NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F040316

Metagenome / Metatranscriptome Family F040316

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F040316
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 63 residues
Representative Sequence MLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV
Number of Associated Samples 112
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.31 %
% of genes near scaffold ends (potentially truncated) 22.22 %
% of genes from short scaffolds (< 2000 bps) 84.57 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(8.025 % of family members)
Environment Ontology (ENVO) Unclassified
(54.938 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(70.988 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 47.31%    β-sheet: 0.00%    Coil/Unstructured: 52.69%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF030614HBT 38.89
PF12695Abhydrolase_5 17.28
PF12146Hydrolase_4 10.49
PF01738DLH 7.41
PF00326Peptidase_S9 5.56
PF13414TPR_11 3.70
PF13432TPR_16 3.09
PF12697Abhydrolase_6 1.23
PF08240ADH_N 1.23
PF00072Response_reg 1.23
PF13620CarboxypepD_reg 0.62
PF01479S4 0.62
PF02738MoCoBD_1 0.62
PF00107ADH_zinc_N 0.62
PF02780Transketolase_C 0.62
PF028725_nucleotid_C 0.62
PF13602ADH_zinc_N_2 0.62
PF16881LIAS_N 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG07372',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase familyDefense mechanisms [V] 0.62

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001464|JGI12363J15224_100128All Organisms → cellular organisms → Bacteria17560Open in IMG/M
3300003203|JGI25406J46586_10108673All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300003267|soilL1_10004211All Organisms → cellular organisms → Bacteria9971Open in IMG/M
3300004114|Ga0062593_102285101All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300004114|Ga0062593_103500625All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300004156|Ga0062589_101234499All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300004643|Ga0062591_101792207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300004798|Ga0058859_11152987All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300005093|Ga0062594_101750262All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005290|Ga0065712_10508231All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300005293|Ga0065715_10251114All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300005294|Ga0065705_10136693All Organisms → cellular organisms → Bacteria2269Open in IMG/M
3300005330|Ga0070690_100490054All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300005331|Ga0070670_100006480All Organisms → cellular organisms → Bacteria9906Open in IMG/M
3300005331|Ga0070670_100006547All Organisms → cellular organisms → Bacteria9866Open in IMG/M
3300005331|Ga0070670_100087243All Organisms → cellular organisms → Bacteria2682Open in IMG/M
3300005331|Ga0070670_100347411All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300005339|Ga0070660_101121519All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300005339|Ga0070660_101300937All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300005341|Ga0070691_10128272All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300005343|Ga0070687_101098364All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300005344|Ga0070661_100957096All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300005345|Ga0070692_10542402All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300005353|Ga0070669_100587758All Organisms → cellular organisms → Bacteria → Acidobacteria932Open in IMG/M
3300005353|Ga0070669_100927582All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300005364|Ga0070673_102228184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300005441|Ga0070700_101346040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300005444|Ga0070694_100347222All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium1148Open in IMG/M
3300005456|Ga0070678_101386227All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300005459|Ga0068867_100731884All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium876Open in IMG/M
3300005539|Ga0068853_100588621All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300005543|Ga0070672_102008583All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300005544|Ga0070686_101431729All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005545|Ga0070695_101079721All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300005546|Ga0070696_101529612All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005547|Ga0070693_100172112All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1388Open in IMG/M
3300005547|Ga0070693_100381089All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300005547|Ga0070693_101481875All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300005563|Ga0068855_100846078All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300005577|Ga0068857_100468281All Organisms → cellular organisms → Bacteria → Acidobacteria1180Open in IMG/M
3300005577|Ga0068857_101816821All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300005578|Ga0068854_100368983All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300005578|Ga0068854_101002241All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300005615|Ga0070702_100277723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1149Open in IMG/M
3300005615|Ga0070702_101164058All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300005617|Ga0068859_101647684All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300005618|Ga0068864_102098434All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005618|Ga0068864_102574257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300005719|Ga0068861_101579716All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300005841|Ga0068863_100329819All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300005844|Ga0068862_100531457All Organisms → cellular organisms → Bacteria → Acidobacteria1120Open in IMG/M
3300005875|Ga0075293_1012501All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300005889|Ga0075290_1024998All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300006169|Ga0082029_1468537All Organisms → cellular organisms → Bacteria → Acidobacteria892Open in IMG/M
3300006237|Ga0097621_100834143All Organisms → cellular organisms → Bacteria → Acidobacteria856Open in IMG/M
3300006755|Ga0079222_10378358All Organisms → cellular organisms → Bacteria → Acidobacteria973Open in IMG/M
3300006755|Ga0079222_10428801All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300006806|Ga0079220_10685982All Organisms → cellular organisms → Bacteria → Acidobacteria749Open in IMG/M
3300006918|Ga0079216_10375739All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300006931|Ga0097620_100765726All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300006954|Ga0079219_10106467All Organisms → cellular organisms → Bacteria → Acidobacteria1392Open in IMG/M
3300009011|Ga0105251_10241382All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes814Open in IMG/M
3300009092|Ga0105250_10226352All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300009093|Ga0105240_10524303All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300009093|Ga0105240_12101160All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300009098|Ga0105245_11063648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium855Open in IMG/M
3300009101|Ga0105247_10656754All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes784Open in IMG/M
3300009101|Ga0105247_10956299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300009148|Ga0105243_10385731All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300009148|Ga0105243_11015856All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300009148|Ga0105243_12297436All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes577Open in IMG/M
3300009174|Ga0105241_10841324All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300009174|Ga0105241_10881395All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300009174|Ga0105241_11529641All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes643Open in IMG/M
3300009545|Ga0105237_10880375All Organisms → cellular organisms → Bacteria → Acidobacteria902Open in IMG/M
3300009545|Ga0105237_11978708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300009551|Ga0105238_10006165All Organisms → cellular organisms → Bacteria11902Open in IMG/M
3300009551|Ga0105238_10370109All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1423Open in IMG/M
3300009551|Ga0105238_10956043All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes877Open in IMG/M
3300009789|Ga0126307_10554861All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes927Open in IMG/M
3300010037|Ga0126304_10395236All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300010037|Ga0126304_10433623All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300010038|Ga0126315_10144021All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1406Open in IMG/M
3300010039|Ga0126309_10272017All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300010039|Ga0126309_11241932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300010040|Ga0126308_10803758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300010042|Ga0126314_10098681All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300010045|Ga0126311_10000019All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes105866Open in IMG/M
3300010045|Ga0126311_10001372All Organisms → cellular organisms → Bacteria11785Open in IMG/M
3300010045|Ga0126311_10002189All Organisms → cellular organisms → Bacteria9711Open in IMG/M
3300010045|Ga0126311_10513508All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300010047|Ga0126382_10845769All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300010371|Ga0134125_11280919All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300010375|Ga0105239_11912350All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300010397|Ga0134124_10108216All Organisms → cellular organisms → Bacteria2428Open in IMG/M
3300010399|Ga0134127_10053557All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes3352Open in IMG/M
3300010399|Ga0134127_10412899All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1338Open in IMG/M
3300010399|Ga0134127_10560444All Organisms → cellular organisms → Bacteria → Acidobacteria1165Open in IMG/M
3300010399|Ga0134127_10770866All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1008Open in IMG/M
3300010399|Ga0134127_11137897All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300010400|Ga0134122_10294652All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300010400|Ga0134122_11119846All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300010401|Ga0134121_10009787All Organisms → cellular organisms → Bacteria7618Open in IMG/M
3300010401|Ga0134121_10017414All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes5726Open in IMG/M
3300010401|Ga0134121_12489748All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300011119|Ga0105246_10675240All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300011119|Ga0105246_10957247All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300012986|Ga0164304_11068383All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300013100|Ga0157373_10227074All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1318Open in IMG/M
3300013100|Ga0157373_11091242All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300013100|Ga0157373_11256821All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300013102|Ga0157371_11065395All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300013296|Ga0157374_11921855All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300013296|Ga0157374_12431532All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300013306|Ga0163162_10234317All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1967Open in IMG/M
3300014325|Ga0163163_10004963All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia11453Open in IMG/M
3300014325|Ga0163163_10433307All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1374Open in IMG/M
3300014325|Ga0163163_12275019All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300014325|Ga0163163_12396189All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300014745|Ga0157377_10480455All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300015262|Ga0182007_10179006All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes732Open in IMG/M
3300017792|Ga0163161_11104088All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300018476|Ga0190274_10091586All Organisms → cellular organisms → Bacteria2383Open in IMG/M
3300025900|Ga0207710_10003160All Organisms → cellular organisms → Bacteria7374Open in IMG/M
3300025904|Ga0207647_10762745All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300025904|Ga0207647_10795240All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300025911|Ga0207654_10724732All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium715Open in IMG/M
3300025918|Ga0207662_10548274All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300025918|Ga0207662_10718663All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes701Open in IMG/M
3300025919|Ga0207657_11078115All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes614Open in IMG/M
3300025923|Ga0207681_10017565All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes4494Open in IMG/M
3300025924|Ga0207694_10010025All Organisms → cellular organisms → Bacteria7140Open in IMG/M
3300025925|Ga0207650_10000001All Organisms → cellular organisms → Bacteria → Acidobacteria1545726Open in IMG/M
3300025925|Ga0207650_10026900All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes4110Open in IMG/M
3300025925|Ga0207650_10300788All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1310Open in IMG/M
3300025930|Ga0207701_10418713All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1152Open in IMG/M
3300025931|Ga0207644_10255766All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1399Open in IMG/M
3300025932|Ga0207690_11526388All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300025933|Ga0207706_11223906All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300025935|Ga0207709_11522043All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300025940|Ga0207691_10125042All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia2276Open in IMG/M
3300025945|Ga0207679_10715070All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300025945|Ga0207679_11460092All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300025945|Ga0207679_11620953All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300025981|Ga0207640_10523670All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes991Open in IMG/M
3300026005|Ga0208285_1010298All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes702Open in IMG/M
3300026075|Ga0207708_10000126All Organisms → cellular organisms → Bacteria59505Open in IMG/M
3300026075|Ga0207708_10136235All Organisms → cellular organisms → Bacteria1923Open in IMG/M
3300026088|Ga0207641_11270859All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300026088|Ga0207641_12175447All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300026089|Ga0207648_10756178All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300026095|Ga0207676_10971533All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300026116|Ga0207674_10370896All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1383Open in IMG/M
3300026142|Ga0207698_12592197All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300027514|Ga0208338_1000073All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes37817Open in IMG/M
3300027718|Ga0209795_10054258All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300027775|Ga0209177_10311862All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300028380|Ga0268265_10800218All Organisms → cellular organisms → Bacteria → Acidobacteria919Open in IMG/M
3300028380|Ga0268265_11796797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium619Open in IMG/M
3300028381|Ga0268264_10041948All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes3786Open in IMG/M
3300031548|Ga0307408_100254656All Organisms → cellular organisms → Bacteria1450Open in IMG/M
3300032075|Ga0310890_11783229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.02%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere8.02%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere8.02%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil7.41%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil7.41%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.41%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.32%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.09%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.09%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.09%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere2.47%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.47%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.23%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.62%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.62%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.62%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.62%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.62%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.62%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.62%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.62%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001464Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91EnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005875Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026005Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027514Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91 (SPAdes)EnvironmentalOpen in IMG/M
3300027718Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12363J15224_100128103300001464SoilMLLMTLLQENATSSFDDLGKLLLGGMAAAIVVAVGFVVIQFRMRDKKPSTSNFISITDKDPSSSV*
JGI25406J46586_1010867323300003203Tabebuia Heterophylla RhizosphereMLLMELLQENVTSGFDDLGKLLFGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPSSSV*
soilL1_10004211143300003267Sugarcane Root And Bulk SoilMVLMTLIQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISISSEKD*
Ga0062593_10228510123300004114SoilMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPSSSV*
Ga0062593_10350062513300004114SoilMILMALLQENATSSFDDLGKLLLYGVAAAIVVAVGFTVVRFRMRDKKPPTSNFISI
Ga0062589_10123449913300004156SoilLQENATSSFDDLGKLLVYGVAAAIVLAVGFTVIRFRMRDKKPPTSSFISINSEKQ*
Ga0062591_10179220723300004643SoilRSCQMLLMELLQENATSSFDDLGKLLVYGVAAAIVLAVGFTVIRFRMRDKKPPTSSFISINSEKQ*
Ga0058859_1115298713300004798Host-AssociatedQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQASKFISITEKDPSSSV*
Ga0062594_10175026213300005093SoilMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0065712_1050823123300005290Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQASKFISITEKDPSSSV*
Ga0065715_1025111433300005293Miscanthus RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVVIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0065705_1013669323300005294Switchgrass RhizosphereMLLMTLLQENATSSFDDLGKLLLGGMAAAIVVAVGFVVIQFRMRDKKPPTSSFISISSEKE*
Ga0070690_10049005413300005330Switchgrass RhizosphereTLLQENATTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISITDKDPSSSV*
Ga0070670_10000648033300005331Switchgrass RhizosphereMLLIELLQENATSSFDDLGKLLLGGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISISSEKE*
Ga0070670_100006547143300005331Switchgrass RhizosphereLLQENVATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0070670_10008724343300005331Switchgrass RhizosphereMVLMTLIQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASNFISISSEKE*
Ga0070670_10034741113300005331Switchgrass RhizosphereEMVLMTLIQENVTSSFDDLGKLLLYGVSAAIVLAVGFTVVRFRMRDKKPPASKFISITDKDPSSSV*
Ga0070660_10112151923300005339Corn RhizosphereMVLMTLIQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPASKFISITDKDPSSSV*
Ga0070660_10130093713300005339Corn RhizosphereMLLMTLIQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISINSEKQ*
Ga0070691_1012827223300005341Corn, Switchgrass And Miscanthus RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSSV*
Ga0070687_10109836413300005343Switchgrass RhizosphereMVLMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSNFISISSEKD*
Ga0070661_10095709623300005344Corn RhizosphereMLLMMLIQENATGSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISINSEKQ*
Ga0070692_1054240223300005345Corn, Switchgrass And Miscanthus RhizosphereMLLMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASNFISITDKDPSSSV*
Ga0070669_10058775813300005353Switchgrass RhizosphereMLLMTLLQENATTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0070669_10092758213300005353Switchgrass RhizosphereMLLMTLLQENSATSSFDDLGKLLLYGVAAAIVVAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV*
Ga0070673_10222818413300005364Switchgrass RhizosphereMLLMELLQENATSSFDDLGKLLLGGMAAAIVVAVGFVLVQFRMRDKKPPTSSFISINSEKQ*
Ga0070700_10134604013300005441Corn, Switchgrass And Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPQTSKFISITDKDPSSSV*
Ga0070694_10034722213300005444Corn, Switchgrass And Miscanthus RhizosphereMVLMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSS
Ga0070678_10138622723300005456Miscanthus RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSTV*
Ga0068867_10073188433300005459Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPSSS
Ga0068853_10058862123300005539Corn RhizosphereMVLMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV*
Ga0070672_10200858323300005543Miscanthus RhizosphereMLLMMLIQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0070686_10143172923300005544Switchgrass RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITD
Ga0070695_10107972123300005545Corn, Switchgrass And Miscanthus RhizosphereMLLMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV*
Ga0070696_10152961223300005546Corn, Switchgrass And Miscanthus RhizosphereMLLMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0070693_10017211213300005547Corn, Switchgrass And Miscanthus RhizosphereMLLMTLLQENTATSSFDDLGKLLLYGVAAAIVVAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV*
Ga0070693_10038108923300005547Corn, Switchgrass And Miscanthus RhizosphereMFLMELLQENATSSFDDLGKLLLYGVATAIVVAVGFTVVRFRMRDKKPPTSNFISISSEKQ*
Ga0070693_10148187513300005547Corn, Switchgrass And Miscanthus RhizosphereMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0068855_10084607813300005563Corn RhizosphereMLLMELLQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFGMRDKKPPTSPFISITDKDPSSSV*
Ga0068857_10046828113300005577Corn RhizosphereMVLMTLIQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISITDKDPSSSV*
Ga0068857_10181682113300005577Corn RhizosphereMLLMTLLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0068854_10036898313300005578Corn RhizosphereMLLMELLQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV*
Ga0068854_10100224123300005578Corn RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSPV*
Ga0070702_10027772323300005615Corn, Switchgrass And Miscanthus RhizosphereMVLMTLIQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV*
Ga0070702_10116405823300005615Corn, Switchgrass And Miscanthus RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDP
Ga0068859_10164768423300005617Switchgrass RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0068864_10209843423300005618Switchgrass RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFWMRDKKPPTSNFISINSEKQ*
Ga0068864_10257425723300005618Switchgrass RhizosphereMVLMTLIEQNVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPASKFISITDKDPSSSV*
Ga0068861_10157971623300005719Switchgrass RhizosphereMLLMTLLQENATTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISITDKDPSSSV*
Ga0068863_10032981923300005841Switchgrass RhizosphereMLLMTLLQENATSSFDDLGKLLLGGEAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSPV*
Ga0068862_10053145713300005844Switchgrass RhizosphereMLLMTLLQENAATSSFDDLGKLLLGGVTAAIVVAVGFVVIQFRMRDKKPPASKFISITGKDPSSSV*
Ga0075293_101250123300005875Rice Paddy SoilMLLMELLQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSSFISINSEKQ*
Ga0075290_102499823300005889Rice Paddy SoilMLLMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISISSKEK*
Ga0082029_146853723300006169Termite NestMLLMTLIQETATSSFDDLGKLLLYGVAGAIVVAVGFTVVRFRMRDKKPPTSNFISITDKDPSSSV*
Ga0097621_10083414323300006237Miscanthus RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASRFISITDKDPSSPV*
Ga0079222_1037835823300006755Agricultural SoilMLLMELLQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV*
Ga0079222_1042880113300006755Agricultural SoilMLLMELLQENATSSFDDLGKLLLGGVTTAIVVAVGFVLIQFRMRDKKPPTSYFISITDKDPSSSV*
Ga0079220_1068598223300006806Agricultural SoilMLLMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISISSEEK*
Ga0079216_1037573913300006918Agricultural SoilLLQETVDTTATTAFDDLGKLLLGGVVVAIVVAVGFTLVRFRMQDKKPRTSNFISISSPQESRHK*
Ga0097620_10076572623300006931Switchgrass RhizosphereMVLMILLQENSGNFDDLGKLLLGGVLAAIVVAVGFTLVRFRLRDRKPETSRFISISSEKE
Ga0079219_1010646723300006954Agricultural SoilMLLMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0105251_1024138223300009011Switchgrass RhizosphereMTLLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0105250_1022635223300009092Switchgrass RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVVIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0105240_1052430313300009093Corn RhizosphereTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV*
Ga0105240_1210116023300009093Corn RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISINSEKQ*
Ga0105245_1106364823300009098Miscanthus RhizosphereMTLIQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV*
Ga0105247_1065675423300009101Switchgrass RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSTV*
Ga0105247_1095629923300009101Switchgrass RhizosphereMELLQENATSSFDDLGKLLLYGVAAAIVVAVGFVLVQFRMRDKKPPTSKFISITDKDPSSSV*
Ga0105243_1038573113300009148Miscanthus RhizosphereSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKNPPASKFISITDKDPSSSV*
Ga0105243_1101585623300009148Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSNFISISSEKQ*
Ga0105243_1229743623300009148Miscanthus RhizosphereMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPSSSV*
Ga0105241_1084132423300009174Corn RhizosphereMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV*
Ga0105241_1088139513300009174Corn RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVVIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0105241_1152964123300009174Corn RhizosphereMLLLMLSQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPASKFISITDKDPSSSV*
Ga0105237_1088037513300009545Corn RhizosphereMELLQENATSGFEDLGKLLLGGMAAAIVVAVGFVLIQFRMRDKKPPTSGFISINSEKQ*
Ga0105237_1197870813300009545Corn RhizosphereMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSNFISINSEKE*
Ga0105238_10006165153300009551Corn RhizosphereMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASNFISITDKDPSSSV*
Ga0105238_1037010923300009551Corn RhizosphereMLLMELIQENATSGFDDLGKLLFGGVAAAIVVAVGFVLVQFRMRDKKPPTSKFISITDKDPSSSV*
Ga0105238_1095604323300009551Corn RhizosphereMELLQENATSGFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSSFISINSEKQ*
Ga0126307_1055486123300009789Serpentine SoilMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPSSGFISINSDKQ*
Ga0126304_1039523613300010037Serpentine SoilMLLMELLQENVTGSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPSSGFISINSDKQ*
Ga0126304_1043362333300010037Serpentine SoilMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPSSGFISINSDKQ*
Ga0126315_1014402113300010038Serpentine SoilMLLLTLLQENATSGFDDLGKLLFGGVAAAIVVAVGFVVIQFRMRDKKPPKSNFISITGKDPSSSV*
Ga0126309_1027201713300010039Serpentine SoilNSLALISLLQENTTGAFDDLGTLLVGGVAAAIVLAVAFTLMRFRLRDKKPPTSNFISISSATEKE*
Ga0126309_1124193213300010039Serpentine SoilMVLMILIQENATTSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISIRDKDSSSSV*
Ga0126308_1080375813300010040Serpentine SoilMELLQENVTGSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPSSGFISINSDKQ*
Ga0126314_1009868133300010042Serpentine SoilMLLLTLLQENATTSSFDDLGKLLFGGVAAAIVVAVGFVVIQFRMRDKKPPKSNFISITGKDPSSSV*
Ga0126311_10000019773300010045Serpentine SoilMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPPSNFISITDKDPSSSV*
Ga0126311_1000137253300010045Serpentine SoilMELLQENATSSFDDLGKLLLGGMAAAIVVAVGFVVVQFRMRDKKPPTSRFISISSEKE*
Ga0126311_1000218953300010045Serpentine SoilMVLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISISSEKD*
Ga0126311_1051350813300010045Serpentine SoilMLFFLLCVNLFALINLIQEEAGTFDDLGKLLLGGVAAAIVVAVAFTLIRFRLRDKNPQTSNFISISSDKQ*
Ga0126382_1084576923300010047Tropical Forest SoilMLLMELFQENATSGFDDLGKLLLYGVAAAIVVAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV*
Ga0134125_1128091923300010371Terrestrial SoilMLLMTLIQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISISSEKE*
Ga0105239_1191235023300010375Corn RhizosphereMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVVIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0134124_1010821633300010397Terrestrial SoilMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0134127_1005355733300010399Terrestrial SoilMVLLALLQENATSSFDDLGKLLLYGVTAAIVVAVGFTLVRFRMRDKKPPTSNFISISSEKE*
Ga0134127_1041289933300010399Terrestrial SoilMLLMELLQENVTSGFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSNFISISSEKQ*
Ga0134127_1056044423300010399Terrestrial SoilMLLLIYVLQENAAQFDDLGKLLLGGVAAAIVVAVGFTLVRFRLRYKKPETSNFISISSEKD*
Ga0134127_1077086623300010399Terrestrial SoilMELLQENATSSFDDLGTLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISINSEKQ*
Ga0134127_1113789723300010399Terrestrial SoilMLLMTLIQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSGFISITDKDPSSSV*
Ga0134122_1029465223300010400Terrestrial SoilMTLIQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPTSRFISITDKDPSSSV*
Ga0134122_1111984623300010400Terrestrial SoilMLLMTLLQENATSSFDDLGKLLLYGVAAAIVVAVGFTVVRFRMRDKKPPASNFISITDKD
Ga0134121_1000978753300010401Terrestrial SoilMLLMELLQENATSGFEDLGKLLFGGMAAAIVVAVGFVLIQFRMRDKKPPTSKFISITDKDPSSSV*
Ga0134121_1001741433300010401Terrestrial SoilMLLMELLQENATSSFDDLGKLLLWGVATAIVVAIGFTVVRFRMRDKKPPTSNFISISSEKE*
Ga0134121_1248974823300010401Terrestrial SoilMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSGFISINSEKQ*
Ga0105246_1067524023300011119Miscanthus RhizosphereMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV*
Ga0105246_1095724713300011119Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSNFISINSEKQ*
Ga0164304_1106838323300012986SoilMLLMELLQENATSSFDDLGTLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNF
Ga0157373_1022707423300013100Corn RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISINSEKQ*
Ga0157373_1109124223300013100Corn RhizosphereMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISITDKDPSSSV*
Ga0157373_1125682123300013100Corn RhizosphereMLLLMLSQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISISSEKE*
Ga0157371_1106539523300013102Corn RhizosphereMTLLQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSS
Ga0157374_1192185513300013296Miscanthus RhizosphereAATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0157374_1243153223300013296Miscanthus RhizosphereMTLLQENATSSFDDLGKLLLGGEAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSPV*
Ga0163162_1023431723300013306Switchgrass RhizosphereMTLLQENATSSFDDLGKLLLGGVATAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV*
Ga0163163_10004963123300014325Switchgrass RhizosphereMLLMTLLQENVATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV*
Ga0163163_1043330733300014325Switchgrass RhizosphereMTLIQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPASKFISITDKDPSSSV*
Ga0163163_1227501913300014325Switchgrass RhizosphereMILMALLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFI
Ga0163163_1239618923300014325Switchgrass RhizosphereMLLMMLIQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISINSEKQ*
Ga0157377_1048045513300014745Miscanthus RhizosphereMTLLQENAATSSFDDLGKLLLGGVTAAIVVAVGFVVIQFRMRDKNPPASKFISITGKAPSSSV*
Ga0182007_1017900623300015262RhizosphereMLLMELIQENATSGFEDLGKLLLGGMAAAIVVAVGFVLVQFRMRDKKPPTSNFISITSEKE*
Ga0163161_1110408823300017792Switchgrass RhizosphereMLLMTLLQENTATSSFDDLGKLLLYGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISITDKDPSSSV
Ga0190274_1009158643300018476SoilMLLMELLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSSFISITDKDPSSSV
Ga0207710_1000316033300025900Switchgrass RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV
Ga0207647_1076274523300025904Corn RhizospherePPERSYQMVLMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV
Ga0207647_1079524023300025904Corn RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPSSSV
Ga0207654_1072473223300025911Corn RhizosphereMLLLMLSQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPASKFISITDKDPSSSV
Ga0207662_1054827423300025918Switchgrass RhizosphereMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSNFISISSEKD
Ga0207662_1071866323300025918Switchgrass RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSNFISINSEK
Ga0207657_1107811523300025919Corn RhizosphereMLLMTLLQENATSSFDDLGKLLLGGMAAAIVVAVGFVLVQFRMRDKKPPTSSFISINSEK
Ga0207681_1001756553300025923Switchgrass RhizosphereMLLMTLLQENSATSSFDDLGKLLLYGVAAAIVVAVGFTVVRFRMQDKKPPTSKFISITDKDPSSSV
Ga0207694_1001002523300025924Corn RhizosphereMLLMTLLQENAATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASNFISITDKDPSSSV
Ga0207650_10000001573300025925Switchgrass RhizosphereMLLMTLLQENVATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV
Ga0207650_1002690053300025925Switchgrass RhizosphereMLLIELLQENATSSFDDLGKLLLGGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISISSEK
Ga0207650_1030078823300025925Switchgrass RhizosphereMTLIQENVTSSFDDLGKLLLYGVSAAIVLAVGFTVVRFRMRDKKPPASKFISITDKDPSSSV
Ga0207701_1041871323300025930Corn, Switchgrass And Miscanthus RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVVIQFRMRDKKPPASKFISITDKDPSSSV
Ga0207644_1025576633300025931Switchgrass RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVIIQFRMRDKKPPASRFISITDKDPSSTV
Ga0207690_1152638813300025932Corn RhizosphereMELLQENATSSFDDLGKLLLGGMAAAIVVAVGFVLVQFRMRDKKPPTSSFISINS
Ga0207706_1122390613300025933Corn RhizosphereMLLLMLSQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSN
Ga0207709_1152204323300025935Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPPTSNFISISSEK
Ga0207691_1012504243300025940Miscanthus RhizosphereMLLMMLIQENATSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPSSSV
Ga0207679_1071507023300025945Corn RhizosphereMLLMMLIQENATGSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISINSEK
Ga0207679_1146009213300025945Corn RhizosphereMVLMTLIQENVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMQDKKPPASKFISITDKDPSSSV
Ga0207679_1162095323300025945Corn RhizosphereMTLIEQNVTSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSNFISITDKDPSSSV
Ga0207640_1052367023300025981Corn RhizosphereMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASRFISITDKDPSSPV
Ga0208285_101029823300026005Rice Paddy SoilMLLMELLQENATSSFDDLGKLLLYGVAAAIVLAVGFTVVRFRMRDKKPPTSSFISINSEK
Ga0207708_10000126183300026075Corn, Switchgrass And Miscanthus RhizosphereMVLMNLLQENAGNFDDLGKLLLGGVVAAIVVAVGFTLIRFRWRDKKPQTSSFISISSDKD
Ga0207708_1013623543300026075Corn, Switchgrass And Miscanthus RhizosphereMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV
Ga0207641_1127085923300026088Switchgrass RhizosphereMVLMTLIQENATSSFDDLGKLLLYGVAAAIVVAVGFTVLRFRMRDKKPPTSPFISITDKDPSSSV
Ga0207641_1217544713300026088Switchgrass RhizosphereMLLMELLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISI
Ga0207648_1075617813300026089Miscanthus RhizosphereMLLMELLQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLVQFRMRDKKPQTSKFISITDKDPS
Ga0207676_1097153313300026095Switchgrass RhizosphereEMLLMTLLQENATSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV
Ga0207674_1037089623300026116Corn RhizosphereMLLMTLLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV
Ga0207698_1259219713300026142Corn RhizosphereMTLLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDK
Ga0208338_1000073263300027514SoilMLLMTLLQENATSSFDDLGKLLLGGMAAAIVVAVGFVVIQFRMRDKKPSTSNFISITDKDPSSSV
Ga0209795_1005425823300027718AgaveMVLMELLQENVTSSFDDLGTLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSGFISINSDK
Ga0209177_1031186223300027775Agricultural SoilTPRSQTDLPERSCQMLLMELLQENATSSFDDLGKLLLGGVATAIVVAVGFVLIQFRMRDKKPPTSNFISITDKDPSSSV
Ga0268265_1080021833300028380Switchgrass RhizosphereMLLMELLQENATSGFEDLGKLLLGGMAAAIVVAVGFVLIQFRMRDKKPPTSGFISINSEK
Ga0268265_1179679723300028380Switchgrass RhizosphereMLLMTLLQENAATSSFDDLGKLLLGGVTAAIVVAVGFVVIQFRMRDKKPPASKFISITGKDPSSSV
Ga0268264_1004194853300028381Switchgrass RhizosphereMLLMTLLQENATTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPTSSFISITDKDPSSSV
Ga0307408_10025465623300031548RhizosphereMVLMTLIQENVTSSFDDLGKLLLGGVAAAIVVAVGFVLIQFRMRDKKPPASNFISISSEK
Ga0310890_1178322923300032075SoilLMTLLQENATSGFDDLGKLLFGGVAAAIVVAVGFVLIQFRMRDKKPPASKFISITDKDPSSSV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.