NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F037370

Metagenome / Metatranscriptome Family F037370

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F037370
Family Type Metagenome / Metatranscriptome
Number of Sequences 168
Average Sequence Length 36 residues
Representative Sequence MWEVLRWFAVFVIALLLIVAGLFWLMGRPLPIPQF
Number of Associated Samples 142
Number of Associated Scaffolds 168

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 129
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.691 % of family members)
Environment Ontology (ENVO) Unclassified
(23.810 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(34.524 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52
1P3_DRAFT_00639030
2P3_DRAFT_00081850
3Perma_A_C_04258830
4P3_CLC_02884540
5A5_c1_01208550
6ICCgaii200_08477472
7ICChiseqgaiiDRAFT_08030192
8AL16A1W_101064982
9JGI10216J12902_1096883884
10A21PFW6_13358932
11A2065W1_101696644
12C687J26616_101201022
13C687J26616_101255082
14C687J26631_100611122
15soilL1_100170514
16Ga0055440_100202842
17Ga0063356_1016128833
18Ga0070706_1000286021
19Ga0070730_100273742
20Ga0066661_101107623
21Ga0066707_102333822
22Ga0066707_107726842
23Ga0066699_100058886
24Ga0066708_102790711
25Ga0068854_1003437823
26Ga0068859_1027140042
27Ga0074470_1001022123
28Ga0075288_10022804
29Ga0075293_10196572
30Ga0075284_10003324
31Ga0081539_100393394
32Ga0066696_109669771
33Ga0070716_1008932291
34Ga0066658_100705802
35Ga0066660_101984062
36Ga0075428_1004483602
37Ga0075433_113253292
38Ga0075425_1000139548
39Ga0075425_1008821172
40Ga0079215_110600872
41Ga0075436_1004122762
42Ga0097620_1001414943
43Ga0079218_134092832
44Ga0102953_10216393
45Ga0102953_11234641
46Ga0104325_1160512
47Ga0066710_1038505582
48Ga0105095_102853902
49Ga0066709_1016292342
50Ga0114129_131721792
51Ga0118657_127905951
52Ga0126308_109345252
53Ga0136847_130915621
54Ga0138514_1000138122
55Ga0138514_1000152982
56Ga0137458_10515502
57Ga0120148_10001102
58Ga0137364_106927532
59Ga0137383_113018981
60Ga0137374_106031071
61Ga0137381_103663361
62Ga0137375_103071523
63Ga0157216_104032522
64Ga0157305_100841571
65Ga0153915_100264565
66Ga0153915_108480492
67Ga0162651_1000969542
68Ga0120181_11309542
69Ga0120158_102329851
70Ga0120125_11018882
71Ga0075320_10543081
72Ga0075316_11595782
73Ga0167632_10021244
74Ga0167629_11966002
75Ga0132258_110674644
76Ga0132258_137251832
77Ga0132256_1033508621
78Ga0132255_1003749363
79Ga0184610_10525482
80Ga0184605_103604442
81Ga0184634_105381762
82Ga0184638_10170104
83Ga0184638_11480152
84Ga0184626_102549942
85Ga0184623_100148512
86Ga0184623_101472872
87Ga0184623_101738233
88Ga0184637_102212402
89Ga0184617_10196523
90Ga0184618_100052116
91Ga0184618_104016161
92Ga0184640_105274901
93Ga0184632_103935501
94Ga0184609_100278704
95Ga0184633_100063205
96Ga0184612_101757312
97Ga0184612_104522502
98Ga0184625_102593332
99Ga0184629_104496432
100Ga0190272_118529432
101Ga0066667_106406961
102Ga0066662_114457222
103Ga0190270_132169381
104Ga0184643_12127212
105Ga0193741_11062201
106Ga0193751_100029842
107Ga0210382_100302093
108Ga0193719_100830862
109Ga0193719_101248252
110Ga0193695_10397901
111Ga0224500_100465812
112Ga0222623_103741721
113Ga0209618_10318703
114Ga0209109_100296153
115Ga0209109_102403662
116Ga0209108_101482542
117Ga0209431_101898123
118Ga0209431_102197322
119Ga0209431_102903052
120Ga0210132_10257601
121Ga0210076_10152682
122Ga0207684_100140581
123Ga0207684_100515615
124Ga0207646_1000191310
125Ga0207646_101368742
126Ga0207646_104566462
127Ga0207646_104766132
128Ga0207644_118310002
129Ga0208415_10111612
130Ga0208529_10252112
131Ga0207708_103670162
132Ga0209919_10096622
133Ga0209919_12306621
134Ga0209159_10938802
135Ga0256867_102775612
136Ga0209805_13438512
137Ga0209577_100397873
138Ga0209999_10394103
139Ga0214468_10502603
140Ga0256866_10029783
141Ga0209166_100191685
142Ga0268264_111087182
143Ga0307303_100042852
144Ga0307320_104566921
145Ga0307282_101706102
146Ga0307282_101785462
147Ga0307504_100100922
148Ga0307281_103655342
149Ga0307281_103742431
150Ga0307296_100553353
151Ga0307312_100189373
152Ga0299907_100395895
153Ga0247826_104700871
154Ga0299914_101724324
155Ga0299914_104664302
156Ga0299913_105777562
157Ga0315556_10731252
158Ga0310813_101126732
159Ga0310813_111837372
160Ga0307468_1009602862
161Ga0214473_100601785
162Ga0315540_100220482
163Ga0315281_1000423722
164Ga0214472_1000430618
165Ga0326726_118790362
166Ga0326731_10753651
167Ga0364930_0065469_777_890
168Ga0370484_0014174_938_1048
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 39.68%    β-sheet: 0.00%    Coil/Unstructured: 60.32%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035MWEVLRWFAVFVIALLLIVAGLFWLMGRPLPIPQFExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Sediment
Freshwater Sediment
Freshwater Wetlands
Salt Marsh Sediment
Natural And Restored Wetlands
Mangrove Sediment
Sediment
Soil
Sediment (Intertidal)
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Serpentine Soil
Glacier Forefield Soil
Surface Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Permafrost
Soil
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Soil
Untreated Peat Soil
Natural And Restored Wetlands
Rice Paddy Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Peat Soil
Sediment
Soil
Arabidopsis Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
12.5%13.7%3.0%4.2%3.0%8.3%3.6%3.0%5.4%3.6%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P3_DRAFT_006390302088090008SoilMESETMWDVLRWFAVFVIAILLIVAGLFWIMGRQLPFPNF
P3_DRAFT_000818502088090008SoilMWDVLRWFAVFAIAILVIVAGLFLIMGRQLPIPNF
Perma_A_C_042588302124908032SoilMWDVLRWFAVFVAAILVMVAGLYLVLGKPLPFPHLF
P3_CLC_028845402124908041SoilMESETMWDVLRWFAVFVIAILLIVAGLFWIMGRQLPIPNF
A5_c1_012085502124908044SoilMWDVLRWFAVFVAAIMVMVAGLYLVLGRPLPIPHLF
ICCgaii200_084774722228664021SoilMWDVVRWFAVFVIAVFVIVIGLFWILDKPFPWPQLF
ICChiseqgaiiDRAFT_080301923300000033SoilMEVLRWFAVFVIAILLMVAGLFWLMGRPLPIPQF*
AL16A1W_1010649823300000887PermafrostMWDVLRWFAVFVIAVLVLVAGVYLVLGKPLPIPSLF*
JGI10216J12902_10968838843300000956SoilMAWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPSF*
A21PFW6_133589323300001333PermafrostFYALIESAEMWDVLRWFAVFVIAVLVLVAGVYLVLGKPLPIPSLF*
A2065W1_1016966443300001537PermafrostMEVLRWLAFFVLAILLIVAGLFWLMGRPLPFPSF*
C687J26616_1012010223300002120SoilMWEVLKWFGLFVLAMLTIVAGLFWLMGRPITIPNLF*
C687J26616_1012550823300002120SoilMWDVLRWFSVFVIAVLVMVAGLYWILGKPLPIPSLF*
C687J26631_1006111223300002124SoilMWDVLRWFAVFIAAVLVLVFGLYLILGKPLPLPQIF*
soilL1_1001705143300003267Sugarcane Root And Bulk SoilVEEGTVWEVLKWFAVFVIALLLIVAGLFWLMGRPLPFPQF*
Ga0055440_1002028423300004020Natural And Restored WetlandsMESETMWDVVRWFAVFVIAILVIVAGLFWIMGRSLPIPNF*
Ga0063356_10161288333300004463Arabidopsis Thaliana RhizosphereMEPPMWDVLRWFAVFVIAVLLIVAGIFWLFGRDLPIPQF*
Ga0070706_10002860213300005467Corn, Switchgrass And Miscanthus RhizosphereLGSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRALPIPQF*
Ga0070730_1002737423300005537Surface SoilMWEVLRWMIVFVLAVLLIVAAIYLVLGQPLPIPQF*
Ga0066661_1011076233300005554SoilMWEVLRWMIVFVLALLLIVAAIYLVTGRALPIPQF*
Ga0066707_1023338223300005556SoilMWDVLRWFSVFVIAILLIVAGLFWIMGRPLPIPQF*
Ga0066707_1077268423300005556SoilMWEVLRWMIVFVLALLLIVTAIYLVTGRPLPIPQF*
Ga0066699_1000588863300005561SoilMWEVLRWMIVFVLALLLIVAAIYLVTGRTLPIPQF*
Ga0066708_1027907113300005576SoilMWEVLRWMIVFVLALLLIVAAIYLVTGRPLPVPQF*
Ga0068854_10034378233300005578Corn RhizosphereMWDVVRWFAVFVIAIIVIVAGLYWILDKPLPIPQF*
Ga0068859_10271400423300005617Switchgrass RhizosphereVWEVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0074470_10010221233300005836Sediment (Intertidal)MWDVVRWFAVFVIAILVIVAGLFWIMGRSLPIPNF*
Ga0075288_100228043300005874Rice Paddy SoilMWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPNF*
Ga0075293_101965723300005875Rice Paddy SoilMWDVLRWFAVFVAAILVMVAGLYLLLGKPLPIPHLF*
Ga0075284_100033243300005885Rice Paddy SoilMWEVLRWMIVFVLALLLIVAGIYLVLGEPLPIPQF*
Ga0081539_1003933943300005985Tabebuia Heterophylla RhizosphereMWEVLKWFAVFVIALLLIVAGLFWLMGRELPIPQF*
Ga0066696_1096697713300006032SoilMWEVLRWMIVFVLALLLIVAAIYLVTGRPLPIPQF*
Ga0070716_10089322913300006173Corn, Switchgrass And Miscanthus RhizosphereMWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPSF*
Ga0066658_1007058023300006794SoilMWEVLRWMIVFVLALLLIVVAIYLATGRPLPIPSF*
Ga0066660_1019840623300006800SoilMPYLGAEPMWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPQF*
Ga0075428_10044836023300006844Populus RhizosphereMWEVLKWMAVFVIALLLIVAGLFWLMGRDLPIPQF*
Ga0075433_1132532923300006852Populus RhizosphereMWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF*
Ga0075425_10001395483300006854Populus RhizosphereVWDVIRWFAVFVIAVFVLIAGLYLILGKPLPIPHLF*
Ga0075425_10088211723300006854Populus RhizosphereMWEVLRWMIVFVLALLLIVAAIYLVTGRSLPIPSF*
Ga0079215_1106008723300006894Agricultural SoilMWEVLRWFAVFVLALLLMVAGLFWLMGRPLPIPDF*
Ga0075436_10041227623300006914Populus RhizosphereMWEVLRWMIVFVLALLLIVAAIYIVDGRSLPIPSF*
Ga0097620_10014149433300006931Switchgrass RhizosphereMWDVLRWFAVFVIAVLVLIAGVYLVLGKPLPIPSLF*
Ga0079218_1340928323300007004Agricultural SoilMWEVLKWMIVFVLSLLLIVAGLFWLMGRPLPIPEF*
Ga0102953_102163933300007775SoilMWEVLRWFAVFVLALLLIVAGLFWLMGRPLPIPNF*
Ga0102953_112346413300007775SoilMWEVLRWMIVFIAALLLIVAGIYWVLGRPLPIPSF*
Ga0104325_11605123300007822SoilMWDVLRWFAVFVTAILVIVAGLYLVLGRPLPFPHLF*
Ga0066710_10385055823300009012Grasslands SoilMWDVLRWFAVFVIAVLVLVAGIYLVLGKPLPIPSLF
Ga0105095_1028539023300009053Freshwater SedimentMWEVLRWFAVFVLALLLMVAGLFWLMGRPLPIPEF*
Ga0066709_10162923423300009137Grasslands SoilMWEVVRWMIVFVLALLLIVAAIYLVTGQPLPIPQF*
Ga0114129_1317217923300009147Populus RhizosphereVWEVLKWFAVFVIALLLIVAGLFWLMGRDLPIPTF*
Ga0118657_1279059513300009506Mangrove SedimentVWEVLKWFLVFVIALLLLVAGLFWLMGRPLPIPNF*
Ga0126308_1093452523300010040Serpentine SoilMGWEVLRWFAMFVIALLLIVAGLFVLMGQPLPIPQF*
Ga0136847_1309156213300010391Freshwater SedimentMWDVLRWFAVFAAAVLVMVAGLYLILGRPLPIPHLF*
Ga0138514_10001381223300011003SoilMWDVLRWFAVFVIAVFVIVIGLFWILDKPFPWPQLF*
Ga0138514_10001529823300011003SoilMWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPQF*
Ga0137458_105155023300011436SoilMWEVLKWMAVFVAAILVMVAGLYIILGKPLPIPQLF*
Ga0120148_100011023300011999PermafrostMWDVLRWFFVFVLAVLILVAGLYWILGKSLPIPHLF*
Ga0137364_1069275323300012198Vadose Zone SoilMWEVLRWMIVFVFALLLIVAAIYLVTGRPLPIPQF*
Ga0137383_1130189813300012199Vadose Zone SoilMWEVVRWMIVFVLALLLIVAAIYLVTGQPLSIPQF*
Ga0137374_1060310713300012204Vadose Zone SoilMAWEVLRWFLVFVLALLLIVAGLFWLMGRPLPFPNF*
Ga0137381_1036633613300012207Vadose Zone SoilMWEVVRWMIVFVLALLLIVAAIYLVTGRPLPIPQF*
Ga0137375_1030715233300012360Vadose Zone SoilMGAEAMWDVLRWFAVFVVAVLLIVAGLFLLFGKPLPIPSLF*
Ga0157216_1040325223300012668Glacier Forefield SoilMWEVLRWFSVFVIAVLVMVAGLYWILGKPLPIPSLF*
Ga0157305_1008415713300012891SoilMWEVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0153915_1002645653300012931Freshwater WetlandsMWDVLRWFAVFVIAILLLVAGLFWIMGRPLPIPNF*
Ga0153915_1084804923300012931Freshwater WetlandsMWDVLRWFAVFVVAILLLVAGLFWIMGRPLPIPNF*
Ga0162651_10009695423300012938SoilMWEVLKWFGVFMLALLLIVAGLFWLMGRPLPIPQF*
Ga0120181_113095423300013766PermafrostMWDVLRWFFVFVLAVLILVAGRYGILGKPLPIPHLF*
Ga0120158_1023298513300013772PermafrostMWDVLRWFAVFVLAVLVLVAGLYWVLGKPLPIPHSSDSLPGH
Ga0120125_110188823300014056PermafrostMWDVLRWFSVFVIAILLIVAGLFWIMGRPLPIPSF*
Ga0075320_105430813300014255Natural And Restored WetlandsVWEVLKWFAVFVIALLLIVAGLFWLMGRPLPLIPSF*
Ga0075316_115957823300014314Natural And Restored WetlandsMWEVLRWFFVFVLALLLMVAGLFWLMGRPLPIPNF*
Ga0167632_100212443300015085Glacier Forefield SoilMWDVLRWFAVFVAAILVMVAGLYLILGKPLPVPHLF*
Ga0167629_119660023300015209Glacier Forefield SoilMWDVLRWFAVFVLAVLALVAGLYWILGKPLPIPNLF*
Ga0132258_1106746443300015371Arabidopsis RhizosphereMWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0132258_1372518323300015371Arabidopsis RhizosphereMWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPSF*
Ga0132256_10335086213300015372Arabidopsis RhizosphereMWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPTF*
Ga0132255_10037493633300015374Arabidopsis RhizosphereVWNVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0184610_105254823300017997Groundwater SedimentMWDVLRWFAVFVAAVLVIVLGLFWLLDKPFPWPQLF
Ga0184605_1036044423300018027Groundwater SedimentMWDVLRWFAVFVIAIIVIVVGLYWILDKPLPIPQF
Ga0184634_1053817623300018031Groundwater SedimentMWDVLRWFAVFVVAVLVLIWGLYLILGQPFPWPELPF
Ga0184638_101701043300018052Groundwater SedimentMAWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPSF
Ga0184638_114801523300018052Groundwater SedimentMWDVLRWFAVFVVAILVIVFGLYLILGKPLPIPPLPWF
Ga0184626_1025499423300018053Groundwater SedimentMWDVLRWFAVFVVAVLVIVVGLFWIFDKPFPWPQLF
Ga0184623_1001485123300018056Groundwater SedimentMTWEVLRWMALFVIALLLIVAGLFWLMGRPLPIPNF
Ga0184623_1014728723300018056Groundwater SedimentMWDVLRWFAVFVVAVLVIVAGLFLLFGKPLPIPSLF
Ga0184623_1017382333300018056Groundwater SedimentMWDVLRWFAVFVAAVLVIVAGLFLLFGKPLPIPSLF
Ga0184637_1022124023300018063Groundwater SedimentMWEVLKWFGMFVVAMLVIVFGLFWLMGRPIPIPNIF
Ga0184617_101965233300018066Groundwater SedimentMWDVVRWFAVFVIAIIVIVVGLYWILDKPLPIPQF
Ga0184618_1000521163300018071Groundwater SedimentMWDVLRWFAVFVIAILVIVAGLFWILGKPLPIPQLF
Ga0184618_1040161613300018071Groundwater SedimentMWDVLRWFAVFVIAVLVIVMGLFWLFNKPFPWPQLF
Ga0184640_1052749013300018074Groundwater SedimentMWDVLRWFAVFVAAVLVIVAGLYIILGRPLPIPQLF
Ga0184632_1039355013300018075Groundwater SedimentMWDVLRWFAVFVIAILVIVAGLFWIMGRPLPIPSF
Ga0184609_1002787043300018076Groundwater SedimentMWDVLRWFAVFVAAVLVIVLGLFWLFDRPFPWPQLF
Ga0184633_1000632053300018077Groundwater SedimentMWDVVRWFAVFVVAILVIVFGLYLILGKPFPWPQLPF
Ga0184612_1017573123300018078Groundwater SedimentMWDVLRWFAVFVAAILVIVLGLFWLLDKPFPWPQLF
Ga0184612_1045225023300018078Groundwater SedimentMWDVLRWFAVFVVAVLVLVVGLYWILGRPFPWPHLPF
Ga0184625_1025933323300018081Groundwater SedimentMWDVLRWFAVFVVAVLVIVIGLFWLFDKPFPWPQLF
Ga0184629_1044964323300018084Groundwater SedimentMWDVLRWFAVFVIAVLLIVAGLFLVFGKPLPIPQLF
Ga0190272_1185294323300018429SoilMAWEVLRWFAVFVIAMLLIVAGIFWLLDRPLPFPRF
Ga0066667_1064069613300018433Grasslands SoilSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRPLPIPQF
Ga0066662_1144572223300018468Grasslands SoilMWEVVRWMIVFVLALLLIVAAIYLVTGQPLPIPQF
Ga0190270_1321693813300018469SoilMWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF
Ga0184643_121272123300019255Groundwater SedimentMWDVLRWFAVFVIAVLLIVAGIYFVLGRPLPLPQLF
Ga0193741_110622013300019884SoilMWDVLRWFAVFVVAVLVIVAGLFLLFGKPLPIPSF
Ga0193751_1000298423300019888SoilMWDVLRWFSVFVIAILLIVAGLFWIMGRPLPIPQF
Ga0210382_1003020933300021080Groundwater SedimentMGWEVMRWFAMFIIAILLIVAGLFWLMGRPLPFPQF
Ga0193719_1008308623300021344SoilVWDVLKWMLVFVAAVSVLVAGLYLILGKPLPIPHLF
Ga0193719_1012482523300021344SoilMWDVLRWFAVFVIAVLVIVAGLFWIMGRPLPIPQLF
Ga0193695_103979013300021418SoilMWDVLRWFAVFVIAVLVIVAGIFWIFGKPLPIPQLF
Ga0224500_1004658123300022213SedimentMWDVLRWFAVFVIAVLVMVAGLYWILGKPLPIPNLF
Ga0222623_1037417213300022694Groundwater SedimentESAMTWEVLRWMALFVIALLLIVAGLFWLMGRPLPIPNF
Ga0209618_103187033300025001SoilMWDVLRWFSVFVIAVLVMVAGLYWILGKPLPIPSLF
Ga0209109_1002961533300025160SoilMWDVLRWFAVFIAAVLVLVFGLYLILGKPLPLPQIF
Ga0209109_1024036623300025160SoilMWDVLRWFAVFVAAILVIVAGLYIILGKPLPIPQLF
Ga0209108_1014825423300025165SoilMWDVLRWFAVFVAAILVIVAGLYIILGKPLPIPHLF
Ga0209431_1018981233300025313SoilMWEVLKWFGLFVLAMLTIVAGLFWLMGRPITIPNLF
Ga0209431_1021973223300025313SoilMWDVLRWFAVFVVAILVIVFGLYLILGQPLPIPGLPWF
Ga0209431_1029030523300025313SoilMWDVLRWFAVFVAAVLVIVFGLYLILGKPLPIPQIF
Ga0210132_102576013300025538Natural And Restored WetlandsMWDVVRWFAVFVIAILVIVAGLFWIMGRSLPIPNF
Ga0210076_101526823300025567Natural And Restored WetlandsVWEVLKWFAVFVIALLLIVAGLFWLMGRPLPFIPSF
Ga0207684_1001405813300025910Corn, Switchgrass And Miscanthus RhizosphereLGSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRPLPIPQF
Ga0207684_1005156153300025910Corn, Switchgrass And Miscanthus RhizosphereVLGSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRALPIPQF
Ga0207646_10001913103300025922Corn, Switchgrass And Miscanthus RhizosphereMWEVLRWMIVFILALLLIVAAIYLVAGRPLPIPQF
Ga0207646_1013687423300025922Corn, Switchgrass And Miscanthus RhizosphereMWDVLRWFAVFVIAVLVIVIGLFWLFNKPFPWPQLF
Ga0207646_1045664623300025922Corn, Switchgrass And Miscanthus RhizosphereMWDVLRWFAVFVIAILVIVAGLFWIFGKPLPIPQF
Ga0207646_1047661323300025922Corn, Switchgrass And Miscanthus RhizosphereMWDVFRWFAVFVIAMLVMVAGLYFVLGKPLPIPSLF
Ga0207644_1183100023300025931Switchgrass RhizosphereVWEVLKWMAVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0208415_101116123300025993Rice Paddy SoilMWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0208529_102521123300026008Rice Paddy SoilMWEVLRWMIVFVLALLLIVAGIYLVLGEPLPIPQF
Ga0207708_1036701623300026075Corn, Switchgrass And Miscanthus RhizosphereVWEVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF
Ga0209919_100966223300026196SoilMWEVLRWFAVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0209919_123066213300026196SoilMWEVLRWMIVFIAALLLIVAGIYWVLGRPLPIPSF
Ga0209159_109388023300026343SoilMWEVLRWMIVFVLALLLIVTAIYLVTGRPLPIPQF
Ga0256867_1027756123300026535SoilMWEVLRWFAVFVLALLLMVAGLFWLMGRPLPIPDF
Ga0209805_134385123300026542SoilMWEVLRWMIVFVLALLLIVAAIYLVTGRTLPIPQF
Ga0209577_1003978733300026552SoilMWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPQF
Ga0209999_103941033300027543Arabidopsis Thaliana RhizosphereWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF
Ga0214468_105026033300027647SoilGAQPMWEVLRWFAVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0256866_100297833300027650SoilMWEVLKWFAVFVIALLLMVAGLFWLMGRPLPIPEF
Ga0209166_1001916853300027857Surface SoilMWEVLRWMIVFVLAVLLIVAAIYLVLGQPLPIPQF
Ga0268264_1110871823300028381Switchgrass RhizosphereMWDVLRWFAVFVIAVLVLIAGVYLVLGKPLPIPSLF
Ga0307303_1000428523300028713SoilMWEVLKWFAVFVIALLLIVAGLFWLMGRPLPFLPQF
Ga0307320_1045669213300028771SoilAMTWEVLRWMALFVIALLLIVAGLFWLMGRPLPIPNF
Ga0307282_1017061023300028784SoilMWDVLRWFAVFVLAVLLLVAGLYWILGKPLPIPHLF
Ga0307282_1017854623300028784SoilMWDVLRWFAVFVVAVLVIVLGLFWLFDKPFPWPQLF
Ga0307504_1001009223300028792SoilMWDVLRWFAVFIAAILVLVAGLYLILGKPLPIPHLF
Ga0307281_1036553423300028803SoilSIGAEAMWDVLRWFLVFVVAVLVIVTGLFLLFGKPLPIPQLF
Ga0307281_1037424313300028803SoilMWDVLRWFLVFVVAVLVIVTGLFLLFGKPLPIPQLF
Ga0307296_1005533533300028819SoilMWDVLRWFAVFVAAILVIVLGLFWLMDKPFPWPQLF
Ga0307312_1001893733300028828SoilMWDVLRWFAVFVVAVLVIVLGLFWLLDKPFPWPQLF
Ga0299907_1003958953300030006SoilMWEVLKWMIVFVLSLLLIVAGLFWLMGRPLPIPEF
Ga0247826_1047008713300030336SoilNRSAMWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF
Ga0299914_1017243243300031228SoilMWEVLRWFAVFVFALLLIVAGLFWLMGRPLPIPQF
Ga0299914_1046643023300031228SoilMWEVLRWLGVFAIALLLIVAGLFWLMGRPLPIPQF
Ga0299913_1057775623300031229SoilMWEVLRWFAVFVIALLLIVAGLFWLMGRPLPIPQF
Ga0315556_107312523300031256Salt Marsh SedimentMWEVLRWMIVFVLAVLLIVMGIYLLLGRPLPIPQF
Ga0310813_1011267323300031716SoilMWDVLRWFAVFVIAVLLIVAGLFLVLGKPLPIPSLF
Ga0310813_1118373723300031716SoilMWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPQF
Ga0307468_10096028623300031740Hardwood Forest SoilMWEVLKWFGVFMLALLLIVAGLFWLMGRPLPIPQF
Ga0214473_1006017853300031949SoilMWDVLRWFLVFVVAVLVIVMGLFLLFGKPLPIPSLF
Ga0315540_1002204823300032061Salt Marsh SedimentMWEVLRWMIVFVLALLLIVAGIYLVLGQPLPIPQF
Ga0315281_10004237223300032163SedimentMWDVLRWFAVFVAAILVIVAILYLIMGRPLPIPNF
Ga0214472_10004306183300033407SoilMWDVLRWFAVFVIAVLVIVAGLFLVFGKPLPIPQLF
Ga0326726_1187903623300033433Peat SoilMWDVLRWFAVFAAAVLIMIAGLYWVLGKPLPIPHLF
Ga0326731_107536513300033502Peat SoilMWDVLRWFAVFAAAVLIIIAGLYWVLGKPLPIPHLF
Ga0364930_0065469_777_8903300033814SedimentMWDVLRWFAVFVAAIIMIVFGLYWVMGKPLPIPQLPF
Ga0370484_0014174_938_10483300034125Untreated Peat SoilMWDVLRWFAVFLAAIMVMVAGLYLVLGRPLPIPHLF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.