Metagenome / Metatranscriptome Family F038238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038238
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	96 residues
Representative Sequence	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Number of Associated Samples	119
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	1.19 %
% of genes near scaffold ends (potentially truncated)	21.08 %
% of genes from short scaffolds (< 2000 bps)	65.66 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (81.325 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (21.687 % of family members)
Environment Ontology (ENVO)	Unclassified (55.422 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.024 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1TBL_comb48_EPIDRAFT_100012286 2JGI12421J11937_100124259 3JGI24028J26656_10067725 4JGI24028J26656_10071445 5JGI24218J26658_100531210 6JGI24219J26650_10101712 7B570J29586_10076994 8B570J29591_10046124 9B570J40625_10001289122 10JGI25922J50271_1000188415 11JGI25922J50271_1000202212 12Ga0031658_10056757 13Ga0065861_100221513 14Ga0049081_102831511 15Ga0049080_102593351 16Ga0049082_101922423 17Ga0079957_101562312 18Ga0070744_100255061 19Ga0070744_100350955 20Ga0070744_100585381 21Ga0070744_100615501 22Ga0070744_100723443 23Ga0070744_101306143 24Ga0070744_102447862 25Ga0070749_100722702 26Ga0070749_102365572 27Ga0070749_105150923 28Ga0075464_100531615 29Ga0070748_12087933 30Ga0099847_11478143 31Ga0102817_10779263 32Ga0102817_11139891 33Ga0102919_13000702 34Ga0102859_10572343 35Ga0104986_126011 36Ga0105745_12827402 37Ga0105746_11482502 38Ga0114364_100152333 39Ga0114876_11046983 40Ga0114880_10232922 41Ga0114880_10614483 42Ga0102829_10690393 43Ga0102829_12979981 44Ga0114973_101586552 45Ga0114962_101258795 46Ga0114977_101054674 47Ga0114977_101874534 48Ga0114977_106400372 49Ga0114981_106057272 50Ga0114975_100376208 51Ga0114975_100960472 52Ga0114975_106748042 53Ga0114969_1000493913 54Ga0114969_100314029 55Ga0114969_106312962 56Ga0114974_1001824111 57Ga0114976_101272825 58Ga0114971_1000038716 59Ga0114964_100256766 60Ga0133913_113467433 61Ga0137575_1000004834 62Ga0129318_100820683 63Ga0153799_10337163 64Ga0153801_10267713 65Ga0157210_10047405 66Ga0157498_10451861 67Ga0138284_11281894 68Ga0181365_11083233 69Ga0181343_11550753 70Ga0181357_12675692 71Ga0181355_11374773 72Ga0207193_18149522 73Ga0211734_103761282 74Ga0211734_105569892 75Ga0211733_104030404 76Ga0194037_10185891 77Ga0194037_11501281 78Ga0208858_10139344 79Ga0208232_10256652 80Ga0208224_10010414 81Ga0208852_10059787 82Ga0208852_10061233 83Ga0194055_101825984 84Ga0214206_100005032 85Ga0194047_100795712 86Ga0194048_1000018811 87Ga0194048_100428445 88Ga0194059_10216033 89Ga0194060_1000355318 90Ga0222714_100859104 91Ga0222714_100888913 92Ga0222714_103885481 93Ga0222713_102592212 94Ga0222713_104418342 95Ga0222712_104075443 96Ga0196901_12619321 97Ga0181351_10264664 98Ga0214919_100307569 99Ga0214919_106118923 100Ga0244775_1006464410 101Ga0244775_104280974 102Ga0244775_105129134 103Ga0208644_10413153 104Ga0208644_10426603 105Ga0208644_13041111 106Ga0208800_10331973 107Ga0208554_10079693 108Ga0208923_10371921 109Ga0208966_10128988 110Ga0208133_10176212 111Ga0208133_11459241 112Ga0209297_10045066 113Ga0209297_100745710 114Ga0209297_10947384 115Ga0209297_13733121 116Ga0209085_10644955 117Ga0209597_100149214 118Ga0209596_100028226 119Ga0209596_10590341 120Ga0209296_10064438 121Ga0209296_100795510 122Ga0209296_10321709 123Ga0209134_100589913 124Ga0209770_100477492 125Ga0209770_102169514 126Ga0209768_103161252 127Ga0209829_102137782 128Ga0209500_100148656 129Ga0209246_1000543512 130Ga0209107_100251841 131Ga0209353_100205798 132Ga0209777_104232312 133Ga0209777_105101611 134Ga0209668_1000462114 135Ga0209668_106964532 136Ga0209253_100857271 137Ga0209048_100809225 138Ga0209191_10227768 139Ga0304729_10008082 140Ga0304729_101144010 141Ga0304729_10621633 142Ga0304729_11031881 143Ga0315291_112679762 144Ga0315293_106102901 145Ga0315288_107081632 146Ga0315288_113742533 147Ga0315294_106131443 148Ga0315278_108139812 149Ga0315289_114031723 150Ga0315281_122811612 151Ga0315286_108605591 152Ga0334992_0254990_575_841 153Ga0334998_0027957_3554_3850 154Ga0335005_0214836_775_1071 155Ga0335024_0208797_235_528 156Ga0334987_0185101_1_282 157Ga0334995_0200165_469_762 158Ga0334990_0533958_183_479 159Ga0335037_0099414_915_1211 160Ga0335037_0725087_2_280 161Ga0335055_0085944_16_309 162Ga0335055_0354759_1_252 163Ga0335053_0010659_560_853 164Ga0335056_0380349_151_447 165Ga0335060_0026171_2_295 166Ga0335017_0664729_1_249
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1TBL_comb48_EPIDRAFT_100012286 2B570J29591_10046124 3Ga0209253_100857271 4Ga0304729_11031881
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1TBL_comb48_EPIDRAFT_100012286 2B570J29591_10046124 3Ga0209253_100857271 4Ga0304729_11031881
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.61% β-sheet: 0.00% Coil/Unstructured: 19.39%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF08299	Bac_DnaA_C	33.73
PF03837	RecT	8.43
PF04404	ERF	3.61
PF14090	HTH_39	3.01
PF13482	RNase_H_2	2.41
PF13392	HNH_3	1.20
PF05065	Phage_capsid	1.20
PF04883	HK97-gp10_like	0.60
PF10544	T5orf172	0.60
PF00145	DNA_methylase	0.60

Showing 1 to 10 of 16 entries

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COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	33.73
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	8.43
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	1.20
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.60
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	0.60
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	0.60

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.95 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	4.82 %
Unclassified	root	N/A	12.05 %
Viruses	superkingdom	All Organisms → Viruses	83.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	81.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.81 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	81.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %
Unclassified	root	N/A	12.05 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	81.33 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.81 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	81.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	1.20 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	80.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	1.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %
Unclassified	root	N/A	12.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	80.72 %

Name	Rank	Taxonomy	Distribution
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %
Unclassified	root	N/A	12.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	80.72 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000439\|TBL_comb48_EPIDRAFT_1000122	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	57461	Open in IMG/M
3300000756\|JGI12421J11937_10012425	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3249	Open in IMG/M
3300002091\|JGI24028J26656_1006772	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300002091\|JGI24028J26656_1007144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1544	Open in IMG/M
3300002092\|JGI24218J26658_1005312	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2614	Open in IMG/M
3300002098\|JGI24219J26650_1010171	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1579	Open in IMG/M
3300002276\|B570J29586_1007699	Not Available	1020	Open in IMG/M
3300002404\|B570J29591_1004612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1129	Open in IMG/M
3300002835\|B570J40625_100012891	Not Available	14930	Open in IMG/M
3300003413\|JGI25922J50271_10001884	Not Available	6079	Open in IMG/M

Showing 1 to 10 of 166 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	75.30%
Marine	Environmental → Aquatic → Marine	24.70%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	8.43%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.42%
Lake	Environmental → Aquatic → Freshwater → Lake	50.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.10%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.60%
Pond	Environmental → Aquatic → Freshwater → Pond	0.60%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.84%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.02%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.42%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.20%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.02%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.22%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.98%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.43%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.60%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.82%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.02%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	7.23%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.42%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.61%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.20%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.24%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.02%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.61%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.60%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.20%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	21.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.81%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.22%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.60%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.41%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.60%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.60%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.60%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.41%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.60%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.42%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002276	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002404	Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TBL_comb48_EPIDRAFT_100012286	3300000439	Freshwater	MKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEGLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ*
JGI12421J11937_100124259	3300000756	Freshwater And Sediment	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
JGI24028J26656_10067725	3300002091	Lentic	MKLDYQGKQLKLHKRATCLLELLKKAQGEQARQEKLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ*
JGI24028J26656_10071445	3300002091	Lentic	KQLKLHKRATCLLELLKKAQGEQARQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINVIQ*
JGI24218J26658_100531210	3300002092	Lentic	MKLDYQGKQLKLHKRATCLLELLKKAQGEQARQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINVIQ*
JGI24219J26650_10101712	3300002098	Lentic	MKLDYQGKQLKLHKRATCLLELLKKAQGEQARQEKLLAEWXXAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINVIQ*
B570J29586_10076994	3300002276	Freshwater	MKLDYQGRQLKLHQRATTLLELLKKAQGEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
B570J29591_10046124	3300002404	Freshwater	CLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
B570J40625_10001289122	3300002835	Freshwater	MLENQGKQLKLHQRASCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
JGI25922J50271_1000188415	3300003413	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
JGI25922J50271_1000202212	3300003413	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0031658_10056757	3300003860	Freshwater Lake Sediment	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0065861_100221513	3300004448	Marine	MKLDYQGKQLKLHKRATCLLELLKKAQSEQARQEGLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDVQKRILQSYYWLIVELYSISENFMLPVNIIQ*
Ga0049081_102831511	3300005581	Freshwater Lentic	TCLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0049080_102593351	3300005582	Freshwater Lentic	MLENQGKQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0049082_101922423	3300005584	Freshwater Lentic	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLIEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0079957_101562312	3300005805	Lake	MTLNYQGKQLVLHKRATTLLELLKKAQSEQSRQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0070744_100255061	3300006484	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0070744_100350955	3300006484	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0070744_100585381	3300006484	Estuarine	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0070744_100615501	3300006484	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFMLPVNRVQ*
Ga0070744_100723443	3300006484	Estuarine	LLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0070744_101306143	3300006484	Estuarine	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ*
Ga0070744_102447862	3300006484	Estuarine	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLVEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0070749_100722702	3300006802	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITEDFILPVNRVQ*
Ga0070749_102365572	3300006802	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0070749_105150923	3300006802	Aqueous	MKLDYQGKQLILHKRATTLLELLKKAQSEQSRQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYGITEDFILPVNRVQ*
Ga0075464_100531615	3300006805	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ*
Ga0070748_12087933	3300006920	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYD
Ga0099847_11478143	3300007540	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYGITEDFILPVNRVQ*
Ga0102817_10779263	3300007555	Estuarine	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDI
Ga0102817_11139891	3300007555	Estuarine	KLHQRATCLLELLKKAQSEQARQEGLLSEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ*
Ga0102919_13000702	3300007597	Estuarine	TLNYQGKQLVLHKRATTLLELLKKAQGEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0102859_10572343	3300007708	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0104986_126011	3300007734	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0105745_12827402	3300007972	Estuary Water	MLENQGKQLKLHQRATCLLELLKKAQGEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILQSYYWLVVELYDITENFILPVNRIQ*
Ga0105746_11482502	3300007973	Estuary Water	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILQSYYWLVVELYDITENFILPVNRIQ*
Ga0114364_100152333	3300008267	Freshwater, Plankton	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0114876_11046983	3300008448	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILQSYYWLVVELYDITENFILPVNRIQ*
Ga0114880_10232922	3300008450	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0114880_10614483	3300008450	Freshwater Lake	MLDNQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0102829_10690393	3300009026	Estuarine	MTLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0102829_12979981	3300009026	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLSEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0114973_101586552	3300009068	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEKLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKCYYWLIVELYSISENFLLPINVIE*
Ga0114962_101258795	3300009151	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEKLLSEWRAAGNYDNIRLFTHENNYLIRIAELNDVQKRVLQSYYWLVIELYSISENFMLPINIIQ*
Ga0114977_101054674	3300009158	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEALLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0114977_101874534	3300009158	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQWRQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWIIVELYSISENFMLPINLVQ*
Ga0114977_106400372	3300009158	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITE
Ga0114981_106057272	3300009160	Freshwater Lake	ATTLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0114975_100376208	3300009164	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0114975_100960472	3300009164	Freshwater Lake	MKLDYQGRQLKLHQRATCLLEILKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ*
Ga0114975_106748042	3300009164	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQWRQEKLLSEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINVIQ*
Ga0114969_1000493913	3300009181	Freshwater Lake	MKLDYQGKQLKLHKKATCLLELLKKAQSEQWRQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINITQ*
Ga0114969_100314029	3300009181	Freshwater Lake	MKLDYQGKQLKLHRRATCLLELLKKAQAEQSRQEGLLSEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIE*
Ga0114969_106312962	3300009181	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0114974_1001824111	3300009183	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPINRVQ*
Ga0114976_101272825	3300009184	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPV
Ga0114971_1000038716	3300009185	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEKLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIE*
Ga0114964_100256766	3300010157	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEKLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ*
Ga0133913_113467433	3300010885	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQARQEGLLSEWRAAGNYDNIRLFNHENNYLIRIAELNDVQKRILQSYYWLIVELYSISENFMLPVNVIQ*
Ga0137575_1000004834	3300010970	Pond Fresh Water	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYNLTEDFILPVNRIV*
Ga0129318_100820683	3300011009	Freshwater To Marine Saline Gradient	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIV*
Ga0153799_10337163	3300012012	Freshwater	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFNHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ*
Ga0153801_10267713	3300012017	Freshwater	MTLNYQGKQLVLHKRATTLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITDNFILPVNRVQ*
Ga0157210_10047405	3300012665	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITDNFILPVNRVQ*
Ga0157498_10451861	3300012666	Freshwater, Surface Ice	MTLNYQGKQLVLHKRATTLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITDNFILPVN
Ga0138284_11281894	3300012779	Freshwater Lake	MKLDYQGRQLKLHQRATCLLEILKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ*
Ga0181365_11083233	3300017736	Freshwater Lake	LLELLKKAQSEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0181343_11550753	3300017766	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0181357_12675692	3300017777	Freshwater Lake	MLENQSKQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNQIQ
Ga0181355_11374773	3300017785	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLSEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0207193_18149522	3300020048	Freshwater Lake Sediment	MKLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0211734_103761282	3300020159	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0211734_105569892	3300020159	Freshwater	MLQNQSKQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0211733_104030404	3300020160	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0194037_10185891	3300020164	Anoxic Zone Freshwater	MKLDYQGKQLKLHRRATCLLELLKKAQAEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVI
Ga0194037_11501281	3300020164	Anoxic Zone Freshwater	LDYQGKQLKLHRRATCLLELLKKAQAEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIQ
Ga0208858_10139344	3300020524	Freshwater	TCLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0208232_10256652	3300020527	Freshwater	MLENQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0208224_10010414	3300020528	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGCYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0208852_10059787	3300020560	Freshwater	MLENQGKQLKLHQRASCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0208852_10061233	3300020560	Freshwater	MKLDYQGRQLKLHQRATTLLELLKKAQGEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0194055_101825984	3300021079	Anoxic Zone Freshwater	CLLELLKKAQSEQARQEQLLAEWRAAGNYDNIRLFTHENNYLIRIAELNDVQKRVLQSYYWLVIELYSISENFMLPINIIQ
Ga0214206_100005032	3300021131	Freshwater	MNLKTNSMKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEGLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ
Ga0194047_100795712	3300021354	Anoxic Zone Freshwater	MKLDYQGKQLKLHRRATCLLELLKKAQAEQSRQEKLLAEWRAAGHFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINIIE
Ga0194048_1000018811	3300021519	Anoxic Zone Freshwater	MKLDYQGKQLKLHKRATCLLELLKKAQSEQWRQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINLVQ
Ga0194048_100428445	3300021519	Anoxic Zone Freshwater	MKLDYQGKQLKLHRRATCLLELLKKAQAEQSRQEKLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIE
Ga0194059_10216033	3300021600	Anoxic Zone Freshwater	MTLNYQGKQLKLHQRATCLLELLKKAQAQQSRQEQLLKEWRAAGNFDNIRLFTHENNYLIRIAELNDVQKRILQSYYWLIVDLYEITDNFFLPVNRVL
Ga0194060_1000355318	3300021602	Anoxic Zone Freshwater	MTLNYQGKQLVLHKRATTLLELLKKAQAQQSRQEQLLKEWRAAGNFDNIRLFTHENNYLIRIAELNDVQKRILQSYYWLIVDLYEITDNFFLPVNRVL
Ga0222714_100859104	3300021961	Estuarine Water	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILQSYYWLIVELYDITENFILPVNRIQ
Ga0222714_100888913	3300021961	Estuarine Water	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0222714_103885481	3300021961	Estuarine Water	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILQSYYWLVVELYDITENFILPVNRIQ
Ga0222713_102592212	3300021962	Estuarine Water	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILQSYYWLIVELYDITENFILPVNRIQ
Ga0222713_104418342	3300021962	Estuarine Water	MLDNQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0222712_104075443	3300021963	Estuarine Water	MKLDYQGRQLKLHQRATCLLEILKKAQSEQARQEGLLAEWRAAGSFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0196901_12619321	3300022200	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFM
Ga0181351_10264664	3300022407	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILQSYYWLVVELYDITENFILPVNRIQ
Ga0214919_100307569	3300023184	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0214919_106118923	3300023184	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0244775_1006464410	3300024346	Estuarine	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0244775_104280974	3300024346	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0244775_105129134	3300024346	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0208644_10413153	3300025889	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0208644_10426603	3300025889	Aqueous	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITEDFILPVNRVQ
Ga0208644_13041111	3300025889	Aqueous	MKLDYQGKQLILHKRATTLLELLKKAQSEQSRQEGLLAEWRAAGNYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYGITEDFILPVNRVQ
Ga0208800_10331973	3300027193	Estuarine	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0208554_10079693	3300027212	Estuarine	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0208923_10371921	3300027320	Estuarine	ENQGRQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0208966_10128988	3300027586	Freshwater Lentic	MLENQGKQLKLHQRATCLLELLKKAQGEQSRQEGLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFML
Ga0208133_10176212	3300027631	Estuarine	MLENQGRQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0208133_11459241	3300027631	Estuarine	RQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGAYDNARLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0209297_10045066	3300027733	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209297_100745710	3300027733	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQWRQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWIIVELYSISENFMLPINLVQ
Ga0209297_10947384	3300027733	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEALLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0209297_13733121	3300027733	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIL
Ga0209085_10644955	3300027741	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEKLLSEWRAAGNYDNIRLFTHENNYLIRIAELNDVQKRVLQSYYWLVIELYSISENFMLPINIIQ
Ga0209597_100149214	3300027746	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEKLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIE
Ga0209596_100028226	3300027754	Freshwater Lake	MKLDYQGKQLKLHKKATCLLELLKKAQSEQWRQEKLLAEWRSAGNFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPINITQ
Ga0209596_10590341	3300027754	Freshwater Lake	MKLDYQGKQLKLHRRATCLLELLKKAQAEQSRQEGLLSEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIE
Ga0209296_10064438	3300027759	Freshwater Lake	MKLDYQGRQLKLHQRATCLLEILKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209296_100795510	3300027759	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPINRVQ
Ga0209296_10321709	3300027759	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209134_100589913	3300027764	Freshwater Lake	MTLNYQGKQLKLHQRATCLLELLKKAQSQQSRQEELLAEWRAAGNFDNVRLFTHENNYLIRIAELNDIKKRILQSYYWLIVELYEITDNFFLPVNRVI
Ga0209770_100477492	3300027769	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0209770_102169514	3300027769	Freshwater Lake	YQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209768_103161252	3300027772	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQSRQESLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0209829_102137782	3300027777	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQARQEGLLSEWRAAGNYDNIRLFNHENNYLIRIAELNDVQKRILQSYYWLIVELYSISENFMLPVNVIQ
Ga0209500_100148656	3300027782	Freshwater Lake	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0209246_1000543512	3300027785	Freshwater Lake	KQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209107_100251841	3300027797	Freshwater And Sediment	MLENQGKQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0209353_100205798	3300027798	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQSRQESLLSEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209777_104232312	3300027896	Freshwater Lake Sediment	MNIIYQGKQLILHKRATTLLELLKKAQSEQSRQEGLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDVQKRILKSYYWLIVELYSISENFMLPVNVIQ
Ga0209777_105101611	3300027896	Freshwater Lake Sediment	MKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ
Ga0209668_1000462114	3300027899	Freshwater Lake Sediment	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0209668_106964532	3300027899	Freshwater Lake Sediment	MKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLIVELYSISENFLLPINVIE
Ga0209253_100857271	3300027900	Freshwater Lake Sediment	MKLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDI
Ga0209048_100809225	3300027902	Freshwater Lake Sediment	MKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEGLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDVQKRILKSYYWLIVELYSISENFMLPVNVIQ
Ga0209191_10227768	3300027969	Freshwater Lake	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLSEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0304729_10008082	3300028392	Freshwater Lake	LELLKKAQAEQSRQEKLLSEWRAAGNYDNIRLFTHENNYLIRIAELNDVQKRVLQSYYWLVIELYSISENFMLPINIIQ
Ga0304729_101144010	3300028392	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEKLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ
Ga0304729_10621633	3300028392	Freshwater Lake	MKLDYQGKQLKLHKRATCLLELLKKAQSEQSRQEGLLAEWRAAGHFDNVRLFTHENNYLIRIAELNDIQKRILKSYYWLIVELYSISENFMLPVNVIQ
Ga0304729_11031881	3300028392	Freshwater Lake	MKPKINSMKLDYQGKQLKLHKRATCLLELLKKAQAEQSRQEKLLAEWRAAGNYDNIRLFTHENNYLIRIAELNDVQKRVLQSYYWL
Ga0315291_112679762	3300031707	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLVEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0315293_106102901	3300031746	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITDNFMLPVNRVQ
Ga0315288_107081632	3300031772	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLVEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0315288_113742533	3300031772	Sediment	LLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0315294_106131443	3300031952	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRLQ
Ga0315278_108139812	3300031997	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLVEWRAAGAYENVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0315289_114031723	3300032046	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLVEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0315281_122811612	3300032163	Sediment	RATCLLELLKKAQGEQARQEGLLVEWRAAGAYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0315286_108605591	3300032342	Sediment	MLENQGKQLKLHQRATCLLELLKKAQGEQARQEGLLVEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRIQ
Ga0334992_0254990_575_841	3300033992	Freshwater	MLENQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENF
Ga0334998_0027957_3554_3850	3300034019	Freshwater	MTLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0335005_0214836_775_1071	3300034022	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0335024_0208797_235_528	3300034051	Freshwater	MLENQSKQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0334987_0185101_1_282	3300034061	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPV
Ga0334995_0200165_469_762	3300034062	Freshwater	MLENQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0334990_0533958_183_479	3300034068	Freshwater	MTLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0335037_0099414_915_1211	3300034107	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQARQEGLLAEWRAAGNFDNVRLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0335037_0725087_2_280	3300034107	Freshwater	MTLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDVQKRILKSYYWLVVELYDITENFILP
Ga0335055_0085944_16_309	3300034110	Freshwater	MLENQGKQLKLHQRASCLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0335055_0354759_1_252	3300034110	Freshwater	ATTLLELLKKAQGEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0335053_0010659_560_853	3300034118	Freshwater	MLENQGKQLKLHQRASCLLELLKKAQSEQARQEGLLAEWRAAGNYDNIRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRVQ
Ga0335056_0380349_151_447	3300034120	Freshwater	MKLDYQGRQLKLHQRATCLLELLKKAQSEQSRQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFMLPVNRVQ
Ga0335060_0026171_2_295	3300034122	Freshwater	KLDYQGRQLKLHQRATCLLELLKKAQGEQARQEGLLAEWRAAGSYDNVRLFTHENNYLIRLAELNDIQKRILKSYYWLVVELYDITENFILPVNRIQ
Ga0335017_0664729_1_249	3300034167	Freshwater	MTLDYQGRQLKLHQRATCLLELLKKAQAEQYRQERLLAEWRSAGAYDNARLFTHENNYLIRLAELNDVQKRILKSYYWLVVEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038238

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences