Metagenome / Metatranscriptome Family F040813

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040813
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	43 residues
Representative Sequence	LPANLSGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDLL
Number of Associated Samples	140
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.65 %
% of genes near scaffold ends (potentially truncated)	99.38 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.410 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.603 % of family members)
Environment Ontology (ENVO)	Unclassified (24.845 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.584 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF00202	Aminotran_3	54.04
PF13500	AAA_26	36.02
PF03030	H_PPase	2.48
PF06968	BATS	1.24
PF00155	Aminotran_1_2	1.24
PF08811	DUF1800	0.62
PF02738	MoCoBD_1	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	2.48
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.41 %
Unclassified	root	N/A	5.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.41 %
Unclassified	root	N/A	5.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.41 %
Unclassified	root	N/A	5.59 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.70 %
Unclassified	root	N/A	5.59 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.59 %
Unclassified	root	N/A	5.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	5.59 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	5.59 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.24 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	5.59 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1.24 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	5.59 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	1.24 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	5.59 %
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1.24 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10205620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300002914\|JGI25617J43924_10310616	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300002917\|JGI25616J43925_10365889	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300003350\|JGI26347J50199_1019208	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300003370\|JGI26337J50220_1009317	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300004092\|Ga0062389_103813742	Not Available	566	Open in IMG/M
3300004152\|Ga0062386_101570219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300004635\|Ga0062388_102474566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005187\|Ga0066675_10002358	All Organisms → cellular organisms → Bacteria	8551	Open in IMG/M
3300005518\|Ga0070699_101467876	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300005536\|Ga0070697_100570318	Not Available	993	Open in IMG/M
3300005541\|Ga0070733_10748675	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300005556\|Ga0066707_11026184	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300005560\|Ga0066670_10178309	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300005591\|Ga0070761_10536311	Not Available	724	Open in IMG/M
3300005598\|Ga0066706_10121468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1929	Open in IMG/M
3300005764\|Ga0066903_101187223	All Organisms → cellular organisms → Bacteria → Acidobacteria	1416	Open in IMG/M
3300005995\|Ga0066790_10072928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1478	Open in IMG/M
3300006032\|Ga0066696_10834426	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300006050\|Ga0075028_100317056	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300006050\|Ga0075028_100535219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300006057\|Ga0075026_100421399	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300006173\|Ga0070716_100224477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300006174\|Ga0075014_101024215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300006176\|Ga0070765_100280479	All Organisms → cellular organisms → Bacteria → Acidobacteria	1535	Open in IMG/M
3300006579\|Ga0074054_10791208	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300006642\|Ga0075521_10297752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300006796\|Ga0066665_10535394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300006800\|Ga0066660_11156811	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300006806\|Ga0079220_10720157	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300006854\|Ga0075425_102114137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300006893\|Ga0073928_10739375	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300007076\|Ga0075435_100297397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1380	Open in IMG/M
3300007265\|Ga0099794_10118611	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300009012\|Ga0066710_101613087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300009088\|Ga0099830_10135466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1879	Open in IMG/M
3300009088\|Ga0099830_11712778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009519\|Ga0116108_1088994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300009839\|Ga0116223_10157649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1406	Open in IMG/M
3300010043\|Ga0126380_10367503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300010046\|Ga0126384_12431553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	507	Open in IMG/M
3300010359\|Ga0126376_12452784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300010361\|Ga0126378_12569667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010376\|Ga0126381_103408713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300010376\|Ga0126381_105092075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300010379\|Ga0136449_103538925	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300010398\|Ga0126383_13018872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010877\|Ga0126356_11348708	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300011269\|Ga0137392_10025166	All Organisms → cellular organisms → Bacteria	4242	Open in IMG/M
3300011269\|Ga0137392_10595803	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300012189\|Ga0137388_10147396	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300012189\|Ga0137388_10619086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300012189\|Ga0137388_11317739	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300012203\|Ga0137399_10154989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1833	Open in IMG/M
3300012205\|Ga0137362_10109684	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300012206\|Ga0137380_10232870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1664	Open in IMG/M
3300012209\|Ga0137379_11335049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300012359\|Ga0137385_10694957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300012361\|Ga0137360_10973751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300012362\|Ga0137361_11381343	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300012363\|Ga0137390_10848591	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300012363\|Ga0137390_11365129	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300012363\|Ga0137390_11903608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012582\|Ga0137358_10467140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300012917\|Ga0137395_10340160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300012922\|Ga0137394_11582583	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300012924\|Ga0137413_10879205	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300012925\|Ga0137419_10350960	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300012927\|Ga0137416_11410218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012929\|Ga0137404_11627709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012944\|Ga0137410_11319362	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300012944\|Ga0137410_12100111	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300012944\|Ga0137410_12125643	Not Available	501	Open in IMG/M
3300015242\|Ga0137412_10208043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1560	Open in IMG/M
3300015264\|Ga0137403_10141271	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300016294\|Ga0182041_12182303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300016371\|Ga0182034_11941124	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300016445\|Ga0182038_10131408	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300016445\|Ga0182038_10408066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300017822\|Ga0187802_10006137	All Organisms → cellular organisms → Bacteria → Acidobacteria	3687	Open in IMG/M
3300017934\|Ga0187803_10362447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300017943\|Ga0187819_10686267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300017972\|Ga0187781_11456942	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300018001\|Ga0187815_10336939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	640	Open in IMG/M
3300018012\|Ga0187810_10019931	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300020579\|Ga0210407_10075993	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300021086\|Ga0179596_10722182	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300021401\|Ga0210393_10358516	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300021405\|Ga0210387_10374725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300021405\|Ga0210387_11091476	Not Available	696	Open in IMG/M
3300021406\|Ga0210386_11560378	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300021407\|Ga0210383_10539577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1007	Open in IMG/M
3300021433\|Ga0210391_10952696	Not Available	669	Open in IMG/M
3300021478\|Ga0210402_10043307	All Organisms → cellular organisms → Bacteria	3919	Open in IMG/M
3300021559\|Ga0210409_10846038	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300021559\|Ga0210409_11680384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300022722\|Ga0242657_1246141	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300024279\|Ga0247692_1063239	Not Available	577	Open in IMG/M
3300024288\|Ga0179589_10005418	All Organisms → cellular organisms → Bacteria → Proteobacteria	3424	Open in IMG/M
3300024330\|Ga0137417_1441193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1643	Open in IMG/M
3300025916\|Ga0207663_10230186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300025916\|Ga0207663_11008239	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300025939\|Ga0207665_10035237	All Organisms → cellular organisms → Bacteria	3321	Open in IMG/M
3300026285\|Ga0209438_1058898	All Organisms → cellular organisms → Bacteria → Acidobacteria	1265	Open in IMG/M
3300026301\|Ga0209238_1141327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300026319\|Ga0209647_1059912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1988	Open in IMG/M
3300026322\|Ga0209687_1099691	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300026333\|Ga0209158_1051483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300026497\|Ga0257164_1075770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300026538\|Ga0209056_10446232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300026548\|Ga0209161_10036982	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300026551\|Ga0209648_10698218	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300026828\|Ga0207502_103521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300027010\|Ga0207839_1028523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300027042\|Ga0207766_1025676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300027182\|Ga0208952_1009965	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300027559\|Ga0209222_1101951	Not Available	555	Open in IMG/M
3300027590\|Ga0209116_1094520	Not Available	656	Open in IMG/M
3300027738\|Ga0208989_10188089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300027812\|Ga0209656_10267388	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300027857\|Ga0209166_10293704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300027862\|Ga0209701_10105927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1753	Open in IMG/M
3300027882\|Ga0209590_10974677	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300027898\|Ga0209067_10328068	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300027903\|Ga0209488_10167035	All Organisms → cellular organisms → Bacteria → Acidobacteria	1662	Open in IMG/M
3300027903\|Ga0209488_10314957	All Organisms → cellular organisms → Bacteria → Acidobacteria	1167	Open in IMG/M
3300027910\|Ga0209583_10249333	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300028069\|Ga0255358_1053196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300028381\|Ga0268264_10033373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4227	Open in IMG/M
3300028536\|Ga0137415_10244502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1604	Open in IMG/M
3300029951\|Ga0311371_10951521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1030	Open in IMG/M
3300030707\|Ga0310038_10253561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031231\|Ga0170824_104382042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300031549\|Ga0318571_10238780	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300031572\|Ga0318515_10683580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031679\|Ga0318561_10341374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300031681\|Ga0318572_10830626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031736\|Ga0318501_10844495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300031744\|Ga0306918_11334061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031747\|Ga0318502_10648832	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300031754\|Ga0307475_10382811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300031820\|Ga0307473_10642766	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300031823\|Ga0307478_10340943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300031823\|Ga0307478_11566705	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300031879\|Ga0306919_10106802	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300031897\|Ga0318520_11061489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300031954\|Ga0306926_10975829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300031962\|Ga0307479_10521506	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300031962\|Ga0307479_11188756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300031962\|Ga0307479_11265928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300031962\|Ga0307479_11557537	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300032025\|Ga0318507_10043411	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300032054\|Ga0318570_10468690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300032059\|Ga0318533_10335245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300032160\|Ga0311301_10753391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1352	Open in IMG/M
3300032180\|Ga0307471_100515685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300032180\|Ga0307471_100814093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300032261\|Ga0306920_101222585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300033134\|Ga0335073_11802269	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300034091\|Ga0326724_0053981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2895	Open in IMG/M
3300034091\|Ga0326724_0103255	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.14%
Host-Associated	Host-Associated	1.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.34%
Aquatic	Environmental → Aquatic	11.80%
Plants	Host-Associated → Plants	1.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.85%
Freshwater	Environmental → Aquatic → Freshwater	7.45%
Sediment	Environmental → Aquatic → Sediment	3.73%
Peat	Environmental → Terrestrial → Peat	2.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.24%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.67%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.24%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.11%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.24%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.62%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Bulk Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026828	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027182	Bulk soil microbial communities from Harvard Forest, USA - 3Bulk_unsorted metaG (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102056202	3300001867	Forest Soil	LVTLVSGWKQKVVIFAGALGAPGLFLISFLDSSILTFPV
JGI25617J43924_103106161	3300002914	Grasslands Soil	LVVSLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLLIELS
JGI25616J43925_103658892	3300002917	Grasslands Soil	LVVSLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTLPVINDL
JGI26347J50199_10192082	3300003350	Bog Forest Soil	VSLSLNTWKQKIVAFASGLGAPGLFIISFLDSSVLSFPIIN
JGI26337J50220_10093173	3300003370	Bog Forest Soil	VELRVSLSLNTWKQKIVAFASGLGAPGLFIISFLDSSVLSFPI
Ga0062389_1038137421	3300004092	Bog Forest Soil	LSGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLL
Ga0062386_1015702192	3300004152	Bog Forest Soil	LHKLNAWKQKIILFAGSLGAPGLFLISFLDSSVLSFPIIND
Ga0062388_1024745661	3300004635	Bog Forest Soil	LPSKLNVWKQKIILFSASLGAPGLFLISFLDSSVLSFPIIN
Ga0066675_100023581	3300005187	Soil	VPASLSGWKQKVVAFASGLGAPGLFLISFLDSSVLTFPVINDLL
Ga0070699_1014678761	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSLDGKLTGWKQRIVALAGTLGAPGLFLISFLDSSVLTFPVI
Ga0070697_1005703181	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LSSGLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLL
Ga0070733_107486752	3300005541	Surface Soil	LSLGLSGWKQKIVAFAGGLGAPGLLLISFLDSSVLTFPVINDLLLIEL
Ga0066707_110261842	3300005556	Soil	LATSLNGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPIINDLLLIE
Ga0066670_101783093	3300005560	Soil	VPSSLSGWKQKVVAFASGLGAPGLFLISFLDSSVLTF
Ga0070761_105363112	3300005591	Soil	LQGNLTGWKQKVVGFAATLGWPGLFMISFLDSSVLTFPVINDLLLISLSMQ
Ga0066706_101214683	3300005598	Soil	LSSGLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVIN
Ga0066903_1011872233	3300005764	Tropical Forest Soil	MSGWIRKIGVLAGGLGAPGLLLISFLDSSFLTFPIINDGLLID
Ga0066790_100729281	3300005995	Soil	LPANLNGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDL
Ga0066696_108344261	3300006032	Soil	LATSLNGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPIINDLL
Ga0075028_1003170562	3300006050	Watersheds	LPPSLSGWKQKVVAFASGLGAPGLFLISFLDSSVLTFP
Ga0075028_1005352191	3300006050	Watersheds	LPFQLNTWKQKIVGFAGALGAPGLFLISFLDSSVLTFPVINDL
Ga0075026_1004213992	3300006057	Watersheds	LPSKLGAWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLL
Ga0070716_1002244772	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LDLNLGGWKTKIVALAGTLGAPGLFLISLLDSSVLSFPIINDLLLI
Ga0075014_1010242152	3300006174	Watersheds	LAVPLTGWKQKIVVFAGALGAPGLFLISFLDSSVL
Ga0070765_1002804792	3300006176	Soil	LSLGLNGWKQKIIAFAGGLGAPGLLLISFLDSSVLS
Ga0074054_107912081	3300006579	Soil	LQHPPSAWKQKIVTFAGALGAPGLFLISFLDSSVLSFPIIN
Ga0075521_102977521	3300006642	Arctic Peat Soil	LQHPPSPWKQKIITFAGALGAPGLLLISFLDSSVL
Ga0066665_105353941	3300006796	Soil	LESKLALWRHKIVAYAGGLGATGLFAISFLDSSVLT
Ga0066660_111568112	3300006800	Soil	LATGLSGWKEKIVAFAGGLGAPGLFLISFLDSSVLTFPV
Ga0079220_107201571	3300006806	Agricultural Soil	LAAGLNAWKEKIVAFAGSLGAPGLFLTSFLDSSVLTFPVINDL
Ga0075425_1021141372	3300006854	Populus Rhizosphere	LALGMNGWKEKIVAFAGSLGAPGLFLISFLDSSVLTFPVI
Ga0073928_107393751	3300006893	Iron-Sulfur Acid Spring	LPSKLGAWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDLL
Ga0075435_1002973971	3300007076	Populus Rhizosphere	LALGMNGWKEKIVAFAGSLGAPGLFLISFLDSSVLTFPV
Ga0099794_101186111	3300007265	Vadose Zone Soil	LPAQIGAWKQKIVAFAGTLGAPGLFLISFLDSSVLTF
Ga0066710_1016130872	3300009012	Grasslands Soil	LPPGLGGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVI
Ga0099830_101354663	3300009088	Vadose Zone Soil	LTSTLSGWKQKIVAFAGALGAPGLFLISFLDSSVLTFPVINDLLL
Ga0099830_117127781	3300009088	Vadose Zone Soil	LPFQLNTWKQKIVGFAGALGAPGLFLISFLDSSVLT
Ga0116108_10889941	3300009519	Peatland	LTAPLSGWKQKIVVFAGTLGAPGLFLISFLDSSVLTFPV
Ga0116223_101576492	3300009839	Peatlands Soil	LTAPLSGWKQKIVFFAGTLGAPGLFLISFLDSSVLTFPVINDLLLIELS
Ga0126380_103675031	3300010043	Tropical Forest Soil	LFSWLKTVKGKIIAFAATLGGPGLLLISFLDSSVLTFPIINDLLLVDLAVQNP
Ga0126384_124315531	3300010046	Tropical Forest Soil	LPANLSGWKQKIVAFAGGIGAPGLFLISFLDSSVLTFPVINDLLLIELAV
Ga0126376_124527841	3300010359	Tropical Forest Soil	LFSWLKTLKGKIIAFASVLGAPGLLLISFLDSSVLTFPVINDLLLID
Ga0126378_125696671	3300010361	Tropical Forest Soil	LQAQLTGWKQKIVAFAGALGAPGLFLISFLDSSVLTFPVINDL
Ga0126381_1034087131	3300010376	Tropical Forest Soil	LTAPLSGWKQKIVAFAGALGAPGLFLISFLDSSILTFPVI
Ga0126381_1050920751	3300010376	Tropical Forest Soil	MNAWKQRIVAFAGSLGAPGLFLISFLDSSVLTFPVINDL
Ga0136449_1035389252	3300010379	Peatlands Soil	LLPQLSAWKQKIVAFAGTLGAPGLVLISFLDSSVLTFPVINDLLLIELSIQHPA
Ga0126383_130188721	3300010398	Tropical Forest Soil	LHPKLSSWKHKIAVLAASLGAPGLFLVSFLDSSVLTLPVIN
Ga0126356_113487082	3300010877	Boreal Forest Soil	LALSLNSWKQKVIAFASGLGAPGLLLISFLDSSVLSFPIINDLLL
Ga0137392_100251661	3300011269	Vadose Zone Soil	LPANLSGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDLL
Ga0137392_105958032	3300011269	Vadose Zone Soil	LPGQLGTWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPV
Ga0137388_101473961	3300012189	Vadose Zone Soil	MSLPSNLSGWKQKLVAFATGLGAPGLFLISFLDSSVLTFPVIND
Ga0137388_106190861	3300012189	Vadose Zone Soil	LPANLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLLIE
Ga0137388_113177392	3300012189	Vadose Zone Soil	LPLQIGTWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPVINDLL
Ga0137399_101549891	3300012203	Vadose Zone Soil	LPANLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDRSE
Ga0137362_101096841	3300012205	Vadose Zone Soil	LPGQIGAWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPVINDLLL
Ga0137380_102328701	3300012206	Vadose Zone Soil	LESKLALWRHKIVAYAGGLGATGLFAISFLDSSVLTFPVINDLL
Ga0137379_113350492	3300012209	Vadose Zone Soil	VPNKGGKRLPPSLNGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVIN
Ga0137385_106949572	3300012359	Vadose Zone Soil	LESKLALWRHKIVAYAGGLGATGLFAISFLDSSVLTFPVINDLLLIDLSI
Ga0137360_109737511	3300012361	Vadose Zone Soil	LPFQLNTWKQKIVGFAGALGAPGLFLISFLDSSVLTFPVINDLL
Ga0137361_113813432	3300012362	Vadose Zone Soil	LPVQIGTWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPVI
Ga0137390_108485911	3300012363	Vadose Zone Soil	LPAQLGAWKQKIVAFAGALGAPGLFLISFLDSSILTFSIINDLLLIDLSMRRPA
Ga0137390_113651291	3300012363	Vadose Zone Soil	LPGQLGTWKQKIVAFAGTLGAPGLFLTSFLDSSVLTFPVINDLLLIE
Ga0137390_119036081	3300012363	Vadose Zone Soil	MSGWKQKVVAFGSGLGAPGLFLISFLDSSVLTFPIINDLLLIE
Ga0137358_104671402	3300012582	Vadose Zone Soil	LPFQLNTWKQKIVGFAGTRGAPGLFLISFLDSAVLTFP
Ga0137395_103401601	3300012917	Vadose Zone Soil	LPAQLGAWKQKIVAFAGALGAPGLFLISFLDSSILTFPIINDL
Ga0137394_115825832	3300012922	Vadose Zone Soil	LPAQLGAWKQKIVAFAGALGAPGLFLISFLDSSILTFP
Ga0137413_108792051	3300012924	Vadose Zone Soil	VGGYLFSWLKAWKVKIVAFATTLGGPGLLLISFLDSSVLTFPIINDLLL
Ga0137419_103509602	3300012925	Vadose Zone Soil	VPSSLSGWKQKVVAFASGLGAPGLFLISFLDSSVLTFPIIN
Ga0137416_114102182	3300012927	Vadose Zone Soil	VPSSLSGWKAKVVAFAGGLGAPGLFLISFLDSSVLTFPVI
Ga0137404_116277091	3300012929	Vadose Zone Soil	LPFQLNTWKQKIVGFAGTLGAPGLFLISFLDSSVLTFPVINDLLLI
Ga0137410_113193621	3300012944	Vadose Zone Soil	MSLPSNLSGWKQKIVAFATGLGAPGLFLISFLDSSVLT
Ga0137410_121001111	3300012944	Vadose Zone Soil	LPAQLGVWKQRIVAFAGTLGAPGLFLISFLDSSFLTFPVINDL
Ga0137410_121256431	3300012944	Vadose Zone Soil	MNLSGWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPVIND
Ga0137412_102080431	3300015242	Vadose Zone Soil	LPFGLNTWKQKIVGFAGTLGAPGLFLISFLDSSVLTFPVINDL
Ga0137403_101412713	3300015264	Vadose Zone Soil	LGTSLSGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPIINDLLL
Ga0182041_121823031	3300016294	Soil	LTAPLSGWKQKIVAFAGALGAPGLFLISFLDSSILT
Ga0182034_119411242	3300016371	Soil	LNPKLSGWKQKIVAFAGALGAPGLFLISFLDSSVLTFPVIN
Ga0182038_101314084	3300016445	Soil	LQAQLSGWKQKIVAFAGALGAPGLFLISFLDSSVLTFP
Ga0182038_104080661	3300016445	Soil	LDGRLSLWKQKIVALAGTLGALGLFLISFLDSSVLTFPVINDLLLVQLS
Ga0187802_100061371	3300017822	Freshwater Sediment	VGLNAWKQKIVAFAGGLGAPGLFLISCLDSSVLTFPVINDLLLIELSIQTPP
Ga0187803_103624471	3300017934	Freshwater Sediment	LAAPLSGWKQKIVLFAGTLGAPGLFLISFLDSSVLTFPVINDLLLIE
Ga0187819_106862672	3300017943	Freshwater Sediment	LIGQLSGWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPVIND
Ga0187781_114569421	3300017972	Tropical Peatland	LPSSLNTWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLL
Ga0187815_103369391	3300018001	Freshwater Sediment	LPSPLTAWKQRIVAFAGTLGAPGLFLISFLDSSILTFPVIND
Ga0187810_100199311	3300018012	Freshwater Sediment	LTAPLSGWKQKIVAFAGALGAPGLFLISFLDSSVLTFP
Ga0210407_100759931	3300020579	Soil	VPLREREILVGKLSGWKQKIVVFAGTLGAPGLFLISFLDSSVLTFPVIND
Ga0179596_107221821	3300021086	Vadose Zone Soil	LPGQIGTWKQKIVAFAGTLGAPGLFLISFLDSSVLT
Ga0210393_103585163	3300021401	Soil	LSVSLNGWKQKIIAFASGLGAPGLLLISYLDSSVLSFPIINDLLLIQL
Ga0210387_103747251	3300021405	Soil	LQGNLTGWKQKVVGFAATLGWPGLFMISFLDSSVLTFPVIN
Ga0210387_110914762	3300021405	Soil	LPANLSGWKQKVVAFAGGLGAPGLFLISFLDSSILT
Ga0210386_115603782	3300021406	Soil	LSVSLNGWKQKIIAFASGLGAPGLFLISYLDSSVLSFPIIND
Ga0210383_105395772	3300021407	Soil	LQGNLSGWKQKVVGFAATLGWPGLFMISFLDSSVLTFP
Ga0210391_109526962	3300021433	Soil	LPANLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLLIELCI
Ga0210402_100433073	3300021478	Soil	LRLSVSLNGWKQKIIAFASGLGAPGLLLISYLDSSVLSFPIINDLLLIQLS
Ga0210409_108460381	3300021559	Soil	LPPNSSGWKQKIAAFAGGLGAPGLFLISFLDSSFLT
Ga0210409_116803841	3300021559	Soil	LPFQLNTWKQKIVSFAGALGAPGLFLISFLDSSVLTFPVINDLLLIELSVE
Ga0242657_12461412	3300022722	Soil	LSVSLNGWKQKIIAFASGLGAPGLFLISYLDSSVLSFPIINDLLL
Ga0247692_10632392	3300024279	Soil	MNLSGWKQKIVAFAGTLGAPGLFLISFLDSSVLTFPVINDLL
Ga0179589_100054185	3300024288	Vadose Zone Soil	LPFGLNTWKQKIVGFAGTLGAPGLFLISFLDSSVVTFP
Ga0137417_14411934	3300024330	Vadose Zone Soil	LPFQLNTWKQKIVGFAGTLGAPGLFLISFLDSSVLTFP
Ga0207663_102301861	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LSAWKQKIVAFAGVLGAPGLFLISFLDSSVLTFPVIND
Ga0207663_110082392	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LDLNLGGWKTKIVAFAGTLGAPGLFLISLLDSSVLTFPVINDLLLIELSV
Ga0207665_100352371	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LDLNLGGWKTKIVALAGTLGAPGLFLISLLDSSVLSFPIINDLLLID
Ga0209438_10588982	3300026285	Grasslands Soil	MSLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLLIELCRA
Ga0209238_11413272	3300026301	Grasslands Soil	MGGYLFSWLKVWKVKIVAFATTLGGPGLLLISFLDSSVLT
Ga0209647_10599121	3300026319	Grasslands Soil	LFSWLNAWKNRVHVFAAALGAPGLFLISFLDSSFVPFPIIN
Ga0209687_10996912	3300026322	Soil	LATGLSGWKENIVAFAGGLGAPGLFLISFLDSSVLTFPVIND
Ga0209158_10514831	3300026333	Soil	LPPGLGGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVIND
Ga0257164_10757702	3300026497	Soil	LPFQLNTWKQKIVGFAGALGAPGLFLISFLDSSVLTFPVINDLLLIEL
Ga0209056_104462322	3300026538	Soil	LESKLALWRHKIVAYAGGLGATGLFAISFLDSSVLTF
Ga0209161_100369821	3300026548	Soil	LNGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFLIINDLL
Ga0209648_106982182	3300026551	Grasslands Soil	LATGLSGWKQKVVAFAGALGAPGLFLISFLDSSVLTFP
Ga0207502_1035212	3300026828	Soil	LAGKLSVWKQKIVVFAGTLGAPGLFLISFLDSSVLTFPVINDLLLIELS
Ga0207839_10285231	3300027010	Tropical Forest Soil	LAAPLSGWKQKIVGFAGALGAPGLFLISFLDSSILTFPVINDLLL
Ga0207766_10256762	3300027042	Tropical Forest Soil	LQSPHPLTGWKQKVVTFAGALGAPGLFLISFLDSSV
Ga0208952_10099652	3300027182	Bulk Soil	LGGFLNRWKQKIVLFAGALGAPGLFLISFLDSSVLTFPVINDLLLIE
Ga0209222_11019512	3300027559	Forest Soil	LQGNLSGWKQKIVAFAGSLGWPGLFMISFLDSSVLTFPVINDLLLISLSMQKPSRMIL
Ga0209116_10945201	3300027590	Forest Soil	LQGNLSGWKQKIVAFAGSLGWPGLFMISFLDSSVLTFPVINDLLLIS
Ga0208989_101880892	3300027738	Forest Soil	LQARLSGWKQKIVVFAGALGAPGLFLISFLDSSVLTFPVINDLLLIELC
Ga0209656_102673882	3300027812	Bog Forest Soil	LALSLNSWKLKIIAFATGLGAPGLLLISFLDSSVLSFPIINDLLLIDLSM
Ga0209166_102937042	3300027857	Surface Soil	LGGKLNVWKTKIVAFAGTLGAPGLFLISFLDSSVLTFPV
Ga0209701_101059271	3300027862	Vadose Zone Soil	LLAQLGAWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVINDL
Ga0209590_109746772	3300027882	Vadose Zone Soil	LGELPLATSLNGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVIND
Ga0209067_103280682	3300027898	Watersheds	LPSGLSGWKEKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLL
Ga0209488_101670351	3300027903	Vadose Zone Soil	LPGQIGTWKQKIVAFAGTLGAPGLFLISFLDSSVLTFP
Ga0209488_103149571	3300027903	Vadose Zone Soil	VPSSLSGWKQKVVAFASGLGAPGLFLISFLDSSVLTFPI
Ga0209583_102493332	3300027910	Watersheds	LSLGLSGWKQKIVAFAGGLGAPGLLLISFLDSSVLTFPVINDLLLIELSIQH
Ga0255358_10531962	3300028069	Soil	LAAPLSGWKQKIVVFAGTLGAPGLFLISFLDSSVLTFPVINDLLLIELSI
Ga0268264_100333731	3300028381	Switchgrass Rhizosphere	LSSGLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDLLLIE
Ga0137415_102445021	3300028536	Vadose Zone Soil	VPSSLSGWKAKVVAFASGLGAPGLFLISFLDSSVLTF
Ga0311371_109515211	3300029951	Palsa	MTVARGNALPSKFTVWKQKIILLAGAWGAPGLLLISFLDSSVLSFPIINDLLLVELS
Ga0310038_102535612	3300030707	Peatlands Soil	LAAPLSGWKQKIVVFAGTLGAPGLFLISFLDSSVLTFPVINDLLLIEL
Ga0170824_1043820422	3300031231	Forest Soil	MTDSGEPLLDVKLSGWKQKIVAFAGALGAPGLFLISFLDSSVLTFPVI
Ga0318571_102387802	3300031549	Soil	LPSILNQWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPVVNDLLLI
Ga0318515_106835802	3300031572	Soil	LQAQLSGWKQKIVAFAGALGAPGLFLISFLDSSVL
Ga0318561_103413741	3300031679	Soil	LAASLNGWKQKIVAFAGALGAPGLFLISFLDSSILTFPVINDLL
Ga0318572_108306261	3300031681	Soil	LAAPLSGWKQKIVAFGGALGAPGLFLISFLDSSILT
Ga0318501_108444952	3300031736	Soil	LTAPLSGWKQKIVAFAGALGAPGLFLISFLDSSILTFPVIN
Ga0306918_113340612	3300031744	Soil	LDGKLDLWKQKIAAFAGTLGAPGLLLISFLDSSVLTFPVINDLLLVQL
Ga0318502_106488323	3300031747	Soil	LAAPMSGWKQKIVGFAGALGAPGLFLISFLDSSILTFPVIN
Ga0307475_103828112	3300031754	Hardwood Forest Soil	LPAQLGAWKQKIVGFAGTLGAPGLFLISFLDSSFLTFPVIN
Ga0307473_106427662	3300031820	Hardwood Forest Soil	VSLNLNGWKEKIVAFGTGLGAPGLLLISFLDSSVLSFPIINDLLLIELS
Ga0307478_103409433	3300031823	Hardwood Forest Soil	LLLNLSLNTWKQKIIAFAGGLGAPGLLLISFLDSSVLSFPIINDLLLIQLSMQNHA
Ga0307478_115667052	3300031823	Hardwood Forest Soil	VPSSLSGWKQKIVAFAGGLGAPGLFLISFLDSSVLTFPV
Ga0306919_101068021	3300031879	Soil	LTVPLNAWRQKIVGYAGALGAPGLFLISFLDSSVLT
Ga0318520_110614892	3300031897	Soil	LTASLSGWKQKIVAFAGALGAPGLFLISFLDSSILTFPVINDLL
Ga0306926_109758291	3300031954	Soil	LDGKLDLWKQKIAAFAGTLGAPGLLLISFLDSSVLTFPVINDL
Ga0307479_105215061	3300031962	Hardwood Forest Soil	LDGKLSGWKLKIVGFAGALGAPGLFLISFLDSSVLTFPVIND
Ga0307479_111887561	3300031962	Hardwood Forest Soil	VQCLVIAVHTWKQKLVAFAGSLGAPGLFLISFLDSSVLT
Ga0307479_112659282	3300031962	Hardwood Forest Soil	LPVNLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVINDL
Ga0307479_115575371	3300031962	Hardwood Forest Soil	MSLSGWKQKVVAFAGGLGAPGLFLISFLDSSVLTFPVIND
Ga0318507_100434113	3300032025	Soil	LTAPLSGWKQKIVAFAGALGAPGLFLISFLDSSILTF
Ga0318570_104686902	3300032054	Soil	LTAPLSGWKQKIVAFAGALGAPGLFLISFLDSSILTFPV
Ga0318533_103352452	3300032059	Soil	LEGKLSLWKRKIVAFAGALGAPGLFLVSFLDSSVLTF
Ga0311301_107533911	3300032160	Peatlands Soil	LPANLSGWKQKVVAFASGLGAPGLFLISFLDSSVLTFPVIN
Ga0307471_1005156851	3300032180	Hardwood Forest Soil	LTSPLSAWKQKIVAFAGVLGAPGLFLISFLDSSVLTFPVINDLLLI
Ga0307471_1008140932	3300032180	Hardwood Forest Soil	LDGKLSAWKQKIVMFAGTLGAPGLFLISFLDSSVLTFPVINDLL
Ga0306920_1012225851	3300032261	Soil	LAAPLSGWKQKIVAFGGALGAPGLFLISFLDSSIL
Ga0335073_118022691	3300033134	Soil	LQGGLSGWKQKVVGFAGSLGWPGLFMISFLDSSVLTFPVINDLLLISLSIQRPA
Ga0326724_0053981_1_132	3300034091	Peat Soil	MRAPFSGWKQKIVIFAGALGAPGLFLISFLDSSVLTFPVINDLL
Ga0326724_0103255_1_132	3300034091	Peat Soil	MAAPFSGWKQKIVIFAGALGAPGLFLISFLDSSVLTFPVINDLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040813

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences