Metagenome / Metatranscriptome Family F037836

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037836
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	39 residues
Representative Sequence	MASKTEETPQKEEMPEKEGPETLPDSPLLDLSDAAVKK
Number of Associated Samples	139
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.06 %
% of genes near scaffold ends (potentially truncated)	94.01 %
% of genes from short scaffolds (< 2000 bps)	93.41 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.072 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.551 % of family members)
Environment Ontology (ENVO)	Unclassified (37.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.299 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.55% β-sheet: 0.00% Coil/Unstructured: 95.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF01165	Ribosomal_S21	11.98
PF05362	Lon_C	1.80
PF00313	CSD	1.80
PF00343	Phosphorylase	1.20
PF00140	Sigma70_r1_2	1.20
PF00571	CBS	1.20
PF05598	DUF772	1.20
PF07750	GcrA	1.20
PF13185	GAF_2	0.60
PF03006	HlyIII	0.60
PF07508	Recombinase	0.60
PF03979	Sigma70_r1_1	0.60
PF13683	rve_3	0.60
PF13763	DUF4167	0.60
PF02190	LON_substr_bdg	0.60
PF13581	HATPase_c_2	0.60
PF00271	Helicase_C	0.60
PF13333	rve_2	0.60
PF04986	Y2_Tnp	0.60
PF00982	Glyco_transf_20	0.60
PF00027	cNMP_binding	0.60
PF01734	Patatin	0.60
PF07369	DUF1488	0.60
PF12769	PNTB_4TM	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	11.98
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	1.80
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.80
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	1.80
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	1.80
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	1.80
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	1.20
COG5352	Uncharacterized conserved protein	Function unknown [S]	1.20
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.60
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.60
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.60
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.60
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.60
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.07 %
Unclassified	root	N/A	35.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.07 %
Unclassified	root	N/A	35.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.07 %
Unclassified	root	N/A	35.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.90 %
Unclassified	root	N/A	35.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.20 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.71 %
Unclassified	root	N/A	35.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	18.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.38 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.20 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.60 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.60 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.60 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.56 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	2.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.20 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.60 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.60 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.60 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.60 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.56 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.20 %
Microvirga arsenatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arsenatis	0.60 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.60 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.60 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1059847	Not Available	582	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1005454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2425	Open in IMG/M
3300001213\|JGIcombinedJ13530_109204374	Not Available	647	Open in IMG/M
3300004479\|Ga0062595_102187611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	541	Open in IMG/M
3300004479\|Ga0062595_102289083	Not Available	532	Open in IMG/M
3300005332\|Ga0066388_106263868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005332\|Ga0066388_106879332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300005332\|Ga0066388_108521577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300005556\|Ga0066707_10913713	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005557\|Ga0066704_10072482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2219	Open in IMG/M
3300005713\|Ga0066905_100288888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1281	Open in IMG/M
3300005713\|Ga0066905_101373527	Not Available	638	Open in IMG/M
3300005713\|Ga0066905_102126428	Not Available	522	Open in IMG/M
3300005764\|Ga0066903_100637231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1859	Open in IMG/M
3300005764\|Ga0066903_102275882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300006032\|Ga0066696_10327191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300006046\|Ga0066652_101131051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300006059\|Ga0075017_100300461	Not Available	1185	Open in IMG/M
3300006102\|Ga0075015_100102507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1439	Open in IMG/M
3300006176\|Ga0070765_100216695	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300006176\|Ga0070765_102131336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	523	Open in IMG/M
3300006796\|Ga0066665_10822404	Not Available	730	Open in IMG/M
3300006796\|Ga0066665_11637379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300006800\|Ga0066660_11148184	Not Available	612	Open in IMG/M
3300006847\|Ga0075431_100734125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300007076\|Ga0075435_100710679	Not Available	874	Open in IMG/M
3300009156\|Ga0111538_12053118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300009177\|Ga0105248_12120360	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300009522\|Ga0116218_1260278	Not Available	779	Open in IMG/M
3300009522\|Ga0116218_1325752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300009525\|Ga0116220_10281282	Not Available	730	Open in IMG/M
3300009698\|Ga0116216_10207161	Not Available	1202	Open in IMG/M
3300009808\|Ga0105071_1085511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300010358\|Ga0126370_12141990	Not Available	550	Open in IMG/M
3300010361\|Ga0126378_12433122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300010361\|Ga0126378_12812334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300010366\|Ga0126379_10820338	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300010376\|Ga0126381_104558662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300010398\|Ga0126383_12605606	Not Available	589	Open in IMG/M
3300010398\|Ga0126383_13479009	Not Available	514	Open in IMG/M
3300010880\|Ga0126350_10063161	Not Available	507	Open in IMG/M
3300011271\|Ga0137393_10558623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300011271\|Ga0137393_11062106	Not Available	688	Open in IMG/M
3300011420\|Ga0137314_1163959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300012010\|Ga0120118_1050323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arsenatis	1052	Open in IMG/M
3300012096\|Ga0137389_10430138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300012137\|Ga0137346_1041301	Not Available	619	Open in IMG/M
3300012189\|Ga0137388_10613895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300012201\|Ga0137365_10804891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300012209\|Ga0137379_11318494	Not Available	627	Open in IMG/M
3300012285\|Ga0137370_10386511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300012358\|Ga0137368_10181227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1519	Open in IMG/M
3300012361\|Ga0137360_10817063	Not Available	802	Open in IMG/M
3300012469\|Ga0150984_101152149	Not Available	584	Open in IMG/M
3300012685\|Ga0137397_11338502	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012922\|Ga0137394_10707012	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300012923\|Ga0137359_11628246	Not Available	533	Open in IMG/M
3300012925\|Ga0137419_11519749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300012944\|Ga0137410_10202834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1536	Open in IMG/M
3300012986\|Ga0164304_10969115	Not Available	671	Open in IMG/M
3300012989\|Ga0164305_10890056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300014325\|Ga0163163_11210912	Not Available	818	Open in IMG/M
3300015371\|Ga0132258_11568043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1663	Open in IMG/M
3300015372\|Ga0132256_103210187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	550	Open in IMG/M
3300015373\|Ga0132257_103148212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300016294\|Ga0182041_10847135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300016319\|Ga0182033_12108550	Not Available	514	Open in IMG/M
3300016341\|Ga0182035_11199741	Not Available	678	Open in IMG/M
3300016341\|Ga0182035_12132523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300016371\|Ga0182034_11399724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	611	Open in IMG/M
3300016387\|Ga0182040_11824562	Not Available	521	Open in IMG/M
3300016404\|Ga0182037_11396560	Not Available	619	Open in IMG/M
3300016422\|Ga0182039_10868066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300016422\|Ga0182039_11622956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300016422\|Ga0182039_11675674	Not Available	581	Open in IMG/M
3300016422\|Ga0182039_12112593	Not Available	519	Open in IMG/M
3300016445\|Ga0182038_10222590	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300016445\|Ga0182038_12127582	Not Available	509	Open in IMG/M
3300017822\|Ga0187802_10367559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300018056\|Ga0184623_10440403	Not Available	566	Open in IMG/M
3300018422\|Ga0190265_13806951	Not Available	503	Open in IMG/M
3300018433\|Ga0066667_10996482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300018468\|Ga0066662_10759179	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300020015\|Ga0193734_1080994	Not Available	558	Open in IMG/M
3300021344\|Ga0193719_10036904	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300021401\|Ga0210393_10249572	Not Available	1439	Open in IMG/M
3300021402\|Ga0210385_10104240	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300021411\|Ga0193709_1101764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300021433\|Ga0210391_10207017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1543	Open in IMG/M
3300025846\|Ga0209538_1209265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	723	Open in IMG/M
3300025862\|Ga0209483_1077450	Not Available	1497	Open in IMG/M
3300025888\|Ga0209540_10148068	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300025915\|Ga0207693_10266567	Not Available	1342	Open in IMG/M
3300025928\|Ga0207700_11646715	Not Available	567	Open in IMG/M
3300026277\|Ga0209350_1086595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300026309\|Ga0209055_1123292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
3300026532\|Ga0209160_1077162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1773	Open in IMG/M
3300026879\|Ga0207763_1005000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300027313\|Ga0207780_1082690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300027645\|Ga0209117_1135317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300027875\|Ga0209283_10803243	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300027882\|Ga0209590_10933030	Not Available	545	Open in IMG/M
3300027907\|Ga0207428_10620713	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300028711\|Ga0307293_10192140	Not Available	650	Open in IMG/M
3300028717\|Ga0307298_10191177	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300028784\|Ga0307282_10341926	Not Available	723	Open in IMG/M
3300028799\|Ga0307284_10447329	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300028881\|Ga0307277_10029253	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300028884\|Ga0307308_10192634	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300029636\|Ga0222749_10687471	Not Available	560	Open in IMG/M
3300030730\|Ga0307482_1162001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300030905\|Ga0308200_1064243	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300030989\|Ga0308196_1030680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300031090\|Ga0265760_10283581	Not Available	583	Open in IMG/M
3300031561\|Ga0318528_10402670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	735	Open in IMG/M
3300031573\|Ga0310915_10870239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300031573\|Ga0310915_11249904	Not Available	512	Open in IMG/M
3300031640\|Ga0318555_10296873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300031668\|Ga0318542_10338232	Not Available	773	Open in IMG/M
3300031719\|Ga0306917_10302619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1235	Open in IMG/M
3300031719\|Ga0306917_10852728	Not Available	713	Open in IMG/M
3300031723\|Ga0318493_10385560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300031740\|Ga0307468_101779408	Not Available	583	Open in IMG/M
3300031744\|Ga0306918_10124253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1874	Open in IMG/M
3300031748\|Ga0318492_10020849	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300031770\|Ga0318521_10376794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300031771\|Ga0318546_11023646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	581	Open in IMG/M
3300031778\|Ga0318498_10507992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300031792\|Ga0318529_10099112	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300031795\|Ga0318557_10123253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	1160	Open in IMG/M
3300031805\|Ga0318497_10880339	Not Available	503	Open in IMG/M
3300031832\|Ga0318499_10176570	Not Available	833	Open in IMG/M
3300031845\|Ga0318511_10323634	Not Available	699	Open in IMG/M
3300031879\|Ga0306919_10493707	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031879\|Ga0306919_11178300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300031880\|Ga0318544_10375591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031894\|Ga0318522_10382620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300031910\|Ga0306923_11201900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300031910\|Ga0306923_12228912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300031941\|Ga0310912_10204670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1509	Open in IMG/M
3300031941\|Ga0310912_11527205	Not Available	502	Open in IMG/M
3300031942\|Ga0310916_10624666	Not Available	915	Open in IMG/M
3300031942\|Ga0310916_10835073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300031945\|Ga0310913_10455543	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300031946\|Ga0310910_11173008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300031947\|Ga0310909_11223217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031954\|Ga0306926_11718704	Not Available	715	Open in IMG/M
3300031954\|Ga0306926_12273770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300031959\|Ga0318530_10183287	Not Available	856	Open in IMG/M
3300031959\|Ga0318530_10481241	Not Available	515	Open in IMG/M
3300031981\|Ga0318531_10087969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300032001\|Ga0306922_10537433	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300032001\|Ga0306922_10700001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300032035\|Ga0310911_10376656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300032042\|Ga0318545_10093646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300032060\|Ga0318505_10230356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300032066\|Ga0318514_10405542	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300032160\|Ga0311301_10213421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3274	Open in IMG/M
3300032261\|Ga0306920_100692318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1502	Open in IMG/M
3300032261\|Ga0306920_103461435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300033290\|Ga0318519_10069067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1827	Open in IMG/M
3300034148\|Ga0364927_0132264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.01%
Host-Associated	Host-Associated	5.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.82%
Plants	Host-Associated → Plants	5.99%
Aquatic	Environmental → Aquatic	4.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.19%
Sediment	Environmental → Aquatic → Sediment	2.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.20%
Freshwater	Environmental → Aquatic → Freshwater	0.60%
Marine	Environmental → Aquatic → Marine	0.60%
Floodplain	Environmental → Terrestrial → Floodplain	0.60%
Roots	Host-Associated → Plants → Roots	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.64%
Loam	Environmental → Terrestrial → Soil → Loam	8.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.60%
Sand	Environmental → Terrestrial → Soil → Sand	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.19%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.60%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.60%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.60%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.60%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.60%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012137	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10598472	3300000580	Forest Soil	MASKTQETSQKEEMLEKEGPETLPDSPLLDVSDPA
AF_2010_repII_A100DRAFT_10054541	3300000655	Forest Soil	MASKTQETPQKEPEKEGPETLPDSPRLDLSDAAIKELIRSAK
JGIcombinedJ13530_1092043741	3300001213	Wetland	MATKTDKTPQEDELPEKRGPESPPDSPLLDLSDAAVK
Ga0062595_1021876111	3300004479	Soil	MTSNTEVMPQKEEVPETEGLETPPDRPVLDLSGAAIKALIRSASTR
Ga0062595_1022890832	3300004479	Soil	VERLMASKTNATPQQEEVPNKEGSETPPDSPLLDLSGAAV
Ga0066388_1062638682	3300005332	Tropical Forest Soil	VWRLMASTTEETPQKEEMPEKEGPETLPDSPLLDLSDAAV
Ga0066388_1068793322	3300005332	Tropical Forest Soil	MASHTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAAIKKLIRSA
Ga0066388_1085215771	3300005332	Tropical Forest Soil	MASNTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAAIKKLIRS
Ga0066707_109137132	3300005556	Soil	MARKTRVTPQKVQLPEKEGPETPSESPLLDLSDAAVKK
Ga0066704_100724824	3300005557	Soil	MASKTKETPQKQEMPEKEGPETLPDSPLLDLSDAAVKK
Ga0066905_1002888881	3300005713	Tropical Forest Soil	MASKTEETPQKEEMLEKDGPETLPDSPLLDLSDPAVK
Ga0066905_1013735273	3300005713	Tropical Forest Soil	MASKTEETPQKEEMPEKAGPETPPDDLSDAAIAKL
Ga0066905_1021264281	3300005713	Tropical Forest Soil	MASKTEETPQKEEMLETEGPLLSLSDGAVRELARFGKKHGYVTSDQINSVLP
Ga0066903_1006372311	3300005764	Tropical Forest Soil	MASKTEKTPQKEEMPEKAGPETLPHDLSDAAITKLIRS
Ga0066903_1022758821	3300005764	Tropical Forest Soil	MASKTEETPQKEEMLEMEGPETLPDSPLLGLSDGAVRE
Ga0066696_103271913	3300006032	Soil	MASNTKMTPLKEEVLEKEGSEIRPDSPLLDLSDAAIKKL
Ga0066652_1011310511	3300006046	Soil	MASNTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAA
Ga0075017_1003004612	3300006059	Watersheds	MASKIKVMPQKEEMLEKEDPETQSDRPLLDLSAAAVKELI
Ga0075015_1001025071	3300006102	Watersheds	MASKTKVTPQKEEMPEKEGPETSPDGPLLDLLENRTVRLRRGGAH
Ga0070765_1002166953	3300006176	Soil	MAGKIVVTPLKEEMLEKEGPEAPPDSPLLDLSDMAV
Ga0070765_1021313361	3300006176	Soil	MASKIKVMPQKEEMLEKDGPETQSDRPLLDLSAVAVKELIRNA
Ga0066665_108224041	3300006796	Soil	MASKTEKTPQKEEMLEKDGPETLPDSPLLELSDPAVKELIRSLQAR*
Ga0066665_116373792	3300006796	Soil	MAGKTKATPRKDEVPDKEGPDTSPDSPLLDLSDAAVK
Ga0066660_111481841	3300006800	Soil	MTSKTEETPQKEEMLEKDGPETLPDSPLLDLSDPAVKE
Ga0075431_1007341253	3300006847	Populus Rhizosphere	MAIKAKGTPQTEPVPATEGPETPPDRPLLDLLDAAVKKLIRTAK
Ga0075435_1007106794	3300007076	Populus Rhizosphere	MANSTEATPQQNETEKEASETPDSPLPLLDLSDAAVKKLI
Ga0111538_120531183	3300009156	Populus Rhizosphere	MAIKAKGTPQTEPVPATEGPETPPDRPLLDLLDAA
Ga0105248_121203602	3300009177	Switchgrass Rhizosphere	MASNNMTPLKKEVLEKEGHEIRPDSSLLDLSDAAIEKLIRSAKKS
Ga0116218_12602781	3300009522	Peatlands Soil	MASKTKVKPQKEGIPEKEGSGTPLDRPLFDLSDAA
Ga0116218_13257522	3300009522	Peatlands Soil	MTSKINVTSQKEEMREKEGPETQSDRPLLDLSAVA
Ga0116220_102812821	3300009525	Peatlands Soil	MASKTEVKGQKHATPEREGHETPPDGPLLDLSDAAIKK
Ga0116216_102071611	3300009698	Peatlands Soil	MASKIKVMPQKEEMLEQEDPETQSDRPVLDLSAAVK
Ga0105071_10855111	3300009808	Groundwater Sand	MASKTEVTPRKEEVPEKEGPETPPDSPLVDLSNAA
Ga0126370_121419901	3300010358	Tropical Forest Soil	MASNIKATPQKEEVPEKEGPETLPDSPLLDLFDAAV
Ga0126378_124331221	3300010361	Tropical Forest Soil	MASKTEETPQKEEMLEIEGPETLPESPLLGISDGAVREL
Ga0126378_128123342	3300010361	Tropical Forest Soil	MASNIRATSQKEDAPEKEGPETLPDSPLLLDPSDAAVKKLI
Ga0126379_108203382	3300010366	Tropical Forest Soil	MASNTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAAI
Ga0126381_1045586621	3300010376	Tropical Forest Soil	MASKIQETPQKGEIPEKEGPETLPDSPLLGLSDGAVRE
Ga0126383_126056062	3300010398	Tropical Forest Soil	MASKSKPTLQKDEVPEKEDPEAPPDSPLLDLPGAAIRTLN*
Ga0126383_134790091	3300010398	Tropical Forest Soil	MASKTEETPQKEEMLEMEGPETLPESPLLGLSDGAVR
Ga0126350_100631611	3300010880	Boreal Forest Soil	MTSKTKVTPQKEEMLEKECLEGPPDSPPIDRLNDSVKALVRTAV
Ga0137393_105586233	3300011271	Vadose Zone Soil	MASKTKVTRQKEEVPEKGGPETPPDSPLLDLSNAAVEVLI
Ga0137393_110621061	3300011271	Vadose Zone Soil	MASSPKVTPQKDKVPEKGGSETPPDSPLLGLSDAAV
Ga0137314_11639591	3300011420	Soil	MASKTKVTPQKEEMLEKEGPETLPGSPLLDLSNAAVKALI
Ga0120118_10503231	3300012010	Permafrost	MASKTNATPQKEEVPKKEGPETPPDSPLLDLSDAAVKK
Ga0137389_104301382	3300012096	Vadose Zone Soil	MARKTKVTPQKEEVPEKAGPETPPESSLLDLSAAAVKKLIR
Ga0137346_10413011	3300012137	Soil	MASKSKVMPQKEEMLEKEGPETPPDSPLLDLSNAAVKAL
Ga0137388_106138953	3300012189	Vadose Zone Soil	MASKTKMTRQKEEVPEKGGPETPPDSPLLDLSNAAV
Ga0137365_108048912	3300012201	Vadose Zone Soil	MASKTEETPQKEEMLEMEGPETLPESPLLGLSDGAVREL
Ga0137379_113184941	3300012209	Vadose Zone Soil	MASNTNMPPQNEDVPEKVGPDTSPDSPLLDLSDAAVKTL
Ga0137370_103865112	3300012285	Vadose Zone Soil	MASKTEETPQKEEMPEMEGPETLPDSPLLGLADGAVRELVRC
Ga0137368_101812271	3300012358	Vadose Zone Soil	MASKTEETPQKEEMLEKDGPETLPDSPLLDLSDPAVKE
Ga0137360_108170631	3300012361	Vadose Zone Soil	MASKTKATPPHEEVLAKEGHESPPDRPLLDLSDAAV
Ga0150984_1011521491	3300012469	Avena Fatua Rhizosphere	MASKTEVTPQKEEVPEKEGPETPPDSPLLDLSDVAIKK
Ga0137397_113385022	3300012685	Vadose Zone Soil	MASKTEETPQKEEMPEKEGPETLSDSSLLDLSDAAVK
Ga0137394_107070122	3300012922	Vadose Zone Soil	MATKINATPQKEEVPKKEGPETSPDNPPLDLSDSAVKKHI
Ga0137359_116282461	3300012923	Vadose Zone Soil	MASSPKVTPPEDKVPEKGGSETPPDSPLLGLSDAAVKKLIRTAKK
Ga0137419_115197492	3300012925	Vadose Zone Soil	MASKTEVTPQKEEVPEKEGPETPPDSPLLDLSDAAIKK
Ga0137410_102028344	3300012944	Vadose Zone Soil	MASKTNATPRKEEVPNKEGPETPPDSPLLDLSGAA
Ga0164304_109691151	3300012986	Soil	MASKTEETPQKEEMMEKDGPETLPDSTLLDPSDPAVKELIRS
Ga0164305_108900562	3300012989	Soil	MASEIEETPQKEEMLEKDGPETLPDSPLLDLSDPAV
Ga0163163_112109122	3300014325	Switchgrass Rhizosphere	MASKTEVAPQKEEVPEKEGPETPPDSPLLDLSDVAINKLV
Ga0132258_115680434	3300015371	Arabidopsis Rhizosphere	MPSKTKVTPQKEPVLAKEGHETLPDRPLLDLLDAAVKKLIRTAK
Ga0132256_1032101871	3300015372	Arabidopsis Rhizosphere	MPSKTKVTPQKEPVLAKEGPETLPDRPLLDLLDAAV
Ga0132257_1031482121	3300015373	Arabidopsis Rhizosphere	MASKTNVTPQKEELEMEGPATPPDSPQLGLSNAAIKALIRTA*
Ga0182041_108471352	3300016294	Soil	MASNTKRTPLKEEVLEKEGPEIRPDSPLLDLSDAAIKKLIRS
Ga0182033_121085501	3300016319	Soil	MASKTEETPQKEEMLEIEGPETLPESPLLGLSDGAV
Ga0182035_111997411	3300016341	Soil	MASKTKVTPQKEGAPEKEGADTLPDCPLLDLCDVAVK
Ga0182035_121325231	3300016341	Soil	MASNTKMSPLKEEVLEKEGPEIRPDSPLLDLSDAAIKKLI
Ga0182034_113997242	3300016371	Soil	MASKTKVTPQEGEVPETAGPKTPPDSPLLDLPDAAV
Ga0182040_118245621	3300016387	Soil	MASKTEETPQKEKMPEKEGPDTLPDSPLLDPSDAAVK
Ga0182037_113965601	3300016404	Soil	MASKTEETPQKEEMPEKDGPETLSDSPLRDLSDPAVKD
Ga0182039_108680661	3300016422	Soil	MASNTKRTPLKEEVLEKEGPEIRPDSPLLDLSDAAIKKLIR
Ga0182039_116229561	3300016422	Soil	MAKTEETPQKQEMLEKEGPETLPDSPLLDLSDPAV
Ga0182039_116756741	3300016422	Soil	MASTSKVTPQKEEVPEKEGADTLPDCPLLDLSDAAVKK
Ga0182039_121125931	3300016422	Soil	MASKVKMPPLKEEVLEKEGPEIRPDSPLLDLSDAAIK
Ga0182038_102225901	3300016445	Soil	MASKTKVTPPEVEVPETAGPETPPDSPLLDLPDAAVKKLI
Ga0182038_121275821	3300016445	Soil	MASKTKVTPQKEEVPEKVGADTLPDCPLLDLSDAAVKK
Ga0187802_103675591	3300017822	Freshwater Sediment	MASKINVMPKEEMLEKEGPETQSDRPLLDLSAVAVKELI
Ga0184623_104404031	3300018056	Groundwater Sediment	MASKTEVTPQKEEVLEKEGPETPPDSPLLDLSDVAIKKL
Ga0190265_138069511	3300018422	Soil	MASKTKAMPQKEEAPEKEAGDSPDSPLLDLSDAAV
Ga0066667_109964821	3300018433	Grasslands Soil	MASKTKITPQKEEMLEKEEGPETPPDRPLFDLWNASVKALIRTTKERG
Ga0066662_107591792	3300018468	Grasslands Soil	MASNTNMPPQNEDVPEKVGPDTSPDSPLLDLSDAAV
Ga0193734_10809941	3300020015	Soil	MASKAEVTPQKEEVLEKEGPETPPDSPLLDLSDAAI
Ga0193719_100369044	3300021344	Soil	MANKTIATPQKEELPKKEGPETPPDSPPLDLSDAA
Ga0210393_102495721	3300021401	Soil	MASKTKVTVQEEAVPPETEGATTLPDSPLLDVADGAV
Ga0210385_101042401	3300021402	Soil	MASKTVVTPLKGEMLEKEGPEAPPDSPLLDLSDMA
Ga0193709_11017641	3300021411	Soil	MASKTEVTPQKEEVAEKEGPETPPDSPLLDLSDVAI
Ga0210391_102070171	3300021433	Soil	MASKTKVTPQKEVMLEKEGRETPPGSPLLDLSDAAVKKLI
Ga0209538_12092651	3300025846	Arctic Peat Soil	MASKTNATPQKEEVPKKEGPETSPDSPLLDLSDAA
Ga0209483_10774501	3300025862	Arctic Peat Soil	MASKTNATPKQEDVPKKEGTETPPDSPLLDLSDAAVKK
Ga0209540_101480681	3300025888	Arctic Peat Soil	MASKTNATPQKEEVPKKEGPETSPGSPLLDLSDAAVKK
Ga0207693_102665672	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MASDTKATSQKEDLPEKETPESAPDSPLLDLSDAAVKKLI
Ga0207700_116467151	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MASKTDETPQGEEVLEKPLETPSDIPLLDLSDPAVGN
Ga0209350_10865952	3300026277	Grasslands Soil	MASKTKETPQKEEMPEKEGRETLPDSPLLDLSDAAVKK
Ga0209055_11232922	3300026309	Soil	MATKTNATPQKEEVPKNEGPETPPDSPPLNLSDAAVKKLI
Ga0209160_10771623	3300026532	Soil	MASKTKETPQKQEMPEKEGPETLPDSPLLDLSDAAVKKF
Ga0207763_10050003	3300026879	Tropical Forest Soil	MASKAKMTRQKENVSEEGPETPPDNPLLDLSDAAVKKFIRAV
Ga0207780_10826901	3300027313	Tropical Forest Soil	MASNTKMTPLKEEVLEKECPEIRPDSPLLDLSDAAIK
Ga0209117_11353172	3300027645	Forest Soil	MASKTKVTPQKEEMLEKEGPETPPDSPLIDRSNASVKA
Ga0209283_108032431	3300027875	Vadose Zone Soil	MANKTKVTPQKDKVPEKEGQETPSDSPLLDLSDAA
Ga0209590_109330301	3300027882	Vadose Zone Soil	MASKTEETPQKEEMPEKEGPETLPDDLSDAAITKLIR
Ga0207428_106207131	3300027907	Populus Rhizosphere	MANKTKVTPQKDKVPEKGGSETPPDSPLLDLVADLRAS
Ga0307293_101921401	3300028711	Soil	MASKTEVTRQTQEASERDGRETPSDGPLLDLSDAAVKKLIHSA
Ga0307298_101911771	3300028717	Soil	MANKTIATPEKEEVPKKEGPETPPDSPLLDLSDAAIKK
Ga0307282_103419262	3300028784	Soil	VRAQRRLWRFMASNTDVTPQKEEVSKNEGPETPPDSPLL
Ga0307284_104473291	3300028799	Soil	MANKTIATPQKEEVPKKEGPETPPDSPPLDLSDAAVKKLIR
Ga0307277_100292534	3300028881	Soil	MATNTNATPQKEEVPKNEGPETPPDSPPLNLSDAAVK
Ga0307308_101926343	3300028884	Soil	MERLIATNATPQKKEAPKKEGPETPPDSPPLDLSDAAV
Ga0222749_106874711	3300029636	Soil	MATNTNATPQKEEVPKNEGPETPPDSPPLNLSDAAVKKLIRSAKK
Ga0307482_11620011	3300030730	Hardwood Forest Soil	MASKIKVIPQKEEILEKEGPETQSDRTLLDLSAAAVKE
Ga0308200_10642432	3300030905	Soil	MATKTNATPQKEEVPKKEGPETPPDSPPLYLSDSAVKKLI
Ga0308196_10306801	3300030989	Soil	QPRLWRLMASKTEVTPQTEEVPEKEGLETPPDSPLLDLSDAAIK
Ga0265760_102835811	3300031090	Soil	MASKIKVMPQKEEMLEKEGPETQSDRPLLDLSAAAVKVADPQRQ
Ga0318528_104026701	3300031561	Soil	MASKIKVTPQKVEVPETAGLETPPDSPLLDLLDAAV
Ga0310915_108702391	3300031573	Soil	MASKTEETPQKEEMPEMEGPETLPDSPLLGLSDGAV
Ga0310915_112499041	3300031573	Soil	MVSKTGEMPQKEEMPEKEGPETLPDSPLLDLSDAAVK
Ga0318555_102968733	3300031640	Soil	MASKTEETPQKEEMLEIEGPETLTDSPLLGLSDGAVRE
Ga0318542_103382321	3300031668	Soil	MASKTEETSQKEEMPEMEGPETLPDSPLLGLSDGAVREL
Ga0306917_103026192	3300031719	Soil	MASKTEETPQKEEMLEIEGPETLPESPLLGISDGAVRELVRSAKK
Ga0306917_108527281	3300031719	Soil	MASKTEETPQKEEMPEKEGPETLPDSPLLDLSDAAVKKL
Ga0318493_103855601	3300031723	Soil	MASKTQETPQKEPEKEGPETLPDSPRLDLSDAAIKELIR
Ga0307468_1017794081	3300031740	Hardwood Forest Soil	MASKTEQTPQKQEMLEMEGPETLPDSPLLGLSDGAVRELVRFA
Ga0306918_101242534	3300031744	Soil	MVSKTGEMPQKEEMPEKEGPETLPDSPLLDLSDAAVKK
Ga0318492_100208491	3300031748	Soil	MASKTEETPQKEEMLEIKGPETLPESPLLGLSDGAVRELVRSAKKR
Ga0318521_103767942	3300031770	Soil	MASKNEETPQKEEILEMEGAETLPERPLLGLSDGAVR
Ga0318546_110236462	3300031771	Soil	MASKIKVTPQKVEVPETAGLETPPDSPLLDLLDAAVKNLIRSAEK
Ga0318498_105079921	3300031778	Soil	MASNTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAAINK
Ga0318529_100991122	3300031792	Soil	MASKTEETPQKEEMLEMEGPETLPESPLLGLSDGAVRELVRSAK
Ga0318557_101232532	3300031795	Soil	MASNTKMTPLKEEVLEKEGPEIRPDSPLLDLSDASIKKLIG
Ga0318576_103940593	3300031796	Soil	MASDIKAMSHKEDLPEKETPESAPDRPLLDFSDAAVKKAPPHR
Ga0318550_101159993	3300031797	Soil	MASDTKATSHKEDLPEKETPESAPDRPLLDLSDAAVKKLIS
Ga0318497_108803391	3300031805	Soil	MASKTKVTPQKEGAPEKEGADTLPDCPLLDLSDAVVKKLIR
Ga0318499_101765702	3300031832	Soil	MASNIKTTPQKEEMKEGPETLPDSPLLELSDAAVKKL
Ga0318511_103236341	3300031845	Soil	MASKTEETPQKEEMLEMEGPETLPDSPLLGLSDGAV
Ga0306919_104937073	3300031879	Soil	MASHTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAAIKKLIRSANK
Ga0306919_111783001	3300031879	Soil	MASKTEETPQKEEMQEKEGPETLPDSPLLDLSDAAVKKL
Ga0318544_103755912	3300031880	Soil	MASKTGETPQKEEMLEMEGPETLTDSPLPGLSDGAVRELVRSAKKRG
Ga0318522_103826201	3300031894	Soil	MASKAKMTRQKENVSEEGPETPPDNPLLDLSDAAVKKHPRC
Ga0306923_112019001	3300031910	Soil	MASKTEETPQKEEMLEMEGPETLPDSPLLGLSDRAVRELV
Ga0306923_122289121	3300031910	Soil	MASKTEETPQKEEMPEKEGPETLPDSPLLGLSGGAVRELARSAK
Ga0310912_102046703	3300031941	Soil	MASKTEETPQKEEMPEKEGPETLPDSPLLDLSDAAVKK
Ga0310912_115272051	3300031941	Soil	MASKTEETPQKEEMPEKDGPETLSDSPLRDLSDPAVKDLIHS
Ga0310916_106246663	3300031942	Soil	MASKAKLTLQKENVPEQEGPETPPDNPLLDLSDAAVKKFIRAV
Ga0310916_108350732	3300031942	Soil	MASNTKMTPLKEEVLEKEGPEIRPDSPLLDLSDAAIK
Ga0310913_104555432	3300031945	Soil	MASKAKMTRQKENVSEEGPETPPDNPLLDLSDAVK
Ga0310910_111730082	3300031946	Soil	MASKTEETPQKEEMLEMEGPETLPESPLLGLSDGA
Ga0310909_112232172	3300031947	Soil	MASKTEETPQKEEMLEMEGPETLPDSPLLGLSDRAVREL
Ga0306926_117187041	3300031954	Soil	MTSKTETPQKEEMLKKDGSETLPDSPLLDLSDPAVKELIRSAKK
Ga0306926_122737701	3300031954	Soil	MASKTEETPQKEEMLEIEGPETLPESPLLGLSDGAVREL
Ga0318530_101832871	3300031959	Soil	MASKTEETSQKEEMPEKEGPETLPDSPLLDLSDAAVKK
Ga0318530_104812412	3300031959	Soil	MASKTGETPQKEEMLEMEGPETLTDSPLPGLSDGAVRELVR
Ga0318531_100879693	3300031981	Soil	MASKNEETPQKEEILEMEGAETLPERPLLGLSDGAV
Ga0306922_105374334	3300032001	Soil	MASKTEETPQKEEMPEKEGPETLPDSPLLGPSDAAVKKL
Ga0306922_107000011	3300032001	Soil	MAKTEETPQKQEMLEKEGPETLPDSPLLDLSDPAVPELIRSAK
Ga0310911_103766561	3300032035	Soil	MASKTEETPQKEEMPEKGGPETLPHDLSGAAITKLIRS
Ga0318545_100936462	3300032042	Soil	MASKTEETPQKEEMPEMEGPETLPDSPLLGLSDGAI
Ga0318505_102303562	3300032060	Soil	MASKTEKTPQKEEMLEIEGPETLPESPLLGISDGAV
Ga0318514_104055421	3300032066	Soil	MASKTEETPQKEEMLEMEGPETLPDSPLLGLSDGAVRELVRS
Ga0318553_102632933	3300032068	Soil	MASDTKATSHKEDLPEKETPESAPDRPLLDLSDAA
Ga0318553_107376722	3300032068	Soil	MASDIKAMSHKEDLPEKETPESAPDRPLLDFSDAAVKKAPPHRQE
Ga0318540_105195221	3300032094	Soil	MASDIKAMSHKEDLPEKETPESAPDRPLLDFSDAAVKKAPPHRQET
Ga0311301_102134211	3300032160	Peatlands Soil	MASKTKVTPQKEVMLEKEGRETPPGSPLLDLSDAAVKK
Ga0306920_1006923181	3300032261	Soil	MASKTEETPQKEEMPEKEGPETLPDSPLLDLSDAAV
Ga0306920_1034614352	3300032261	Soil	MASKTEETPQKEEMLEIEGPETLPESPLLGLSDGAVRELVRSAK
Ga0318519_100690671	3300033290	Soil	MASKTGETPQKEEMLEMEGPEALTDSPLLDLSDAAVR
Ga0364927_0132264_3_107	3300034148	Sediment	MTSKTNVTPQKEEVPEKEGPETPPDGPLLDLSDAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037836

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences