALIAGLLGFAA
Ga0335073_103714331	3300033134	Soil	MLAAQSSAVNTIAFALVVLATSTTIVAGVAWAARRLLGLPVGAVRALIAGLLGFLAAYFVGRSLQAA
Ga0310914_111048362	3300033289	Soil	VNGVVFTVAALAASVALVAVLAWASRQLLGLPVGAMRLLI
Ga0318519_104066671	3300033290	Soil	VSGIVFAIAALAASIVLVAGLAWASRRLLGLPVGAVRALIAGLLGFVAALLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041353

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences