Metagenome / Metatranscriptome Family F039698

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039698
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	51 residues
Representative Sequence	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Number of Associated Samples	118
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.99 %
% of genes near scaffold ends (potentially truncated)	36.81 %
% of genes from short scaffolds (< 2000 bps)	83.44 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.847 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.356 % of family members)
Environment Ontology (ENVO)	Unclassified (34.969 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.877 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.23% β-sheet: 0.00% Coil/Unstructured: 30.77%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00344	SecY	2.45
PF00741	Gas_vesicle	1.23
PF07885	Ion_trans_2	1.23
PF01595	CNNM	1.23
PF02517	Rce1-like	1.23
PF00487	FA_desaturase	1.23
PF03069	FmdA_AmdA	0.61
PF00561	Abhydrolase_1	0.61
PF07987	DUF1775	0.61
PF03354	TerL_ATPase	0.61
PF12762	DDE_Tnp_IS1595	0.61
PF11716	MDMPI_N	0.61
PF00391	PEP-utilizers	0.61
PF12697	Abhydrolase_6	0.61
PF01544	CorA	0.61
PF01545	Cation_efflux	0.61
PF01814	Hemerythrin	0.61
PF00005	ABC_tran	0.61
PF01694	Rhomboid	0.61
PF01243	Putative_PNPOx	0.61
PF13011	LZ_Tnp_IS481	0.61
PF07411	DUF1508	0.61
PF13472	Lipase_GDSL_2	0.61
PF00571	CBS	0.61
PF04343	DUF488	0.61
PF14417	MEDS	0.61
PF06441	EHN	0.61
PF02426	MIase	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0201	Preprotein translocase subunit SecY	Intracellular trafficking, secretion, and vesicular transport [U]	2.45
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.23
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.23
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.23
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.23
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.61
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.61
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.61
COG4549	Uncharacterized conserved protein YcnI, contains cohesin/reeler-like domain	Function unknown [S]	0.61
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.61
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	0.61
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.61
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.61
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.61
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.61
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
All Organisms	root	All Organisms	25.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
cellular organisms	root	All Organisms → cellular organisms	25.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.02 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5.52 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.61 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.61 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.61 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.61 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.61 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.61 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.61 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2.45 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.84 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.23 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.61 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.61 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.61 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.61 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.61 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.84 %
Cutibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium	1.23 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	1.23 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.61 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.61 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.61 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.61 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.61 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.61 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Cutibacterium acnes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium → Cutibacterium acnes	1.23 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1.23 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	1.23 %
Actinospica durhamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	0.61 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.61 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.61 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	0.61 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.61 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.61 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.85 %
Cutibacterium acnes JCM 18918	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium → Cutibacterium acnes → Cutibacterium acnes JCM 18918	1.23 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1.23 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	1.23 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.61 %
Blastococcus sp. DSM 44272	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44272	0.61 %
Actinospica durhamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	0.61 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.61 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.61 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.61 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig111451	Not Available	617	Open in IMG/M
3300000559\|F14TC_102988852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	554	Open in IMG/M
3300001431\|F14TB_100143530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1634	Open in IMG/M
3300002568\|C688J35102_120988749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9230	Open in IMG/M
3300004156\|Ga0062589_102624565	Not Available	523	Open in IMG/M
3300005168\|Ga0066809_10243329	Not Available	500	Open in IMG/M
3300005616\|Ga0068852_102098520	Not Available	587	Open in IMG/M
3300006058\|Ga0075432_10001244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8211	Open in IMG/M
3300006058\|Ga0075432_10009693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3280	Open in IMG/M
3300006196\|Ga0075422_10015668	Not Available	2527	Open in IMG/M
3300006853\|Ga0075420_101396405	Not Available	601	Open in IMG/M
3300006871\|Ga0075434_101127042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	797	Open in IMG/M
3300006881\|Ga0068865_100429810	Not Available	1088	Open in IMG/M
3300006903\|Ga0075426_10031636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3784	Open in IMG/M
3300009094\|Ga0111539_10389602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	1623	Open in IMG/M
3300009098\|Ga0105245_12516313	Not Available	568	Open in IMG/M
3300009100\|Ga0075418_11499991	Not Available	732	Open in IMG/M
3300009146\|Ga0105091_10076449	Not Available	1512	Open in IMG/M
3300009148\|Ga0105243_10580295	Not Available	1076	Open in IMG/M
3300009553\|Ga0105249_11306902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300009553\|Ga0105249_12063934	Not Available	643	Open in IMG/M
3300009789\|Ga0126307_10046927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3369	Open in IMG/M
3300009789\|Ga0126307_10094330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44272	2367	Open in IMG/M
3300009789\|Ga0126307_10372145	Not Available	1151	Open in IMG/M
3300009840\|Ga0126313_10069041	Not Available	2536	Open in IMG/M
3300009840\|Ga0126313_10414460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1070	Open in IMG/M
3300009840\|Ga0126313_10925553	Not Available	712	Open in IMG/M
3300009840\|Ga0126313_11405184	Not Available	578	Open in IMG/M
3300010036\|Ga0126305_10068244	Not Available	2067	Open in IMG/M
3300010036\|Ga0126305_10206491	Not Available	1248	Open in IMG/M
3300010036\|Ga0126305_10217969	Not Available	1216	Open in IMG/M
3300010037\|Ga0126304_10216009	Not Available	1256	Open in IMG/M
3300010040\|Ga0126308_10156160	Not Available	1444	Open in IMG/M
3300010040\|Ga0126308_10635405	Not Available	730	Open in IMG/M
3300010041\|Ga0126312_10032613	All Organisms → cellular organisms → Bacteria	3478	Open in IMG/M
3300010042\|Ga0126314_10401233	Not Available	988	Open in IMG/M
3300010042\|Ga0126314_10447051	Not Available	934	Open in IMG/M
3300010042\|Ga0126314_10590917	Not Available	810	Open in IMG/M
3300010044\|Ga0126310_11150471	Not Available	620	Open in IMG/M
3300010044\|Ga0126310_11201299	Not Available	609	Open in IMG/M
3300010045\|Ga0126311_10555366	Not Available	904	Open in IMG/M
3300010045\|Ga0126311_11328984	Not Available	598	Open in IMG/M
3300010166\|Ga0126306_10427143	Not Available	1039	Open in IMG/M
3300010166\|Ga0126306_10626555	Not Available	858	Open in IMG/M
3300010999\|Ga0138505_100007079	Not Available	1212	Open in IMG/M
3300010999\|Ga0138505_100062980	Not Available	544	Open in IMG/M
3300012208\|Ga0137376_10934556	Not Available	744	Open in IMG/M
3300012212\|Ga0150985_118643357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	4597	Open in IMG/M
3300012469\|Ga0150984_117177889	Not Available	756	Open in IMG/M
3300012494\|Ga0157341_1011357	Not Available	770	Open in IMG/M
3300012938\|Ga0162651_100064108	Not Available	597	Open in IMG/M
3300013096\|Ga0157307_1180642	Not Available	511	Open in IMG/M
3300013306\|Ga0163162_10894098	Not Available	1002	Open in IMG/M
3300013307\|Ga0157372_11487787	Not Available	780	Open in IMG/M
3300014326\|Ga0157380_10783524	Not Available	969	Open in IMG/M
3300014497\|Ga0182008_10518781	Not Available	658	Open in IMG/M
3300015371\|Ga0132258_11837777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1526	Open in IMG/M
3300015371\|Ga0132258_12645504	Not Available	1253	Open in IMG/M
3300015372\|Ga0132256_100760047	Not Available	1085	Open in IMG/M
3300015373\|Ga0132257_102063357	Not Available	736	Open in IMG/M
3300017792\|Ga0163161_10095701	Not Available	2203	Open in IMG/M
3300017965\|Ga0190266_11209727	Not Available	524	Open in IMG/M
3300018000\|Ga0184604_10020693	Not Available	1554	Open in IMG/M
3300018027\|Ga0184605_10409756	Not Available	604	Open in IMG/M
3300018028\|Ga0184608_10340975	Not Available	658	Open in IMG/M
3300018031\|Ga0184634_10190875	Not Available	931	Open in IMG/M
3300018054\|Ga0184621_10011398	Not Available	2582	Open in IMG/M
3300018066\|Ga0184617_1158701	Not Available	666	Open in IMG/M
3300018067\|Ga0184611_1002342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	4364	Open in IMG/M
3300018075\|Ga0184632_10348219	Not Available	634	Open in IMG/M
3300018077\|Ga0184633_10159699	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300018078\|Ga0184612_10287365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300018465\|Ga0190269_10353550	Not Available	885	Open in IMG/M
3300018465\|Ga0190269_11111119	Not Available	611	Open in IMG/M
3300018466\|Ga0190268_10873643	Not Available	694	Open in IMG/M
3300018466\|Ga0190268_11050694	Not Available	656	Open in IMG/M
3300019269\|Ga0184644_1053496	Not Available	614	Open in IMG/M
3300019269\|Ga0184644_1685843	Not Available	545	Open in IMG/M
3300019767\|Ga0190267_10319384	Not Available	817	Open in IMG/M
3300019767\|Ga0190267_10670417	Not Available	660	Open in IMG/M
3300019867\|Ga0193704_1030519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium → Cutibacterium acnes → Cutibacterium acnes JCM 18918	1088	Open in IMG/M
3300019876\|Ga0193703_1008494	Not Available	1525	Open in IMG/M
3300019876\|Ga0193703_1071364	Not Available	514	Open in IMG/M
3300021078\|Ga0210381_10009614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2306	Open in IMG/M
3300021080\|Ga0210382_10442382	Not Available	576	Open in IMG/M
3300022534\|Ga0224452_1005042	Not Available	3205	Open in IMG/M
3300022694\|Ga0222623_10106299	Not Available	1092	Open in IMG/M
3300022694\|Ga0222623_10255258	Not Available	676	Open in IMG/M
3300022756\|Ga0222622_10430246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300025935\|Ga0207709_10510198	Not Available	940	Open in IMG/M
3300025938\|Ga0207704_10221483	Not Available	1400	Open in IMG/M
3300025942\|Ga0207689_10919931	Not Available	738	Open in IMG/M
3300025961\|Ga0207712_11130897	Not Available	698	Open in IMG/M
3300026118\|Ga0207675_100169607	Not Available	2086	Open in IMG/M
3300027907\|Ga0207428_10015849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6504	Open in IMG/M
3300028381\|Ga0268264_12463288	Not Available	526	Open in IMG/M
3300028453\|Ga0307246_1130708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300028704\|Ga0307321_1006201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1987	Open in IMG/M
3300028704\|Ga0307321_1042705	Not Available	847	Open in IMG/M
3300028708\|Ga0307295_10085099	Not Available	842	Open in IMG/M
3300028708\|Ga0307295_10126433	Not Available	700	Open in IMG/M
3300028708\|Ga0307295_10144122	Not Available	659	Open in IMG/M
3300028709\|Ga0307279_10031758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300028711\|Ga0307293_10208661	Not Available	622	Open in IMG/M
3300028715\|Ga0307313_10039058	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300028715\|Ga0307313_10270085	Not Available	529	Open in IMG/M
3300028717\|Ga0307298_10005858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2971	Open in IMG/M
3300028719\|Ga0307301_10113286	Not Available	864	Open in IMG/M
3300028720\|Ga0307317_10332550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium → Cutibacterium acnes → Cutibacterium acnes JCM 18918	513	Open in IMG/M
3300028722\|Ga0307319_10191883	Not Available	667	Open in IMG/M
3300028771\|Ga0307320_10112828	Not Available	1038	Open in IMG/M
3300028784\|Ga0307282_10144174	Not Available	1125	Open in IMG/M
3300028787\|Ga0307323_10010372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3115	Open in IMG/M
3300028787\|Ga0307323_10122977	Not Available	934	Open in IMG/M
3300028787\|Ga0307323_10280906	Not Available	599	Open in IMG/M
3300028787\|Ga0307323_10367402	Not Available	515	Open in IMG/M
3300028791\|Ga0307290_10019090	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300028799\|Ga0307284_10047723	Not Available	1495	Open in IMG/M
3300028807\|Ga0307305_10127072	Not Available	1178	Open in IMG/M
3300028810\|Ga0307294_10184181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300028814\|Ga0307302_10085329	Not Available	1498	Open in IMG/M
3300028814\|Ga0307302_10259140	Not Available	852	Open in IMG/M
3300028814\|Ga0307302_10510729	Not Available	597	Open in IMG/M
3300028819\|Ga0307296_10543920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300028819\|Ga0307296_10680577	Not Available	562	Open in IMG/M
3300028819\|Ga0307296_10729218	Not Available	541	Open in IMG/M
3300028872\|Ga0307314_10004747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2841	Open in IMG/M
3300028875\|Ga0307289_10067107	Not Available	1446	Open in IMG/M
3300028878\|Ga0307278_10476095	Not Available	546	Open in IMG/M
3300028881\|Ga0307277_10082658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	1346	Open in IMG/M
3300028881\|Ga0307277_10424478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	595	Open in IMG/M
3300030829\|Ga0308203_1006394	Not Available	1248	Open in IMG/M
3300030903\|Ga0308206_1032169	Not Available	959	Open in IMG/M
3300030905\|Ga0308200_1063517	Not Available	718	Open in IMG/M
3300030987\|Ga0308155_1032131	Not Available	529	Open in IMG/M
3300031092\|Ga0308204_10111573	Not Available	768	Open in IMG/M
3300031092\|Ga0308204_10158701	Not Available	677	Open in IMG/M
3300031096\|Ga0308193_1005296	Not Available	1335	Open in IMG/M
3300031099\|Ga0308181_1072297	Not Available	699	Open in IMG/M
3300031114\|Ga0308187_10395503	Not Available	544	Open in IMG/M
3300031421\|Ga0308194_10188957	Not Available	660	Open in IMG/M
3300031547\|Ga0310887_11149129	Not Available	500	Open in IMG/M
3300031548\|Ga0307408_100021827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4339	Open in IMG/M
3300031548\|Ga0307408_100370434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	1221	Open in IMG/M
3300031548\|Ga0307408_101302220	Not Available	681	Open in IMG/M
3300031731\|Ga0307405_10677653	Not Available	851	Open in IMG/M
3300031824\|Ga0307413_10960277	Not Available	730	Open in IMG/M
3300031852\|Ga0307410_10048993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	2833	Open in IMG/M
3300031852\|Ga0307410_10095373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2121	Open in IMG/M
3300031852\|Ga0307410_10382122	Not Available	1133	Open in IMG/M
3300031852\|Ga0307410_10938844	Not Available	743	Open in IMG/M
3300031901\|Ga0307406_10257691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1318	Open in IMG/M
3300031903\|Ga0307407_10005867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5384	Open in IMG/M
3300031911\|Ga0307412_11296222	Not Available	656	Open in IMG/M
3300031995\|Ga0307409_100699645	Not Available	1012	Open in IMG/M
3300031995\|Ga0307409_101505741	Not Available	700	Open in IMG/M
3300031995\|Ga0307409_101868768	Not Available	630	Open in IMG/M
3300032002\|Ga0307416_100735677	Not Available	1078	Open in IMG/M
3300032002\|Ga0307416_101093907	Not Available	901	Open in IMG/M
3300032004\|Ga0307414_11928928	Not Available	551	Open in IMG/M
3300032005\|Ga0307411_10697434	Not Available	884	Open in IMG/M
3300032005\|Ga0307411_11007144	Not Available	746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.87%
Host-Associated	Host-Associated	33.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.21%
Plants	Host-Associated → Plants	32.52%
Aquatic	Environmental → Aquatic	11.66%
Mammals	Host-Associated → Mammals	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.54%
Sediment	Environmental → Aquatic → Sediment	8.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.98%
Freshwater	Environmental → Aquatic → Freshwater	3.07%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.84%
Digestive System	Host-Associated → Mammals → Digestive System	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.45%
Loam	Environmental → Terrestrial → Soil → Loam	1.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.23%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.36%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	12.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.84%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Goat Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028453	Goat Fecal Pellet Co-assembly of all samples treated with penicillin and streptomycin from Gen5 and Gen10	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_06650650	2124908045	Soil	MTQPPRQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
F14TC_1029888522	3300000559	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIVTAIVILLAAFGLLGWIFS*
F14TB_1001435301	3300001431	Soil	MTQPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGA
C688J35102_1209887495	3300002568	Soil	MTQPPQQPPTQAFAQQRRSGCGTLLVALLVLTIITAIVILLGAFGLLGWIFS*
Ga0062589_1026245652	3300004156	Soil	EKSAMTQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0066809_102433292	3300005168	Soil	MTQPPPRQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0068852_1020985202	3300005616	Corn Rhizosphere	MTQPPQQPPTHVFAQQRRGGCGTLLVALLVLAIITAIVIFLGAFGLLGWFFS*
Ga0075432_100012445	3300006058	Populus Rhizosphere	MTRPPQQPPTQVVAQQRGSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS*
Ga0075432_100096934	3300006058	Populus Rhizosphere	MTQPPQQPPTQVFAQQRRSGCGALLVALLVLAIITAIVIVLGAFGVLGWIFS*
Ga0075422_100156683	3300006196	Populus Rhizosphere	MTRPPQQPPTEVVAQQRSSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS*
Ga0075420_1013964051	3300006853	Populus Rhizosphere	VISTVEKSAMTPPPRQLPAQVFAQQRRSGCGTLLVALLVLAIITAIVIFLSAFGSLGWIFS*
Ga0075434_1011270422	3300006871	Populus Rhizosphere	MTQPPTQVFGQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0068865_1004298101	3300006881	Miscanthus Rhizosphere	MTPPPRQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVIFLSAFDLLG*
Ga0075426_100316366	3300006903	Populus Rhizosphere	MTRPPQQPPTQVVAPQRGSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS*
Ga0111539_103896021	3300009094	Populus Rhizosphere	MTQPPQQRPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGL
Ga0105245_125163132	3300009098	Miscanthus Rhizosphere	MTPPPRQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVIFLSAFGLLSWIFS*
Ga0075418_114999912	3300009100	Populus Rhizosphere	KQPPTQVFAQQRRSGCGTLLVALLVLGIITAIVIFLGAFGLLGWIFS*
Ga0105091_100764492	3300009146	Freshwater Sediment	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLVLTIITAIVIFLGAFGLLGWIFS*
Ga0105243_105802952	3300009148	Miscanthus Rhizosphere	QPPTQVFAQQRRSGCGTLLVALLVLATITAIVIFLGAFGLLGWIFS*
Ga0105249_113069022	3300009553	Switchgrass Rhizosphere	LNRRSSPPTHVFAQQRRGGCGTLLVALLVLAIITAIVIFLSAFGLLGWIFS*
Ga0105249_120639342	3300009553	Switchgrass Rhizosphere	MTPPPRQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVILLGAFGLLGWIFS*
Ga0126307_100469275	3300009789	Serpentine Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0126307_100943302	3300009789	Serpentine Soil	MTQPPRQPPTPVFAQQRRSGCGTLLVALLVLAIITAIVIFLGALGWLDWIFS*
Ga0126307_103721451	3300009789	Serpentine Soil	MTQPPEQPPTQVSAEQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS*
Ga0126313_100690411	3300009840	Serpentine Soil	PPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0126313_104144602	3300009840	Serpentine Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLIALLVLAIVTATVIFLGAFGLLGWIFS*
Ga0126313_109255531	3300009840	Serpentine Soil	MTQPPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIAIFLASVFR*
Ga0126313_114051841	3300009840	Serpentine Soil	MTQPPRQPPTPVFAQQRRSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS*
Ga0126305_100682443	3300010036	Serpentine Soil	MTQPPQQPPTQVFAQQHRSGCGTILVALLVLAVITAIVIFLGAFGLLDWIYS*
Ga0126305_102064912	3300010036	Serpentine Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0126305_102179693	3300010036	Serpentine Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLIALLVLAIITATVIFLGAFGLLGWIFS*
Ga0126304_102160091	3300010037	Serpentine Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS*
Ga0126308_101561602	3300010040	Serpentine Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLIALLVLAIVTATVIFLGAFGLLGWIFC*
Ga0126308_106354052	3300010040	Serpentine Soil	MTQPRQQPPTQVSAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0126312_100326136	3300010041	Serpentine Soil	MTQPPPQQPPTQVFAQQRSGCGTLLVALLVLAIITAIVIFLGAFGLLSWIFS*
Ga0126314_104012332	3300010042	Serpentine Soil	MTQPPPQQPPTQVFAQQRRSGCGTLLIALLVLAIITATVIFLGAFGLLGWIFS*
Ga0126314_104470511	3300010042	Serpentine Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVALLVLAIITVIVIFLGAFGLLGWIFS*
Ga0126314_105909172	3300010042	Serpentine Soil	MTQPPQQPPTQVSAQQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS*
Ga0126310_111504711	3300010044	Serpentine Soil	MTRPPQQPPTQVSAQQRGSGCGTLLVALLVLGIITAIVIFLGAFGLLDWIFS*
Ga0126310_112012991	3300010044	Serpentine Soil	PTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0126311_105553661	3300010045	Serpentine Soil	QAFAQQRRSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS*
Ga0126311_113289841	3300010045	Serpentine Soil	SAMTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0126306_104271431	3300010166	Serpentine Soil	EKSAMTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0126306_106265553	3300010166	Serpentine Soil	MTQPPPQQPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0138505_1000070792	3300010999	Soil	MTQPPQQPPTQVFAQQRGSGCGTLLVSLLVLAIITAIVIFLGAFGLLGWIFS*
Ga0138505_1000629801	3300010999	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLVTLLAIITAIVILLGAFGLLGWIFS*
Ga0137376_109345562	3300012208	Vadose Zone Soil	MTQPPPPPTQAFAQQRRSGCGTLLVALLVLTIITAIVIFLGAFGLLGWIFS*
Ga0150985_1186433572	3300012212	Avena Fatua Rhizosphere	MTQPPQQPPTQAFAQQRRSGCGTLLVALLVLTIITAIVILLGAFGLLGWIFR*
Ga0150984_1171778891	3300012469	Avena Fatua Rhizosphere	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVILLGAFGLLGWISS*
Ga0157341_10113572	3300012494	Arabidopsis Rhizosphere	MTQPPRPPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0162651_1000641082	3300012938	Soil	MTQPPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFR*
Ga0157307_11806421	3300013096	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAMVIFLGAFGLLGWIFS*
Ga0163162_108940983	3300013306	Switchgrass Rhizosphere	MTQPPRQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0157372_114877873	3300013307	Corn Rhizosphere	MTQPPQQPPTQVFVRQRHSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0157380_107835241	3300014326	Switchgrass Rhizosphere	MTPPPRQPPTQVFAQQRRGGCATLLVALLVLAIITAIVIFLGAFGLLGWFFS*
Ga0182008_105187811	3300014497	Rhizosphere	TQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0132258_118377771	3300015371	Arabidopsis Rhizosphere	MTQPPRQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIF
Ga0132258_126455042	3300015371	Arabidopsis Rhizosphere	MTQPPPQQPPTQVFAQQRRSGCGTLLVALLALAIITAIVIFVGAFGLLGWIFS*
Ga0132256_1007600471	3300015372	Arabidopsis Rhizosphere	MTPPPRQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS*
Ga0132257_1020633571	3300015373	Arabidopsis Rhizosphere	TQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS*
Ga0163161_100957016	3300017792	Switchgrass Rhizosphere	MTPPPRQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVILLGAFGLLSWIFS
Ga0190266_112097271	3300017965	Soil	MTQPPQQPPTQVFGQQRRSGCGTLLVALLALAIITAIVIFLGAFGLLGWIFS
Ga0184604_100206931	3300018000	Groundwater Sediment	MTQPPQQPPRQVFAQQRRSGCGTLIVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0184605_104097562	3300018027	Groundwater Sediment	TQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0184608_103409752	3300018028	Groundwater Sediment	MTQPPPQQPPTQVFVKQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGRIFS
Ga0184634_101908754	3300018031	Groundwater Sediment	MTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0184621_100113982	3300018054	Groundwater Sediment	LTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0184617_11587011	3300018066	Groundwater Sediment	MTQPPPQQPPTQVFAQKRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0184611_10023421	3300018067	Groundwater Sediment	MTQPPQQPPTQVFVQQRRSGCGTLLIALLVLAIITATVIFLGAFGLLGWIFS
Ga0184632_103482191	3300018075	Groundwater Sediment	MTQPPQQPPTQVFAQQRRSGCGTLLVALLKLAIITAIVIFLGAFGVLGWIFS
Ga0184633_101596991	3300018077	Groundwater Sediment	MTQPPQQPPTQVFAQKRRSGGGTLLVALLVLAIITAIC
Ga0184612_102873652	3300018078	Groundwater Sediment	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLTIITAIVIFLGAFGVLGWIFS
Ga0190269_103535502	3300018465	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0190269_111111192	3300018465	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0190268_108736432	3300018466	Soil	MTQPPQQPPRQVFAQQRRSGCGTLLIALLVLGIITAIVIFLGAFGLLGWIFS
Ga0190268_110506941	3300018466	Soil	QPPQQPPTQVIAQQRRSGCGTLLVALLVLAIITAIVILLGAFGLLGWIFS
Ga0184644_10534961	3300019269	Groundwater Sediment	SAMTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0184644_16858432	3300019269	Groundwater Sediment	TPTVEKSAMTQPPPQQPPTQVFVKQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGRIF
Ga0190267_103193841	3300019767	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS
Ga0190267_106704171	3300019767	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVILLAAFGLLDWIFS
Ga0193704_10305192	3300019867	Soil	MTQPPPQQPPTQVFGQQRRSGCGTLVVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0193703_10084944	3300019876	Soil	PPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0193703_10713642	3300019876	Soil	MTQPPQPPTQAFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0210381_100096141	3300021078	Groundwater Sediment	MTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWLFG
Ga0210382_104423821	3300021080	Groundwater Sediment	MTQPPQQPPTQVFAQKRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0224452_10050421	3300022534	Groundwater Sediment	MTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0222623_101062994	3300022694	Groundwater Sediment	VEKSPAMTQPPPQQPPTQVFVQQRRSGCGTLLVALLALAIITAIVIFLGAFGLLGWIFS
Ga0222623_102552581	3300022694	Groundwater Sediment	MTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGAFG
Ga0222622_104302461	3300022756	Groundwater Sediment	MTQPPPQQPPTQGFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0207709_105101981	3300025935	Miscanthus Rhizosphere	MTQPPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVILLGAF
Ga0207704_102214832	3300025938	Miscanthus Rhizosphere	MTPPPRQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVIFLSAFGLLGWIFS
Ga0207689_109199311	3300025942	Miscanthus Rhizosphere	MTQPPRQPPTHVFAQQRRSGCGTLLVALLVLAIITAIVIFLSAFGLLSWIFS
Ga0207712_111308971	3300025961	Switchgrass Rhizosphere	MTPPPRQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0207675_1001696074	3300026118	Switchgrass Rhizosphere	MTPPPQQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVIFLSAFGLLGWIFS
Ga0207428_100158495	3300027907	Populus Rhizosphere	MTQPPQQPPTQVFAQQRRSGCGALLVALLVLAIITAIVIVLGAFGVLGWIFS
Ga0268264_124632881	3300028381	Switchgrass Rhizosphere	MTPPPRQPPTQVFAQQRRGGCGTLLVALLVLAIITAIVIFLGAFGLLGWFFS
Ga0307246_11307082	3300028453	Goat Feces	MTQPPQQPPTQVFAQKRRSGCGTLLVALLVLAIITAIVIFLGA
Ga0307321_10062012	3300028704	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVLAIITAIVIFLGAFGLLGWIFS
Ga0307321_10427053	3300028704	Soil	MTQPPPQQPPTQVFVKQRRSGCGTLLVALLVLAIITAIVIFLGASGL
Ga0307295_100850993	3300028708	Soil	SAMTQPPQQPTTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307295_101264332	3300028708	Soil	MTQPPPQQPRTQQRRSGCGTVLVALLVLAIITAIVIFLGAFDLLG
Ga0307295_101441221	3300028708	Soil	TSTVEKSAMTQPPQQPPTQVFAQQRRSGCGTLLIALLVLAIITAIVIFLGASGLLGWIFS
Ga0307279_100317581	3300028709	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWISS
Ga0307293_102086611	3300028711	Soil	MTQPPPQQPPTQLFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307313_100390583	3300028715	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGRIFS
Ga0307313_102700852	3300028715	Soil	MTQPPQQPPTQLFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307298_100058583	3300028717	Soil	MTQPPPQQPPTQVFGQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307301_101132861	3300028719	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLALAIITAIVIFLGAFGLLGWIFS
Ga0307317_103325501	3300028720	Soil	MTQPPPQQPPTQVFGQQRRSGCGTLVVALLVLAIITAIVIFLGAFGLLGWKI
Ga0307315_1000051312	3300028721	Soil	MTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIV
Ga0307319_101918831	3300028722	Soil	LTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFL
Ga0307320_101128281	3300028771	Soil	MTQPPQQPPTQVFAQKRRSGCGTLLVALLVLAIITAIVIFLRAFGLLGWIFS
Ga0307282_101441742	3300028784	Soil	MTQPPPQQPRTQQRRSGCGTVLVALLVLAIITAIVIFLGAFDLLGWIFG
Ga0307323_100103727	3300028787	Soil	VEKSAMTQPPPQQPPTQGFVQQRRSGCGTLLVLAIITAIVIFLGAFGLLGWIFS
Ga0307323_101229773	3300028787	Soil	MTQPPPQQPPTQVFVKQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGRIFS
Ga0307323_102809061	3300028787	Soil	PPQQPPTQGFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307323_103674021	3300028787	Soil	PPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307290_100190906	3300028791	Soil	MTQPPPQQPRTQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0307284_100477231	3300028799	Soil	MTQPPEQPPTQVSAQRRSGCGTLLVALLVLAIITAIVIFLGASGLLDWISVN
Ga0307305_101270723	3300028807	Soil	SPVMTQPPPQQPPTQVFGQQRRSGCGTLVVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307294_101841811	3300028810	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVLAIITAIVIFLGAFGLLGWISANEG
Ga0307302_100853292	3300028814	Soil	MTQPPQQPPTQVFAQKRRSGSGTHLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307302_102591401	3300028814	Soil	LTQPPPQQPPTQQRRSGCGTVLVALLVLAIITAIVIFLGA
Ga0307302_105107292	3300028814	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVALLVLAIVTAIVIFLGAFGLLGWIFS
Ga0307296_105439201	3300028819	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVALLVLAIITAIVIFLGA
Ga0307296_106805771	3300028819	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0307296_107292181	3300028819	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVTFLGAFGLLDWIFS
Ga0307314_100047472	3300028872	Soil	MTQPPPQQPPTQGFVQQRRSGCGTLLVLAIITAIVIFLGAFGLLGWISANEGSADTSAHRALRW
Ga0307289_100671073	3300028875	Soil	YIHRRESAMTQPPQPPTQAFAQQRRSGCGTLLVALLVLTIITAIVIFLGAFGLLGWIFS
Ga0307278_104760952	3300028878	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGW
Ga0307277_100826582	3300028881	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLIALLVLAIITAIVIFLGASGLLGWIFS
Ga0307277_104244782	3300028881	Soil	MTQPPQQPPRQVFAQQRRSGCGTLIVALLVLAIITAIVIFLGAFGLLG
Ga0308203_10063941	3300030829	Soil	VTSTVEKCAMTQPPQQPPTQVFAQKRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIF
Ga0308206_10321692	3300030903	Soil	MTQPPQQPPTQVFVQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0308200_10635171	3300030905	Soil	TSVTPTVEKSAMTQPPQQPPTQEFPQQRRSGCGTVLVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0308155_10321312	3300030987	Soil	MTQPPPQQPPTQQRRSGCGTLIVALLVLAIITAIVIFLGAFGLLGWIFG
Ga0308204_101115733	3300031092	Soil	MTRPPPQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0308204_101587011	3300031092	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLVVALLVLALITAIVIFLGAFGLLGWIFS
Ga0308193_10052963	3300031096	Soil	KSAMTQPPQQPPTQVFAQKRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0308181_10722971	3300031099	Soil	SAMTQPPPQQPPTQVFVKQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGRIFS
Ga0308187_103955032	3300031114	Soil	MTQPPPQQPPTQVFVQQRRSGCGTLLIALLVLAIITATVIFLGAFG
Ga0308194_101889571	3300031421	Soil	LTSVTSTVEKSAMTQPPQQPPTQVFAQQRRSGCGTLIVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0310887_111491292	3300031547	Soil	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLSAFGLLGWIFS
Ga0307408_1000218274	3300031548	Rhizosphere	MTQPPQPPPTQVFAQQRRSGCGTLLIALLVLAIITAIVIFLGAFGLLDWIFS
Ga0307408_1003704343	3300031548	Rhizosphere	MTQPPEQPPTQVSAEQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS
Ga0307408_1013022202	3300031548	Rhizosphere	MTQPPQQPPTQAFAQQRRSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS
Ga0307405_106776532	3300031731	Rhizosphere	TRPPQQPPIQVFAQQRGSGCGTLLVALLVLATITAIVIFLGAFGLLGWIFS
Ga0307413_109602773	3300031824	Rhizosphere	MTQPPRQPPTPVFAQQRRSGCGTLLVALLVLAIITAIVIFLGALGWL
Ga0307410_100489932	3300031852	Rhizosphere	MTQPPPQQPPTQVFVQQRRSGCGTLLIALLVLAIVTATVIFLGAFGLLGWIFS
Ga0307410_100953734	3300031852	Rhizosphere	MTQPPQQPPTQVFAQQRRSGCGTLLVTLLVLAIITAIVIFLGASGLLGWIFS
Ga0307410_103821221	3300031852	Rhizosphere	MTQPPRQPPTPVFAQQRRSGCGTLLVALLVLAIITAIVIFLGALGWLDWIFS
Ga0307410_109388441	3300031852	Rhizosphere	MTRPPQQPPIQVFAQQRGSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS
Ga0307406_102576911	3300031901	Rhizosphere	IHRRESAMTQPPQQPPRQVFAQQRRSGCGTLIVALVVLAIITAIVIFLGAFGLLGWIFS
Ga0307407_100058678	3300031903	Rhizosphere	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIILGAFGLLDWIFS
Ga0307412_112962221	3300031911	Rhizosphere	STVEKSAMTQPPEQPPTQVSAEQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS
Ga0307409_1006996452	3300031995	Rhizosphere	MTQPPPQQPPTQVFVQQRRSGCGSLIIALLVLAIVTATVIFLGAFGLLGWIFS
Ga0307409_1015057412	3300031995	Rhizosphere	MTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS
Ga0307409_1018687681	3300031995	Rhizosphere	VTSTVEKSAMTRPPQQPPTQVFAQQRGSGCGTLLVALLVLGIITAIVIFLGAFGLLDWIF
Ga0307416_1007356771	3300032002	Rhizosphere	TSTVEKSAMTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIFLGASGLLGWIFS
Ga0307416_1010939071	3300032002	Rhizosphere	EKSAMTRPPQQPPTQVFAQQRGSGCGTLLVALLVLGIITAIVIFLGAFGLLDWIFS
Ga0307414_119289281	3300032004	Rhizosphere	ALTSVTSTVEKSAMTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS
Ga0307411_106974343	3300032005	Rhizosphere	SAMTQPPQQPPTQVFAQQRRSGCGTLLVALLVLAIITAIVIVLGAFGLLGWIFS
Ga0307411_110071442	3300032005	Rhizosphere	EQPPTQVSAQQRRSGCGTLLVALLVLAIITAIVIFLGAFGLLGWIFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039698

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences