Metagenome / Metatranscriptome Family F040927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040927
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	48 residues
Representative Sequence	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Number of Associated Samples	110
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.73 %
% of genes near scaffold ends (potentially truncated)	96.27 %
% of genes from short scaffolds (< 2000 bps)	94.41 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.988 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.267 % of family members)
Environment Ontology (ENVO)	Unclassified (52.174 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.068 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.42% β-sheet: 0.00% Coil/Unstructured: 56.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF00313	CSD	6.83
PF04392	ABC_sub_bind	3.11
PF03979	Sigma70_r1_1	1.86
PF00072	Response_reg	1.24
PF00848	Ring_hydroxyl_A	1.24
PF00248	Aldo_ket_red	1.24
PF08734	GYD	0.62
PF01139	RtcB	0.62
PF12850	Metallophos_2	0.62
PF02738	MoCoBD_1	0.62
PF13779	DUF4175	0.62
PF01904	DUF72	0.62
PF02969	TAF	0.62
PF08308	PEGA	0.62
PF00111	Fer2	0.62
PF13518	HTH_28	0.62
PF08309	LVIVD	0.62
PF07007	LprI	0.62
PF13439	Glyco_transf_4	0.62
PF12680	SnoaL_2	0.62
PF00534	Glycos_transf_1	0.62
PF03401	TctC	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.11
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	2.48
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.86
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.62
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.62
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.62
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.62
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.62
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.61 %
Unclassified	root	N/A	17.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.61 %
Unclassified	root	N/A	17.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.99 %
Unclassified	root	N/A	17.39 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.29 %
Unclassified	root	N/A	17.39 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	69.57 %
Unclassified	root	N/A	17.39 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	50.93 %
Unclassified	root	N/A	17.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.62 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	49.07 %
Unclassified	root	N/A	17.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.07 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.86 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	49.07 %
Unclassified	root	N/A	17.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.07 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.86 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	49.07 %
Unclassified	root	N/A	17.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.07 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.86 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	49.07 %
Unclassified	root	N/A	17.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.07 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.86 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02JXHRP	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1017041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300000956\|JGI10216J12902_108932493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300001431\|F14TB_102087795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300004633\|Ga0066395_10268359	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005174\|Ga0066680_10557360	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300005181\|Ga0066678_10461273	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	845	Open in IMG/M
3300005332\|Ga0066388_101938494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300005332\|Ga0066388_103210224	Not Available	835	Open in IMG/M
3300005332\|Ga0066388_105522957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300005363\|Ga0008090_10074064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
3300005363\|Ga0008090_10237083	Not Available	786	Open in IMG/M
3300005549\|Ga0070704_101842054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300005552\|Ga0066701_10829977	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300005553\|Ga0066695_10380161	Not Available	880	Open in IMG/M
3300005713\|Ga0066905_100140944	Not Available	1719	Open in IMG/M
3300005713\|Ga0066905_100796229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300005764\|Ga0066903_100772955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1711	Open in IMG/M
3300005764\|Ga0066903_102345545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300005764\|Ga0066903_102482940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1003	Open in IMG/M
3300005764\|Ga0066903_106250257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300005764\|Ga0066903_107074851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300005764\|Ga0066903_107232800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300006796\|Ga0066665_11240430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300006854\|Ga0075425_100209738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2239	Open in IMG/M
3300009137\|Ga0066709_103329535	Not Available	584	Open in IMG/M
3300010043\|Ga0126380_10076908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1917	Open in IMG/M
3300010043\|Ga0126380_11308727	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300010047\|Ga0126382_12040219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300010047\|Ga0126382_12548256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300010048\|Ga0126373_12819238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300010358\|Ga0126370_11638122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300010359\|Ga0126376_11732959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300010360\|Ga0126372_11384837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300010361\|Ga0126378_10453236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300010361\|Ga0126378_10606544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1209	Open in IMG/M
3300010361\|Ga0126378_10878856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300010362\|Ga0126377_10597110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1148	Open in IMG/M
3300010366\|Ga0126379_10736448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1082	Open in IMG/M
3300010366\|Ga0126379_11612276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300010366\|Ga0126379_12558617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300010366\|Ga0126379_12764407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	587	Open in IMG/M
3300010376\|Ga0126381_100940406	Not Available	1245	Open in IMG/M
3300010376\|Ga0126381_101842213	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300010376\|Ga0126381_104466680	Not Available	540	Open in IMG/M
3300010398\|Ga0126383_11039641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	908	Open in IMG/M
3300012198\|Ga0137364_10943768	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300012198\|Ga0137364_11049953	Not Available	614	Open in IMG/M
3300012199\|Ga0137383_10135348	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1800	Open in IMG/M
3300012201\|Ga0137365_10038407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3657	Open in IMG/M
3300012205\|Ga0137362_10920785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300012206\|Ga0137380_11298821	Not Available	612	Open in IMG/M
3300012211\|Ga0137377_10203421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1901	Open in IMG/M
3300012351\|Ga0137386_10052178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2828	Open in IMG/M
3300012353\|Ga0137367_10952846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300012355\|Ga0137369_10580062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300012356\|Ga0137371_11411793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300012357\|Ga0137384_10176716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1788	Open in IMG/M
3300012358\|Ga0137368_10473849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300012358\|Ga0137368_10875238	Not Available	550	Open in IMG/M
3300012358\|Ga0137368_10938714	Not Available	524	Open in IMG/M
3300012359\|Ga0137385_10598256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300012360\|Ga0137375_10523015	All Organisms → cellular organisms → Bacteria → Proteobacteria	1004	Open in IMG/M
3300012532\|Ga0137373_10707784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300012582\|Ga0137358_10829805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300012971\|Ga0126369_10299297	Not Available	1609	Open in IMG/M
3300012971\|Ga0126369_10994691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300012971\|Ga0126369_12676891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300016270\|Ga0182036_10656340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300016270\|Ga0182036_10834631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300016270\|Ga0182036_11634966	Not Available	543	Open in IMG/M
3300016294\|Ga0182041_11406999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300016319\|Ga0182033_10401049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300016319\|Ga0182033_11746696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300016341\|Ga0182035_10803342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300016341\|Ga0182035_10938058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300016357\|Ga0182032_11544262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300016387\|Ga0182040_10850182	Not Available	754	Open in IMG/M
3300016404\|Ga0182037_10333041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1231	Open in IMG/M
3300016445\|Ga0182038_11636534	Not Available	579	Open in IMG/M
3300018468\|Ga0066662_10410264	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300021560\|Ga0126371_10622308	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300021560\|Ga0126371_12527669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300021560\|Ga0126371_13771402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300025922\|Ga0207646_10126749	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300026310\|Ga0209239_1132220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1020	Open in IMG/M
3300026317\|Ga0209154_1225220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300026550\|Ga0209474_10656574	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300028881\|Ga0307277_10571801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300031543\|Ga0318516_10129938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1440	Open in IMG/M
3300031543\|Ga0318516_10367693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300031545\|Ga0318541_10154671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300031545\|Ga0318541_10170815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1198	Open in IMG/M
3300031545\|Ga0318541_10256702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300031545\|Ga0318541_10421215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300031549\|Ga0318571_10124337	Not Available	868	Open in IMG/M
3300031561\|Ga0318528_10205815	Not Available	1053	Open in IMG/M
3300031572\|Ga0318515_10099249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1525	Open in IMG/M
3300031573\|Ga0310915_10340447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1062	Open in IMG/M
3300031573\|Ga0310915_10938040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300031668\|Ga0318542_10297108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300031668\|Ga0318542_10425154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300031668\|Ga0318542_10646183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031679\|Ga0318561_10034692	Not Available	2458	Open in IMG/M
3300031680\|Ga0318574_10291058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300031680\|Ga0318574_10312855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300031682\|Ga0318560_10048733	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300031682\|Ga0318560_10258654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300031682\|Ga0318560_10310991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	849	Open in IMG/M
3300031719\|Ga0306917_10131765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1834	Open in IMG/M
3300031719\|Ga0306917_11431912	Not Available	532	Open in IMG/M
3300031724\|Ga0318500_10610441	Not Available	553	Open in IMG/M
3300031736\|Ga0318501_10306337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	848	Open in IMG/M
3300031744\|Ga0306918_10267231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1310	Open in IMG/M
3300031744\|Ga0306918_11087911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300031768\|Ga0318509_10180738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1170	Open in IMG/M
3300031770\|Ga0318521_10080335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1757	Open in IMG/M
3300031770\|Ga0318521_10253560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300031770\|Ga0318521_10663149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300031771\|Ga0318546_10535580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300031771\|Ga0318546_11282720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031777\|Ga0318543_10220116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300031778\|Ga0318498_10068291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1594	Open in IMG/M
3300031781\|Ga0318547_10277169	Not Available	1015	Open in IMG/M
3300031792\|Ga0318529_10259618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	808	Open in IMG/M
3300031805\|Ga0318497_10352254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300031821\|Ga0318567_10047664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2204	Open in IMG/M
3300031835\|Ga0318517_10257389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300031835\|Ga0318517_10393108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300031860\|Ga0318495_10068400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1581	Open in IMG/M
3300031879\|Ga0306919_10100792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2031	Open in IMG/M
3300031879\|Ga0306919_10820269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300031880\|Ga0318544_10166248	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300031893\|Ga0318536_10099867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1454	Open in IMG/M
3300031893\|Ga0318536_10223734	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300031896\|Ga0318551_10141711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1307	Open in IMG/M
3300031897\|Ga0318520_10634208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300031910\|Ga0306923_10444972	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300031912\|Ga0306921_10875349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300031912\|Ga0306921_11198037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300031942\|Ga0310916_10735625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300031945\|Ga0310913_10907484	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031945\|Ga0310913_11038690	Not Available	573	Open in IMG/M
3300031947\|Ga0310909_10852549	Not Available	750	Open in IMG/M
3300031954\|Ga0306926_10543034	Not Available	1424	Open in IMG/M
3300031954\|Ga0306926_11329616	Not Available	837	Open in IMG/M
3300031959\|Ga0318530_10135261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	996	Open in IMG/M
3300032025\|Ga0318507_10261371	Not Available	751	Open in IMG/M
3300032051\|Ga0318532_10031336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1772	Open in IMG/M
3300032052\|Ga0318506_10231467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	817	Open in IMG/M
3300032054\|Ga0318570_10458824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300032059\|Ga0318533_10638240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300032064\|Ga0318510_10082743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1195	Open in IMG/M
3300032065\|Ga0318513_10038915	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300032065\|Ga0318513_10676246	Not Available	506	Open in IMG/M
3300032066\|Ga0318514_10266076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300032067\|Ga0318524_10504861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300032068\|Ga0318553_10117151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1367	Open in IMG/M
3300032076\|Ga0306924_10328009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1756	Open in IMG/M
3300033289\|Ga0310914_11590311	Not Available	557	Open in IMG/M
3300033290\|Ga0318519_10186185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1178	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.38%
Host-Associated	Host-Associated	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.38%
Plants	Host-Associated → Plants	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.06%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.24%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.24%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_09105540	2170459024	Grass Soil	AFHHGAFEFRDDGKASRSLFDAVAGMTGLTPLVRELEARLAADVELKGAGTT
AF_2010_repII_A10DRAFT_10170413	3300000816	Forest Soil	AGTFEFGDDGEASRSLFDAVAEMTGLTPMVRELEARLTADVQLKSIDA*
JGI10216J12902_1089324932	3300000956	Soil	EALPAHAFHHGAFEFRDDGEASRSLFDAVADMTGLTPLVHELEARLAADVELKGADA*
F14TB_1020877952	3300001431	Soil	AFDFPDASRSLFEAVASITGLLPLVRELEARLEADVKSKDVDA*
Ga0066395_102683593	3300004633	Tropical Forest Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA*
Ga0066680_105573603	3300005174	Soil	ATASHQGAFDFPDASRSLFETVAGMTGLLPLVRELEARLEADAGSKDVDT*
Ga0066678_104612732	3300005181	Soil	ASHQGAFDFPDASRSLFEAVAGMTGLLPLVSELEARLEADGGI*
Ga0066388_1019384943	3300005332	Tropical Forest Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA*
Ga0066388_1032102241	3300005332	Tropical Forest Soil	LPDHASHEGAFDFPDASRSLFDAVAEMTGLTPMVRDIEARLVADVE*
Ga0066388_1055229571	3300005332	Tropical Forest Soil	ALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEVRLAADVEFKGGGA*
Ga0008090_100740642	3300005363	Tropical Rainforest Soil	FHHGAFEFRDDGDASRSLFDAVAVMTGLMPLVRELEGRLAADVGFKDIDA*
Ga0008090_102370832	3300005363	Tropical Rainforest Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADAEAVA*
Ga0070704_1018420542	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ATASHQGAFDFPDASRSLFEAVAGMTGLLPLVSQLEARLEADGGI*
Ga0066701_108299772	3300005552	Soil	FDFPDASRSLFEAVAGMTGLLPLVRELEARLEAGEESKDVDR*
Ga0066695_103801613	3300005553	Soil	FPDASRSLFEAVAGMTGLLRLVRELEARLEADAGSKDVDT*
Ga0066905_1001409443	3300005713	Tropical Forest Soil	MAALPAHAVHQGAFDFPDASRSLFDAVAVMTGLMPLVSELEARLAADVEFKGVDA*
Ga0066905_1007962291	3300005713	Tropical Forest Soil	DFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGT*
Ga0066903_1007729551	3300005764	Tropical Forest Soil	HHGAFEFRDDGDASRSLFDAVAVMTGLMPLVRELEGRLAADVELKGADA*
Ga0066903_1023455453	3300005764	Tropical Forest Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDLEFKGGSA*
Ga0066903_1024829403	3300005764	Tropical Forest Soil	FHHGAFEFRDDGEASRSLFDAVADMTGLTPLVHELEARLAADAELKGADA*
Ga0066903_1062502571	3300005764	Tropical Forest Soil	FHHGAFEFRDDGEASRSLFDAVAEMTGLKPMVRELEARLAADAE*
Ga0066903_1070748512	3300005764	Tropical Forest Soil	AFDFPDASRSLFDAVAEMIGLMPMMRELEARLAADVEFKDIEA*
Ga0066903_1072328002	3300005764	Tropical Forest Soil	FHHGAFEFRDDGEASRSLFDAVADMTGLTPLVHELEAGSPADVELKGADA*
Ga0066665_112404301	3300006796	Soil	GAFEFRDDGEASRSLFDAVAGMTGLTPLVRQLEARLAADVELKGADA*
Ga0075425_1002097381	3300006854	Populus Rhizosphere	QGAFDFPDASRSLFEAVAGMTGLLPLVSELEARLEADGGI*
Ga0066709_1033295351	3300009137	Grasslands Soil	LFAALPATASHQGAFDFPDASRSLFEAVAGMTGLLPLVRELEARLEADAES
Ga0126380_100769081	3300010043	Tropical Forest Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGT*
Ga0126380_113087271	3300010043	Tropical Forest Soil	VVLWEALPAHASHAGAFEFRDASRSLFDAVAEMTSLMPMVRELEVR
Ga0126382_120402192	3300010047	Tropical Forest Soil	PANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA*
Ga0126382_125482561	3300010047	Tropical Forest Soil	NASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKVMREKGQR*
Ga0126373_128192381	3300010048	Tropical Forest Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA*
Ga0126370_116381221	3300010358	Tropical Forest Soil	PHKGAFNFPDASRSLFDAVAEMTGLTPMVRELEARLAADVE*
Ga0126376_117329591	3300010359	Tropical Forest Soil	HHGAFEFRDDGDASRSLFDAVADMTGLTPLVHELEARLAADVELKGADA*
Ga0126372_113848371	3300010360	Tropical Forest Soil	DASRSLFDAVAEMIGLMPMVRELEARLAADVEFKVMREKGQR*
Ga0126378_104532364	3300010361	Tropical Forest Soil	FDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGT*
Ga0126378_106065442	3300010361	Tropical Forest Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEVRLAADVEFKGGGA*
Ga0126378_108788562	3300010361	Tropical Forest Soil	AHAFHHGAFEFRDDGDASRSLFDAVAVMTGLMPLVRELEGRLAADVGFKDVDA*
Ga0126377_105971102	3300010362	Tropical Forest Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEVRLAADVEFKGGGA*
Ga0126379_107364481	3300010366	Tropical Forest Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVGFKGGGA*
Ga0126379_116122761	3300010366	Tropical Forest Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKVMREKGQR*
Ga0126379_125586171	3300010366	Tropical Forest Soil	LPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA*
Ga0126379_127644071	3300010366	Tropical Forest Soil	EALPDHAPHKGAFNFPDASRSLFDAVAEMTGLTPMVRELEARLAADVEFKGGGA*
Ga0126381_1009404061	3300010376	Tropical Forest Soil	SHEGAFDFPDASRSLFDAVAEMTGLTPMVRDIEARLAADVE*
Ga0126381_1018422131	3300010376	Tropical Forest Soil	HASHEGAFDFPDASRSLFDAVAEMTGLTPMVRDIEARLVADVE*
Ga0126381_1044666801	3300010376	Tropical Forest Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADAEAVA*
Ga0126383_110396411	3300010398	Tropical Forest Soil	WEALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVGFKGGGA*
Ga0137364_109437681	3300012198	Vadose Zone Soil	ATASHQGAFDFPDASRSLFEAVAGMTGLLPLVRELEARLEADAESKDVDT*
Ga0137364_110499532	3300012198	Vadose Zone Soil	EGAFEFRDDGSRSLFEAVAVMTGLSPLVRELEARLAADVE*
Ga0137383_101353482	3300012199	Vadose Zone Soil	HGAFEFRDDGEASRSLFDAVAVMTGLMPLVRELEARLAADVEFKGGGA*
Ga0137365_100384076	3300012201	Vadose Zone Soil	VALWEALPATASHQGAFDFPDASRSLFEAVAGMTGLLPLVRELE
Ga0137362_109207851	3300012205	Vadose Zone Soil	HAFHHGAFEFRDDGEASRSLFDAVAGMTGLTPLVRELEARLAADVELKGADA*
Ga0137380_112988212	3300012206	Vadose Zone Soil	MATHASHEGAFEFRDDGSRSLFEAVAVMTGLSPLVRELEARLAADVE*
Ga0137377_102034214	3300012211	Vadose Zone Soil	PATASHQGAFDFPDASRSLFEAVAGMTDLLPLVRELEARLEADVESKDVDA*
Ga0137386_100521781	3300012351	Vadose Zone Soil	VALWEALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA*
Ga0137367_109528461	3300012353	Vadose Zone Soil	HGAFEFRDDGEASRSLFDAVAGMTGLTPLVRELEARLAGDVELKGANA*
Ga0137369_105800622	3300012355	Vadose Zone Soil	HHGAFEFRDDGEASRSLFDAVAGMTGLTPLVRELEARLEADVESKDVDA*
Ga0137371_114117932	3300012356	Vadose Zone Soil	ALPSHAFHHGAFEFRDDGEASRSLFDAVALMTGLMPLVRKLEARLAADVEFKGADA*
Ga0137384_101767164	3300012357	Vadose Zone Soil	VALWEALPAHAFHHGAFEFRDDGEASRSLFDAVAGMTGLLPLVRE
Ga0137368_104738491	3300012358	Vadose Zone Soil	HAFHHGAFEFRDDGEASRSLFDAVAGMTGLTPLVRELEARLAGDVELKGANA*
Ga0137368_108752382	3300012358	Vadose Zone Soil	EGTFEFRDDGSRSLFEAVAVMTGLSPLVRELEARLAADVE*
Ga0137368_109387142	3300012358	Vadose Zone Soil	WEAYPTHASHEGTFEFRDDGSRSLFEAVAVMTGLSPLVRELEARLAADVE*
Ga0137385_105982563	3300012359	Vadose Zone Soil	VALWEALPATASHQGAFDFPDASRSLFEAVAGMTGLLPLVRELEARL
Ga0137375_105230153	3300012360	Vadose Zone Soil	AYPTHASHEGTFEFRDDGSRSLFEAVAVMTGLSPLVRELEARLAADVE*
Ga0137373_107077841	3300012532	Vadose Zone Soil	HHGAFEFRDDGEASRSLFDAVAGMTGLTPLVRELEARLAADVELKGADA*
Ga0137358_108298051	3300012582	Vadose Zone Soil	AFDFPDASRSLFEAVAGMTGLLPLVSELEARLEADGGI*
Ga0126369_102992973	3300012971	Tropical Forest Soil	FHHGAFEFRDDGDASRSLFDAVAVMTGLMPLVRELEGRLAADVGFKDVDA*
Ga0126369_109946913	3300012971	Tropical Forest Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA*
Ga0126369_126768911	3300012971	Tropical Forest Soil	FHHGAFEFRDDGDASRSLFDAVAVMTGLMPLVRELEGRLAADVELKGADA*
Ga0182036_106563401	3300016270	Soil	NASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0182036_108346311	3300016270	Soil	LPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0182036_116349661	3300016270	Soil	HDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEALA
Ga0182041_114069991	3300016294	Soil	PANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0182033_104010491	3300016319	Soil	HDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0182033_117466962	3300016319	Soil	GAFDFPDASRSLFDAVAEMTGLTPLVRELEARLEADVESKDVDA
Ga0182035_108033421	3300016341	Soil	LPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0182035_109380582	3300016341	Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0182032_115442621	3300016357	Soil	NASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELKARLASDVEFKGGSA
Ga0182040_108501821	3300016387	Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVI
Ga0182037_103330411	3300016404	Soil	LPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLEADVESKGVDA
Ga0182038_116365342	3300016445	Soil	ALWEALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRGLEARLAADVEAVA
Ga0066662_104102641	3300018468	Grasslands Soil	ASRSLFEAVAGMTGLLRLVRELEARLEADAGSKDVDT
Ga0126371_106223083	3300021560	Tropical Forest Soil	FDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGT
Ga0126371_125276693	3300021560	Tropical Forest Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0126371_137714021	3300021560	Tropical Forest Soil	FEFRDDGDASRSLFDAVAVMTGLMPLVRELEGRLAADVELKGADA
Ga0207646_101267492	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TPNEGTFEFRDDGSRSLFEAVAVMTGLSPLVRELEARLAADVE
Ga0209239_11322201	3300026310	Grasslands Soil	ASHQGAFDFPDASRSLFEAVAGMTDLLPLVRELEARLEADVESKDVDA
Ga0209154_12252201	3300026317	Soil	GAFDFPDASRSLFEAVAGMTGLLPLVSELEARLEADGGI
Ga0209474_106565741	3300026550	Soil	PDASRSLFEAVAGMTGLLRLVRELEARLEADAGSKDVDT
Ga0307277_105718011	3300028881	Soil	VHGAFQIRDDGEASRSLFDAVAEMPGLMPVVRELEARLAADAE
Ga0318516_101299381	3300031543	Soil	SHAGTFEFGDDGEASRSLFDAVAEMTGLTPMVRELEARLTADVQLKSIDA
Ga0318516_103676932	3300031543	Soil	PANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318541_101546711	3300031545	Soil	DGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318541_101708152	3300031545	Soil	SWEALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318541_102567022	3300031545	Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318541_104212152	3300031545	Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318571_101243371	3300031549	Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVI
Ga0318528_102058151	3300031561	Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEALA
Ga0318515_100992493	3300031572	Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0310915_103404472	3300031573	Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0310915_109380401	3300031573	Soil	DGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0318542_102971081	3300031668	Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0318542_104251542	3300031668	Soil	WQAYPAHASHAGAFEFGDDGEASRSLFDAVAEMTGMVRELEVRLAADVEFKSVDA
Ga0318542_106461831	3300031668	Soil	ALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318561_100346921	3300031679	Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVI
Ga0318574_102910582	3300031680	Soil	DGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318574_103128552	3300031680	Soil	WEALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318560_100487331	3300031682	Soil	ASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVKFKDVEA
Ga0318560_102586542	3300031682	Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318560_103109911	3300031682	Soil	HDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0306917_101317654	3300031719	Soil	VALWEALPANASHDGAFDFPDASRSLFDAIAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0306917_114319121	3300031719	Soil	DGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVT
Ga0318500_106104411	3300031724	Soil	EAFPAHAAHQGAFDFPDASRSLFDAVAVMTGLMPLVSELEARLAADVEFKGVEA
Ga0318501_103063371	3300031736	Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0306918_102672311	3300031744	Soil	NASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0306918_110879111	3300031744	Soil	NASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0318509_101807384	3300031768	Soil	ASHDGAFDFPDASRSLFDAIAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318521_100803351	3300031770	Soil	ALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVI
Ga0318521_102535603	3300031770	Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVKFKDVEA
Ga0318521_106631491	3300031770	Soil	SHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318546_105355801	3300031771	Soil	DGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0318546_112827203	3300031771	Soil	NASHDGAFDFPDASRSMFDAIAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318543_102201162	3300031777	Soil	DGAFDFPDASRSLFDAVAEMIGLMPRVRELEARLAADVEFKGGGA
Ga0318498_100682911	3300031778	Soil	PANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318547_102771694	3300031781	Soil	HQGAFDFPDASRSLFDAVAVMTGLMPLVSELEARLAADVEFKGVEA
Ga0318529_102596183	3300031792	Soil	DFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0318497_103522541	3300031805	Soil	FDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0318567_100476645	3300031821	Soil	LWEALPDHAPHKGAFNFPDASRSLFDAVAEMTGLTPMVRELAARLAADVE
Ga0318517_102573891	3300031835	Soil	LPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0318517_103931083	3300031835	Soil	EALPDHAPHKDAFNFPDASRSLFDAVAEMTGLTPMVRELEARLAADVE
Ga0318495_100684001	3300031860	Soil	HDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0306919_101007925	3300031879	Soil	WEALPSHAFHHGAFEFRDDGEASRSLFDAVAGMTGLTPLVRELEARLAADVELKGVDA
Ga0306919_108202691	3300031879	Soil	GAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318544_101662483	3300031880	Soil	PHKGAFHFPDASRSLFDAVAEMTGLTPMVRELAARLAADVE
Ga0318536_100998671	3300031893	Soil	AFPAHASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVKFKDVEA
Ga0318536_102237342	3300031893	Soil	VEALPDHAPHKGAFHFPDASRSLFDAVAEMTGLTPMVRELAARLAADVE
Ga0318551_101417113	3300031896	Soil	EALPDHAPHKGAFHFPDASRSLFDAVAEMTGLTPMVRELAARLAADVE
Ga0318520_106342081	3300031897	Soil	AFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0306923_104449722	3300031910	Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0306921_108753493	3300031912	Soil	VALWEALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0306921_111980371	3300031912	Soil	FPDASRSLFDAVAEMTGLTPLVRELEARLEADVESKDVDA
Ga0310916_107356251	3300031942	Soil	ALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0310913_109074841	3300031945	Soil	DFPDASRSLFDAVAEMIGLMPMVRELEARLASDVEFKGGSA
Ga0310913_110386901	3300031945	Soil	EALPANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVA
Ga0310909_108525492	3300031947	Soil	EALPDHASHEGAFDFPDASRSLFDAVAEMTGLTPMVRDIEARLAADVE
Ga0306926_105430343	3300031954	Soil	WEALPDHASHEGAFDFPDASRSLFDAVAEMTGLTPMVRDIEARLAADVE
Ga0306926_113296161	3300031954	Soil	ANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEAVI
Ga0318530_101352611	3300031959	Soil	ASHDGAFDFPDASRSLFDAIAEMIGLMPMVRELEARLAADVELKGGGA
Ga0318507_102613711	3300032025	Soil	ASHDGGFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318532_100313364	3300032051	Soil	AHASHAGAFEFGDDGEASRSLFDAVAEMTGMVRELEVRLAADVEFKSVDA
Ga0318506_102314671	3300032052	Soil	AFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADLEFKGGGA
Ga0318570_104588242	3300032054	Soil	LPDHAPHKGAFHFPDASRSLFDAVAEMTGLTPMVRELAARLAADVE
Ga0318533_106382402	3300032059	Soil	LANASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLTADVEFKGSGT
Ga0318510_100827431	3300032064	Soil	LPANASHDGAFDFPDASRSLFDAIAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0318513_100389151	3300032065	Soil	PSWEAFPAHASHDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVKFKDVEA
Ga0318513_106762461	3300032065	Soil	WEALPAHAAHQGAFDFPDASRSLFDAVAEMTGLLPLVRELQARLASDVQ
Ga0318514_102660763	3300032066	Soil	LPDHAPHKGAFNFPDASRSLFDAVAEMTGLTPMVRELEARLAADVE
Ga0318524_105048613	3300032067	Soil	HKGAFNFPDASRSLFDAVAEMTGLTPMVRELAARLAADVE
Ga0318553_101171514	3300032068	Soil	HDGAFDFPDASRSLFDAVAEMIGLMPMVRELEARLAADVKFKDVEA
Ga0306924_103280091	3300032076	Soil	GVALGEALPANASHDGAFDFPDASRSLFDAIAEMIGLMPMVRELEARLAADVEFKGGGA
Ga0310914_115903112	3300033289	Soil	QGAFDFPDASRSLFEAVAGMTGLLPLVRELEARLEADVESKDVDA
Ga0318519_101861853	3300033290	Soil	CVALWEALPANASHDGAFDFPDASRSLFDAIAEMIGLMPMVRELEARLAADVEFKGGGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040927

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences