NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F038609

Metagenome / Metatranscriptome Family F038609

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F038609
Family Type Metagenome / Metatranscriptome
Number of Sequences 165
Average Sequence Length 68 residues
Representative Sequence MELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Number of Associated Samples 135
Number of Associated Scaffolds 165

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.70 %
% of genes near scaffold ends (potentially truncated) 32.12 %
% of genes from short scaffolds (< 2000 bps) 83.03 %
Associated GOLD sequencing projects 124
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.394 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(13.333 % of family members)
Environment Ontology (ENVO) Unclassified
(24.242 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.818 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.
1ICChiseqgaiiDRAFT_08356314
2ICChiseqgaiiDRAFT_08365712
3JGI10216J12902_1060918451
4Ga0062590_1016276962
5Ga0063356_1002879274
6Ga0063356_1036522601
7Ga0066674_100382352
8Ga0066683_106101412
9Ga0066690_104290071
10Ga0066688_105173451
11Ga0066678_100176582
12Ga0065704_105445712
13Ga0065715_104339202
14Ga0070690_1008442012
15Ga0070680_1000422402
16Ga0070687_1001250341
17Ga0070692_103028711
18Ga0070669_1002258531
19Ga0070703_100540082
20Ga0070703_102183432
21Ga0070705_1001041502
22Ga0070694_1001311292
23Ga0070694_1006145482
24Ga0066686_101627481
25Ga0066686_108321662
26Ga0066686_110713851
27Ga0070681_103413052
28Ga0070707_1012053982
29Ga0070697_1012545091
30Ga0070696_1009008391
31Ga0070704_1002939391
32Ga0066695_104228621
33Ga0066695_106612872
34Ga0066707_109309651
35Ga0066707_109340532
36Ga0066704_105557122
37Ga0066698_103056853
38Ga0066698_108336631
39Ga0070664_1014120051
40Ga0066694_104550162
41Ga0068870_105028962
42Ga0075417_101496471
43Ga0075417_104719101
44Ga0075417_106282292
45Ga0066659_113406422
46Ga0075428_1001446252
47Ga0075430_1016604882
48Ga0075420_1009910442
49Ga0079217_100155463
50Ga0079217_100905852
51Ga0079217_116754332
52Ga0079216_100303672
53Ga0075419_103942572
54Ga0079218_105219051
55Ga0079218_127035482
56Ga0066710_1001180985
57Ga0105240_119555282
58Ga0066709_1027913482
59Ga0114129_1000540011
60Ga0105243_102500232
61Ga0105249_108507842
62Ga0105056_10146412
63Ga0105061_10349742
64Ga0105057_11137322
65Ga0105072_11114052
66Ga0105085_11274511
67Ga0134064_104287192
68Ga0134071_100323962
69Ga0134122_101284765
70Ga0137312_10260452
71Ga0137365_109901732
72Ga0137399_103902332
73Ga0137399_104887022
74Ga0137374_1000030524
75Ga0137374_1002332512
76Ga0137374_104423172
77Ga0137374_104503662
78Ga0137362_100999352
79Ga0137380_101856481
80Ga0137380_103412653
81Ga0137367_108702401
82Ga0137369_100824982
83Ga0137369_101197193
84Ga0137369_108271902
85Ga0137368_104779112
86Ga0137375_107014322
87Ga0137361_116890012
88Ga0137394_100151462
89Ga0134075_101310732
90Ga0157377_100834864
91Ga0132258_123927192
92Ga0134074_12766662
93Ga0184610_10108814
94Ga0184604_100584632
95Ga0184605_100615063
96Ga0184605_101789612
97Ga0184608_100157134
98Ga0184608_102103151
99Ga0184620_101823092
100Ga0184638_11241462
101Ga0184626_101016302
102Ga0184621_101757402
103Ga0184623_105268882
104Ga0184618_100906493
105Ga0184618_101232872
106Ga0184632_104173052
107Ga0184609_100810422
108Ga0184609_101998361
109Ga0184612_101534082
110Ga0184627_106513351
111Ga0190272_106771142
112Ga0066655_103198292
113Ga0066662_114017922
114Ga0190270_130747301
115Ga0066669_105357792
116Ga0173479_102374832
117Ga0193715_10470692
118Ga0193739_10922032
119Ga0210378_102709672
120Ga0210382_100540041
121Ga0210382_102149212
122Ga0193719_100155342
123Ga0193736_10352722
124Ga0224452_10786222
125Ga0222623_101522841
126Ga0222622_106219752
127Ga0207653_100041522
128Ga0207707_116691942
129Ga0207660_103426012
130Ga0207646_119050542
131Ga0207709_103337711
132Ga0207679_117008402
133Ga0207639_120837972
134Ga0207698_112214541
135Ga0209438_11514162
136Ga0209468_11073142
137Ga0209470_11389332
138Ga0209968_10526751
139Ga0209887_11162411
140Ga0209818_10254123
141Ga0209387_10489462
142Ga0209117_10022343
143Ga0209814_100291414
144Ga0209814_103695212
145Ga0209814_104895852
146Ga0209481_1000201710
147Ga0209486_102151392
148Ga0209486_104987712
149Ga0209486_110186432
150Ga0209382_117765702
151Ga0137415_113552811
152Ga0307307_101789832
153Ga0307282_101656642
154Ga0307287_100215242
155Ga0307292_100585322
156Ga0307312_101866213
157Ga0307277_100171034
158Ga0307308_101348622
159Ga0308187_104274871
160Ga0310813_112093402
161Ga0326597_102780373
162Ga0307471_1005665861
163Ga0214472_117809082
164Ga0364934_0425213_10_213
165Ga0364936_064237_236_439
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 49.47%    β-sheet: 0.00%    Coil/Unstructured: 50.53%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGFSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Groundwater Sand
Sediment
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
10.9%10.3%11.5%6.7%13.3%3.6%7.3%3.6%7.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_083563143300000033SoilMHNGGYGRRRRRKAGTMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
ICChiseqgaiiDRAFT_083657123300000033SoilMELVFFGGALVVLDVLAYFFGYDSREARALDHHDRALEAIRRGQFDVYSHELAQIERKMLKDGWPGF*
JGI10216J12902_10609184513300000956SoilMELAFFAGALVVLDVLAYFFGYDSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDAWPGF*
Ga0062590_10162769623300004157SoilMELIVLGGAFVVLDVLAYFFGYDSREAKALDHHDRALEAIRRGQFDVYSHELAQIERKMLKDAWPGF*
Ga0063356_10028792743300004463Arabidopsis Thaliana RhizosphereMVTPEGKVAKMELIVLGGAFVVLDVLAYFFGYDSREAKALDHHDRALEAIRRGQFDVYSHELAQIERKMLK
Ga0063356_10365226013300004463Arabidopsis Thaliana RhizosphereMELLIFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAARRGQFDVYSHELAQIERKML
Ga0066674_1003823523300005166SoilMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF*
Ga0066683_1061014123300005172SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0066690_1042900713300005177SoilLDVLAYFFGYDSREASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0066688_1051734513300005178SoilEAVDMELVIFGGALVVLDVLAYFFGYDSREASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0066678_1001765823300005181SoilMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIDAIRRGQFDTYSHELAQFERKILKDVWPGF*
Ga0065704_1054457123300005289Switchgrass RhizosphereMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0065715_1043392023300005293Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070690_10084420123300005330Switchgrass RhizosphereMELVLFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070680_10004224023300005336Corn RhizosphereLGHGKAGTMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF*
Ga0070687_10012503413300005343Switchgrass RhizosphereMELVLFAGALVVLDVAAYFVGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070692_1030287113300005345Corn, Switchgrass And Miscanthus RhizosphereGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0070669_10022585313300005353Switchgrass RhizosphereHGKAGTMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070703_1005400823300005406Corn, Switchgrass And Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALKAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070703_1021834323300005406Corn, Switchgrass And Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWRGF*
Ga0070705_10010415023300005440Corn, Switchgrass And Miscanthus RhizosphereMVTAIGHGKAGTMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070694_10013112923300005444Corn, Switchgrass And Miscanthus RhizosphereMELLAFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0070694_10061454823300005444Corn, Switchgrass And Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGHDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWRGF*
Ga0066686_1016274813300005446SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFER
Ga0066686_1083216623300005446SoilCQRWLRHPHGEAVEMELVIFGGALVVFDVLAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF*
Ga0066686_1107138513300005446SoilMELMIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFER
Ga0070681_1034130523300005458Corn RhizosphereMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF*
Ga0070707_10120539823300005468Corn, Switchgrass And Miscanthus RhizosphereMELMLFAGALVVLDVLAYFFGADSREASALDHHDRALEAVRRGQFDVYSHELAQIEREMLKG
Ga0070697_10125450913300005536Corn, Switchgrass And Miscanthus RhizosphereVVTAISDRKAGTMELLAFAGALVVLDVAAYFFGYDSRESGALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF*
Ga0070696_10090083913300005546Corn, Switchgrass And Miscanthus RhizosphereLDVAAYFFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0070704_10029393913300005549Corn, Switchgrass And Miscanthus RhizosphereRHGKAGTMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF*
Ga0066695_1042286213300005553SoilMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFER
Ga0066695_1066128723300005553SoilMELMIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0066707_1093096513300005556SoilVVMCQRWLRHPHGEAVEMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF*
Ga0066707_1093405323300005556SoilRWLRHPHGEAVEMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0066704_1055571223300005557SoilMELVIFGGALVVLDVLAYFFGYDSREASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0066698_1030568533300005558SoilMELVIFGGALVVLDVLAYFFGYDSRDMSALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVW
Ga0066698_1083366313300005558SoilMELLFFAGALVVLDVAAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF*
Ga0070664_10141200513300005564Corn RhizosphereGKAGTMELLVFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0066694_1045501623300005574SoilMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIDAIRRGQFDTYSHELAQFERKILKDVW
Ga0068870_1050289623300005840Miscanthus RhizosphereFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF*
Ga0075417_1014964713300006049Populus RhizosphereMELLIFGGALVILDVAAYFFGHNSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0075417_1047191013300006049Populus RhizosphereVTPRRHREAANMELVVFAGALVVLDVLAYLVGNDSRDASALDHHDRALDAIRRGDFDVYSDELAQIERKMLKDSWQGF*
Ga0075417_1062822923300006049Populus RhizosphereMELLAFAGALVALDVAAYFFGYDSRDSRALDHHDRALDAIRRGRFDAYSHELAQFERSILKDVWPGF*
Ga0066659_1134064223300006797SoilMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQF
Ga0075428_10014462523300006844Populus RhizosphereMELLIFGGALVILDVAAYFFGYNSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0075430_10166048823300006846Populus RhizosphereLDVAAYFFGYNSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0075420_10099104423300006853Populus RhizosphereMRKGTEMELLLFAGALVVLDVLAYFFGHDSREASALDHHDRALDAIRRGQFDAYSHELAQIERKMLKGNWPGF*
Ga0079217_1001554633300006876Agricultural SoilMVVYTKALKGGTEMELLIFGGALVILDVAAYFFGYDSRESSALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKDSWPGF*
Ga0079217_1009058523300006876Agricultural SoilMELVLFGGALVVLDVLAYFFGYNSRETSALDHHDRALEAARRGQFDVYSHELAQIERKMLKGSWPGF*
Ga0079217_1167543323300006876Agricultural SoilMELLLFGGALVVLDIAAYFFGYNSRESSALDHHDRALEAVRRGQFDVYSHELAQI
Ga0079216_1003036723300006918Agricultural SoilMELVLFGGALVVLDVLAYFFGYNSRESSALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKDSWPGF*
Ga0075419_1039425723300006969Populus RhizosphereMELLLFAGALVVLDVLAYFFGHDSREASALDHHDRALDAIRRGQFDAYSHELAQIERKMLKGNWPGF*
Ga0079218_1052190513300007004Agricultural SoilMELLVFAGALVVLDVAAYFFGYDSREANALDHHDRALEAIKRGQFDVYSYELAQIERKLLKDSWPGF*
Ga0079218_1270354823300007004Agricultural SoilMVVYTTTLKGGQKMELLVFISALVVLDVAAYFFGYDSREASALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKGSWPGF*
Ga0066710_10011809853300009012Grasslands SoilMELMIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF
Ga0105240_1195552823300009093Corn RhizosphereMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYRHELAQFERSILKDVWPGF*
Ga0066709_10279134823300009137Grasslands SoilMVTARHREAVDMELMIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0114129_10005400113300009147Populus RhizosphereMELVVFAGALVVLDVLAYLVGNDSRDASALDHHDRALDAIRRGDFDVYSDELAQIERKMLKDSWQGF*
Ga0105243_1025002323300009148Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRAIEAIRRGQFDAYRHELAQFERSILKDVWPGF*
Ga0105249_1085078423300009553Switchgrass RhizosphereMELLVFAGALVVLDVAAYFFGYDSREGRALAHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0105056_101464123300009801Groundwater SandMELLVFAGALVVLDVAAYLFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0105061_103497423300009807Groundwater SandVFAGALVVLDVAAYFFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0105057_111373223300009813Groundwater SandMELVLFAGALVVLDVLAYFFGYNSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0105072_111140523300009818Groundwater SandMELVFFAGALVVLDVLAYFFGYNSRETSALDHHDRALEAVRRGQFDVYSHELAQIERKMLNDSWPGF*
Ga0105085_112745113300009820Groundwater SandGKAADMELVLFAGALVVLDVLAYFFGYDSREASALDHHDRALDAVRRGQFDAYSYELAQIERKMLKDGWPGF*
Ga0134064_1042871923300010325Grasslands SoilFAGALVVLDVAAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF*
Ga0134071_1003239623300010336Grasslands SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWLGF*
Ga0134122_1012847653300010400Terrestrial SoilWLQPLGHGKAGTMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0137312_102604523300011400SoilMELLVFAGALVVLDVAAYFFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0137365_1099017323300012201Vadose Zone SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAEFERKILKDVWPGF*
Ga0137399_1039023323300012203Vadose Zone SoilMELVLFGGALVVLDVLAYFFGYDSRESSALDHHDRALEAIRRGQFDVYSHELAQIERKMLKDGWPGF*
Ga0137399_1048870223300012203Vadose Zone SoilMELMVFAGALVALDVMAYVFGHDSREASALDPHDRALEAIRRGDFDLYNEELALIERKMVKGSWPGF*
Ga0137374_10000305243300012204Vadose Zone SoilLEAEVELVLFLGALVALDLAANLLGYDSRDAAALRHHDRALDAVRRGQLDVYSHELGQIERELLKADRGF*
Ga0137374_10023325123300012204Vadose Zone SoilMVYITTLKGGAEMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGFYG*
Ga0137374_1044231723300012204Vadose Zone SoilMELVLFAGALVVLDVLACFVGFDSRDASALDHHDRALDAIRRGQFDAYSHELAQIERKMLKDSWPGF*
Ga0137374_1045036623300012204Vadose Zone SoilMELLAFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0137362_1009993523300012205Vadose Zone SoilMELLFFAGALVVLDVAAYFFGYDSRDAAALDHHDRAIDAIRRGQFDTYSHELAQFERKILKDVGPGF*
Ga0137380_1018564813300012206Vadose Zone SoilMELLFFAGALVVLDVAAYFFGYDSRDTSALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0137380_1034126533300012206Vadose Zone SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQYERKILKGVWPGF*
Ga0137367_1087024013300012353Vadose Zone SoilPYALTMVSWIAHHVNHRKRQQWLRRWRGKAAHVELMLFAGALVVLDVLACFVGFDSRDASALDHHDRALDAIRRGQFDAYNHELAQIERKMLKDSWPGF*
Ga0137369_1008249823300012355Vadose Zone SoilMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGFYG*
Ga0137369_1011971933300012355Vadose Zone SoilMELVLFAGALVVLDVLACFVGFDSRDASALDHHDRALDAIRRGQFDAFSHELAQIERKMLKDSWPGF*
Ga0137369_1082719023300012355Vadose Zone SoilMELVLFAGALVVLDVLAYFLGHDSTEASALDHHDRALDALRRGQFDVYSHELAQIERKMLKGDWPGF*
Ga0137368_1047791123300012358Vadose Zone SoilMELVLFAGALVVLDVLACFVGFDSRDASALDHHDRALDAIRRGQFDAYNHELAQIERKMLKDSWPGF*
Ga0137375_1070143223300012360Vadose Zone SoilMELLLFGGALVVLDVLAYFFGHDSREASALDHHDRALEAIRRGQFDVYSHELAQIERKMLKDSWPGF*
Ga0137361_1168900123300012362Vadose Zone SoilMELLFFAGALVVLDVAAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVGPGF*
Ga0137394_1001514623300012922Vadose Zone SoilMELLLFAGALVVLDVAAYFFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERAMLKDRWPGF*
Ga0134075_1013107323300014154Grasslands SoilHGEAVEMELVIFGGALVVLDVLAYFFGYDSRDMSALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF*
Ga0157377_1008348643300014745Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF*
Ga0132258_1239271923300015371Arabidopsis RhizosphereMELLFFVGALMVLDVAAYFVGYDSREASALDHHDRALEAIRRGKFDAYSHELAQFEREILKDVWPGF*
Ga0134074_127666623300017657Grasslands SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDLAIDAIRRGQFDAYSHELAQFERKILKDVWPGF
Ga0184610_101088143300017997Groundwater SedimentMELIVFAGALVVLDVLAYFFGYDSREAAALDHHDRALDAVQRGQFDVYSHELAQIERKMLKDSWPGF
Ga0184604_1005846323300018000Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDGRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184605_1006150633300018027Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184605_1017896123300018027Groundwater SedimentMELVVFAGALLVLDVLAYFFGYDSREASAQDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0184608_1001571343300018028Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAIRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0184608_1021031513300018028Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFE
Ga0184620_1018230923300018051Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSRENRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184638_112414623300018052Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184626_1010163023300018053Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGKFDAYSHELAQFERSILKDVWPGF
Ga0184621_1017574023300018054Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALDAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184623_1052688823300018056Groundwater SedimentMELLLFAGALVVLDVAAYFFGYDSRDASALDHHDRALDAIRRGQFDIYSHELAQIERKMLKDSWPGF
Ga0184618_1009064933300018071Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGKFDAYSHELAQFE
Ga0184618_1012328723300018071Groundwater SedimentMELLAFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184632_1041730523300018075Groundwater SedimentMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAIRRGQFDVYSHELAQ
Ga0184609_1008104223300018076Groundwater SedimentMVVTPTRVKGGAEMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0184609_1019983613300018076Groundwater SedimentRQLHRTPVCPLMVVYTIAVKGGAEMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAIRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0184612_1015340823300018078Groundwater SedimentMELLVFAGALVVLDIAAYFFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0184627_1065133513300018079Groundwater SedimentQGKADDMELVLFAGALVVLDVLAYFFGHDSREASALDHHDRALDAVQRGQFDVYSHELAQIERKMLKDSWPGF
Ga0190272_1067711423300018429SoilMELVFFAGALVVLDVLAYFFGYNSRETSALDHHDRAIEAVRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0066655_1031982923300018431Grasslands SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDTYSHELAQFERKILKDVWPGF
Ga0066662_1140179223300018468Grasslands SoilFAGALVVLDVAAYFFGYDSRDAAALDHHDRAIDAIRRGQFDTYSHELAQFERKILKDVWPGF
Ga0190270_1307473013300018469SoilMELIFFAGALVVLDVLAYFFGYDSRESKAVDHHDRALEAIRRGQFDVYSHELAQIERKMLKDGWQGF
Ga0066669_1053577923300018482Grasslands SoilMELLFFAGALVVLDVAAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF
Ga0173479_1023748323300019362SoilMELVLFAGALVVLDVAAYFVGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0193715_104706923300019878SoilMELLVFAGALVVLDVAAYFFGYDSRETRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0193739_109220323300020003SoilMELLVFAGALVVLDVAAYFFGYDSREASALDHHDRALEAVRRGQFDVYSHELAQIERKLLKDSWPGF
Ga0210378_1027096723300021073Groundwater SedimentMVVYITTLKGGAEMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0210382_1005400413300021080Groundwater SedimentVFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0210382_1021492123300021080Groundwater SedimentMELLLFAGALVVLDVAAYFFGYDSREASAQDHHDRALEAVRRGQFDVYSHELAQIERAMLKDSWPGF
Ga0193719_1001553423300021344SoilMELLVFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0193736_103527223300021412SoilMVVYIATLKGGAEMELLVFAGALVVLDVAAYFFGYDSRESSALDHHDRALEAVRRGQFDVYSHELAQIERKMLKDSWPGF
Ga0224452_107862223300022534Groundwater SedimentRRRKADTMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0222623_1015228413300022694Groundwater SedimentVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDTYSHELAQFERSILKDVWPGF
Ga0222622_1062197523300022756Groundwater SedimentLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0207653_1000415223300025885Corn, Switchgrass And Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWRGF
Ga0207707_1166919423300025912Corn RhizosphereMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF
Ga0207660_1034260123300025917Corn RhizosphereATVVTAIGHGKAGTMELLVFAGALVVLDVAAYFFGYDSREERALDHHDRALEAIRRGRFDAYSHELAQFERSILKDVWPGF
Ga0207646_1190505423300025922Corn, Switchgrass And Miscanthus RhizosphereMGCHGGYTDRGRKAADMELMLFAGALVVLDVLAYFFGADSREASALDHHDRALEAVRRGQFDVYSHELAQIEREMLKG
Ga0207709_1033377113300025935Miscanthus RhizosphereMELLVFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSIL
Ga0207679_1170084023300025945Corn RhizosphereMELVLFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSI
Ga0207639_1208379723300026041Corn RhizosphereVVLDVAAYFFGYDSREERALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0207698_1122145413300026142Corn RhizosphereLVLFAGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0209438_115141623300026285Grasslands SoilMELLVFAGALVVLDVAAYFFGYDSRETRALDHHDRALEAIRRGQFDAYSHELAQF
Ga0209468_110731423300026306SoilMELVIFGGALVVLDVLAYFFGYDSRDAAALDHHDRAIEAIRRGQFDTYSHELAQFERKILKDVWPGF
Ga0209470_113893323300026324SoilMELVIFGGALVVLDVLAYFFGYDSRDASALDHHDRAIDAIRRGQFDAYSHELAQFERKILKDVWPGF
Ga0209968_105267513300027526Arabidopsis Thaliana RhizosphereADMELVYFAGALVVLDVLAYFFGYDSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDAWPGF
Ga0209887_111624113300027561Groundwater SandMELVFFAGALVVLDVLAYFFGYNSRETSALDHHDRALEAVRRGQFDVYSHELAQIERKMLNDSWPGF
Ga0209818_102541233300027637Agricultural SoilMVVYTKALKGGTEMELLIFGGALVILDVAAYFFGYDSRESSALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKDSWPGF
Ga0209387_104894623300027639Agricultural SoilGGALVILDVAAYFFGYDSRESSALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKDSWPG
Ga0209117_100223433300027645Forest SoilMELMLFAGALVALDVMAYFFGHDSREASALDHHDRALEAIRRGDFDLYSRELARIEHNLLKDSWPGF
Ga0209814_1002914143300027873Populus RhizosphereMELLIFGGALVILDVAAYFFGHNSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF
Ga0209814_1036952123300027873Populus RhizosphereMELVVFAGALVVLDVLAYLVGNDSRDASALDHHDRALDAIRRGDFDVYSDELAQIERKMLKDSWQGF
Ga0209814_1048958523300027873Populus RhizosphereMELLAFAGALVALDVAAYFFGYDSRDSRALDHHDRALDAIRRGRFDAYSHELAQFERSILKDVWPGF
Ga0209481_10002017103300027880Populus RhizosphereMELLIFGGALVILDVAAYFFGYNSREASALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF
Ga0209486_1021513923300027886Agricultural SoilMELLVFAGALVVLDVAAYFFGYDSREANALDHHDRALEAIKRGQFDVYSYELAQIERKLLKDSWPGF
Ga0209486_1049877123300027886Agricultural SoilMELVVFAGALVVLDVLAYFFGYNSRESSALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKDSWPGF
Ga0209486_1101864323300027886Agricultural SoilMVVYSTTQKGGAMMELLAFAGALVVLDVAAYFFGYESREGSALDHHDRALEAARRGQFDVYSHELAQIERKMLKDSWPGF
Ga0209382_1177657023300027909Populus RhizosphereMELLLFAGALVVLDVLAYFFGHDSREASVLDHHDRALDAIRRGQFDAYSHELAQIERKMLKGNWPGF
Ga0137415_1135528113300028536Vadose Zone SoilMELMVFAGALVALDVMAYVFGHDSREASALDPHDRALEAIRRGDFDLYNEELALIERKMVKGSWPGF
Ga0307307_1017898323300028718SoilMELLLFAGALVVLDVAAYFFGYDSREASAQDHHDRALDAVRRGQFDVYSHELAQIERAMLKDRWPGF
Ga0307282_1016566423300028784SoilMVVTSTGLKGGAEMELLVFAGALVVLDVAAYFFGYDSRETRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0307287_1002152423300028796SoilMELVVFAGALLVLDVLAYFFGYDSREASALDHHDRAIEAVRRGQFDVYSHELAQIERKLLKDSWPGF
Ga0307292_1005853223300028811SoilPVCRGMVVTSTGLKGGAEMELLVFAGALVVLDVAAYFFGYDSRETRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0307312_1018662133300028828SoilMELLLFAGALVVLDVAAYFFGYDSREASAQDHHDRALDAVRRGQLDVYSHELAQIERAMLKDRWPGF
Ga0307277_1001710343300028881SoilMELLLFAGALVVLDVAAYFFGYDSREASAQDHHDRALEAVRRGQFDVYSHELAQIERAMLKDRWPGF
Ga0307308_1013486223300028884SoilMELLLFAGALVVLDVAAYFFGYDSREASAQDHHDRALDAVRRGQFDVYSHELAQIERAMLKDSWPGF
Ga0308187_1042748713300031114SoilPSGHGKAGTMELLVFAGALVVLDVAAYFFGYDSRENRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0310813_1120934023300031716SoilGALVVLDVAAYFFGYDSREGRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0326597_1027803733300031965SoilLELLLFVGALVVLDVAAYFFGYDSRESSALDHHDRALEAVRRGQFDVYSHELAQIERKMLKGSWPGF
Ga0307471_10056658613300032180Hardwood Forest SoilFAGALVVLDVAAYFFGYDSRESRALDHHDRALEAIRRGQFDAYSHELAQFERSILKDVWPGF
Ga0214472_1178090823300033407SoilMELLVFAGALVVLDVAAYFFGYDGRESSALDHHDRALEAVRRGQFDVYSHELAQIERKMLKGSWPGF
Ga0364934_0425213_10_2133300034178SedimentMELVVFAGALVVLDVLAYFFGYNSREASALDHHDRALEAVRRGQFDGYSHELAQIERKMLKDSWRGF
Ga0364936_064237_236_4393300034773SedimentMELVLFAGALVVLDVLAYFFGYDSRDASALDHHDRALDAVRRGQFDVYSHELAQIERKMLKDSWPGF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.