NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F039199

Metagenome / Metatranscriptome Family F039199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F039199
Family Type Metagenome / Metatranscriptome
Number of Sequences 164
Average Sequence Length 48 residues
Representative Sequence ALSSDGRTSERSVQVTQDILEQAGILKKRVAYSELVTNEFLPK
Number of Associated Samples 152
Number of Associated Scaffolds 164

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 61.59 %
% of genes from short scaffolds (< 2000 bps) 59.76 %
Associated GOLD sequencing projects 141
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (62.805 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(10.976 % of family members)
Environment Ontology (ENVO) Unclassified
(37.805 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.854 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.35%    β-sheet: 2.82%    Coil/Unstructured: 71.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 164 Family Scaffolds
PF00528BPD_transp_1 70.12
PF00293NUDIX 1.22
PF00012HSP70 1.22
PF09084NMT1 0.61
PF13620CarboxypepD_reg 0.61
PF00171Aldedh 0.61
PF10531SLBB 0.61
PF12728HTH_17 0.61
PF00892EamA 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 164 Family Scaffolds
COG0443Molecular chaperone DnaK (HSP70)Posttranslational modification, protein turnover, chaperones [O] 1.22
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.61
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.61
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.61
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.61
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.61

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.80 %
UnclassifiedrootN/A37.20 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_9120519All Organisms → cellular organisms → Bacteria1286Open in IMG/M
2228664021|ICCgaii200_c0665401All Organisms → cellular organisms → Bacteria984Open in IMG/M
2228664022|INPgaii200_c0847855All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10174542All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1054034All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300000890|JGI11643J12802_12105866All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300000890|JGI11643J12802_12114739All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300003997|Ga0055466_10161927All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300004463|Ga0063356_105736728All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005172|Ga0066683_10296857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1004Open in IMG/M
3300005183|Ga0068993_10291272All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005206|Ga0068995_10008512All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300005328|Ga0070676_10908859All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300005329|Ga0070683_100547660All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300005330|Ga0070690_100286453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1177Open in IMG/M
3300005335|Ga0070666_10610361All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300005340|Ga0070689_100834932All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300005343|Ga0070687_100818489All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300005365|Ga0070688_100207404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1374Open in IMG/M
3300005440|Ga0070705_100458265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales958Open in IMG/M
3300005446|Ga0066686_10051255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2519Open in IMG/M
3300005446|Ga0066686_10753739All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005467|Ga0070706_101160178All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005471|Ga0070698_102231910All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005536|Ga0070697_100877079All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005545|Ga0070695_100702454All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300005554|Ga0066661_10323748All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300005557|Ga0066704_10504114All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300005558|Ga0066698_10081473All Organisms → cellular organisms → Bacteria2106Open in IMG/M
3300005843|Ga0068860_100331513All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300006196|Ga0075422_10474285All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300006797|Ga0066659_10260053All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300006806|Ga0079220_11545125All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300006853|Ga0075420_101367994All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300006904|Ga0075424_101513240All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300006914|Ga0075436_100373653All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300009100|Ga0075418_10494470All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300009100|Ga0075418_10734718All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300009147|Ga0114129_10648991All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300009174|Ga0105241_10600512All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300009444|Ga0114945_10080466All Organisms → cellular organisms → Bacteria1810Open in IMG/M
3300009444|Ga0114945_10483038All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300009444|Ga0114945_10591683All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300009545|Ga0105237_10718803All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300009609|Ga0105347_1531323All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300010046|Ga0126384_10656918All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300010376|Ga0126381_101936154All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300011402|Ga0137356_1096058All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300012039|Ga0137421_1144336All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300012353|Ga0137367_11169689All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012359|Ga0137385_11355947All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300012360|Ga0137375_10272991All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300012406|Ga0134053_1019714All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300012489|Ga0157349_1022741All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300012675|Ga0137337_1073021All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012912|Ga0157306_10158844All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300012918|Ga0137396_10427741All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300012923|Ga0137359_10342802All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300012948|Ga0126375_10713604All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300012985|Ga0164308_11945962All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012986|Ga0164304_11277016All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300014870|Ga0180080_1037763All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300014871|Ga0180095_1086951All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300014968|Ga0157379_12222448All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300015372|Ga0132256_101408325All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300015373|Ga0132257_102941071All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300017659|Ga0134083_10073001All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300018031|Ga0184634_10475637All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300018031|Ga0184634_10480965All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300018063|Ga0184637_10519163All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300018068|Ga0184636_1227110All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300018074|Ga0184640_10541401All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300018075|Ga0184632_10011489All Organisms → cellular organisms → Bacteria3715Open in IMG/M
3300018075|Ga0184632_10057886All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300018089|Ga0187774_11173308All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300018422|Ga0190265_10397247All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300019789|Ga0137408_1148759All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300021432|Ga0210384_11746540All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300022694|Ga0222623_10066489All Organisms → cellular organisms → Bacteria1393Open in IMG/M
3300025173|Ga0209824_10111309All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300025314|Ga0209323_10513312All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300025319|Ga0209520_10464649All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300025321|Ga0207656_10573276All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300025903|Ga0207680_10629393All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300025912|Ga0207707_10973781All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300025918|Ga0207662_10764400All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300025944|Ga0207661_10996424All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300025961|Ga0207712_12027810All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300025981|Ga0207640_10807336All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300026332|Ga0209803_1006440All Organisms → cellular organisms → Bacteria6579Open in IMG/M
3300027513|Ga0208685_1142182All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300027680|Ga0207826_1200590All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300027695|Ga0209966_1006603All Organisms → cellular organisms → Bacteria2017Open in IMG/M
3300027875|Ga0209283_10186935All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300031720|Ga0307469_11119338All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300031740|Ga0307468_102319006All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031824|Ga0307413_10849900All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300031942|Ga0310916_10526836All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300031947|Ga0310909_10638069All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300032180|Ga0307471_100297689All Organisms → cellular organisms → Bacteria → Proteobacteria1699Open in IMG/M
3300032205|Ga0307472_100538315All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300032782|Ga0335082_11262113All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300033486|Ga0316624_10106384All Organisms → cellular organisms → Bacteria1991Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.98%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil8.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.32%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.27%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.66%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.05%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.05%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs2.44%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.44%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.22%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.22%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.22%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.22%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.22%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.22%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.22%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.61%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.61%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.61%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.61%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.61%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2162886006Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000043Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphereHost-AssociatedOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011402Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012675Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300014871Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1DaEnvironmentalOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025173Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)EnvironmentalOpen in IMG/M
3300025314Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027948Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICI_002369802088090015SoilVLPTLSSDGRVSERSFQTTQEILEQARMLKKRVSYSELVTNEFLAK
SwRhRL3b_0951.000000402162886006Switchgrass RhizosphereLSPDGRTSERNFQVTQDILEQAGILKKRSPYAELVTNEFLSK
ICCgaii200_066540112228664021SoilAAAVLPTLSSDGRVSERSFQTTQEILEQARMLKKRVSYSELVTNEFLAK
INPgaii200_084785522228664022SoilPDLLLAGVKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVAYSEVVTNEFLAK
ARcpr5yngRDRAFT_02550613300000043Arabidopsis RhizosphereRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK*
AF_2010_repII_A1DRAFT_1017454213300000597Forest SoilLLLSGANAVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
AF_2010_repII_A100DRAFT_105403413300000655Forest SoilTDPELLLSGANAVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
JGI11643J12802_1210586633300000890SoilLAGAAAVLPALSADGRTTERSFQVTQDILEQAGILKKRTSYAELVTNEFVSK*
JGI11643J12802_1211473913300000890SoilVLPTLSSDGRTSDKSYQITQDILEQGGILKKRAPYAELVNNEFLMK*
JGI10214J12806_1107149213300000891SoilVSERSFQTTQEILEQAGMLKKRVSYSELVTNEFLAK*
AP72_2010_repI_A001DRAFT_104665213300000893Forest SoilSPDGRTSERSVQITQDILEQAGILKKRVAYSEVVTNEFLAK*
JGI24036J26619_1010819923300002128Corn, Switchgrass And Miscanthus RhizosphereSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK*
Ga0055466_1016192723300003997Natural And Restored WetlandsSMTTIKPDLLLSGVKAVVPALSKDGRTSERSVQVTQDILEQAGILKKRVAYADVVTNDFLMK*
Ga0062593_10315220813300004114SoilSSDGRVSERSFQTTQEILEQARMLKKRVSYSELVTNEFLAK*
Ga0063356_10573672823300004463Arabidopsis Thaliana RhizosphereLLAGAAAVLPTLSPDGRTSERSFQTTQEILEQAGLLKKRVSYSELVTNEFLAK*
Ga0066683_1029685723300005172SoilSPDLLLAGVNSVLPTLSPDGRTSERSFQITQDILEQAGILKKRSPYAELVTNEFLMK*
Ga0068993_1029127213300005183Natural And Restored WetlandsKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVSYSDIVTNDFLSK*
Ga0068995_1000851213300005206Natural And Restored WetlandsAPDLLLAGVKAVLPTLSSDGRTSEKSFQITQDILEQAGILKKRAPYAELVSNDFLTK*
Ga0070676_1090885913300005328Miscanthus RhizosphereLAGAAAVLPTLSSDGRISERSFQTTQEILEQAGMLKKRVSYSELVTNEFLAK*
Ga0070683_10054766013300005329Corn RhizosphereVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK*
Ga0070690_10028645313300005330Switchgrass RhizosphereVLPSLSKDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0070666_1061036123300005335Switchgrass RhizosphereTIAPELLLAGVKAVLPTLSSDGRTSEKSVQITQDVLEQAGILKKRAPYAELVSNDFLAK*
Ga0068868_10067385923300005338Miscanthus RhizosphereDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0070689_10083493223300005340Switchgrass RhizosphereLLLTGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRLAYSDVVNNDFLLK*
Ga0070687_10081848923300005343Switchgrass RhizosphereLTGVRAVLPSLSKDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0070688_10020740433300005365Switchgrass RhizospherePDLLLTGVRAVLPALSKDGRTSERSVQVTQDILEQAGILKKRLAYSDVVNNDFLLK*
Ga0070705_10045826523300005440Corn, Switchgrass And Miscanthus RhizosphereIAPDLLLSGVKSVLPALSADGRTSERSMQITQDVLEQAGILKKRAPFGELVSNDFLVK*
Ga0066686_1005125513300005446SoilLKPSMATIAPDLLLAGVKSVLPALSQDGRTSERSAQITQDVLEQAGILKKRVPYAEIVSNEFLAK*
Ga0066686_1075373913300005446SoilPSLGKTEPAILLAGVKSVLPALSPDGRITERRVQITQDILEQAGILKKRVGYSEVVSNEFLPK*
Ga0066681_1041523313300005451SoilLSKDGRTSERSVQVTQDILEQAGILKKRIAYADIVTNDFLMK*
Ga0070678_10012825243300005456Miscanthus RhizospherePALSKDGRTSERSVQVTQDILEQAGILKKRLAYSDVVNNDFLLK*
Ga0070706_10116017823300005467Corn, Switchgrass And Miscanthus RhizosphereLAGVRAVLPALSPDGRTSERSVQVTQDILEQAGILKKRVPQSEIVTNEFLSK*
Ga0070698_10223191013300005471Corn, Switchgrass And Miscanthus RhizosphereLLLAGAAAVLPALSPDGRTSERNFQVTQDILEQAGILKKRSPYAELVTNEFLSK*
Ga0070697_10087707913300005536Corn, Switchgrass And Miscanthus RhizosphereLLLTGVKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVAYSEIVTNEFLTK*
Ga0070695_10070245423300005545Corn, Switchgrass And Miscanthus RhizosphereQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK*
Ga0066661_1032374813300005554SoilVLLSGVKTTLPALSRDGRTTERGAQVTQDVLEQAGILKKRVPYAEVANNAFLR*
Ga0066704_1050411423300005557SoilGVKTTLPALSRDGRTTERGAQVTQDVLEQAGILKKRVPYAEVANNTFLR*
Ga0066698_1008147333300005558SoilDLLLAGVNSVLPTLSPDGRTSERSFQITQDILEQAGILKKRSPYAELVTNEFLMK*
Ga0066703_1046617713300005568SoilSRDGRTTERGTQVTQDVLEQAGILKKRAPYAEVANNTFLR*
Ga0068864_10050133113300005618Switchgrass RhizosphereERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0068851_1104782723300005834Corn RhizosphereSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0068860_10033151313300005843Switchgrass RhizosphereVLPALSKDGRTSERSVQVTQDILEQAGILKKRLAYSDVVNNDFLLK*
Ga0075422_1047428513300006196Populus RhizosphereMTTIQPDLLLAGVQAVRPALSKDGRTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK*
Ga0066659_1026005313300006797SoilVKSVLPALSQDGRTSERSAQITQDVLEQAGILKKRVPYAEIVSNEFLAK*
Ga0066660_1011373613300006800SoilPALSTDGRTSERSAQITQDVLEQAGILKKRVPYAEIVSNEFLAK*
Ga0079220_1154512523300006806Agricultural SoilVLPALSKDGRTSERSVQVTEDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0075430_10068495023300006846Populus RhizosphereTTERSFQVTQDILEQAGILKKRTSYAELVTNEFLSK*
Ga0075420_10136799413300006853Populus RhizosphereANSVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0075425_10021629143300006854Populus RhizosphereALSKDGRTSERSVQVTQDILEQAGILKKRVAFSDIVTNDFLMK*
Ga0075434_10068773913300006871Populus RhizosphereGRTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK*
Ga0075424_10151324023300006904Populus RhizosphereGVKSVLAALSPDGRISDRSVQITQDILEQAGILKKRVVTTEIVSNDFLSK*
Ga0075436_10037365323300006914Populus RhizosphereQAVRPALSKDGRTSERSVQVTQDILEQAGILKKRIAYADIVTNDFLMK*
Ga0079219_1128358123300006954Agricultural SoilLSKDGRISERSVQVTQDILEQAGILKKRVAVADVATNDFLMK*
Ga0099828_1058504723300009089Vadose Zone SoilSERSFQGTQDMLEQAGLLKKRLPYSEIVTNEFLPK*
Ga0099827_1105987223300009090Vadose Zone SoilPDGRTSERSFQGTQDMLEQAGLLKKRLPYSEIVTNEFLPK*
Ga0075418_1049447023300009100Populus RhizosphereLPALSPDGRTSERSFQVTQDILDQAGILKKRSPYAELVTNEFLTK*
Ga0075418_1073471813300009100Populus RhizospherePALGKTPPDLLLAGAASVLPALSPDGRTSERSFQVTQDVLEQAGILKKRAPYSELVTNEFLVK*
Ga0114129_1064899133300009147Populus RhizosphereGANSVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0111538_1073679823300009156Populus RhizosphereSERSVQITQEILEQAGILKKRVGYSDIVNNDFLMK*
Ga0105241_1060051213300009174Corn RhizosphereKPDLLLTGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK*
Ga0114945_1008046613300009444Thermal SpringsILLAGVRALPPTLSPDGRTTERSLQTTQDILEVAGLLKKRVAYADIVTNDFLPK*
Ga0114945_1048303813300009444Thermal SpringsILLAGVRALPPTLSPDGRTTERSLQTTQDILEVAGLLKKRVAYADIVTNEFLPK*
Ga0114945_1059168313300009444Thermal SpringsTPFLGKTTNPAVLLDGVKSVLPALSPDGRTSERSVQITQDVLEQAGILKKRVVFSDVVSNDFLPR*
Ga0105237_1071880313300009545Corn RhizosphereTTIKPDLLLTGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK
Ga0105238_1133609413300009551Corn RhizosphereRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0105347_153132323300009609SoilVLPALSPDGRTSERSFQVTQDILEQAGILKKRAPYNELVTNEFLAK*
Ga0105078_101418323300009823Groundwater SandSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0126384_1065691823300010046Tropical Forest SoilDPALLVSGAKAVIPTISPDGRTSERSVQVTQDLLEQAGLLKKRVPYSELVVNEFLPK*
Ga0126384_1106557023300010046Tropical Forest SoilRTTERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0126372_1046575213300010360Tropical Forest SoilRVSERAVQVTQDVLGQAGILKKRVPYTEIVTNNFLAK*
Ga0126381_10193615413300010376Tropical Forest SoilANAVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0134121_1117409623300010401Terrestrial SoilADGRTSERSMQITQDVLEQAGILKKRAPFGELVSNDFLVK*
Ga0137356_109605823300011402SoilLLAGAAAVLPALSKDGRTSERSFQVTQDILEQAGILKKRVAYAELVTNEFLMK*
Ga0137442_107005823300011414SoilLSADGRTSERSFQVTQDILEQAGILKKRATYGELVTNEFLGK*
Ga0137455_109718313300011429SoilERSFQVTQDVLEQAGILKKRAPYSELVTNEFLAK*
Ga0137426_105602233300011435SoilPALSPDGRTSERSFQVTQDILEQAGILKKRAPYNELVTNEFLAK*
Ga0137433_113598423300011440SoilGRTTEKSVQATQDVLEQAGLLKKRVAYSDVVSNEFLPR*
Ga0137421_114433623300012039SoilPALSPDGRTSERSFQVTQDILEQAGILKKRSAYAELVTNEFLGK*
Ga0137367_1116968913300012353Vadose Zone SoilFMAKIDPELLLSGANSVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0137385_1135594713300012359Vadose Zone SoilLLLAGVQAVRPALSKDGRTSERSVQVTQDILEQAGILKKRIAYADIVTNDFLMK*
Ga0137375_1027299113300012360Vadose Zone SoilGKTPPDLLLAGAAAVLPALSPDGRTSERSFQLTQDVLEQAGILKKRSPYAELVTNEFLMK
Ga0134053_101971423300012406Grasslands SoilVIHLTGVKSVLPALDPDGRTSERSLQITQDVLEQAGLLKKRIPYAEVVNNDFLPR*
Ga0157349_102274113300012489Unplanted SoilLKPSMTTIKPDLLLTGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK*
Ga0157332_107313413300012511SoilKDGRTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK*
Ga0137358_1096429923300012582Vadose Zone SoilTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK*
Ga0137337_107302123300012675SoilAAAVLPALSKDGRTSERSFQVTQDILEQAGILKKRVAYAELVTNEFLMK*
Ga0157306_1015884413300012912SoilPPDLLLAGAAAVLPTLSSDGRVSERSFQTTQEILEQAGMLKKRVSYSELVTNEFLAK*
Ga0137396_1042774113300012918Vadose Zone SoilMTTIQPEILLAGVQAVRPALSKDGRTSERSVQVTQDILEQAGILKKRIAYADIVTNDFLMK*
Ga0137359_1034280233300012923Vadose Zone SoilGKTEPELLLAGVKAVLPALSPDGRTSERSVQVTQDILEQAGILKKRVPQSEIVTNEFLSK
Ga0137407_1059924113300012930Vadose Zone SoilTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0137407_1225742113300012930Vadose Zone SoilTSERSVQITQDVLEQAGILKKRVAYSEIVSNEFLAK*
Ga0126375_1071360423300012948Tropical Forest SoilNAVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0126369_1004233683300012971Tropical Forest SoilSERSVQVTQDILEQAGILKKRVTYADIVNNDFLMK*
Ga0126369_1174623513300012971Tropical Forest SoilSERSVQITQDILEQAGILKKRVAYSEVVTNEFLAK*
Ga0164308_1194596213300012985SoilTTIKPDLLWTGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLMK
Ga0164304_1127701623300012986SoilGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRLAYSDVVNNDFLLK*
Ga0180080_103776313300014870SoilPPDLLLSGVKSVLPALSLDGRTSERSFQVTQDVLEQAGILKKRAPYAELVTNEFLAK*
Ga0180095_108695123300014871SoilKTPPELLLAGAAAVLPALSKDGRTSERSFQVTQDILEQAGILKKRASYAELVTNEFLMK*
Ga0180074_102528133300014877SoilRTSERSFQVTQDILEQAGILKKRVAYAELVTNEFLMK*
Ga0180074_103437913300014877SoilTERSVQATQDILEVAGLLKKRAAYSDIVSNDYLPK*
Ga0157379_1222244823300014968Switchgrass RhizosphereVRAVLPSLSKDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK*
Ga0157376_1286569823300014969Miscanthus RhizosphereMSRVTRSTADENGRTSERSVQITQDVLEQAGILKKRAPFGELVSNDFLVK*
Ga0180073_108365613300015256SoilLSQDGRTTERSVQATQDILEVAGLLKKRAAYADIVSNEYLPK*
Ga0134073_1031302323300015356Grasslands SoilSQDGRTSERSAQITQDVLEQAGILKKRVPYAEIVSNEFLAK*
Ga0132256_10140832513300015372Arabidopsis RhizosphereQAVRPALSKDGRTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK*
Ga0132257_10090583533300015373Arabidopsis RhizosphereDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK*
Ga0132257_10294107113300015373Arabidopsis RhizosphereVRPALSKDGRSSERSVQVTQDILEQAGILKKRIAYGDIVTNDFLMK*
Ga0134083_1007300113300017659Grasslands SoilVLPALSSDGRTSERSFQVTQDILEQAGILKKRSPYAELVTNEFLMK
Ga0184634_1047563723300018031Groundwater SedimentLAALSPDGRTSERSVQSTQDMLEQAGLLKKRVPYSEVVNNDFLPK
Ga0184634_1048096513300018031Groundwater SedimentPPDLLLAGAASVLPALSPDGRTSERSFQVTQDILEQAGILKKRAPYAELVTNEFLAK
Ga0184637_1051916323300018063Groundwater SedimentFMAKTPPELLLAGAAAVLPTLSPDGRTSERSFQITQDILEQAGLLKKRVSYADLVTNEFLAK
Ga0184636_122711023300018068Groundwater SedimentELLLAGAAAVLPALSKDGRTSERSFQVTQDILEQAGILKKRVAYAELVTNEFLMK
Ga0184640_1054140123300018074Groundwater SedimentPAILLAGVKSTLPALSPDGRTTERGVQITQDVLEQAGILKRRVPYSDVVTNDFLPR
Ga0184632_1001148913300018075Groundwater SedimentLLLAGAAAVMPALSPDGRTSERSFQVTQDILEQAGILKKRSPYAELVTNEFLMK
Ga0184632_1005788633300018075Groundwater SedimentMAKIDPELLLSGAKSVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLS
Ga0187774_1117330823300018089Tropical PeatlandGVKAVLPTLSSDGRTSEKSVQITQDILEQAGILKKRAPYGELVSNDFLAK
Ga0190265_1039724733300018422SoilLLLAGAAAVLPALSPDGRTSERNFQVTQDILEQAGILKKRSPYAELVTNEFLSK
Ga0173481_1053026113300019356SoilDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK
Ga0137408_114875923300019789Vadose Zone SoilAKSVLPALSPDGRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK
Ga0210378_1024033323300021073Groundwater SedimentALSPDGRTSERSFQLTQDVLEQAGILKKRSPYAELVTNEFLMK
Ga0210384_1174654023300021432SoilSMGATAPDLLLTGVKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVAYSEIVTNEFLAK
Ga0212128_1027018623300022563Thermal SpringsNPDGRTTERSVQATQEILEVAGLLKKRVAYTEMVTNEFVPK
Ga0222623_1006648943300022694Groundwater SedimentLLAGAAAVLPALSPDGRTSERSFQLTQDVLEQAGILKKRSPYAELVTNEFLMK
Ga0222622_1018549713300022756Groundwater SedimentRTSERSFQTTQDILEQAGILKKRAPYAELVTNEFLSK
Ga0209824_1011130913300025173WastewaterFLGQTNPALLLAGAKAVLPALSPDGRTSERSVQNTQDMLEQAGLLKKRIPYSEVVNNDFLPK
Ga0209323_1051331213300025314SoilARSVVPALSPDGRTSERSFQVTQDILEQAGILKKRASYSELVTNEFLPK
Ga0207697_1016012823300025315Corn, Switchgrass And Miscanthus RhizosphereLSKDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK
Ga0209520_1046464923300025319SoilILLSGVKSLLSTLSPDGRTSERSVQTTQDVLEVAGLLKKRVGYSEIVSNEFLPK
Ga0207656_1057327623300025321Corn RhizosphereTGVRAVLPSLSKDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK
Ga0207680_1062939323300025903Switchgrass RhizosphereTIAPELLLAGVKAVLPTLSSDGRTSEKSVQITQDVLEQAGILKKRAPYAELVSNDFLAK
Ga0207707_1097378113300025912Corn RhizospherePELLLAGVQAVLPALSKDGRISERSVQVTQDILEQAGILKKRIAVADVATNDFLMK
Ga0207662_1076440013300025918Switchgrass RhizosphereIKPDLLLTGVRAVLPSLSKDGRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK
Ga0207694_1163002913300025924Corn RhizosphereRTSERSVQITQDILEQAGILKKRVAYSDVVNNDFLLK
Ga0207661_1099642423300025944Corn RhizosphereVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYSDVVNNDFLLK
Ga0207712_1202781013300025961Switchgrass RhizosphereGVQAVRPALSKDGRTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK
Ga0207640_1080733613300025981Corn RhizosphereTGVRAVLPALSKDGRTSERSVQVTQDILEQAGILKKRLAYSDVVNNDFLLK
Ga0209131_103702553300026320Grasslands SoilSDGRTSERSVQITQDILEQAGILKKRAPYSELVNNDFLLK
Ga0209803_100644073300026332SoilSVLPALSQDGRTSERSAQITQDVLEQAGILKKRVPYAEIVSNEFLAK
Ga0209804_127061513300026335SoilRTSERSVQITQDVLEQAGILKKRVAYSEIVSNEFLAK
Ga0208685_114218223300027513SoilVLPALSPDGRTSERSFQVTQDILEQAGILKKRAPYNELVTNEFLAK
Ga0207826_120059013300027680Tropical Forest SoilLAGVKAVLPALSNDGRMSERSVQITQDVLEQAGILKKRVPYGEIVNSNFLMK
Ga0209966_100660313300027695Arabidopsis Thaliana RhizosphereSGAAAVLPALNSDGRTSERSFQVTQDILEQAGILKKRAPYAELVNNEFLTK
Ga0209283_1018693533300027875Vadose Zone SoilDGVKAILPALTPDGRATERGLQLTQDVLEVAGLLKKRVAYSEIVSNDFLPK
Ga0209488_1086238023300027903Vadose Zone SoilPALSKDGRTSERSVQITQDILEQAGILKKRVVFSEIVTNDFLMK
Ga0209382_1081662813300027909Populus RhizosphereKDGRTSERSVQITQEILEQAGILKKRVGYSDIVNNDFLMK
Ga0209858_101251013300027948Groundwater SandTTEKSVQATQDVLEQAGLLKKRVAYGDIVSNEFLPK
Ga0307469_1111933813300031720Hardwood Forest SoilELLLAGVRAVLPALSPDGRTSERSVQVTQDILEQAGILKKRVPQSEIVTNEFLSK
Ga0307468_10231900613300031740Hardwood Forest SoilLTGVKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVAYSEIVTNEFLAK
Ga0307413_1084990023300031824RhizosphereAAAVQPTLNADGRTSERSFQTTQEILEQAGLLKKRVSYSELVTNEFLAK
Ga0310904_1090661223300031854SoilSDGRVSELSFQTTQEILEQAGMLKKRVSYSELVTNEFLAK
Ga0310916_1052683623300031942SoilDLLLTGVQAVLPALSKDGRTSERSVQVTQDILEQAGILKKRVAYADIVNNDFLMK
Ga0310885_1071414413300031943SoilLSSDGRVSERSFQTTQEILEQAGMLKKRVSYSELVTNEFLAK
Ga0310909_1063806913300031947SoilVKAVLPALSPDGRTSERSVQVTQDILEQAGILKKRVPQSEIVTNEFLSK
Ga0307479_1053797113300031962Hardwood Forest SoilSERSVQITQDILEQAGILKKRVAYSEIVTNEFLTK
Ga0307409_10077252423300031995RhizosphereTLNADGRTSERSFQTTQEILEQAGLLKKRVSYSELVTNEFLAK
Ga0315912_1032412413300032157SoilPTLSSDGRTSEKSFQITQDILEQAGILKKRAPYAELVNNDFLSK
Ga0307470_1099741913300032174Hardwood Forest SoilSERSVQITQDIHEQAGILKKRVAYSEVVTNEFLAK
Ga0307471_10029768933300032180Hardwood Forest SoilPFMAKTPPDLLLGGAAAVLPALSPDGRVSERAVQVTQDVLEQAGILKKRVPYTEIVTNNFLAK
Ga0307472_10053831523300032205Hardwood Forest SoilMGATAPDLLLTGVKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVAYSEVVTNEFLA
Ga0335082_1126211323300032782SoilDILLAGVKSVLPALSPDGRTSERSVQITQDILEQAGILKKRVAYPEIVTNEFLAK
Ga0335070_1189748923300032829SoilPALSSDGRTSERSVQITQDVLEQAGILKKRAPFGELVSNEFLAK
Ga0316626_1081573923300033485SoilALSSDGRTSERSVQVTQDILEQAGILKKRVAYSELVTNEFLPK
Ga0316624_1010638413300033486SoilPSMTTINPDLLLSGVRAVVPALSKDGRTSERSVQVTQDILEQAGILKKRVAYADVVTNDFLMK
Ga0316628_10290144413300033513SoilTTEKSVQATQDVLEQAGLLKKRVAYGDVVSNEFLPK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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