Metagenome / Metatranscriptome Family F041103

Overview

Basic Information

• Family ID: F041103
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 160
• Average Sequence Length: 44 residues
• Representative Sequence: MGLQIRDERQMKALTGLSQAQFDSLLPVFSDLYRATQQQTYE
• Number of Associated Samples: 119
• Number of Associated Scaffolds: 160

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 94.34 %
• % of genes near scaffold ends (potentially truncated): 83.75 %
• % of genes from short scaffolds (< 2000 bps): 88.12 %
• Associated GOLD sequencing projects: 112
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (64.375 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.875 % of family members)
• Environment Ontology (ENVO): Unclassified (26.250 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (46.875 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 44.29%
  β-sheet: 0.00%
  Coil/Unstructured: 55.71%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF13613	HTH_Tnp_4	2.50
PF13359	DDE_Tnp_4	2.50
PF13340	DUF4096	1.88
PF03400	DDE_Tnp_IS1	1.88
PF13592	HTH_33	1.25
PF13610	DDE_Tnp_IS240	1.25
PF13551	HTH_29	1.25
PF00296	Bac_luciferase	1.25
PF16889	Hepar_II_III_N	1.25
PF13751	DDE_Tnp_1_6	0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.25
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.62
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.62
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.62
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.62
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.62
COG3677	Transposase InsA	Mobilome: prophages, transposons [X]	0.62
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.62
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.62

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.62 %
Unclassified	root	N/A	34.38 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.62 %
Unclassified	root	N/A	34.38 %

Level 3

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.38 %
Unclassified	root	N/A	34.38 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.12 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	4.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.38 %
Unclassified	root	N/A	34.38 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.62 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.88 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.25 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	4.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.25 %
Unclassified	root	N/A	34.38 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.25 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	3.12 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.38 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.12 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.62 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.62 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.62 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	1.88 %
Unclassified	root	N/A	34.38 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.62 %

Level 7

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	3.12 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.62 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.25 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.62 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	1.88 %
Unclassified	root	N/A	34.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.62 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.62 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Beggiatoa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa	1.25 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.12 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.62 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.62 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Thioploca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca	0.62 %
Unclassified	root	N/A	34.38 %
unclassified Microgenomates group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.62 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.12 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.62 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Desulfobacula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Geotalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea	0.62 %
Luteolibacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter	0.62 %
Microgenomates group bacterium RBG_16_45_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium RBG_16_45_19	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Thioploca ingrica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca → Thioploca ingrica	0.62 %
Unclassified	root	N/A	34.38 %
unclassified Beggiatoa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa	1.25 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Beggiatoa sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp.	0.62 %
Beggiatoa sp. 'Orange Guaymas'	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp. 'Orange Guaymas'	0.62 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.12 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.62 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Desulfobacula toluolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Geotalea toluenoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea → Geotalea toluenoxydans	0.62 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	0.62 %
Luteolibacter marinus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter marinus	0.62 %
Microgenomates group bacterium RBG_16_45_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium RBG_16_45_19	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Thioploca ingrica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca → Thioploca ingrica	0.62 %
Unclassified	root	N/A	34.38 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000890|JGI11643J12802_12117340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	590
3300004281|Ga0066397_10014896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1071
3300005332|Ga0066388_100601426	All Organisms → cellular organisms → Bacteria	1722
3300005332|Ga0066388_100644445	All Organisms → cellular organisms → Bacteria	1675
3300005332|Ga0066388_101365244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp.	1228
3300005332|Ga0066388_101722455	Not Available	1110
3300005332|Ga0066388_104405362	Not Available	717
3300005332|Ga0066388_105102753	Not Available	667
3300005467|Ga0070706_101311989	Not Available	664
3300005586|Ga0066691_10954427	Not Available	504

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.62%
Environmental	Environmental	76.88%
Host-Associated	Host-Associated	22.50%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.62%
Plants	Host-Associated → Plants	22.50%
Terrestrial	Environmental → Terrestrial	71.25%
Wastewater	Engineered → Wastewater	0.62%

Category

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.62%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Marine	Environmental → Aquatic → Marine	0.62%
Phylloplane	Host-Associated → Plants → Phylloplane	0.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.12%
Sediment	Environmental → Aquatic → Sediment	3.75%
Soil	Environmental → Terrestrial → Soil	71.25%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.38%
Sand	Environmental → Terrestrial → Soil → Sand	8.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.62%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.62%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.75%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.12%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.62%

Habitat

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.25%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.25%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.12%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.88%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.62%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.88%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_121173402	3300000890	Soil	MGLQIRDDRQMKALTGLSQAQFHHLLPVFSDIYQATQQKTYEEGLTSGMRVRK
Ga0066397_100148961	3300004281	Tropical Forest Soil	MEEANRMGLQIRDERQMKALTGLSQDQFDHLLPCFSAIYEAT
Ga0066388_1006014261	3300005332	Tropical Forest Soil	MGIQVRDEHHMKAFTGLSQAQCDALVPVFSAIYEATQQQRSAEGVTSG
Ga0066388_1006444454	3300005332	Tropical Forest Soil	MGLQIRDERQMPALTGLSPAQFDSLLPVFRDLSQATPQRTYEEGVQSGTRRR
Ga0066388_1013652443	3300005332	Tropical Forest Soil	MGLLIRDDRQMKAVTGLSQAQFDHVLPVCTDLYQAAQQQT*
Ga0066388_1017224552	3300005332	Tropical Forest Soil	MGRLIRDDRQMKAFTGLSQAQCDPLLPVFSAMDQATQQHT*
Ga0066388_1044053622	3300005332	Tropical Forest Soil	VGRHIRDDRQMQALTGLSRAPWDSLLPVFRDLYQATQQPASAGG
Ga0066388_1051027532	3300005332	Tropical Forest Soil	MGLLIRDDRQRKALTGLSQAQFDHLLPVFNDLYQAIQHKTYEEGVESGTR
Ga0070706_1013119891	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFDQLLSVFRDLYQATQQNTYDAGVESGKVFQSC*
Ga0066691_109544271	3300005586	Soil	MGLQIRDNRQRKALTGLSQAQFDHLLPVFSDIYEATQQK
Ga0070702_1008789621	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFNHLLPIFSDLYQTTQQKTY
Ga0066905_1010961671	3300005713	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAQFDHLLPFFSAIYETTQQKTYAE
Ga0066903_1016831152	3300005764	Tropical Forest Soil	MGLQIQDARQMKAFIVLSQAQFDHLLAVFGDIYQAT*
Ga0066903_1025982292	3300005764	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQDQFDHLLPVFSAIYQAAQQQTYEKG
Ga0074479_106780182	3300005829	Sediment (Intertidal)	MGLQIRDDRQMKALTGLSQEQFDYLLPVFSEISWET
Ga0081455_102281472	3300005937	Tabebuia Heterophylla Rhizosphere	MGMHIRDDRQMKALTGLSQAQFDHLLPVFNDLYQAIQHKTSEEGVASGTRTRTQ*
Ga0075417_100364534	3300006049	Populus Rhizosphere	MGLHIRDERQRKALPGLSQAPCDSLLRVFSDLYRAAQQHA*
Ga0075417_106267521	3300006049	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDLYRATQQ
Ga0075432_105019741	3300006058	Populus Rhizosphere	MGLQIRDDRQMKALTGLSQDQFNHLLPVFSDIYQESIPLI*
Ga0066665_111302962	3300006796	Soil	MGLHIRDDRQRQALTGLSQTQCDSLLLAFRGMSLGSQQKTYAAGVESGTRR
Ga0066659_102233203	3300006797	Soil	MGLLIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGVASGTRR
Ga0075428_1001937025	3300006844	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVSQ
Ga0075428_1013076022	3300006844	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDIYRATQ
Ga0075430_1004853541	3300006846	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDLYRATQQQTYE
Ga0075430_1009868862	3300006846	Populus Rhizosphere	MGMQIRDERQMKALTGLSQTQFDHLLPVFSDIYQTTQQQTYEKGV*
Ga0075433_106056721	3300006852	Populus Rhizosphere	MGLLIRDDRQMKALTGLSQVQFDYLLPVFTDMYQAARQHT*
Ga0079215_108422872	3300006894	Agricultural Soil	MGLLMRDNRQMKALTGLSQDQFDFLLPVFSNIYRAAQQKTYEDGVRAGQRK
Ga0079216_111067121	3300006918	Agricultural Soil	MGLLIRDNRQMKALTGLSQDQFDDLLPVFSTIYRDAQQKIYEDGVKSGQRKRQPGG
Ga0075419_105789942	3300006969	Populus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFDQLLPVFSDLYQGNTAKNV*
Ga0066710_1008086463	3300009012	Grasslands Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDLYQA
Ga0099829_100533005	3300009038	Vadose Zone Soil	MGLQIRDDRQRKALTGLSQAQFDPLLSVFSAIYRATQQKTYEAGV
Ga0099829_114819801	3300009038	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDVYRTTQQQTYAEGVA
Ga0099829_116147712	3300009038	Vadose Zone Soil	MEIQIRDDRQMKALTGLSQAQFDSLLPVFSDIYQA
Ga0099829_116966611	3300009038	Vadose Zone Soil	MGMQIRDERQMKALTGLSQAQFDHLLPVFSDIYQTTQQQTYDKGV
Ga0099828_103470811	3300009089	Vadose Zone Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDIYQATQQHTYETGVASGTRRR
Ga0099827_100181898	3300009090	Vadose Zone Soil	MGLHIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGV
Ga0099827_101980591	3300009090	Vadose Zone Soil	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDSYRATQQQTYEEGVQSGTRR
Ga0099827_105811013	3300009090	Vadose Zone Soil	MGLQIRDDRQRKALTGLSQAQFDSLLSVFSDIYRATQQKTYEAGVASG
Ga0099827_119461792	3300009090	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDLYQATQHNTYEEGVASGTRRRKP
Ga0099827_119499282	3300009090	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGV
Ga0111539_105588193	3300009094	Populus Rhizosphere	MGMQIRDDRQMKALTGLSQAQFDHLLPVFNDLYQAIQHK
Ga0111539_130764942	3300009094	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDVYRAAQQQRYEEGSQS
Ga0075418_127091111	3300009100	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDIYRAAQQQRYEEGS*
Ga0114129_104207782	3300009147	Populus Rhizosphere	MGLQIRDDRQMKALTGLSQDQFHHLLPVFSDIYQA
Ga0114129_112079841	3300009147	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDSLLLAFRDMYQVSQQKTY
Ga0114129_125131552	3300009147	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDIYRATQQ
Ga0111538_137214322	3300009156	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVSQQKTYEEGVESGTRRR
Ga0075423_126240841	3300009162	Populus Rhizosphere	MGIQVRDERHMKALTGLSQAQFDDLLSAFSDIYGARQRRHYEEGVASGT
Ga0118657_103283211	3300009506	Mangrove Sediment	MAMKIRDERQMKALTGLSPKQFDRLLIEFEQAYQG
Ga0114944_12230012	3300009691	Thermal Springs	MGMHIRDDRQMKALTGLSQAQFEHLLPVFNDMYQAAHQKTYA
Ga0126374_116063412	3300009792	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAQFAHLLPVFSDLYQTT
Ga0105071_10224311	3300009808	Groundwater Sand	MGMQIRDERQMKALTGLSQAQCNHLLPVFSDIYQATQQKTYEKGIESGT
Ga0105084_10033332	3300009811	Groundwater Sand	MGLQIRDDRQMKALTGLSQAQFNHLLPVFRDIYRATQQKT
Ga0105070_11192012	3300009815	Groundwater Sand	MGLLIRDDRQMKALTGLSQDQFDHLLPVFSAIYQA
Ga0105072_10078393	3300009818	Groundwater Sand	MVLQIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQT
Ga0105072_11293042	3300009818	Groundwater Sand	MGLQIRDDRQMKALTGLSHAQFDSQLSVFSDIYRATQQQTSEEGVASGTRR
Ga0126305_101809391	3300010036	Serpentine Soil	PMGIQVRDERQMQAFTGLSQAQCDDLLPAFSDIYGATQRRH*
Ga0126380_102712822	3300010043	Tropical Forest Soil	MGLQMRDDRQMKALTGLSQAQFDHLLPVFRDIYRATQQQ
Ga0126310_107533722	3300010044	Serpentine Soil	MGIQVRDERQMQAFTGLSQAQFDDLLPAFSDIYGATQRRH*
Ga0126384_112798611	3300010046	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQVQFDHLLPVFSAIYQATQQQTYAQGVASGTRRRKPG
Ga0126384_115498482	3300010046	Tropical Forest Soil	MGMQIRDDRQMKALTGLSQAQFDHLLPVFNALYQAT
Ga0126382_102139761	3300010047	Tropical Forest Soil	MGLHIRDERQMKALTGLSQAQFDYLLPVFSDIYRATQQHTYEEGSQAGTR
Ga0126382_106567331	3300010047	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQVQFDSLLPVFTDIYQAARQHTYEK
Ga0134086_100539014	3300010323	Grasslands Soil	VGLQIRDERQMKALTGLSQDQVDHLLPCFSALYESTQHKT*
Ga0134065_101184531	3300010326	Grasslands Soil	PVGLQIRDERQMKALTGLSQDQVDHLLPCFSALYESTQHKT*
Ga0134080_100148974	3300010333	Grasslands Soil	MGLQIRDERQMKALTGLSQDQVDHLLPCFSALYESTQHKT*
Ga0116237_110384762	3300010356	Anaerobic Digestor Sludge	MVIKIRDERQMKALTGLSFAEFERLLPVFTAVYEAQQQRR
Ga0126372_121782751	3300010360	Tropical Forest Soil	MGLHIRDERQMKALTGLSQAQFDSLLPVFSDIYRATQQHTYEEGLQ
Ga0126377_108586393	3300010362	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAQFDSLLPVFRDIYRA
Ga0126377_124850872	3300010362	Tropical Forest Soil	MGMHIRDERQMKAFTDLSPAQCNRLLPVFSDIYQATQQQTYAKGIESGTRR
Ga0126379_103143403	3300010366	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAHFDSLLPVFSDIYRATQQQ
Ga0134124_121930741	3300010397	Terrestrial Soil	MGLQIRDNRQRKALTGLSQAQFDHLLPFFSDIYEATQQKTYE
Ga0124850_10661071	3300010863	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQDQFDHLLPVFSAIYQAAQQQTYEKGQ*
Ga0137392_103132151	3300011269	Vadose Zone Soil	MGMQIRDERQMKALTGLSQAQFDRLLPDFSDIYQTAQQQTYEKGVESGTRRR
Ga0137388_111453562	3300012189	Vadose Zone Soil	MEIQIRDDRQRKAFTGLSQAQCDSLLPVFSDISRATQHQKSEEGVK
Ga0137399_114201702	3300012203	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAPCDSLRSVFSDLSRATQQKTYEAGGA
Ga0137380_107764282	3300012206	Vadose Zone Soil	MGLRIRDDRQMKALTGLSQAQFDHLLPVFSDIYQATQQ
Ga0137387_107672191	3300012349	Vadose Zone Soil	MGLQIRDERQMKALTGLSQAQFAHLLPVFSDIYQTTQQQTYEKGVESGTRTRTP
Ga0137387_110148522	3300012349	Vadose Zone Soil	MGLHIRDDRQMHALTGLSQTQFDYLLLAFSDMYQVSQQKTYEEGVE
Ga0137367_106436762	3300012353	Vadose Zone Soil	MGLHIRDDRQREALTGLSQAQFDHLLPVFSDIYQATQQKTYEG*
Ga0137385_112237531	3300012359	Vadose Zone Soil	MGLQMRDDRQMKALTGLSQAPFDHLLPVFSDIYRKTQQQMYEEGVESGTRRRHP
Ga0137361_101393635	3300012362	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQDQFDHLLLVFSDIYRTTQQHTY
Ga0137361_102009563	3300012362	Vadose Zone Soil	MGLQIRDERQLKALTGLSQAHVDHLLPVFSEVYTEKQQQKY
Ga0137361_114264291	3300012362	Vadose Zone Soil	MGLQIRDERQMKALTGLSQDQFDHLLPFFSAIYETAVYE
Ga0137390_112765671	3300012363	Vadose Zone Soil	MGLQIRDERQLKALTGLSQAQVDHLLPVFSEVYTAQQQQKYEA
Ga0157341_10023041	3300012494	Arabidopsis Rhizosphere	MSSIRDERQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEG
Ga0157326_10885052	3300012513	Arabidopsis Rhizosphere	MGIQVRDERQMKALTGLSQAQFDDLLPVFSNIYGAMLQQHYEEGVASGT
Ga0137397_107209393	3300012685	Vadose Zone Soil	MGLQIRDDRQMTVLTGLSQAQFDHLLPVFSDIYRATQQHTYEEGVQAGTRRRH
Ga0137395_101690951	3300012917	Vadose Zone Soil	MGIQVRDERQMKAFTGLSQAQFDDLLPVFSDIYGVTQQQQFPEDDQTQ*
Ga0137394_100178291	3300012922	Vadose Zone Soil	MGWQVRDDRQMKALTGLSQAQFDSLLPVFSAIYHATQ
Ga0137394_103050282	3300012922	Vadose Zone Soil	MGLQIRDGRQMKALTGLSQDQLDHLVPFFSAIYETTRQKTYTEGV
Ga0137404_110285461	3300012929	Vadose Zone Soil	MGLQMRDDRQMKALTGLSQDQFDHLLPFFSALYETTQQKTYAAGVESGTRRRKP
Ga0126375_120896011	3300012948	Tropical Forest Soil	MGLQIRDDRQMKALTGLSQDQFDHLLPSFSALYKTTQQKTYAAGVASG
Ga0164302_113037411	3300012961	Soil	VGMQIRYDRQMKALTGLSQAQFDALLPVFRDVYQATQQKTSAVGAA
Ga0126369_111620961	3300012971	Tropical Forest Soil	MGLLIRDDHQMKALTGLSQVQFDYLLPVFTDIYQAARQHT
Ga0163162_101988674	3300013306	Switchgrass Rhizosphere	MGLHIRDERQTKALTGLSQTPFDSLLPVFSDLYRATQQYTYKEGLQSD
Ga0137418_103238191	3300015241	Vadose Zone Soil	MGLHIRDDRQMKAFTGLSQAQFAHLLPVFSDIDQTT*
Ga0132258_100577141	3300015371	Arabidopsis Rhizosphere	MGLQIRDERQRTALTGLSQAQFDSLLPVFSAIYRAT
Ga0132258_100862189	3300015371	Arabidopsis Rhizosphere	MGLQIRDERQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEE
Ga0132258_105803931	3300015371	Arabidopsis Rhizosphere	MGLQIRDDRQIKALTGLSQAQFDHLLSVFSNIYWATQQKTYEGDFSVS*
Ga0132258_106588111	3300015371	Arabidopsis Rhizosphere	MGMHIRDERQMKALTGLSQVQFNRLLPVFSDIYQATQQQTYA
Ga0132258_116400392	3300015371	Arabidopsis Rhizosphere	MGLQIRDKRQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEGLQSG
Ga0132257_1006359891	3300015373	Arabidopsis Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSAIYRATQQQTYEEGLQSGTRRR
Ga0132257_1028554742	3300015373	Arabidopsis Rhizosphere	MRDERQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEGLQ
Ga0132255_1006197041	3300015374	Arabidopsis Rhizosphere	MGLQIRDKRQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEG
Ga0182032_105819822	3300016357	Soil	MGRQIRDERQMKALTGLSQAQFDSLLPVFSDIYRAAQQHAYE
Ga0182040_115541821	3300016387	Soil	MGLLIRDDRQMKALTGLSQAQFDFLLPVFSALYQATQQHT
Ga0182037_114683922	3300016404	Soil	MGLLIRDDRQMKALTGLSQVQFDHLLPVFSDIYQATQQQTYAKGVE
Ga0184619_100736343	3300018061	Groundwater Sediment	MGLQIRDERQLKALTGLSQAHVDHLLPVFSEVYTEKKQQKYV
Ga0184637_103011421	3300018063	Groundwater Sediment	MGLQIRDERQLKALTGLSQTQVDHLLPVFSEVYMEKQQQKYAAGVAAGARTRKP
Ga0184637_105630422	3300018063	Groundwater Sediment	MEIQIRDDRQMKAFTGLSQAQFDSLLPVFSDIYQATQHKKYEA
Ga0184627_100087956	3300018079	Groundwater Sediment	MGVQIRDERQLKALTGLSQAQVDHLLPVFSEVYMENQALW
Ga0184627_101487341	3300018079	Groundwater Sediment	VGLQRRDDRQMKALTGLSQAPCDPLLPLFSDLSRATQQHRNEVGVASGTRRRHP
Ga0190275_129805442	3300018432	Soil	MGLQIRDERQLKALTGLSHAEFDHLLPVFSEVYTAQQHQ
Ga0190268_106650081	3300018466	Soil	EEAKKMGLQIRDERQMKALTGLSQDQFDHLLPFFSAIYEAAQQKT
Ga0066662_103592702	3300018468	Grasslands Soil	MGLQIRDDRQMQALTGLSQAQFDHLLSVFSDVYRAT
Ga0180117_11736271	3300019248	Groundwater Sediment	MGIQVRDECQMKALTGLSQAQFDRLLPVFSDIYQTTQQQTYAQGIESGTRVRT
Ga0137408_13169443	3300019789	Vadose Zone Soil	MGLQIRNERQLKALTGLSQGQFDHLLPVFSDIYLANQQHTYEEGLESGGPKTEAGWWF
Ga0179594_100126701	3300020170	Vadose Zone Soil	MGLHIRDDRQMKALTGLSHAQFDHLLPVFNDIYQTTQQQTYEKGVVS
Ga0207684_106436191	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFDQLLSVFRDLYQATQQNTYDAGVESGKVFQSC
Ga0207689_113047922	3300025942	Miscanthus Rhizosphere	MGLHIRDERQRKALTGLSQAPFDHLLPVFSDLYRATQQ
Ga0207712_102826652	3300025961	Switchgrass Rhizosphere	MGLHIRDERQRKALTGLSQAPFDHLLPVFSALYRANPATNI
Ga0207712_105241641	3300025961	Switchgrass Rhizosphere	MGLHIRDERQRKALTGLSQAPFDSLLPVFSDLYRATQQYTYKEG
Ga0209879_10066301	3300027056	Groundwater Sand	MGLQIRDDRQMKAFTGLSQAQFDHLLPIFSDIYQTTQQKTYRVVPQ
Ga0209897_10407402	3300027169	Groundwater Sand	MGLQIRDDRQMKALTGLSQDQFDHLLPFFSALYETTQQKMYAEGVESGTRR
Ga0209897_10409762	3300027169	Groundwater Sand	MGLLIRDDRQMKALTGLSQAQFDHLLPFFRDIYEATQQKTYEEEVE
Ga0209846_10187501	3300027277	Groundwater Sand	MGLQIRDDRQMKAFTGLSQAQFDHLLPIFSDIYQTTQQKTY
Ga0209842_10211041	3300027379	Groundwater Sand	MGLQIRDDRQRKAFTGLSQAQFDHLLPIFSDIDQTTQQK
Ga0209854_10388821	3300027384	Groundwater Sand	MGLQIRDDRQMKALTGLSQAQFDHLLPVFRDIYRATQQQTYEE
Ga0209854_10541331	3300027384	Groundwater Sand	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDLYQATQQHTYDTGVA
Ga0209843_10084223	3300027511	Groundwater Sand	MGLLIRDDRQMKALTGLSQAQFDHLLPIFSDIYQTTQQKTYEDGVKSGTRRRQ
Ga0209684_10224202	3300027527	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDLYPD
Ga0209588_11486702	3300027671	Vadose Zone Soil	MGLQIRDERQMKALTGLSQAQFDHLLPVFSDIYRKTQQQMYEEGVESGTRR
Ga0209590_105963172	3300027882	Vadose Zone Soil	MGLQIRDDRQRKALTGLSQAQFDPLLSVFSAIYRATQQKTYEAGVA
Ga0209590_110650791	3300027882	Vadose Zone Soil	MGLLIRDDRQMKALTGLSHAQFDHLLPVFSDIYQATQQHTYATGVASGT
Ga0209488_105946261	3300027903	Vadose Zone Soil	MGMLIRDDRQMKALTGLSQDQFDPLLPVFSDIYQATQQ
Ga0209488_106192821	3300027903	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGVEA
Ga0207428_104743911	3300027907	Populus Rhizosphere	MGLHMRDDRQMKALTGLSQAQFDHLLPVFRDIYRAT
Ga0207428_112704851	3300027907	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVS
Ga0209857_10436012	3300027957	Groundwater Sand	MGLHIRDERQLKALTGLSQAQVDHLLPVFSEVYTEQQQQKYAEGVAS
Ga0268265_112697761	3300028380	Switchgrass Rhizosphere	MGLHIRDDRQMQALTGVSQTQCDSLLLAFRDMYQVSQQKTY
Ga0307312_101353482	3300028828	Soil	MGLHIRDDRQMQALTGLSQAQFDHLLSVFSDLYQATQQNTYEEGIES
Ga0268255_101675972	3300030516	Agave	MGLHIRDDRQMQALTGLSQTQFDSLLLAFRDMYQVSQQKTYEEG
Ga0268386_105061182	3300030619	Soil	MGLVIRDDRQMKALTGLSQAQFDQLLPVFESTYQATQQQAYDPNFARL
Ga0308197_100356762	3300031093	Soil	MGRHIRDDRQMKAFTGLSQAQLDHLLPVFSDIYEATQQKAYEK
Ga0308187_102650421	3300031114	Soil	MGMLIRDDRQMKALTGLSQAQFAHLLPVFSEIYQITQQQTYEKGVEAGTRRRK
Ga0308179_10037931	3300031424	Soil	MGRHIRDDRQMKAFTGLSQAQLDHLLPVFSDIYEATQQKAYEKGVESGTRTREPG
Ga0318561_103325091	3300031679	Soil	MGIPVRDERHMKALTGLSQAQFDDLLSAFSDIYGAT
Ga0307469_102708892	3300031720	Hardwood Forest Soil	MGIQVRDERHMKALTGLSQAQFDDLLPAFSDLYGA
Ga0307468_1001143491	3300031740	Hardwood Forest Soil	MGMQIRDDRQMKALTGLSQAQFDHLLPVFNDLYQAIQH
Ga0307468_1010540291	3300031740	Hardwood Forest Soil	MGMQIRDERQMKALTGLSQAQFDRLLPVFSDIYQTTQQQTYEQGIESGTRVRT
Ga0306918_114042982	3300031744	Soil	MGLQIRDDRQMKALTGLSQVQFDYLLPYFSTIYASTQQKTYVEGVAA
Ga0306923_101849263	3300031910	Soil	MGRQIRDERQMKALTGLSQAQFDSLLPVFRDIYRATQQQTYEAGLQSGTR
Ga0310912_105385231	3300031941	Soil	MGIPVRDERHMKALTGLSQAQFDDLLSAFSDIYGATQRRHDEEGV
Ga0310909_112900261	3300031947	Soil	MGIHVRDERHMQALTGLSQAQFDDLWSAFSDLDGAT
Ga0306926_107659581	3300031954	Soil	MGLQIRDERQRKALTGLSQAQFDSLLPVFSDIYRAAQQQRYE
Ga0307471_1038618142	3300032180	Hardwood Forest Soil	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVSQQKTYEEG
Ga0335082_106654342	3300032782	Soil	MGLHSRDDRQMKAVPGLSPAQCDPLLSVFSDVDQTMQ
Ga0370548_015311_1002_1109	3300034644	Soil	MRDERQMKALTGLSQAQFDYLLPVFSDIYQATQQKT
Ga0314797_038967_3_164	3300034672	Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSAIYQAAQQQTYEKGVESGTRWRKP