NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F038846

Metagenome / Metatranscriptome Family F038846

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F038846
Family Type Metagenome / Metatranscriptome
Number of Sequences 165
Average Sequence Length 69 residues
Representative Sequence LLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTE
Number of Associated Samples 47
Number of Associated Scaffolds 165

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.42 %
% of genes near scaffold ends (potentially truncated) 26.06 %
% of genes from short scaffolds (< 2000 bps) 81.82 %
Associated GOLD sequencing projects 47
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.788 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(70.909 % of family members)
Environment Ontology (ENVO) Unclassified
(70.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(79.394 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114
1JGI12272J11983_10943552
2JGI10213J12805_104976651
3Ga0068912_100165451
4Ga0070684_1023280371
5Ga0058697_100425381
6Ga0058697_100808662
7Ga0058697_106714501
8Ga0082029_12351901
9Ga0079218_133550151
10Ga0105679_100292972
11Ga0105679_100300771
12Ga0105679_109141232
13Ga0126307_100076777
14Ga0126307_100308716
15Ga0126307_100588005
16Ga0126307_100632412
17Ga0126307_100754802
18Ga0126307_100799781
19Ga0126307_101050251
20Ga0126307_102501613
21Ga0126307_103475161
22Ga0126307_103885592
23Ga0126307_104723552
24Ga0126307_106546202
25Ga0126307_106673162
26Ga0126307_109903491
27Ga0126307_111031921
28Ga0126307_111948301
29Ga0126313_100263844
30Ga0126313_101316351
31Ga0126313_101550554
32Ga0126313_102923551
33Ga0126313_104709241
34Ga0126313_105816321
35Ga0126313_106470911
36Ga0126313_108603813
37Ga0126313_108781552
38Ga0126313_109454672
39Ga0126313_110568502
40Ga0126313_111595191
41Ga0126313_118847902
42Ga0126305_100076404
43Ga0126305_100479262
44Ga0126305_100502513
45Ga0126305_100640641
46Ga0126305_100710782
47Ga0126305_100745552
48Ga0126305_101283681
49Ga0126305_101740312
50Ga0126305_102340931
51Ga0126305_102568852
52Ga0126305_106144241
53Ga0126305_111722551
54Ga0126305_112032931
55Ga0126304_101168144
56Ga0126304_104821471
57Ga0126304_107418171
58Ga0126304_111887511
59Ga0126315_100090331
60Ga0126315_100418142
61Ga0126315_101374691
62Ga0126309_100208423
63Ga0126309_100968042
64Ga0126309_101007712
65Ga0126309_101841944
66Ga0126309_101967682
67Ga0126309_102732142
68Ga0126309_102746862
69Ga0126309_103553811
70Ga0126309_104080492
71Ga0126309_104518201
72Ga0126309_108233421
73Ga0126309_111870051
74Ga0126309_112744291
75Ga0126308_100003958
76Ga0126308_100860194
77Ga0126308_101673262
78Ga0126308_102076802
79Ga0126308_102325102
80Ga0126308_112242951
81Ga0126312_100184364
82Ga0126312_100678671
83Ga0126312_100966543
84Ga0126312_101871872
85Ga0126312_103044952
86Ga0126312_106381551
87Ga0126312_108513692
88Ga0126312_110117141
89Ga0126312_110892991
90Ga0126312_112583581
91Ga0126312_113028601
92Ga0126314_100051701
93Ga0126314_100847683
94Ga0126314_102681892
95Ga0126314_102741691
96Ga0126314_103574452
97Ga0126314_103939101
98Ga0126314_104183731
99Ga0126314_104489971
100Ga0126314_106482352
101Ga0126314_106607592
102Ga0126314_108142842
103Ga0126314_111589952
104Ga0126314_112541861
105Ga0126310_100164246
106Ga0126310_100298781
107Ga0126310_100400634
108Ga0126310_100804673
109Ga0126310_100977642
110Ga0126310_101002752
111Ga0126310_101363431
112Ga0126310_104624371
113Ga0126310_105210632
114Ga0126310_115264511
115Ga0126310_116836731
116Ga0126311_100183413
117Ga0126311_100418411
118Ga0126311_100907354
119Ga0126311_101460222
120Ga0126311_102737992
121Ga0126311_103173923
122Ga0126311_104812222
123Ga0126311_106465031
124Ga0126311_108958632
125Ga0126306_100780981
126Ga0126306_100824044
127Ga0126306_101196581
128Ga0126306_110888881
129Ga0126306_111681571
130Ga0058701_107458611
131Ga0150985_1025241522
132Ga0182000_100174742
133Ga0182001_100191902
134Ga0190271_123814792
135Ga0193612_10317661
136Ga0193610_10251992
137Ga0193594_11138481
138Ga0190273_102877941
139Ga0190273_116762041
140Ga0193604_10114732
141Ga0190264_103310933
142Ga0190264_110527701
143Ga0190267_111532151
144Ga0190267_115885932
145Ga0196959_100297091
146Ga0214467_10168171
147Ga0209574_103720621
148Ga0307276_100108483
149Ga0307318_101748711
150Ga0307318_103673702
151Ga0268240_101253391
152Ga0268240_101356671
153Ga0268259_100743601
154Ga0308205_10625222
155Ga0308201_101980331
156Ga0307406_116109361
157Ga0307409_1003506321
158Ga0307409_1005417713
159Ga0307409_1009769941
160Ga0307409_1012138531
161Ga0307414_107522932
162Ga0307411_123226381
163Ga0307415_1013762281
164Ga0307415_1025763251
165Ga0334905_076016_308_520
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.21%    β-sheet: 0.00%    Coil/Unstructured: 75.79%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065LLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTESequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
41.2%58.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Serpentine Soil
Termite Nest
Agricultural Soil
Soil
Soil
Soil
Corn Rhizosphere
Soil
Soil
Avena Fatua Rhizosphere
Rhizosphere
Agave
Agave
7.3%70.9%3.6%5.5%3.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12272J11983_109435523300000750SoilTSEITSSAHSGERVD*RRNRREGENLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE*
JGI10213J12805_1049766513300000858SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDEPDTPEPTDPSDPLDDPGTIDTE*
Ga0068912_1001654513300005506SoilLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE*
Ga0070684_10232803713300005535Corn RhizosphereVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKEQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0058697_1004253813300005562AgaveRREGENALLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGTIGTE*
Ga0058697_1008086623300005562AgaveVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDSPEAADPSDPGTIGTE*
Ga0058697_1067145013300005562AgaveLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLAPHPPEDERDTPEPTDPSDPGTIGTE
Ga0082029_123519013300006169Termite NestLVHRGFISAVIVVAIVQEKGNEGKVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDTPKPPDPSDPGTIGSE*
Ga0079218_1335501513300007004Agricultural SoilNQREGENALLPEDQQLLSDQQLRDASFEQLQDLNARLDLLLRSKGQPGLALHPPEDERDTPAPTDPSDPGTIGSE*
Ga0105679_1002929723300007790SoilLLPEDQQLLTDQQLRDASYEQLQDLIARIDLLLRSKGQPGLTLRPPEDERDAPEPSDPADPRAE*
Ga0105679_1003007713300007790SoilLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLTLHPPENGRDTPEPADPSDSGTIGSE*
Ga0105679_1091412323300007790SoilMLPDDQQLLTDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHAPEPSDPADPSAG*
Ga0126307_1000767773300009789Serpentine SoilMPMLPDDQQLLTDKQLRDASDEQVQDLIARLDLLLRSKGQPGLTTRSPEEPRHIPETSDPADPGAG*
Ga0126307_1003087163300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARIDLLLRSKGQAGLTLPLPEGGRDAPGPTDPLDPGTIGSE*
Ga0126307_1005880053300009789Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGTE*
Ga0126307_1006324123300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLPPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126307_1007548023300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126307_1007997813300009789Serpentine SoilLLPEDQQLLSDQQLRDASDDQLQDLIARVDLLLRSKGQSGLTLHSSEDERDTPEATDLSDPLDPGTIGTE*
Ga0126307_1010502513300009789Serpentine SoilLLPEDQQLLSDQQFRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEGERDIPEPTDPSDPRGDPGTIGTE*
Ga0126307_1025016133300009789Serpentine SoilLLPDDQQLLSDQQLRDASEEQLQDLIARIDLLLRSKGQPGLTLHPPEDEGDTPEPADPSDPGTIGTE*
Ga0126307_1034751613300009789Serpentine SoilVLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQAGLTLHPPEDARDTPEPTDPAD
Ga0126307_1038855923300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPKDERNTPEPTDPSDPGSIGAE*
Ga0126307_1047235523300009789Serpentine SoilVITVLPDDQQLLSDEQLQDLIARLDLLLRSKGQPGLALHPPEDEFATPEPTDPSDPREDPGTIGAE*
Ga0126307_1065462023300009789Serpentine SoilVRTLLPDDQRLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLAVHPPEDERGTPEPTDPSDPREDPGTIGSE*
Ga0126307_1066731623300009789Serpentine SoilDEGTEGKVRTLLPDDQQLLSDQQLRDTSEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE*
Ga0126307_1099034913300009789Serpentine SoilTLLPEDQRLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGTIGGE*
Ga0126307_1110319213300009789Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVELLLRSKGRPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126307_1119483013300009789Serpentine SoilLLSDQQLRDASFEQLQDLIARLDLLLRSKGQPGLALHPPEDEDDTPEPADPADPGTIGGE
Ga0126313_1002638443300009840Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHTPEDERDTPGPYDPSDPGTIGTE*
Ga0126313_1013163513300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE*
Ga0126313_1015505543300009840Serpentine SoilLLPDDQQLLSDQQLRVASDEQLQDLIARVDLLLRSKGQTGLTLHPPEDGRDAPESTDPSDPGTIGTE*
Ga0126313_1029235513300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126313_1047092413300009840Serpentine SoilTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126313_1058163213300009840Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGAIGSE*
Ga0126313_1064709113300009840Serpentine SoilLLPDEQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTTRRPPEDQRDTLEPADPSDLGTIGSE*
Ga0126313_1086038133300009840Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126313_1087815523300009840Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLHPPEDEGETPKPADTSDPGTIGTE*
Ga0126313_1094546723300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126313_1105685023300009840Serpentine SoilMGKLTKEPKGGRTLLPEDQQLLTDQQLRDASYEQLQDLIARLDLLLRSKGQPGLTLHRPEDPEPTDPADPGAG*
Ga0126313_1115951913300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPKDERNTPEPTDPSDPGTIGAE*
Ga0126313_1188479023300009840Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEDEDDTPEPADPADPG
Ga0126305_1000764043300010036Serpentine SoilVRTLLPEDQQLLSDQQLRDASDDQLQDLIARVDLLLRSKGQSGLTLHSSEDERDTPEPTDPSDPLDPGTIGTE*
Ga0126305_1004792623300010036Serpentine SoilVLPDDQQLLSDEQLQDLIARLDLLLRSKGQPGLALHPPEDEFATPEPTDPSDPREDPGTIGAE*
Ga0126305_1005025133300010036Serpentine SoilMLPDDQQLLTDKQLREASDEQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHGPEPSGPADPADPADPGVG*
Ga0126305_1006406413300010036Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQAGITLHPPEDARDTPPEPTDPADPLEDPGTIGSE*
Ga0126305_1007107823300010036Serpentine SoilLLPDDQRLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLAVHPPEDERGTPEPTDPSDPREDPGTIGSE*
Ga0126305_1007455523300010036Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDTPKPPDPSDPGTIGSE*
Ga0126305_1012836813300010036Serpentine SoilDQQLLSDQQLRDASEEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGSE*
Ga0126305_1017403123300010036Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSPEDERDTPEPTDTSDPGTIGSE*
Ga0126305_1023409313300010036Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126305_1025688523300010036Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQSGLTLHPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126305_1061442413300010036Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEDGRGTPEPADPSDPGTIGTE*
Ga0126305_1117225513300010036Serpentine SoilPDDQQLLSDQQLRDASDEQLQDLIARVELLLRSKGRPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126305_1120329313300010036Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLALHPPKDERGTPGPSDPSDPLEDPG
Ga0126304_1011681443300010037Serpentine SoilVRTLLPDDQQLLSDQQLRDTSEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE*
Ga0126304_1048214713300010037Serpentine SoilEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSPEDERDTPEPTDTSDPGTIGSE*
Ga0126304_1074181713300010037Serpentine SoilVRTLLPHNQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALEPPGDERATPEPTDPSDPREDPGTIGAE*
Ga0126304_1118875113300010037Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHPPEDGRDTPGPTDPSDPGTIGSE*
Ga0126315_1000903313300010038Serpentine SoilMLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLDPPEDERNTPEPTDPSEPLDPGTIGTE*
Ga0126315_1004181423300010038Serpentine SoilMLLPDDQQLLSDQPLRDASDEQLQDLIARIDLLLRSMGQPGLALHPPEDERDTPEPAGPSNPGTIGTE*
Ga0126315_1013746913300010038Serpentine SoilQQLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLALHPPKDERGTPGPSDPSDPLEDPGTIGTE*
Ga0126309_1002084233300010039Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDERDTPEPDDLSDPGTIGTE*
Ga0126309_1009680423300010039Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLRPPEDARDIPEPTDPSDPLDDPGTIGTE*
Ga0126309_1010077123300010039Serpentine SoilLLDEDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALPPPENGRGTPEPADPSDPGTIGTE*
Ga0126309_1018419443300010039Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDAPEPDDPSDPGTIGTE*
Ga0126309_1019676823300010039Serpentine SoilMGRLRKEGKVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQTGLTLHPPEDGRDAPESTDPSDPGT
Ga0126309_1027321423300010039Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHTPADERDTPEPYDRPDPGTIGTK*
Ga0126309_1027468623300010039Serpentine SoilLLPDEEQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTTRRPPEDQRDTLEPADPSDLGTIGSE*
Ga0126309_1035538113300010039Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126309_1040804923300010039Serpentine SoilLLPDDQRLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLMLHPPEDERDTPKPADPPDPGTIGSE*
Ga0126309_1045182013300010039Serpentine SoilMPMLPDDQQLLTDDQLRDASDDQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHAPEPSDPADPSAG*
Ga0126309_1082334213300010039Serpentine SoilMLPDDQQLLTDEQLRDASDQQLQDLIARLDLLLRTKGQPGLTTRSPEEPPHAPETSDPADPADPGAGG*
Ga0126309_1118700513300010039Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVNLLLRSKGRPGLTLHSPEDERDTPEPTDPSNPLEDPGTIGTE*
Ga0126309_1127442913300010039Serpentine SoilDDQQLLSDQQLRDASEEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGSE*
Ga0126308_1000039583300010040Serpentine SoilMPMLPDDQQLLTDKQLREASDEQLQGLIARLDLLLRSKGQPGLTTRSPEDQRRHGPEPSGPADPADPAGPGVG*
Ga0126308_1008601943300010040Serpentine SoilMGRLTKETEGKLRMLLPEDQQLLSDQQLKDASDEQLQDLIPRLDLLLRSKGQPGLALHPPEDERATPEPTDPSDPGTIGTE*
Ga0126308_1016732623300010040Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPENGRGTPEPADPSDPGTIGSE*
Ga0126308_1020768023300010040Serpentine SoilLLPEDQQLLTDQQLRDASDEQLQDLIARVDLLLRSKGHPGLTLHRPEDERETPQPTDPSDPGAE*
Ga0126308_1023251023300010040Serpentine SoilMLLPDDQRLLSDKQLRDAPEEQLQDLIARLDLLLWSKGRPGLTLHAPEDERDTPEPTDPSDPGTIGTE*
Ga0126308_1122429513300010040Serpentine SoilLLADDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDGRDTPEPADPSDPGTIGTE*
Ga0126312_1001843643300010041Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIACLDLLMRSKGQPGLALHPPKDERDTPKPTDPSDPGTIGTE*
Ga0126312_1006786713300010041Serpentine SoilLLPEDQQLLTDQQLRDASHEQLQDLIARVDLLLRSKGQPGLTLHTPEDERGIPEPTDPAGPGAE*
Ga0126312_1009665433300010041Serpentine SoilLLPADQQLLSDHQLRDASEEQLQDLIARIDLLLRSKGQPGLTLHPPEDEGDTPEPADPSDPGTIGTE*
Ga0126312_1018718723300010041Serpentine SoilVRTLLPDDQQLLSDQQLRDATDEQLQDLIARVDLLLRSKGQPGLALHPPEDERDTPEPDDLSDPGTIGTE*
Ga0126312_1030449523300010041Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126312_1063815513300010041Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSQGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126312_1085136923300010041Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEEERDTPEPTDASVPLDPGTVGSE*
Ga0126312_1101171413300010041Serpentine SoilGKVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126312_1108929913300010041Serpentine SoilQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE*
Ga0126312_1125835813300010041Serpentine SoilTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLAVHPPEDERGTPEPTDPSDPGTIGTE*
Ga0126312_1130286013300010041Serpentine SoilLLPEDQQLLTDQRLRDASEEQLQDLIARVDLLLRSKGQPGLTLHRPEDERETPQPTDPSDPGAE*
Ga0126314_1000517013300010042Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLALHPPEDERDTPEPTDPSDPGTIGTE*
Ga0126314_1008476833300010042Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDTPEPTDPSDPLDQGTIGTE*
Ga0126314_1026818923300010042Serpentine SoilMLLPDDQQLLSDQQLRDASDEQLQDLIARIDLLLRSKGQPGLTLDPPEDERNTPEPTDPSEPL
Ga0126314_1027416913300010042Serpentine SoilRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126314_1035744523300010042Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLNSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126314_1039391013300010042Serpentine SoilLLPENEQLLSDQELRDASEEQLQDLIARLDLLMRSKGQRGLAVHPPDEDERGTPEPTDPSDPREDPGTIGAE*
Ga0126314_1041837313300010042Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLRLHPPEEERDPPEPTDASDPLDPGTIGSE*
Ga0126314_1044899713300010042Serpentine SoilLLPDDQQLLSDKQLRDASEEQLQDLIVRLDLLLRSKGQPGLALHPPEDERDTPEPADPSDPGTIGSE*
Ga0126314_1064823523300010042Serpentine SoilLLPEDQQLLTDQRLRDASEEQLQDLIARVDLLLRSKGQPGLTLRCPEDEHETPEPMDPADPGAE*
Ga0126314_1066075923300010042Serpentine SoilLLPEDQQLLSDQQLRGASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDTLEATDPSHPLDPGTIGTE*
Ga0126314_1081428423300010042Serpentine SoilDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPEDGRGTPEPADPSDPGTIGTE*
Ga0126314_1115899523300010042Serpentine SoilLLPDDQQLLSDQQLRDASFEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGSE*
Ga0126314_1125418613300010042Serpentine SoilTEGKVRTVLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHTPEDERDTPGPTDPADPLEDPGTIGSE*
Ga0126310_1001642463300010044Serpentine SoilMLPDDQQLLTDKQLSDASDEQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHAPEPSDPADPSAG*
Ga0126310_1002987813300010044Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPEDERDTPEPTDPSD
Ga0126310_1004006343300010044Serpentine SoilLLPEDQQLLTDQQLRDASEEQLQNLIARVDLLLRSKGQPGLTLHRPEDPEPTDPADPGAE
Ga0126310_1008046733300010044Serpentine SoilMLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQAGLTLHPPEDARDTPEPTDPADPLEDPGTIGSE*
Ga0126310_1009776423300010044Serpentine SoilMLPDDQQLLTEKQLREASDEQLQDLIARLDLLLRSKGQPGLTTRSPEDQRRHGPEPSDPADPGVG*
Ga0126310_1010027523300010044Serpentine SoilVRTLLPDDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLYPPEDERDTPGPTDPSDPGTIGTE*
Ga0126310_1013634313300010044Serpentine SoilLLPDDEQLLSEQQLRDASEEQLQDLIARLDLLLRSKGQPGLALRPPEDERDTPEPADPSDPGTIGSE*
Ga0126310_1046243713300010044Serpentine SoilLLPEDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGRPGLALRPPEDERDTPEPADPSDPGTIGTE*
Ga0126310_1052106323300010044Serpentine SoilLLPEDQQLLTDQQLRDASYEQLQDLIARLDLLLQSKGQPGLTLHRPEDPEPTDPADPGAG
Ga0126310_1152645113300010044Serpentine SoilMGKLTKEPKGGRTLLPEDQQLLTDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTRRPPEDERDTPEPTDPADPGAE*
Ga0126310_1168367313300010044Serpentine SoilQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTE*
Ga0126311_1001834133300010045Serpentine SoilMLPDDQQLLTDKQLREASDEQLQGLIARLDLLLRSKGQPGLTTRSPEDQRRHGPEPSDPADPGVG*
Ga0126311_1004184113300010045Serpentine SoilLLPEDQQLLTDQQLRDASYEQLQDLIARLDLLLRSKGQPGLTLHRPEDPEPTDPADPGAG
Ga0126311_1009073543300010045Serpentine SoilLLPEDQQLLTDQQLRDASHEQLQDLIACVDLLLRSKGQPGLTLHTPEDERGIPEPTDPAGPGAE*
Ga0126311_1014602223300010045Serpentine SoilLLPDDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGQPGLALRPPEDERDTPEPADPSDPGTIGSE*
Ga0126311_1027379923300010045Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQAGLTLHPPEDARDTPEPTDPADPLEDPGTIGSE*
Ga0126311_1031739233300010045Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPAD
Ga0126311_1048122223300010045Serpentine SoilSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLNSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126311_1064650313300010045Serpentine SoilLLPEDQQLLTDQQLRDASDEQLQDLIARVDLLLRSKGHPGLTLHRPEDERYTPQPTDPSDPGAE*
Ga0126311_1089586323300010045Serpentine SoilVRTLLPEDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGRPGLALRPPEDERDTPEPADPSDPGTIGTE*
Ga0126306_1007809813300010166Serpentine SoilLLPEDQRLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEP
Ga0126306_1008240443300010166Serpentine SoilVRTLLPEDQQLLSDQQHRDASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126306_1011965813300010166Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEP
Ga0126306_1108888813300010166Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126306_1116815713300010166Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPREDERGTPEPTDPSDPRDPGTIGTE*
Ga0058701_1074586113300010395AgaveQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGIIGTE*
Ga0150985_10252415223300012212Avena Fatua RhizosphereVRTLLPDDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGQPGLRLDLPEDEPDIPEPTDPSDPRGDPGTIGSE*
Ga0182000_1001747423300014487SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQLGLTLRPPEDEPDTPEPTDPADPGTIGTE*
Ga0182001_1001919023300014488SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHAPEDERDTPDPADPSDPGTIGSE*
Ga0190271_1238147923300018481SoilQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDEPDIPEPTDPSDPLDDPGTIDTE
Ga0193612_103176613300018757SoilRNRREGENLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0193610_102519923300018891SoilLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0193594_111384813300018914SoilNLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0190273_1028779413300018920SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLRPPEDAPDIPEPTDPSDPLDDPGTIGTE
Ga0190273_1167620413300018920SoilLLPEDQQLLTDQQLRDASYEQLQDLIARVDLLLRSKGQPGLTLHPPEDPEPTDPADPGAE
Ga0193604_101147323300019132SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0190264_1033109333300019377SoilVRTLLPDDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLTLHAPKDERDTPEPADPADPGTIGSE
Ga0190264_1105277013300019377SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDARDLPEPPN
Ga0190267_1115321513300019767SoilVRRLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLRLHPPEEERHTPEPTDASDPLDPGTIGSE
Ga0190267_1158859323300019767SoilVRTLLPEDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGQPGLALRPPEDERDTPEPTDPSDPREDPGTIGTE
Ga0196959_1002970913300021184SoilGENALLPEDQQLLSDQQLRDASFEQLQDLIARLDLLLRSKGQPGLTLHPPEDGRDTPEPADPADPGTTGTG
Ga0214467_101681713300027075SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDEPDIPEPTD
Ga0209574_1037206213300027809AgaveVRTLLPEDQQLLSDQQLRDASFEQLQDLIARLDLLLRSKGQPGLALHQPKDERDTPEPADPADPGTIGSE
Ga0307276_1001084833300028705SoilLLTDQRLRDASEEQLQDLIARVGLLLRSKGQPGLMLRRPEDEHETPEPMDPADPGAE
Ga0307318_1017487113300028744SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLHPPEDERDTPEPTDTSDPRDPGTIGTE
Ga0307318_1036737023300028744SoilLLPEDQQLLTDQQLRDASDKQLQDLIARVDLLLRSKGQPGLTLRPPEDERETPEPTDPSDPGAE
Ga0268240_1012533913300030496SoilSDQQLRDASEEQLQDLIARLYLLMRSKGQPGLALHPPKDERGTPEPADPSDPREDPGTIGSE
Ga0268240_1013566713300030496SoilTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLHPPEDERDSPDPAEPSDPGTIGSE
Ga0268259_1007436013300030499AgaveQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGTIGTE
Ga0308205_106252223300030830SoilLLPDDQQLLSDKQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEDERNTPEPADPSDPGTIGSE
Ga0308201_1019803313300031091SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE
Ga0307406_1161093613300031901RhizosphereLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTE
Ga0307409_10035063213300031995RhizosphereLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGTIGTE
Ga0307409_10054177133300031995RhizosphereLLPEDQQLLSNQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE
Ga0307409_10097699413300031995RhizosphereVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE
Ga0307409_10121385313300031995RhizosphereLLPDDQQLLSDQQLRDASFEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPTDPADPGTIGSE
Ga0307414_1075229323300032004RhizosphereVRTLLPENEQLLSDQELRDASEGQLQDLIARLDLLMRSKGQRGLAVHPPDEDERGTPEPTDPSDPREDPGTIGAE
Ga0307411_1232263813300032005RhizosphereVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE
Ga0307415_10137622813300032126RhizosphereVRTLLPEDQQLLSNQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE
Ga0307415_10257632513300032126RhizosphereVRTLCYPQRSAAPLSDQQLRHASEEQLQDLIARIDLLLRSKGQPGLTLHPPEDERDTPEPADPADPGT
Ga0334905_076016_308_5203300034687SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEGERDTPEPTDPADPGTIGSE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.