NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F037644

Metagenome Family F037644

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F037644
Family Type Metagenome
Number of Sequences 167
Average Sequence Length 75 residues
Representative Sequence MSSDPLELKEKFQAEYHARWEAVEVFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS
Number of Associated Samples 129
Number of Associated Scaffolds 167

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.73 %
% of genes near scaffold ends (potentially truncated) 30.54 %
% of genes from short scaffolds (< 2000 bps) 83.23 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (52.695 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(14.371 % of family members)
Environment Ontology (ENVO) Unclassified
(42.515 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(30.539 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.54%    β-sheet: 0.00%    Coil/Unstructured: 51.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 167 Family Scaffolds
PF08843AbiEii 34.13
PF03466LysR_substrate 2.99
PF02661Fic 1.80
PF02810SEC-C 1.80
PF05731TROVE 1.20
PF01850PIN 1.20
PF01936NYN 1.20
PF16352DUF4980 1.20
PF01145Band_7 1.20
PF00266Aminotran_5 0.60
PF00782DSPc 0.60
PF09414RNA_ligase 0.60
PF03471CorC_HlyC 0.60
PF00180Iso_dh 0.60
PF01578Cytochrom_C_asm 0.60
PF03372Exo_endo_phos 0.60
PF12543DUF3738 0.60
PF01381HTH_3 0.60
PF01258zf-dskA_traR 0.60
PF07589PEP-CTERM 0.60
PF00691OmpA 0.60
PF00932LTD 0.60
PF13370Fer4_13 0.60
PF01663Phosphodiest 0.60
PF04545Sigma70_r4 0.60
PF05199GMC_oxred_C 0.60
PF08482HrpB_C 0.60
PF00854PTR2 0.60
PF13620CarboxypepD_reg 0.60
PF07944Glyco_hydro_127 0.60
PF00535Glycos_transf_2 0.60
PF03781FGE-sulfatase 0.60
PF02965Met_synt_B12 0.60
PF03062MBOAT 0.60
PF02837Glyco_hydro_2_N 0.60
PF04055Radical_SAM 0.60
PF03551PadR 0.60
PF17132Glyco_hydro_106 0.60
PF04307YdjM 0.60
PF00756Esterase 0.60
PF13408Zn_ribbon_recom 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 167 Family Scaffolds
COG2253Predicted nucleotidyltransferase component of viral defense systemDefense mechanisms [V] 34.13
COG1432NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturationGeneral function prediction only [R] 1.20
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.60
COG1410Methionine synthase I, cobalamin-binding domainAmino acid transport and metabolism [E] 0.60
COG1643HrpA-like RNA helicaseTranslation, ribosomal structure and biogenesis [J] 0.60
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.60
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.60
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 0.60
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.60
COG1988Membrane-bound metal-dependent hydrolase YbcI, DUF457 familyGeneral function prediction only [R] 0.60
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.60
COG3104Dipeptide/tripeptide permeaseAmino acid transport and metabolism [E] 0.60
COG3250Beta-galactosidase/beta-glucuronidaseCarbohydrate transport and metabolism [G] 0.60
COG3533Beta-L-arabinofuranosidase, GH127 familyCarbohydrate transport and metabolism [G] 0.60


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.69 %
UnclassifiedrootN/A47.31 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c1092847All Organisms → cellular organisms → Bacteria10402Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100569445Not Available911Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101599961Not Available1367Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101721749All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales2508Open in IMG/M
3300000579|AP72_2010_repI_A01DRAFT_1054505All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300000789|JGI1027J11758_12164796Not Available507Open in IMG/M
3300000955|JGI1027J12803_105541320All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300001213|JGIcombinedJ13530_102305685Not Available799Open in IMG/M
3300001213|JGIcombinedJ13530_102823113Not Available550Open in IMG/M
3300001213|JGIcombinedJ13530_105323103All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300004092|Ga0062389_101521774All Organisms → cellular organisms → Bacteria → Proteobacteria852Open in IMG/M
3300004157|Ga0062590_101705838Not Available642Open in IMG/M
3300005174|Ga0066680_10726818All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300005179|Ga0066684_10105016All Organisms → cellular organisms → Bacteria1737Open in IMG/M
3300005330|Ga0070690_100122332Not Available1748Open in IMG/M
3300005338|Ga0068868_100579257All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300005340|Ga0070689_100187730All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300005355|Ga0070671_101437054Not Available610Open in IMG/M
3300005445|Ga0070708_101151307Not Available726Open in IMG/M
3300005446|Ga0066686_10468581Not Available859Open in IMG/M
3300005468|Ga0070707_100273855All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300005544|Ga0070686_100117993All Organisms → cellular organisms → Bacteria1818Open in IMG/M
3300005545|Ga0070695_100477621Not Available960Open in IMG/M
3300005549|Ga0070704_100430820Not Available1131Open in IMG/M
3300005560|Ga0066670_10249834Not Available1075Open in IMG/M
3300005561|Ga0066699_11179548Not Available526Open in IMG/M
3300005577|Ga0068857_100004181All Organisms → cellular organisms → Bacteria12150Open in IMG/M
3300005618|Ga0068864_100685304Not Available1000Open in IMG/M
3300005836|Ga0074470_11818221Not Available3985Open in IMG/M
3300005841|Ga0068863_100131171All Organisms → cellular organisms → Bacteria2393Open in IMG/M
3300006797|Ga0066659_10423758All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300006797|Ga0066659_10447335All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300006797|Ga0066659_11947192Not Available500Open in IMG/M
3300006800|Ga0066660_10642200All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300006800|Ga0066660_10696459All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300006800|Ga0066660_10867779All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300006800|Ga0066660_11214333Not Available591Open in IMG/M
3300006854|Ga0075425_102050440Not Available639Open in IMG/M
3300009012|Ga0066710_100298409All Organisms → cellular organisms → Bacteria2359Open in IMG/M
3300009012|Ga0066710_102418980All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300009094|Ga0111539_11358408All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium824Open in IMG/M
3300009137|Ga0066709_102845107Not Available640Open in IMG/M
3300009156|Ga0111538_13333933Not Available558Open in IMG/M
3300009175|Ga0073936_10001786All Organisms → cellular organisms → Bacteria32813Open in IMG/M
3300009444|Ga0114945_10446909All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300009553|Ga0105249_10542835Not Available1212Open in IMG/M
3300009553|Ga0105249_12898309Not Available551Open in IMG/M
3300009777|Ga0105164_10032413Not Available2871Open in IMG/M
3300010159|Ga0099796_10030830All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1743Open in IMG/M
3300010341|Ga0074045_10383513Not Available913Open in IMG/M
3300010391|Ga0136847_10757355Not Available692Open in IMG/M
3300010403|Ga0134123_11041440All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300010403|Ga0134123_11609018Not Available698Open in IMG/M
3300011269|Ga0137392_10907375All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300011270|Ga0137391_10500387Not Available1029Open in IMG/M
3300011270|Ga0137391_11105554All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium641Open in IMG/M
3300011436|Ga0137458_1065238Not Available1000Open in IMG/M
3300011444|Ga0137463_1257582Not Available650Open in IMG/M
3300012202|Ga0137363_10733151All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300012202|Ga0137363_11140236All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300012202|Ga0137363_11365535Not Available598Open in IMG/M
3300012205|Ga0137362_10130709All Organisms → cellular organisms → Bacteria2135Open in IMG/M
3300012205|Ga0137362_11326571Not Available605Open in IMG/M
3300012207|Ga0137381_11256268Not Available634Open in IMG/M
3300012211|Ga0137377_11607524All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300012212|Ga0150985_118090445All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300012212|Ga0150985_119067824All Organisms → cellular organisms → Bacteria4504Open in IMG/M
3300012350|Ga0137372_10253387Not Available1383Open in IMG/M
3300012353|Ga0137367_10256101Not Available1258Open in IMG/M
3300012353|Ga0137367_10517124All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300012354|Ga0137366_10997357All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300012361|Ga0137360_11649453Not Available546Open in IMG/M
3300012469|Ga0150984_114341583All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300012469|Ga0150984_115527616All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300012685|Ga0137397_10063659Not Available2662Open in IMG/M
3300012923|Ga0137359_10466210Not Available1117Open in IMG/M
3300012923|Ga0137359_11779733Not Available503Open in IMG/M
3300012930|Ga0137407_11895622Not Available568Open in IMG/M
3300012931|Ga0153915_10207365Not Available2153Open in IMG/M
3300013297|Ga0157378_11918256Not Available642Open in IMG/M
3300013306|Ga0163162_10825321All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1043Open in IMG/M
3300014502|Ga0182021_10522232Not Available1417Open in IMG/M
3300014502|Ga0182021_12730988All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia593Open in IMG/M
3300014502|Ga0182021_13261701All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300015054|Ga0137420_1501141All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula5965Open in IMG/M
3300015241|Ga0137418_10581768All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300015241|Ga0137418_11123710Not Available558Open in IMG/M
3300017931|Ga0187877_1360696Not Available551Open in IMG/M
3300018021|Ga0187882_1067045All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300018057|Ga0187858_10066362Not Available2532Open in IMG/M
3300018059|Ga0184615_10192264All Organisms → cellular organisms → Bacteria → Acidobacteria1149Open in IMG/M
3300018079|Ga0184627_10323412All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300018468|Ga0066662_10004854All Organisms → cellular organisms → Bacteria6560Open in IMG/M
3300019884|Ga0193741_1000963All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia8460Open in IMG/M
3300019890|Ga0193728_1025568All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia2945Open in IMG/M
3300020057|Ga0163151_10155833Not Available1398Open in IMG/M
3300020074|Ga0194113_10868406Not Available612Open in IMG/M
3300020109|Ga0194112_10977781Not Available538Open in IMG/M
3300020163|Ga0194039_1051956Not Available1525Open in IMG/M
3300020199|Ga0179592_10533169All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300020221|Ga0194127_10462525All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300021073|Ga0210378_10008426All Organisms → cellular organisms → Bacteria4483Open in IMG/M
3300021168|Ga0210406_10278120All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1367Open in IMG/M
3300021411|Ga0193709_1000023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales75498Open in IMG/M
3300021602|Ga0194060_10213234Not Available988Open in IMG/M
3300021605|Ga0194054_10014911All Organisms → cellular organisms → Bacteria → PVC group3043Open in IMG/M
3300023091|Ga0224559_1028211All Organisms → cellular organisms → Bacteria2327Open in IMG/M
(restricted) 3300023177|Ga0233423_10110733Not Available1172Open in IMG/M
3300025327|Ga0209751_10851894All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300025930|Ga0207701_11148942All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300025936|Ga0207670_10265548All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300026116|Ga0207674_10005835All Organisms → cellular organisms → Bacteria14602Open in IMG/M
3300026116|Ga0207674_10076363All Organisms → cellular organisms → Bacteria3358Open in IMG/M
3300026319|Ga0209647_1038787All Organisms → cellular organisms → Bacteria2694Open in IMG/M
3300026530|Ga0209807_1005918All Organisms → cellular organisms → Bacteria6047Open in IMG/M
3300026552|Ga0209577_10162730All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300027896|Ga0209777_10038820All Organisms → cellular organisms → Bacteria4423Open in IMG/M
3300027900|Ga0209253_10470258All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300031576|Ga0247727_11004566All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium575Open in IMG/M
3300031716|Ga0310813_10149726All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1876Open in IMG/M
3300031746|Ga0315293_10590008Not Available844Open in IMG/M
3300031834|Ga0315290_11366912Not Available581Open in IMG/M
3300031902|Ga0302322_103056925All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300031996|Ga0308176_12029165All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300031997|Ga0315278_11658359All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300031997|Ga0315278_12004118Not Available541Open in IMG/M
3300032143|Ga0315292_11279701Not Available601Open in IMG/M
3300032143|Ga0315292_11681473All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300032156|Ga0315295_10413622All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300032164|Ga0315283_10572039Not Available1225Open in IMG/M
3300032164|Ga0315283_10847070Not Available977Open in IMG/M
3300032256|Ga0315271_10727982All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia853Open in IMG/M
3300032256|Ga0315271_11175305All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300032275|Ga0315270_11206791Not Available504Open in IMG/M
3300032397|Ga0315287_11653985Not Available718Open in IMG/M
3300032516|Ga0315273_10609200All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300032516|Ga0315273_11491224Not Available832Open in IMG/M
3300032516|Ga0315273_11928282Not Available705Open in IMG/M
3300032770|Ga0335085_11702651All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300032770|Ga0335085_11771345All Organisms → cellular organisms → Bacteria → PVC group634Open in IMG/M
3300032782|Ga0335082_10996460Not Available702Open in IMG/M
3300032783|Ga0335079_10299792All Organisms → cellular organisms → Bacteria1755Open in IMG/M
3300032783|Ga0335079_11076198Not Available816Open in IMG/M
3300032828|Ga0335080_11224883Not Available753Open in IMG/M
3300032829|Ga0335070_11163370Not Available708Open in IMG/M
3300032893|Ga0335069_10530071Not Available1361Open in IMG/M
3300032897|Ga0335071_10061397All Organisms → cellular organisms → Bacteria3697Open in IMG/M
3300032897|Ga0335071_10290984Not Available1587Open in IMG/M
3300032897|Ga0335071_12126942Not Available504Open in IMG/M
3300033004|Ga0335084_11135282All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300033158|Ga0335077_10971628Not Available850Open in IMG/M
3300033233|Ga0334722_10833444Not Available652Open in IMG/M
3300033418|Ga0316625_100581059Not Available909Open in IMG/M
3300033480|Ga0316620_10855739Not Available876Open in IMG/M
3300033482|Ga0316627_101743741Not Available639Open in IMG/M
3300033486|Ga0316624_10794072Not Available841Open in IMG/M
3300033489|Ga0299912_10532161All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium940Open in IMG/M
3300033513|Ga0316628_100757890All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300033513|Ga0316628_101257548All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300033513|Ga0316628_101689109Not Available843Open in IMG/M
3300033521|Ga0316616_102179899All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium738Open in IMG/M
3300033521|Ga0316616_103576639Not Available585Open in IMG/M
3300033521|Ga0316616_103582949Not Available585Open in IMG/M
3300033557|Ga0316617_102284173All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium559Open in IMG/M
3300033743|Ga0334844_114609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia534Open in IMG/M
3300034169|Ga0370480_0189684All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium698Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.37%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil14.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.98%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.40%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.99%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.80%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.80%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.80%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.80%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.80%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.20%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.20%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.20%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.20%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.20%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.20%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.60%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.60%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion0.60%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.60%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.60%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.60%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.60%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.60%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.60%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.60%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.60%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.60%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.60%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.60%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.60%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.60%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000579Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01EnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020163Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8mEnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021602Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5mEnvironmentalOpen in IMG/M
3300021605Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10mEnvironmentalOpen in IMG/M
3300023091Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34EnvironmentalOpen in IMG/M
3300023177 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MGEnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033743Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9EnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_109284732228664022SoilMSSEPHELKEERANYYACWEAVEIIKAHELAAMTDERAREIIRTLRPFMAIEPDPLNGMGLVEQQKIFRKSKEWGRLQPDPAT
INPhiseqgaiiFebDRAFT_10056944513300000364SoilAGYTFGMSSDPFELKERPEYHARWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPLNGMGLVEQQAIFHRRKLS*
INPhiseqgaiiFebDRAFT_10159996123300000364SoilLSVSSEPSDLNERRAAYRARWEAVDTARAQELAALTEERAAQLIRTLRPFMPVPPDPFNGMGLVEQQAILHGRRRP*
INPhiseqgaiiFebDRAFT_10172174923300000364SoilMSSEPHELKEERANYYACWEAVEIIKAHELAAMTDERAREIIRTLRPFMAIEPDPLNGMGLVEQQKIFRKSKEWGRLQPDPAT*
AP72_2010_repI_A01DRAFT_105450523300000579Forest SoilMSSDSLEMNDARAAYYARWEAVEAVKAQEIAAMTEERAWKIIRSLKPFGPTYRDPLNGMGLVEQQAIFHRRKPS*
JGI1027J11758_1216479613300000789SoilMSSDPFESKERPEYHARWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVAQQAIFHRRKPS*
JGI1027J12803_10554132033300000955SoilMSSDPFESKERPEYHARWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPLNGMGLVEQQAIFHRRKLS*
JGIcombinedJ13530_10230568513300001213WetlandMRRGGAEKAITRWEAVATAHARELAEMTEERAWRIIRSLRPFMPVPANPDNGMGLVEQQAIFHRRKPQ*
JGIcombinedJ13530_10282311313300001213WetlandSMGSEPLKLQERLNAEYHARWEAVETFKAQELAALTEERAWEIIRTLRLCAPAPPNPMNGMGLVDQQAIFHRKKRWS*
JGIcombinedJ13530_10532310323300001213WetlandMSSDALELREAWREQYRARSEALEIIRTQELAAMTEERAREIIRSLRSFAPLPPDPLNGTGLVRQQAIFHGLKAE*
Ga0062389_10152177413300004092Bog Forest SoilMNSDSEAAAHHNDRGAEHRARWEAVEIIKAREWAAMTDERAWEIIRSLRPFNEPLRDPSNGMGLVEQQRIFHRRKGS*
Ga0062590_10170583833300004157SoilELREKFQAEYFARWEAVEIFKAHELAAMTEERAQQIIESLRLFAPAPPNRFNGMGLVEQQAIFHNLKHD*
Ga0066680_1072681823300005174SoilMSSDPLYLKEKARAEYHARWEAVETFKAQELAAMTEERARQIIRSLRPFTEPWRDPLNGMGLVEQQAIFHRRKPS*
Ga0066684_1010501643300005179Soil*ATEAN*TGNGRAARQFWLNVRTLIGYPIDVSSDPLELREKFRAEYHARWEAVETFKAHELAAMTEERAGQIISMLRLFAPVPPNQFNGEGLVEQQAIFHRRKS**
Ga0070690_10012233233300005330Switchgrass RhizosphereVSSDPDKLQEAREAYHARWEAVETVKAQELAAMTEERALQIIHSLCSFEDAPPDPSNGMGLVEQQAIFHRLKSR*
Ga0068868_10057925723300005338Miscanthus RhizosphereMSSDPQELKDAARAEYHARWEAVEAVKAQELAAMTEERAWQIIRSLRPFTDIPRDPLNGMGLVAQQEIFHRGK
Ga0070689_10018773013300005340Switchgrass RhizosphereSSDPDKLQEAREAYHARWEAVETVKAQELAAITEERALQIIHSLCSFEDAPPDPSNGMGLVEQQAIFHRLKSR*
Ga0070671_10143705423300005355Switchgrass RhizosphereMSSDPIEVKQRLQEEYQARWEAVETAKAQELAAMTEERAWQIIRSLRPFSEPWRDPLNGMGLVEQQAIFHRRKPA*
Ga0070708_10115130713300005445Corn, Switchgrass And Miscanthus RhizosphereMDSDSLELKEKLQREYHARWEAVAAFQAQELAAMTEERARKIIGMLRLFAPAPESPFNGLGLVEQQAIFHGRKA*
Ga0066686_1046858123300005446SoilARAEYHARWEAVETFKAQELAAMTEERARQIIRSLRPFTEPWRDPLNGMGLVEQQAIFHRRKPS*
Ga0070707_10027385523300005468Corn, Switchgrass And Miscanthus RhizosphereMSSDPLELKERFQAEYHARWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKRS*
Ga0070686_10011799333300005544Switchgrass RhizosphereMSSDPCELKERPEYHARWEAMEVFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVAQQAIFHRRKLS*
Ga0070695_10047762113300005545Corn, Switchgrass And Miscanthus RhizosphereMSSDPFELKERPEYHARWEAMEVFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVAQQAIFHRRKLS*
Ga0070704_10043082013300005549Corn, Switchgrass And Miscanthus RhizosphereDKNCGLRYTKSVSSDPDKLQEVREAYHARWEAVETVKAQELAAMTEERALQIIHSLCSFEDAPPDPSNGMGLVEQQAIFHRLKSR*
Ga0066670_1024983423300005560SoilMELEKTRTEYYARWEAVEIVKAHELAAMTGERGLQIIRSLRLFASAPPELFNGEDLVEQQAIFHRSKS*
Ga0066699_1117954823300005561SoilLNVRTLIGYPIDVSSDPLELREKFRAEYHARWEAVETFKAHELAAMTEERAGQIISMLRLFAPVPPNQFNGEGLVEQQAIFHRRKS*
Ga0068857_10000418183300005577Corn RhizosphereMDSEPLELKEERAQYHARWEAVEIFKAHELAAMTDEKARAIMRTLRPFTPIEPDPFNGSGLVEQQAIFHRRKR*
Ga0068864_10068530423300005618Switchgrass RhizosphereMSSDPLELKEKFQAEYHSRWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS*
Ga0074470_1181822173300005836Sediment (Intertidal)MLMSFDPLELKDARAEYYARWEAVETVKAHELAALTEERAWEMIRSLRPFTEPGRDPSNGMGLVEQQRIFHQRKNS*
Ga0068863_10013117133300005841Switchgrass RhizosphereVSSDPDKLQEAREAYHARWEAVETVKAQELAAITEERALQIIHSLCSFEDAPPDPSNGMGLVEQQAIFHRLKSR*
Ga0066659_1042375823300006797SoilVNPTPLELKGKLRAEYHARWEAVETFKAHELAAMTEERARKIIQSLELFAPVPPDPFNGMGLVEQQAIFHRRKA*
Ga0066659_1044733523300006797SoilMSSDPLEFKEKFQAEYHARWEAVETFKAQELAAMTEERAWQIIQSLRLFAPAPPNPLNGMGLVEQQAIFHRLKGP*
Ga0066659_1194719213300006797SoilMELKKARAEYYARGEALEIVKAHELAAMTDKRVLQIIRSLRLFAPASPKLFNGEGLVEQQAIFHRRKS*
Ga0066660_1064220023300006800SoilMELEKARTEYYARWEAVEIVKAHELAAMTGERGLQIIRSLRLFAPASPKLFNGEGLVEQQAIFHRRKS*
Ga0066660_1069645923300006800SoilMSSDALEFKEKFQAEYHARWEAVETFKAHELAAMTEERAWQIIQSLRLFAPAPPNPLNGMGLVEQQAIFHRLKGP*
Ga0066660_1086777913300006800SoilMSSDPLELKEKLKAEYHERWEAVETVKAHELAAMTEERAREIIRSLRLFAPAEPNRFNGLGLVKQQAIFHRRKS*
Ga0066660_1121433323300006800SoilMSSEPLDELKAKSQTEYYARWEAVETVKAQELAAMTEERAWQIIRSLRPFTEPCPDPSNGMGLVEQQAIFHRRKSS*
Ga0075425_10205044023300006854Populus RhizosphereVSSDPDKLQEAREAYHARWEAVETVKAQKLAAMTEERALQIIHSLCSFEDAPPDPSNGMGLVEQQAIFHRLKSR*
Ga0066710_10029840943300009012Grasslands SoilMSSDPLYLKEKARAEYHARWEAVETFKAQELAAMTEERARQIIRSLRPFTEPWRDPLNGMGLVEQQAIFHRRKPS
Ga0066710_10241898023300009012Grasslands SoilVNPTPLELREKFRAEHHARWEAVETFKAHELAAMTEERAWQIIRSLELFAPVPSDPFNGLGLVEQQAIFHRRKV
Ga0111539_1135840813300009094Populus RhizosphereVAGYTFGMSSDPLELKEKFQAEYHSRWEAVEIFKTHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQLVLLHRRKP
Ga0066709_10284510723300009137Grasslands SoilVNPTPLELKEKLRAEYHARWEAVETFKAHELAAMTEERARKIIQSLELFAPVPPDPFNGMGLVEQQAIFHRRKA*
Ga0111538_1333393313300009156Populus RhizosphereVAGYTFGMSSDPLELKEKFQAEYHSRWEAVEIFKTHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS*
Ga0073936_1000178633300009175Freshwater Lake HypolimnionMDSEPLKLQEKFATQYHARWEAVETVKAQELAALTEERAREIIHALRPFVPIPPKPLNGMGLVEQQAIFHKTRCP*
Ga0114945_1044690913300009444Thermal SpringsMSSETLELKEKLRAEHRARWEAVETFKAQELAAMTEERALRIIQSLRLFEPAPPNPLNGMGLVEQQAIFHRRQS*
Ga0105249_1054283523300009553Switchgrass RhizosphereMSSDPLELKEKFQAEYHARWEAVEVFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS*
Ga0105249_1289830923300009553Switchgrass RhizosphereMSSDPFELKERPEYHARWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPNPFNGMGLVAQQAI
Ga0105164_1003241313300009777WastewaterEKLRAEYFARWEAVEAFKAQELAAMTEERALQIIQSLRLFAPAPPNPLNGMGLVEQQAIFHRHKS*
Ga0099796_1003083033300010159Vadose Zone SoilMSSDPFELKEQRAAYHARWEAVETFKAHELAAMTDERALQIIQSLRLFAPAPPKLFNGEGLVEQQAIFHRRKS*
Ga0074045_1038351323300010341Bog Forest SoilMSSDPLELKDARAAYHARWEAVEIFKAHELAAMTEERARQIIQSLSCFTDIPPDPFNGMGLVEQQAIFHGRKSS*
Ga0136847_1075735513300010391Freshwater SedimentMSSDPLQLKEAFQAEYHARWEAVAAVQAQELAAMTEERAREIIQSLRLFAPVPPNPFNGTGLVEQQAIFHG
Ga0134123_1104144013300010403Terrestrial SoilMSSDPFELKERAEYHARWEAMEVFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVAQQAIFHRRKLS*
Ga0134123_1160901813300010403Terrestrial SoilMSSDPLELKEKARAEYYARWEAVETFKAHELASMTEERAFQIIRSIRLFAPASPKLFNGEGLVEQQAIFHRRSKS*
Ga0137392_1090737523300011269Vadose Zone SoilMSSDPLELKEAARAEYHARWEAVETFKAHELAALTEERAWQIIRLLRPFTTLAPDPFNGMGLVEQQAIFHRHKPS*
Ga0137391_1050038723300011270Vadose Zone SoilLRLNVAAQYGYDTCVSSDPLELKEAARAEYHARWEAVETFKAHELAAMTEERAWQIIRLLRPFTTLAPDPFNGMGLVEQQAIFHRHKPS*
Ga0137391_1110555423300011270Vadose Zone SoilLKEKARAEYHARWEAVETFKAQELAAMTEERAWQIIRSLRPFTEPWRDPSNGMGLVEQQAIFHRRK
Ga0137458_106523833300011436SoilARLAILFLVSFEPSDLNERRAAYRARWEAVETARAQELAALTEERAAQLIRSLRPFVAVPPDPLNGMGLVEQQAILHGRRRP*
Ga0137463_125758223300011444SoilMSSDPLELKEKLQAEYHARWEAIASFQAQELAAMTEERALQIIRSLRLFAPAPPNPFNGMGLVEQQAIFHRH
Ga0137363_1073315123300012202Vadose Zone SoilMSSDPFELKEQRAAYHARWEAVETFKAHELAAMTDERALQIIQSLRLFAPAPPKLFNGEGLVEQQAVFHRRKS*
Ga0137363_1114023623300012202Vadose Zone SoilSCLPGWKSIADSFGAIVYILRMSSEPLELKDKSQTEYYARWEAVETVKAQELAAMTEERAWQIIRSLRPFTEPCRDPSNGMGLVEQQAIFHRRKSS*
Ga0137363_1136553513300012202Vadose Zone SoilMSSDPLELKEAARAEYHARWEAVETFKAHELAAMTEERAWQIIRLLRPFTTLAPDPFNGMGLVEQQAIFHRHKPS*
Ga0137362_1013070923300012205Vadose Zone SoilVQQTSSGYNACMSSDPLHLKEKARAEYHARWEAVETFKAQELAAMTEERAWQIIRSLRPFTEPWRDPSNGMGLVEQQAIFHRRKP*
Ga0137362_1132657123300012205Vadose Zone SoilMKEKARAEYHARWEAVETFKAQELAAMTEERARQIIRMLRLFAPTPPNPFNGRGLIEQQAIFHRRKS*
Ga0137381_1125626823300012207Vadose Zone SoilMALWLSFAVESSGLLAGLKSIADSFGAFVYILHMSSEPLELKEKFQMEYYARWEAVEAVKAQELAAMTEERAWQIIRSLRPFTEPWRDPSNGMGLVEQQAIFHRRKSS*
Ga0137377_1160752413300012211Vadose Zone SoilMSSDPLYLKEKARAEYHARWEAVETFKAQELAAMTEERARQIIRSLRPFTEPWRDPLNGMGLV
Ga0150985_11809044523300012212Avena Fatua RhizosphereFMSSDPLEVNQKFQEEYQARWEAVETAKAQELAAMTEERAWQIIRSLRPFSEPWRDPLNGMGLVEQQAIFHGRKPR*
Ga0150985_11906782453300012212Avena Fatua RhizosphereMSSDPLELKEQRAAYLARWEAVETIKAHELAAMTDEKVRQIIKLLRPFAPLPPNPLNGMGLVEQQAIFRRRKQ*
Ga0137372_1025338763300012350Vadose Zone SoilAEYHARWEEVENFKAQELAAMTEERALQIIKSLRLFAPAQPKLFNGVGLVEQQAIFHRRKP*
Ga0137367_1025610143300012353Vadose Zone SoilGSMSSDPLELKEAFRAEYHARWEAVAAVHAQELAAMTEERAREIIQSLRPFAPVPPNPFNGMGLVEQQAIFHGLKS*
Ga0137367_1051712423300012353Vadose Zone SoilVSSDPQELKDKARAEYHARWEAVETFKAQELAAMTEERALQIIKSLRLFAPAQPKLFNGVGLVEQQAIFHRRKP*
Ga0137366_1099735713300012354Vadose Zone SoilKEKARAEYHARWEAVETFKAQELAAMTEERARQIIRSLRPFTEPWRDPLNGMGLVEQQAIFHRRKPS*
Ga0137360_1164945323300012361Vadose Zone SoilMKEKARAEYHARWEAVETFKAQELAAMTEERAQQIIRMLRLFAPTPPNPFNGRGLIEQQAIFHRRKS*
Ga0150984_11434158313300012469Avena Fatua RhizosphereMELKEARGAYFARWEAVEIFTAHELARLTEEQALRKILSLRLFAPAPPKLFNGEGLVEQQAIFHRRK*
Ga0150984_11552761623300012469Avena Fatua RhizosphereMSSDPLEVNQKFQEEYQARWEAVETAKAQELAAMTEERAWQIIRSLRPFSEPWRDPLNGMGLVEQQAIFHGRKAR*
Ga0137397_1006365933300012685Vadose Zone SoilMSSDPLELKEQRAAYHARWEAVETFKAHELAAMTDERALQIIQSLRLFAPAPPKLFNGEGLVEQQAIFHRRKA*
Ga0137359_1046621023300012923Vadose Zone SoilMDSDSLELKEKFQREYLAGWEAVAAFQAQELAAMTEERARRIIRMLRLFAPAPPSPFNGLGLVEQQAIFHRRKA*
Ga0137359_1177973313300012923Vadose Zone SoilLPGCKSIADSFGAFVYTLRMSSEPLELKDKSQTEYHARWEAVETVKAQELAAMTEERAWQIIRSLRPFTEPWRDPSNGMGL
Ga0137407_1189562223300012930Vadose Zone SoilMAADNREWPRYTIHMSSDPLELKEERAAYHARWEAVETFKAHELAAMTDERVRQIIKLLRPFAPLPPNPLNGMGLVEQQAIFHRRK*
Ga0153915_1020736533300012931Freshwater WetlandsMSLDPGDSTETLRADYQARWEAMETIRTQELAAMTEERALQIIRMLRLFAPIPSDPLNGMGLVEQQAIFHRLKS*
Ga0157378_1191825623300013297Miscanthus RhizosphereMSSAPFELKEKFQAEYHARWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPW*
Ga0163162_1082532123300013306Switchgrass RhizosphereMSSDPFELKERPEYHARWEAMEVFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS*
Ga0182021_1052223233300014502FenMSSNPLELNDAARAAYHARWEDVEIFKAQELAAMTEERARQIIQSLSCFTDIPPDPFNGIGLVEQQAIFHGHKSS*
Ga0182021_1273098813300014502FenMNYGSFELGTFREQYRARWEAVESARAQELAALTEERAWQMIRSLRPFAPLPPNPFNGEGLVAQQAIFHRRDPQ*
Ga0182021_1326170123300014502FenMSIEPMESREKLAAEYNARWEAVEIVKAQELAALTEERALEIIRSLRLLAPVPPNPLNGMGLVEQQATFHRKVR*
Ga0137420_150114193300015054Vadose Zone SoilVDVSSDPLDCRKPAPAYFARWEAVEAVRAQEIAALTEERVREIIQSLGLFAPVPLDPMNGMGLVEQQAIFHRRKS*
Ga0137418_1058176813300015241Vadose Zone SoilELREKFRAEYHARWEAVETFKAHELAAMTEERAQEIISMLRLFAPVPRNQFNGEGLVEQQAIFHGRANRQS*
Ga0137418_1112371013300015241Vadose Zone SoilMSSDAEALKEKARAEYYARWEAVETFKAHELAAMTDERAREIMRMLRPFTAIEPDPFNGMGLVEQQKIFRKSKAWGRLQPDPAT*
Ga0187877_136069633300017931PeatlandMSSDPLELNDAARAAYHARWEAVETFKARELAAMTEERAREIIQSLSCFTDIPPDPFNGMGLVEQQAIFHGHKSS
Ga0187882_106704533300018021PeatlandMSMGSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERAREMFRALRLFAPTPPNPMNGMGLVEQQAIFHRKKA
Ga0187858_1006636213300018057PeatlandRAAYHARWEAVETFKARELAAMTEERAREIIQSLSCFTDIPPDPFNGMGLVEQQAIFHGHKSS
Ga0184615_1019226423300018059Groundwater SedimentVFVSSEASDSDNARAQYHSRWEAVEAAQAQELFAMTEERAAQIIRSLRPFVPVPPDPFNGMGLVEQQAILHGRRRP
Ga0184627_1032341213300018079Groundwater SedimentMSSDPLQLKEAFQAEYHARWEAVAAVHAQELAAMTEERAREIIQSLRLFAPVPPNPFNGTGLVEQQAIFHGRKS
Ga0066662_1000485463300018468Grasslands SoilMSSEPLDELKAKSQTEYYARWEAVETVKAQELAAMTEERAWQIIRSLRPFTEPCPDPSNGMGLVEQQAIFHRRKSS
Ga0193741_1000963143300019884SoilMSSDPLRLKEAFQAEYHARWEAVAAVHAQELAAMTEERARKIIQSLRLFAPVPPNPFNGTGLVEQQAIFHGRKS
Ga0193728_102556823300019890SoilMSSDPLELRDKARAEYHARWEAVESVKAQELAAMTEERALEIIVSLRPFALVPPNSFNGLGLVEQQKIFHRRKP
Ga0163151_1015583313300020057Freshwater Microbial MatMSSDSDSQEMKEARAAYYARWEAVDTFKAHELAAMTEERAWQIIRSLRPFAEPWRDPSNGMGLVEQRVIFHGR
Ga0194113_1086840613300020074Freshwater LakeDFQYSVSMSSGSLGNQANSQADYLARWEAVAAVRAQELAALTEEKALRIICSLRLFMPVPPDPRNGMGLVEQQAIFHRRKP
Ga0194112_1097778123300020109Freshwater LakeGNQANSQADYLARWEAVAAVRAQELAALTEEKALRIICSLRLFMPVPPDPRNGMGLVEQQAIFHRRKP
Ga0194039_105195643300020163Anoxic Zone FreshwaterMDSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERAREMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKMQ
Ga0179592_1053316913300020199Vadose Zone SoilFGSLVYILRMSSEPLELKDKARREYYARWEAVETVKAQELAAMTEERAWQIIRSLRAFTEPCRDPSNGMGLVEQQAIFHRRKSS
Ga0194127_1046252523300020221Freshwater LakeMSSGSLGNQANSQADYLARWEAVAAVRAQELAALTEEKALRIICSLRLFMPVPPDPRNGMGLVEQQAIFHRRKP
Ga0210378_1000842663300021073Groundwater SedimentMSSDPLELKEAFQAEYHARWEAVAAVHAQELAAMSEERALEIIQSLRLFAPVPRNPFNGTGLVEQQAIFHGRKS
Ga0210406_1027812023300021168SoilMSSEPLELKEERAKYFARWEAVEILKAHELAAMTDERAREIMRDLRPFVPFEPDPFNGKGLVEQQAIFHRRKP
Ga0193709_1000023603300021411SoilMSSDPLELKEQRAAYHARWEAVETFKAHELAAMTDEKARQIIKLLRPFAPLPPNPLNGMGLVEQQAIFHRRKT
Ga0194060_1021323413300021602Anoxic Zone FreshwaterEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERAREMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKMQ
Ga0194054_1001491123300021605Anoxic Zone FreshwaterMDSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERAREMIHALRLFAPAPSNPMNGM
Ga0224559_102821133300023091SoilIWTIIPCMSSNPLELNDAARAAYHARWEDVEIFKAQELAAMTEERARQIIQSLSCFTDIPPDPFNGIGLVEQQAIFHGHKSS
(restricted) Ga0233423_1011073313300023177FreshwaterLSTASRAEYHARWEAVESLRAQELEALTEERAWEIIRSLRPFAEPWRDPANGMGLVEQQRIFHKLPPS
Ga0209751_1085189413300025327SoilAEYHARWEAVETFKARELAALTEERAWEMIRSLRPFTEPWRDPSNGMGLVEQQRIFHRRKHS
Ga0207701_1114894213300025930Corn, Switchgrass And Miscanthus RhizosphereQAEYHSRWEAVEIFKAHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS
Ga0207670_1026554823300025936Switchgrass RhizosphereVSSDPDKLQEAREAYHARWEAVETVKAQELAAITEERALQIIHSLCSFEDAPPDPSNGMGLVEQQAIFHRLKSR
Ga0207674_10005835173300026116Corn RhizosphereMDSEPLELKEERAQYHARWEAVEIFKAHELAAMTDEKARAIMRTLRPFTPIEPDPFNGSGLVEQQAIFHRRKR
Ga0207674_1007636323300026116Corn RhizosphereVAGYTFGMSSDPLELKEKFQAEYHSRWEAVEIFKTHELAAMTEERARQIIRSLRPFTALPPDPFNGMGLVEQQAIFHRRKPS
Ga0209647_103878713300026319Grasslands SoilIADSFGAIVYILRMSSEPLELKDKSQTEYYARWEAVETVKAQELAAMTEERAWQIIRSLRPFTEPCRDPSNGMGLVEQQAIFHRRKSS
Ga0209807_100591843300026530SoilLNVRTLIGYPIDVSSDPLELREKFRAEYHARWEAVETFKAHELAAMTEERAGQIISMLRLFAPVPPNQFNGEGLVEQQAIFHRRKS
Ga0209577_1016273043300026552SoilMELKKARAEYYARGEAVEIVKAHELAAMTDKRVLQIIRSLRLFAPASPKLFNGEGLVEQQAIFHRRKS
Ga0209777_1003882033300027896Freshwater Lake SedimentMTMSSEPLTFQEKQAAEYHARWEAVEVVKAQELAAMTNERALEIIRSLRLFAPAPPNPLNGMGLVEQQAVFHQKRR
Ga0209253_1047025823300027900Freshwater Lake SedimentMNMSSDPPELQKKLQADYLARWEAVETARAQDLAAMTEERARQIIYSLRLFAPVPPDPYNGMGLVEQQAIFHGHKS
Ga0247727_1100456623300031576BiofilmMSSDPLELKDKLPAEYNARWEAVETARAQELAAMTEERARQIIQSLRLFAPVPPDPLNGMGLVEQQNILHGRRPR
Ga0310813_1014972623300031716SoilMSSEPLELKEERAKYYARWEAVETFKAHELAAMTDERAREIMRDLRPFTPFEPDPFNGMGLVEQQKIFRKSKEWGHLQFDRSN
Ga0315293_1059000813300031746SedimentVVDFPSFQYSVNMSSDSFNMKALLRADYNARWEAVETVRAQELAAMTEERARQIIFSLRLFAPVPPDPRNGMGLVEQQAVFHGRKS
Ga0315290_1136691223300031834SedimentVSYPSAMSFDALELKEFQAQYHTRWEAVETFKAQELAAMTEERAWQIIRSLRTFTEPWRDPANGMGLVEQQAVFHRRKPS
Ga0302322_10305692513300031902FenMSSDPLEMKEKARAEYYARWEAVEIVKAQELAAMTEERALQIIRSLRLFAPGPPNLLNGMGMVEQQAIFHRQKP
Ga0308176_1202916523300031996SoilSGAELNKGAPQTLFDYNKGMSSDPLELRDKARAEYHARWEAVESVKAQELAALTEERARQIIMSLRLFAPAPPNSSNGLGLVEQQKIFHRRKP
Ga0315278_1165835913300031997SedimentRHTLSMGSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEEHAREMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKK
Ga0315278_1200411823300031997SedimentLQKRQAAEYHARWEAVETVKAQELAVLTDEGALEIIRSLRLFAPVPPNPLNGMGLVEQQAILHRKRR
Ga0315292_1127970123300032143SedimentMDSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERAREMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKKR
Ga0315292_1168147313300032143SedimentMELREKLAAEYHARWEAVEIVKAHELAALTEERALEIIRSLRLFAPVPPNPLNGMGLVEQQAIFHRQGR
Ga0315295_1041362233300032156SedimentKLQADYLARWEAVETARAQDLAAMTEERARQIIYSLRLFAPVPPDPYNGMGLVEQQAIFHGHKS
Ga0315283_1057203923300032164SedimentVSYPSVMSSDSEPMELKEARAAYFARWEAVETFKAQELAAMTEERAWQIIRSLRPFTEPWRNPDNGAGLVEQQAIFHRRKPS
Ga0315283_1084707033300032164SedimentKLAAEYHARWEAVETVKAQELAALTEERAREMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKK
Ga0315271_1072798233300032256SedimentVQLRGDFRGEATHIMTMSFEPLTLQEKQAAEYHARWEAVETIKAQELAAMTNERALEIIRSLRLFAPAPPNPLNGMGLVEQQAV
Ga0315271_1117530523300032256SedimentMELREKLAAEYHARWEAVEIVKAQELAALTEERALEIIRSLRLFAPAPPNPLNGMGLVEQQAIFHRKGR
Ga0315270_1120679113300032275SedimentSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERARDMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKK
Ga0315287_1165398533300032397SedimentMSPDPLELRDAARAEYYARWEAVETIKAQELAAMTEERAWQIIRSLRPFADVPRDPSNGMGLVEQQAIFHGHRVP
Ga0315273_1060920033300032516SedimentMDSEPLKLQEKLTAEYHARWEAVETVKAQELAALTEERAREMIHALRLFAPAPSNPMNGMGLVEQQAIFHRKK
Ga0315273_1149122413300032516SedimentLELQKKFQADYRARWEAVETARAQDLAAMTEERARQIIYSLRLFAPVPPDPYNGMGLVEQQAIFHGHKS
Ga0315273_1192828213300032516SedimentMGSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEEHAREMIHALRLFAPAPSNPMNGMGLVEQQAIFH
Ga0335085_1170265123300032770SoilSEPRELNEARAAYFARWEAVEIFKAHELAAMTEERARQIIQMLSAFSDVEPDPFNGMGLVEQQAIFHKRKPS
Ga0335085_1177134513300032770SoilGGIWPIIPGMSSDPLELNEARAANHERWEAVEIFKAHELAAMTEERARQIIQSLSCFTDIPPDPLNGMGLVEQQAIFHKGRPS
Ga0335082_1099646033300032782SoilARAEYHARWEAVETFKAHELAAMTEERGKEIIHSLRLFAPAPPKLFNGEGLVEQQAIFHRHRS
Ga0335079_1029979233300032783SoilMDSEPLRVQEKLAAQYHARWEAVETVKAQELAALTEERAREMIHALRPFVPIPPKPRNGMGLVEQQAIFHTTRWP
Ga0335079_1107619823300032783SoilLVLRLKALLTVGGIWFIIPGMSSDPLELNEARAAYHERWEAVEIFKAHELAAMTEERARQIIQSLSCFTDIPPDPFNGMGLVEQQAIFHKKRRPS
Ga0335080_1122488313300032828SoilDGEHLVLRLKALLTGGGIWPIIPGMSSDPQELNEARAAYHERWEAVEIFKAHELAAMTEERARQIIQSLSCFTDIPPDPFNGMGLVEQQAIFHKKRRPS
Ga0335070_1116337013300032829SoilMDSEPLKLQEKLAAEYHARWEAVETVKAQELAALTEERAREMFRALRLFAPAPPNPMNGMGLVEQQAIFHRLKRCP
Ga0335069_1053007113300032893SoilARREAVEAVKARELAGMTEEIAWKIICSLRPFTEIPQDPSNGMGWVEQQSIFHRRRTS
Ga0335071_1006139763300032897SoilMSSDSSPTELKDAARAEYHARWEAVETFKAHELAAMTEERGKEIIHSLRLFAPAPPKLFNGEGLVEQQAIFHRHRS
Ga0335071_1029098433300032897SoilMGSEPMELNEARAAYFARWEAVEIFKAHELAAMTEERARQIIQMLSAFSDVEPDPFNGMGLVEQQAIFHKRKPS
Ga0335071_1212694213300032897SoilMTSDAESAELNEKARAEYYARREAVEAVKARELAGMTEEIAWKIICSLRPFTEIPQDPSNGMGWVEQQSIFHRRRTS
Ga0335084_1113528233300033004SoilMNSDSGPMELKDAARAEYHARWEAVETFKAHELAAMTEERGKEIIHSLRLFAPAPPKLFNGEGLVEQQAIFHRHRS
Ga0335077_1097162823300033158SoilLVLRLKALLTGGGIWPIIPGMSSDPQELNEARAAYHERWEAVEIFKAHELAAMTEERARQIIQSLSCFTDIPPDPFNGMGLVEQQAIFHKKRRPS
Ga0334722_1083344423300033233SedimentMSSDALELRDAWREQYRTTSEALEIVRAQELAAMTEERAREIIRSLRPFAPIPPDPLNGMGLVRQQAIFHGLKFE
Ga0316625_10058105913300033418SoilMTMSPEPPTLHEKQAAEYHARWEAVEVVKAQELAAMTNERALEIIRSLRLFAPAPPNPLNGMGLVEQQAVFHRKRR
Ga0326726_1168457213300033433Peat SoilMSGDLDAESSHTGGMSSEPLTLQEKQAVEYHARWEAVETVKAQELAAMTDERALEIIRSLRLFAPVPPNPMNGLGLVEQQAIFHRKRR
Ga0316620_1085573923300033480SoilLDRPANSQADYCARWEAVATVRARELAALTEEKALRIICSLRLFAPIPPDPRNGMGLVEQQAIFHGHKL
Ga0316627_10174374113300033482SoilMSPDPLELRDTARAEYHARWEAVETFKAQELAAMTEERAWQIIRSLRPFADMPRDPFNGMGLVEQQAIFHRHRVP
Ga0316624_1079407223300033486SoilMSSEPLKLREKQAAEYHARWEAVETVKAQELAAMTEERALEIIRSLRLFAPVPPNPMNGLGLVEQQAIFHRKRQ
Ga0299912_1053216133300033489SoilMSSDSFETKESLKALYGARWDAVEAVRAQELAAMTEEQAREIVFSLRLFAPVPPDPDNGMGLVEQQAIFHGRKL
Ga0316628_10075789033300033513SoilMDSEPLELREKLAAEYHARWEAVETFKAQELAALTEERAREIIRTLRLFAPVPPNPMNGMGLVEQQAIFHRKKA
Ga0316628_10125754813300033513SoilMSTEPSELKEKFQAEYHARWEAVEIVRAQELAAMTEERAREIIGLLRPFGPIPPDPLNGMGLVRQQAIFHRLELE
Ga0316628_10168910923300033513SoilVVNMGDFQYSVAMCSSSLDRPANSQADYCARWEAVATVRARELAALTEEKALRIICSLRLFAPIPPDPRNGMGLVEQQAIFHGHKL
Ga0316616_10217989923300033521SoilMTMSPEPLTLHEKQAAEYHARWEAVEVVKAQELAAMTNERALEIIRSLRLFAPAPPNPLNGMGLVEQQAVFHRKRR
Ga0316616_10357663923300033521SoilVSPDPLESKEAWRERYRATCEALEIVRAQELAAMTEERARQIIQSLRPFAPLPPDPCNGMGLVRQQAIFHGLKLE
Ga0316616_10358294923300033521SoilLSGDFWAERRHIRRMSSEPLNLQQKQAAEYHARWEAVETVKAQELAAMTDERALEIIRSLRLFAPVPPNPVNGLGLVEQQAI
Ga0316617_10228417313300033557SoilMFSDFRVASRHILSMSSEPLTLQEKQAAAYHARWEAVETVKAHELAAMTEERALEIIRSLRLFAPVPPNPLNG
Ga0334844_114609_281_5083300033743SoilMDSEPLKVQEKLAAQYHARWEAVETVKAQELAALTEERAREMIHALRPFVPIPPKPLNGMGLVEQQAIFHKRRWP
Ga0370480_0189684_58_2853300034169Untreated Peat SoilMISDPLELREKFQAEYHARWEAVETFKAHELAAMTEERARQIIDSLSAFTDVPPDPFNGLGLVEQQAIFHGLKRP


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