NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F039414

Metagenome Family F039414

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F039414
Family Type Metagenome
Number of Sequences 163
Average Sequence Length 46 residues
Representative Sequence FEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPGEPELAKVGP
Number of Associated Samples 61
Number of Associated Scaffolds 163

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 5.37 %
% of genes near scaffold ends (potentially truncated) 87.12 %
% of genes from short scaffolds (< 2000 bps) 91.41 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.387 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(92.025 % of family members)
Environment Ontology (ENVO) Unclassified
(95.706 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(95.092 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.
1Ga0068869_1011712861
2Ga0068869_1016676161
3Ga0068869_1017613791
4Ga0068868_1014541391
5Ga0068866_111955951
6Ga0182122_10103691
7Ga0182113_10320741
8Ga0182188_10180501
9Ga0182188_10241321
10Ga0182188_10343331
11Ga0182172_10055951
12Ga0182172_10141201
13Ga0182170_10120401
14Ga0182170_10548131
15Ga0182170_10587151
16Ga0182128_10388551
17Ga0182174_10086591
18Ga0182174_10260991
19Ga0182174_10738161
20Ga0182160_10084761
21Ga0182160_10421981
22Ga0182124_10104231
23Ga0182124_10207941
24Ga0182156_10098811
25Ga0182156_10177121
26Ga0182156_10662532
27Ga0182171_10397561
28Ga0182141_10477351
29Ga0182141_10941271
30Ga0182126_10555761
31Ga0182175_10260751
32Ga0182175_10733181
33Ga0182157_10338781
34Ga0182106_10389351
35Ga0182106_10884701
36Ga0182107_10015811
37Ga0182107_10065181
38Ga0182107_10552171
39Ga0182107_10709481
40Ga0182143_10715091
41Ga0182123_10173571
42Ga0182123_10673681
43Ga0182112_10377891
44Ga0182158_10248781
45Ga0182158_10895591
46Ga0182144_10041611
47Ga0182144_10360101
48Ga0182140_10024801
49Ga0182140_10098361
50Ga0182140_10219731
51Ga0182127_10195541
52Ga0182127_10349322
53Ga0182127_11205191
54Ga0182110_10043111
55Ga0182110_10607301
56Ga0182129_10276321
57Ga0182129_10409811
58Ga0182109_10545751
59Ga0182109_11481691
60Ga0182109_11976131
61Ga0182189_10441661
62Ga0182189_10804971
63Ga0182189_11566702
64Ga0182111_10672121
65Ga0182111_11071401
66Ga0182111_11822491
67Ga0182111_12175541
68Ga0182139_10648671
69Ga0182139_10706132
70Ga0182139_11896191
71Ga0182139_12396241
72Ga0182161_10122551
73Ga0182161_11394071
74Ga0182159_10278721
75Ga0182159_10341151
76Ga0182159_10682291
77Ga0182159_10883551
78Ga0182159_11010611
79Ga0182159_11552481
80Ga0182159_11794161
81Ga0182159_12463101
82Ga0182159_12934141
83Ga0182159_13459921
84Ga0182145_10075011
85Ga0182145_11616261
86Ga0182203_10208861
87Ga0182203_10221991
88Ga0182203_10291301
89Ga0182203_10357291
90Ga0182203_11163341
91Ga0182203_11277171
92Ga0182220_10460201
93Ga0182220_10667631
94Ga0182204_10012901
95Ga0182204_10033131
96Ga0182204_10108311
97Ga0182204_10327751
98Ga0182204_10726291
99Ga0182207_11462771
100Ga0182208_10231581
101Ga0182208_11257911
102Ga0182222_10168651
103Ga0182222_10203241
104Ga0182222_10216311
105Ga0182222_10263091
106Ga0182222_10922321
107Ga0182228_10220831
108Ga0182228_11139051
109Ga0182219_10245131
110Ga0182219_10388421
111Ga0182219_10692421
112Ga0182224_10066251
113Ga0182224_10778351
114Ga0182224_10933421
115Ga0182190_10375611
116Ga0182190_10582071
117Ga0182190_11187681
118Ga0182192_10452591
119Ga0182192_10701451
120Ga0182192_11584801
121Ga0182209_10261061
122Ga0182209_10464051
123Ga0182209_10497971
124Ga0182209_11514891
125Ga0182191_10252701
126Ga0182191_10327581
127Ga0182191_10413821
128Ga0182191_10754101
129Ga0182191_11690181
130Ga0182221_10519461
131Ga0182221_11335751
132Ga0182193_10037783
133Ga0182193_10164641
134Ga0182193_10490501
135Ga0182193_10710901
136Ga0182193_10760521
137Ga0182193_10969641
138Ga0182193_11858361
139Ga0182226_10745541
140Ga0182218_10043252
141Ga0182225_10116301
142Ga0182225_10478641
143Ga0182225_10731351
144Ga0182225_11197851
145Ga0182225_11217301
146Ga0182227_10772371
147Ga0182205_10114661
148Ga0182205_10132991
149Ga0182205_10509271
150Ga0182205_10914961
151Ga0182205_11130262
152Ga0182223_10136891
153Ga0182223_10154701
154Ga0182223_10188111
155Ga0182223_10410661
156Ga0182232_10127861
157Ga0182232_10362781
158Ga0182232_10546581
159Ga0182232_10727191
160Ga0182232_10796421
161Ga0207642_102216631
162Ga0207688_106534171
163Ga0207689_113925731
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.71%    β-sheet: 0.00%    Coil/Unstructured: 84.29%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540FEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPGEPELAKVGPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Phyllosphere
Miscanthus Phyllosphere
4.3%3.1%92.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068869_10117128613300005334Miscanthus RhizosphereMLVAATPVDYRYRFKGKFKTLRSLPSEHRIELGFFLGLQNYRPNHRENEFTTVGPWRFFEKSLIIGHKTAFV
Ga0068869_10166761613300005334Miscanthus RhizosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRTHPREPKLAKVGP*
Ga0068869_10176137913300005334Miscanthus RhizosphereTPGDYRCRFEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPREPELAKMGP*
Ga0068868_10145413913300005338Miscanthus RhizosphereFEGKFKTLRSLASGHGIELDFFSWLQNYRPHPREPKLSKVGP*
Ga0068866_1119559513300005718Miscanthus RhizosphereGKFKTLRSLPSEHGIELGFFSWLQNYRPHPREPELAKVGP*
Ga0182122_101036913300015267Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPRELELAKVGP*
Ga0182113_103207413300015269Miscanthus PhyllosphereFEGKFKTLRSLPFGHRIELGFFSWLQNYRPHAREPKLAKVGP*
Ga0182188_101805013300015274Miscanthus PhyllosphereKFKTLRSLPFGHGIELGFFSWLQNYRPHPREHELAKVARSDFS*
Ga0182188_102413213300015274Miscanthus PhyllosphereEGKFKTLRSLPSEHGIELGFFSQLQNYRPHPREPKLAKVGPK*
Ga0182188_103433313300015274Miscanthus PhyllosphereKFKTLRSLPFGHGIQLGFFSQLQNYKPHTREPKLAKVGP*
Ga0182172_100559513300015275Miscanthus PhyllosphereMLVVETPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPH
Ga0182172_101412013300015275Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHLGELELAKVGP*
Ga0182170_101204013300015276Miscanthus PhyllosphereMLVAATPADYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGELEFAKVDP*
Ga0182170_105481313300015276Miscanthus PhyllosphereEGKFKTLRSLPSRHGIELGFFSRLQNYRPHPGEPELAKVAP*
Ga0182170_105871513300015276Miscanthus PhyllosphereMRSLDSRHGIELGFFSRLQNYRPHPGEPELAKVAPRDFSK
Ga0182128_103885513300015277Miscanthus PhyllosphereTLRSLPFGHGIELGFFSWLQNYRPHPREHELAKVARSDFS*
Ga0182174_100865913300015279Miscanthus PhyllosphereMLVAATPADYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHEELEFAKVDPKIFF*
Ga0182174_102609913300015279Miscanthus PhyllosphereFKGKFKTLRSLPFGYRIKLSFFLGLQNYKPHHGEPKLAKVGP*
Ga0182174_107381613300015279Miscanthus PhyllosphereTLRSLPFGHRIELGFFLGLQNYNPHHGEPKFVKVGP*
Ga0182160_100847613300015281Miscanthus PhyllosphereMLVAATPVDYRYRFKGKFKTLRSLPSEQRIKLGFFLGLQNYNPHHGEPEFAKVGP
Ga0182160_104219813300015281Miscanthus PhyllosphereRSLPFGHGIELGFFSWLQNYRPHPREHELAKVARSDFS*
Ga0182124_101042313300015282Miscanthus PhyllosphereFKTLRSLPSGHGIELGFFSGLQNYRPHPRELELAKVGP*
Ga0182124_102079413300015282Miscanthus PhyllosphereLVATTPADYRYRFKGKFKTLRSLPSEHRIELNFFSGLQNYKPHHGEPELAKVDP*
Ga0182156_100988113300015283Miscanthus PhyllosphereRFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPRELELAKVGP*
Ga0182156_101771213300015283Miscanthus PhyllosphereRFEGKFKTLRSLPFGHGIELGFFSQLQNYRPHPREPESAKVDP*
Ga0182156_106625323300015283Miscanthus PhyllosphereFEGKFKTLRSLPFGHGIELGFFSWMQNYRPHPREHELAKVARSDFS*
Ga0182171_103975613300015287Miscanthus PhyllosphereEGKFKTLRSLPFGHGIELGFFSWLQNYRPHPREHELAKVARSDFS*
Ga0182141_104773513300015292Miscanthus PhyllosphereVAMKLGDYRCRFEGKFKTLRSLPSGHGIELGFFSRLKNYRPHPREPELAKVG
Ga0182141_109412713300015292Miscanthus PhyllosphereKGKFKTLRSLPFRHRIELGFLSGLQNYNPHHGENEFAKAGP*
Ga0182126_105557613300015294Miscanthus PhyllosphereMLVVATPGDYRYRFKGKFKTLRSLPSGHRIELGFFLGLQNYRPNHREPEFAKVGPWTFFKKSLTIGHKTA
Ga0182175_102607513300015295Miscanthus PhyllosphereMLVVETPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEPKF
Ga0182175_107331813300015295Miscanthus PhyllosphereFEGKFKTLRSLPFGHGIELGFFSWLQNYWPHPREPKLAKVGP*
Ga0182157_103387813300015296Miscanthus PhyllosphereDKFKTLRSLPSGHGIKLGFFSGLYNYRPHPRELELAKVGP*
Ga0182106_103893513300015298Miscanthus PhyllosphereTFEGKFKTLGSLPSGHGIELGFFSQLQNYRLHPREPELAKVGP*
Ga0182106_108847013300015298Miscanthus PhyllosphereVATTSGDSWCRFEGKFKTLRSLPSEHRIELGFFSRLQNYKPHPREPELAKVGP
Ga0182107_100158113300015299Miscanthus PhyllosphereRFEGKFKTLKSLPFGHGIELGFFSQLQNYMPHPLEPKLAKGGH*
Ga0182107_100651813300015299Miscanthus PhyllosphereVATPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEPKFVKVGP*
Ga0182107_105521713300015299Miscanthus PhyllosphereGIELGFFSQLQNYRPHPKEPELAKVAPKDFSKNQLS*
Ga0182107_107094813300015299Miscanthus PhyllosphereFRTLRSLPSRHEIELGFFSQLQNYRTHPREPELAKVGP*
Ga0182143_107150913300015302Miscanthus PhyllosphereMTLRSLPFGHGIELGFFSWLQNYRPHPREHELAKV
Ga0182123_101735713300015303Miscanthus PhyllosphereFEGKFKTLRSLPFGHGIELGFFSRLQNYRPHPREPEMVKMGP*
Ga0182123_106736813300015303Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIKLGFFSQLQNYRPHPREIELAKV*
Ga0182112_103778913300015304Miscanthus PhyllosphereRFEGKFRTLRSLPFGHGIELGFFSRLQNYRPHPRELELAKVGL*
Ga0182158_102487813300015305Miscanthus PhyllosphereMLVAATPMDYRYRFKGKFKTLRSLPFGHRIELGFFSVQQNYNPHPGEIELVKVGQW
Ga0182158_108955913300015305Miscanthus PhyllosphereVATTPGDCRCRFEGKFKTLRSLPFGHGIELGFFIQLQNYKPHPREPELVKMG
Ga0182144_100416113300015307Miscanthus PhyllosphereFKTLRSLPFGHGIELGFFSQLQNYRPHPGGPDLEKVFP*
Ga0182144_103601013300015307Miscanthus PhyllosphereWDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEPEFAKVGP*
Ga0182140_100248013300015314Miscanthus PhyllosphereMLVAATPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHEELEFAKVDPKIFF*
Ga0182140_100983613300015314Miscanthus PhyllosphereRFGGKFRTLRSLPSGHGIELGFFSRLQNYRPHPREPKLKKVGP*
Ga0182140_102197313300015314Miscanthus PhyllosphereEGKFKTLRSLPFGHGIELGFFSWLQNYRPHPREPKLAKVGPY*
Ga0182127_101955413300015321Miscanthus PhyllosphereMLVAATPVDYRCRFEGKFKTLRSLPSRHGIELGFFSQLQNYRPHPRETE
Ga0182127_103493223300015321Miscanthus PhyllosphereMLVAATPWDYRYTFKGKFKTLRSLPFEHRIELSFFSGLQNYNPHHGEPKFA
Ga0182127_112051913300015321Miscanthus PhyllosphereMLVATTPWDYRYRFKGKFKTLRSLPFENRMELGFFLGLQNYNPHHGEPEFAKVGP*
Ga0182110_100431113300015322Miscanthus PhyllosphereFEGKFKTLRSLPSEHGIELGFFSQLQNYRPHPREPKLAKVGPK*
Ga0182110_106073013300015322Miscanthus PhyllosphereLRSLPSEHRIELGFFLGLQNYRLHHGEPELAKEGP*
Ga0182129_102763213300015323Miscanthus PhyllosphereMLVAATPRDYRYRFKGKFKTLRSLPFEHRIELGFFSGLQNYNPHHGEPKFVKVG
Ga0182129_104098113300015323Miscanthus PhyllosphereKTLRSLPSGHGIELGFFSQLQNYRLHPREPELAKVGP*
Ga0182109_105457513300015342Miscanthus PhyllosphereMLVAATPGDYRYRFKGNFKTLRSLLSGHTIELGFFSGLQNYKPHRGEPELAKVGPWRFL*
Ga0182109_114816913300015342Miscanthus PhyllosphereVIPGDYRCRFEGKFKTLRSLPSGHGIELGFFSWLQNYRPHPREPELAKVGPY*
Ga0182109_119761313300015342Miscanthus PhyllosphereKFKTLISLPSGHGIELGFFSQLQNYRPHPRETELAKMGQWTIFEK*
Ga0182189_104416613300015344Miscanthus PhyllosphereCKFEGKFKTLRSLPSGHEIELGFFSRLQNYRPHPREPKLAKVGPLRFF*
Ga0182189_108049713300015344Miscanthus PhyllosphereKFKTLRSLPSGHGIELGFFSQLQNYRPHPREPELAKMGP*
Ga0182189_115667023300015344Miscanthus PhyllosphereEGKFKTLRSLPFGHGIELGFFSQLQNYRPHPREPELTKVDP*
Ga0182111_106721213300015345Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSWVQNYRPHPGQPELAKVGP*
Ga0182111_110714013300015345Miscanthus PhyllosphereRFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPREQELAKVGP*
Ga0182111_118224913300015345Miscanthus PhyllosphereFEGKFKTLRPLPSGNGIELGFFSQLLNYRPHPRETKLAKVGQWRFF*
Ga0182111_121755413300015345Miscanthus PhyllosphereGDYRCRFEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPREPELAKMGP*
Ga0182139_106486713300015346Miscanthus PhyllosphereRFEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPREPELAKMGP*
Ga0182139_107061323300015346Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPREPKLEKVGPY*
Ga0182139_118961913300015346Miscanthus PhyllosphereGDYRCRFEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPRETELAKMGQWTIFEK*
Ga0182139_123962413300015346Miscanthus PhyllosphereVAVTLTDYRYRFKGKFKTLRSLPFGHRIKLGFFSGLQNYKPHHGEPELAKV
Ga0182161_101225513300015351Miscanthus PhyllosphereEGKFKTLRSLPFGHGIELGFFSRLQNYRPHPREPELTKVGC*
Ga0182161_113940713300015351Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIKLGFFSWLQNYRPHPREPELAKVGP*
Ga0182159_102787213300015355Miscanthus PhyllosphereLVVETPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEPKFAKVGP*
Ga0182159_103411513300015355Miscanthus PhyllosphereGKFKTLRSLPFGHRIELSFFSGLQNYKLHHGEPELAKVGP*
Ga0182159_106822913300015355Miscanthus PhyllosphereMLVAATPWDYRYRFNSKFKTLRYLPFGHRIELSFFLGLQNYNPHHGEPK
Ga0182159_108835513300015355Miscanthus PhyllosphereEGKFKTLRSLPFGHGIELGFFSQLQNYRPHPREPELEKVGPLRFF*
Ga0182159_110106113300015355Miscanthus PhyllosphereMLVATTPMDYRYRFKGKFKTLRSLPFGHRIELGFFSGLQNYNPHHGEPEF
Ga0182159_115524813300015355Miscanthus PhyllosphereKFKTLRSLPFGHGIELGFFSWLQNYRPHPREPELAKVGR*
Ga0182159_117941613300015355Miscanthus PhyllosphereFKTLISLHFRHGIELGFFSWLQNYRPHPGELELVEVDP*
Ga0182159_124631013300015355Miscanthus PhyllosphereFKTLRSLPSGHGIELGFFSRLQNYRPHPGEPELAKVGP*
Ga0182159_129341413300015355Miscanthus PhyllosphereKFKTLRSLPSGHGIEVGFFSQLQNYKPHPREPKLAKVDP*
Ga0182159_134599213300015355Miscanthus PhyllosphereMLVAMTPVDYRYRFKGKSKTLRSSNSGHRIELSFFLGLQNYRPHHGEPKL
Ga0182145_100750113300015361Miscanthus PhyllosphereLVAATPVDYRYRFKGKFKTLRSLPSGHRIELNFFSGLQNYKPHHGEPELAKVGP*
Ga0182145_116162613300015361Miscanthus PhyllosphereRFEGKFKTLRSLPSRHGIELGFFSWLQNYRPHPGEPELAKVAP*
Ga0182203_102088613300017404Miscanthus PhyllosphereKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGELEFAKVDP
Ga0182203_102219913300017404Miscanthus PhyllosphereFEGKFKTLRSLPSGHRIELGFFLGLQNYRLHHGELKLAKVGP
Ga0182203_102913013300017404Miscanthus PhyllosphereTLRSLPFGHRIELGFFSGLQNYRPHHGEPKLEKVGP
Ga0182203_103572913300017404Miscanthus PhyllosphereMLVVETPVDYRYRFKGKFRTLRSLPFGHRIELGFFLGLQNYNPHHGEPKFAK
Ga0182203_111633413300017404Miscanthus PhyllosphereVTPRDYRCRFEGKFKTLRSLPSGHRIKLGFFSQLQNYRPHPGEPELAKVG
Ga0182203_112771713300017404Miscanthus PhyllosphereMLVATTPWDYRYRFKGKFKTLRSLPFENRMELGFFLGLQNYNPHHGEPEFAKVGP
Ga0182220_104602013300017407Miscanthus PhyllosphereGKFKTLRSLPFGHRIELSFFSGLQNYNPHHGEPKFAKVGP
Ga0182220_106676313300017407Miscanthus PhyllosphereGKFKTLRSLPSGHRVELSFFLGLQNYKPHHGEPELAKVGP
Ga0182204_100129013300017409Miscanthus PhyllosphereMLVVETPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEPKFAKVGP
Ga0182204_100331313300017409Miscanthus PhyllosphereRFEGKFKTLRSLPFGHGIELGFFSRLQNYRPHPREPKLAKVGP
Ga0182204_101083113300017409Miscanthus PhyllosphereVAVTPKDYRYRFDGKFKTLRSLSSGHGIELDFFSRSHNYRPHPGEPELANVGP
Ga0182204_103277513300017409Miscanthus PhyllosphereVAATPVDYRYRFKGKFKTLRSLPSGHRIELSFFSGQQNYMPPHGELELVKVGP
Ga0182204_107262913300017409Miscanthus PhyllosphereTPGDYRYRFEGKFKTLRSLPSGHRIELGFFLGLQNYRLHHGEPELAKEGP
Ga0182207_114627713300017410Miscanthus PhyllosphereSLPSGHRIELGFFSGLQNYRPDHREPKLAKVGQWRFF
Ga0182208_102315813300017411Miscanthus PhyllosphereEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPREPELAKMGP
Ga0182208_112579113300017411Miscanthus PhyllosphereMLVAATPVDYRYRFKGKFKTLRSLPSKHRIELSFFLGLQNYKPHHGEPQ
Ga0182222_101686513300017413Miscanthus PhyllosphereTLVATKLGDYRCRFEGKFKTSRSLPSGHGIELGFFSRQQNYRPHPGEPKLAKVGPLRFF
Ga0182222_102032413300017413Miscanthus PhyllosphereRFEGKFRTLRSLPFGHGIELGFFSRLQNYRPHPRELELAKVGL
Ga0182222_102163113300017413Miscanthus PhyllosphereCRFEGKSKTLGSLSSGHGIELGFFARLQNYRPHPREPELAKVGP
Ga0182222_102630913300017413Miscanthus PhyllosphereFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGELEFAKVDP
Ga0182222_109223213300017413Miscanthus PhyllosphereVLVAVTSGDCRCRFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPRELELAKVGP
Ga0182228_102208313300017420Miscanthus PhyllosphereMLVAATPRDYRCRFEGKFKTLRALPSKYGIELGLFSWLQNYNPHHGELEFAKVVP
Ga0182228_111390513300017420Miscanthus PhyllosphereYRFEGKFKTLRSLPFGHRMELGFFSRLQNYRPHHGEPELAKVGT
Ga0182219_102451313300017424Miscanthus PhyllosphereKTLRSLPFGHGIEQGFFSGLQNYRPRHGEPELAKVGPY
Ga0182219_103884213300017424Miscanthus PhyllosphereKFKTLRSLPFGHRIELGFFSGLQNYNPHHGKPEFAKVGP
Ga0182219_106924213300017424Miscanthus PhyllosphereFKTLRSLPFGHRIELGFFSGLQNYNPHHGENEFAKAGP
Ga0182224_100662513300017425Miscanthus PhyllosphereRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGELEFAKVDP
Ga0182224_107783513300017425Miscanthus PhyllosphereVAATPEDYRCRLEGKFKTLRSLPSGHRIELGFFSGLQNYRPNHREPEFAKVGPWTFFKKSLIIGHK
Ga0182224_109334213300017425Miscanthus PhyllosphereKFKTLRSLPFGHGIELGFFSWLQNYWPHPREPKLAKVGP
Ga0182190_103756113300017427Miscanthus PhyllosphereTLWDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEPEFAKVGP
Ga0182190_105820713300017427Miscanthus PhyllosphereRFEGKFKTLRSLPSGHGIELGFFLRLQNYRPHPREPELAKMGP
Ga0182190_111876813300017427Miscanthus PhyllosphereVAATPGDYQCRFEGKFKTLRSLPSGHGIEVGFFSQLQNYKPHPREPKLAKVD
Ga0182192_104525913300017430Miscanthus PhyllosphereGKFKTLRSLPFGHGIELGFFSQLQNYRPHPREPELAKVDP
Ga0182192_107014513300017430Miscanthus PhyllosphereMLVAMTPWDYRYRFKGKFKTLRSLPYGNRIELGFFSGLQNYNPHHGEPELAKVGPYRFF
Ga0182192_115848013300017430Miscanthus PhyllosphereATPMDYRYRFKGKFKTLRSLPFEHRIELGFFSGLQNYKPHHGEPELAKVGRWRFF
Ga0182209_102610613300017436Miscanthus PhyllosphereMLVVATPVDYRYRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGEHKFVK
Ga0182209_104640513300017436Miscanthus PhyllosphereGTLVAMTLGDCRCRFEGKFKTLRSLPFGHGIELGFFSQLQNYRPHPREPELEKVGPLRFF
Ga0182209_104979713300017436Miscanthus PhyllosphereEGKFRTLRSLPFGHGIELGFFSRLQNYRPHPRELELAKVGL
Ga0182209_115148913300017436Miscanthus PhyllosphereLRSLPFGHRIELGFFLGLQNYNPHHGEHKFVKVGP
Ga0182191_102527013300017438Miscanthus PhyllosphereAAVTLGDRRYKFEGKFKTLRSLPSGNGIELGFFSRLQNYSPHPREPELAKVGP
Ga0182191_103275813300017438Miscanthus PhyllosphereFEGKFKTLRSLPFGHGIELGFFSRLQNYRPHPREPELTKVGC
Ga0182191_104138213300017438Miscanthus PhyllosphereGKFKTLRSLPFGHGIELGFFSWLQNYRPHPREPELAKVGR
Ga0182191_107541013300017438Miscanthus PhyllosphereDYRCGFEGKFKTLRSLPFGHGIELGFFSQLQNYRPHPGGPDLEKVFP
Ga0182191_116901813300017438Miscanthus PhyllosphereFKTLRSLPFEHRIELGFFSGLQNYNPHHGEPKFVKVGPRDYSKNHLS
Ga0182221_105194613300017442Miscanthus PhyllosphereFEGKFKTLRSLPFRHGIELGFFSRLLNYRPHPREPELAKVGC
Ga0182221_113357513300017442Miscanthus PhyllosphereMTSLDSRHGIELGFFSRLQNYRPHPGEPELAKVAPRDFSK
Ga0182193_100377833300017443Miscanthus PhyllosphereRFEGKFRTLRSLPSEHGIELGFFSRLLNYRPHPREPELAKVGP
Ga0182193_101646413300017443Miscanthus PhyllosphereMLVAATPGDYRYRFKGNFKTLRSLLSGHTIELGFFSGLQNYKPHRGEPELAKVGPWRFL
Ga0182193_104905013300017443Miscanthus PhyllosphereVATTPGDCRSRFEGKFKTLRSLPSGHGIELGFFSWLQNYRPHPREPELAKV
Ga0182193_107109013300017443Miscanthus PhyllosphereLRSLNFGHRIELGFFSGLQNYNPHHGEPEFAKVGP
Ga0182193_107605213300017443Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPRELELAKVGPW
Ga0182193_109696413300017443Miscanthus PhyllosphereYRFKGKFKTLRSLPFGHRIELGFFSGLQNYNPHHGKPEFAKVGP
Ga0182193_118583613300017443Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSQLQNYMPHPREPELAKMGP
Ga0182226_107455413300017681Miscanthus PhyllosphereRCRFKGKFKTLISLPSGHGIELGFLSLLQNYRPHPGEPEFAKVGP
Ga0182218_100432523300017683Miscanthus PhyllosphereMLVAMTPVDYRYRFKGKSKTLRSSNSGHRIELSFFLGLQNYRPHHGE
Ga0182225_101163013300017684Miscanthus PhyllosphereEGKFKTLRSLPFGYGIELGFFSRLQNYRPHPREPELVKMGP
Ga0182225_104786413300017684Miscanthus PhyllosphereRFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPREPDLAKVGP
Ga0182225_107313513300017684Miscanthus PhyllosphereLVAATPGDYRYRFEGKFKTLRSLPSGHRIELGFFLGLQNYRLHHGEPELAKEGP
Ga0182225_111978513300017684Miscanthus PhyllosphereGDYRCRFEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPRETELAKMGQWRIFEK
Ga0182225_112173013300017684Miscanthus PhyllosphereLRSLPSGHGIELGFFSRLQNYRPHPREPELAKVGP
Ga0182227_107723713300017685Miscanthus PhyllosphereKFKTLRSLPSGHGIELGFFSRLQNYKPHPREPELAKVGP
Ga0182205_101146613300017686Miscanthus PhyllosphereRFKGKFKTLRSLPFGHRIELGFFLGLQNYNPHHGQHKFVKVGP
Ga0182205_101329913300017686Miscanthus PhyllosphereRFEGKFKTLRSLPFGHGIQLGFFSQLQNYKPHTREPKLAKVGP
Ga0182205_105092713300017686Miscanthus PhyllosphereRFEGKFKTLRSLPSGHGIELGFFSQLQNYRPHPREPEFAKMGP
Ga0182205_109149613300017686Miscanthus PhyllosphereTSGDYRCRFEGKFKTLRSLPSRHGIELGFFSWLQNYRPHPGEPELAKVAP
Ga0182205_111302623300017686Miscanthus PhyllosphereEGKFKTLRSLPSEHGIELGFFSRLQNYKPHPREPELAKVGP
Ga0182223_101368913300017690Miscanthus PhyllosphereTPRDYRCRFEGKFKTLRSLPFGHGIELGFFLGLQNYRPHPREPELVKVGP
Ga0182223_101547013300017690Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPREPDLAKVRP
Ga0182223_101881113300017690Miscanthus PhyllosphereFEGKFKTLRSLPSGHGIELGFFSRLQNYRPHPGEPELAKVGP
Ga0182223_104106613300017690Miscanthus PhyllosphereFKTLISLPSGHGIELGFFSRLQNYRPHPREPKLAKVGP
Ga0182232_101278613300021060PhyllosphereRSLPFGHGIELGFFSWLQNYRPHPREHELAKVARSDFS
Ga0182232_103627813300021060PhyllospherePWDYRYRFKGKFKTLRSLPSGHRIELGFFSGLQNYNPHHGELEFAKVVP
Ga0182232_105465813300021060PhyllosphereRFKGKYKTLRSLPFGHRIELGFFSGLQNYNPHHGKPEFAKVGP
Ga0182232_107271913300021060PhyllosphereRFEGKFRTLRSLPSGHGIELGFFSWLQNYRPHPREPKLAKSGPIVIFVKNPLS
Ga0182232_107964213300021060PhyllosphereMLVVATPWDYRYRFKGKFKTLRSLPFGNRIELGFFSGLQNYNPHHGEPKFAKVG
Ga0207642_1022166313300025899Miscanthus RhizosphereRFEGKFKTLRSLPFEHGIELGFFSRLQNYRPHPREPELAKVGP
Ga0207688_1065341713300025901Corn, Switchgrass And Miscanthus RhizosphereKFKTLRSLPFGHGIELGFFSWLQNYRPHPREPELVKMGP
Ga0207689_1139257313300025942Miscanthus RhizosphereSLPFGHGIELGFFSWLQNYRPHPREHELAKVARSDFS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.