NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F037277

Metagenome / Metatranscriptome Family F037277

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F037277
Family Type Metagenome / Metatranscriptome
Number of Sequences 168
Average Sequence Length 41 residues
Representative Sequence VFIRREDAERFIEEVRGDDPELASYLRIEERELEAGGLN
Number of Associated Samples 134
Number of Associated Scaffolds 168

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.12 %
% of genes near scaffold ends (potentially truncated) 44.05 %
% of genes from short scaffolds (< 2000 bps) 82.14 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.976 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.476 % of family members)
Environment Ontology (ENVO) Unclassified
(32.143 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(36.905 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66
14PV_03591390
2ICChiseqgaiiFebDRAFT_108073401
3F24TB_117750521
4JGI10216J12902_1070666982
5JGI10216J12902_1091212651
6JGI10216J12902_1133351142
7JGI10216J12902_1228264133
8F14TB_1018996922
9Ga0062593_1011020192
10Ga0062590_1008470501
11Ga0062595_1005852662
12Ga0062592_1004052731
13Ga0062592_1009970963
14Ga0062591_1003167754
15Ga0062591_1019324082
16Ga0062594_1027249631
17Ga0066674_103350612
18Ga0066809_101711352
19Ga0066810_101360522
20Ga0070683_1000402674
21Ga0066388_1001434351
22Ga0066388_1003717202
23Ga0066388_1058670882
24Ga0068869_1001629493
25Ga0068868_1003454734
26Ga0070675_1014569431
27Ga0070671_1005808511
28Ga0070674_1002412182
29Ga0070665_1006259621
30Ga0066698_104799241
31Ga0066903_1035823041
32Ga0068870_106752982
33Ga0068870_107529181
34Ga0075422_104604341
35Ga0068871_1007841102
36Ga0074051_117789661
37Ga0074047_115681361
38Ga0074054_117119732
39Ga0074049_124360452
40Ga0074048_129776082
41Ga0075428_1002275644
42Ga0075421_1004025821
43Ga0075418_114836322
44Ga0066709_1007436163
45Ga0105259_11275421
46Ga0105252_106008022
47Ga0105056_10701612
48Ga0105088_10712952
49Ga0105082_10946872
50Ga0105078_10196303
51Ga0105074_11130621
52Ga0126309_1000245210
53Ga0105239_133163082
54Ga0136847_134975832
55Ga0126383_105083401
56Ga0126383_105323032
57Ga0105246_104868093
58Ga0137428_11906242
59Ga0137433_10639661
60Ga0137433_11513811
61Ga0120192_100105332
62Ga0136631_103419161
63Ga0137371_100122723
64Ga0137371_108902911
65Ga0137371_111048532
66Ga0136630_10047965
67Ga0136614_101944713
68Ga0157282_102192322
69Ga0164300_106142422
70Ga0164299_103276682
71Ga0164299_106357831
72Ga0164302_113350742
73Ga0126369_117152522
74Ga0164308_108973272
75Ga0157307_11650772
76Ga0157378_117750831
77Ga0157375_129582371
78Ga0075326_10965722
79Ga0157380_123353071
80Ga0173483_100400842
81Ga0173483_107551961
82Ga0173478_108596322
83Ga0180093_10040972
84Ga0180093_10330401
85Ga0132258_101395901
86Ga0132258_102207148
87Ga0132258_102955933
88Ga0132258_104495645
89Ga0132258_136912404
90Ga0132256_1004212852
91Ga0132256_1013568552
92Ga0132256_1017222172
93Ga0132257_1005943082
94Ga0132255_1000330968
95Ga0132255_1023777871
96Ga0132255_1032294661
97Ga0183260_100772803
98Ga0183260_106637032
99Ga0136617_103604902
100Ga0136617_114973142
101Ga0190266_101295032
102Ga0184610_12472172
103Ga0184634_101878482
104Ga0184635_100100395
105Ga0184624_101035832
106Ga0184609_101338642
107Ga0190270_100931072
108Ga0190270_113239152
109Ga0190274_117502202
110Ga0190271_102789271
111Ga0190271_106037523
112Ga0190271_107651522
113Ga0173481_101161891
114Ga0187893_103647582
115Ga0193729_12123661
116Ga0193697_11216471
117Ga0224500_100870722
118Ga0222622_110407761
119Ga0209431_100807711
120Ga0207697_101385983
121Ga0209341_111867531
122Ga0207688_105374621
123Ga0207650_103413003
124Ga0207659_111824381
125Ga0207659_112387821
126Ga0207704_113793072
127Ga0207689_104278683
128Ga0207661_108829722
129Ga0207708_118391552
130Ga0207683_110625822
131Ga0256867_101504952
132Ga0208685_10947681
133Ga0208890_10048963
134Ga0208890_10516981
135Ga0209887_11071292
136Ga0233416_100021383
137Ga0209023_101307281
138Ga0233417_105809672
139Ga0247822_117818011
140Ga0247819_108094671
141Ga0307282_103509872
142Ga0307286_101033682
143Ga0299907_107866102
144Ga0307497_100307702
145Ga0307497_101345902
146Ga0299913_105573512
147Ga0318541_105388631
148Ga0315278_100632743
149Ga0310903_108381932
150Ga0310906_100346633
151Ga0310906_110369461
152Ga0310890_106010962
153Ga0315270_103900352
154Ga0315287_129236681
155Ga0315273_102591411
156Ga0315273_113778042
157Ga0247829_110858672
158Ga0364924_020638_1178_1297
159Ga0364926_010594_413_556
160Ga0364930_0239012_136_255
161Ga0364937_145801_390_509
162Ga0364938_017125_97_231
163Ga0364925_0243934_1_126
164Ga0364940_0012909_1524_1667
165Ga0364931_0034555_1364_1492
166Ga0364931_0313614_3_137
167Ga0364934_0113886_530_649
168Ga0364943_0025980_3_143
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.85%    β-sheet: 0.00%    Coil/Unstructured: 70.15%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035VFIRREDAERFIEEVRGDDPELASYLRIEERELEAGGLNSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
78.0%22.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater And Sediment
Sediment
Freshwater Sediment
Polar Desert Sand
Sediment
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Serpentine Soil
Terrestrial
Soil
Soil
Grasslands Soil
Soil
Soil
Soil
Natural And Restored Wetlands
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Soil
Groundwater Sand
Microbial Mat On Rocks
Sediment
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Switchgrass, Maize And Mischanthus Litter
4.2%4.2%4.8%3.0%15.5%5.4%4.8%4.2%4.2%3.6%6.5%5.4%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
4PV_035913902170459015Switchgrass, Maize And Mischanthus LitterVFIRCEDAERFIEEVGGDEPEIAAKLRIEERELEASGLN
ICChiseqgaiiFebDRAFT_1080734013300000363SoilPLGDAVETFIRLEDAERFIAEVRGDEPEMAEKLRIEERELEVGGLN*
F24TB_1177505213300000550SoilVLEVSIRREDAERVIEEIRSDDPELAKPLRIEEREL
JGI10216J12902_10706669823300000956SoilVDLEVFIRREDAERFIEEVRGDDPELAAKLRIEERELEAGGLN*
JGI10216J12902_10912126513300000956SoilTRREDADRFVEEIRGDEPELAASLRVGERELEASEPN*
JGI10216J12902_11333511423300000956SoilIRREDAERFIEEVRGDEPGLATNLRIEERELEAGSSN*
JGI10216J12902_12282641333300000956SoilDSIDVFVRREDAERFIQEVRGDDRELARPLRIEERELEAGRLN*
F14TB_10189969223300001431SoilMDRREDAERFIVDVRGDDPELASYLRIEERELEAG
Ga0062593_10110201923300004114SoilMPSRLTSPLGDAIDVRIRREDAERFIEEVRGDDPEMAAKLRIEERELEA
Ga0062590_10084705013300004157SoilELALFTRHEDAERFIEEVRGADPDVASKLGIEERELGAGPRD*
Ga0062595_10058526623300004479SoilVFIRREDAERFIEEVRRDDAELASSLRIEERELEAGQLN*
Ga0062592_10040527313300004480SoilVSQSLQRNTFVRREDAERFIEEVCTDEPDLAAKLRIEARELDTGGLS*
Ga0062592_10099709633300004480SoilSRLGDAVEVCIRREDAERFIEEVRGDDPEIAAKLRIEERELEAGGLH*
Ga0062591_10031677543300004643SoilVVEVFVRREDSERFIEEVLGDDPEATAKLRVEERELEAGGRNQRVRV*
Ga0062591_10193240823300004643SoilVFLRREDAERIVAEVRGDDPEVAASLLIEERELEAGGLS*
Ga0062594_10272496313300005093SoilDSLEVFVRREDAERFIEQVRGDDPEVAEKLRIEERELKAA*
Ga0066674_1033506123300005166SoilVFVRCEDAERFIEEIRGDEPELAKPFRIEERELEAGGRN*
Ga0066809_1017113523300005168SoilVFIRRDDAERFIEEVRGDDPKLASDLRIEERELEAEGLN*
Ga0066810_1013605223300005169SoilSARCAIETFVRREDAERFIEEVRGDDPGIAAHLRIEERELEGVGGLN*
Ga0070683_10004026743300005329Corn RhizosphereVFVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA*
Ga0066388_10014343513300005332Tropical Forest SoilVYVRREDAEPFIEQVRGDDPELAKELRIEERELGAGELK*
Ga0066388_10037172023300005332Tropical Forest SoilMKPGHEDAERFIEEVRGDEAELAKHLRIEERELEVGGQN*
Ga0066388_10586708823300005332Tropical Forest SoilMKTAVAPRREYAERFIEEVRGDEPELAKALRIEEREFEAGGRN*
Ga0068869_10016294933300005334Miscanthus RhizosphereVFVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDS
Ga0068868_10034547343300005338Miscanthus RhizosphereVSIRPEDAERFIEEVRGDDPEVAASLRIEERELDAGGLN*
Ga0070675_10145694313300005354Miscanthus RhizosphereGGSVETFVRREDAERFIEEVRGDEPELVPKLRIKERELALGGLS*
Ga0070671_10058085113300005355Switchgrass RhizosphereVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA*
Ga0070674_10024121823300005356Miscanthus RhizosphereVSIRREDAERFIEEVRGDDPEVAASLRIEERELDADGLN*
Ga0070665_10062596213300005548Switchgrass RhizosphereREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA*
Ga0066698_1047992413300005558SoilMERTTLRPEVYVRREDAERFIGEIRGDDPELAGPLRFEERELEAGGVS*
Ga0066903_10358230413300005764Tropical Forest SoilVYVRREDAERFIEQVRGDDPELAKELRIEERELGAGELK
Ga0068870_1067529823300005840Miscanthus RhizosphereDFPLGVELEVFVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA*
Ga0068870_1075291813300005840Miscanthus RhizosphereETFVRREDAERFIEEVRGDDPDLAAKLRIELRELEAGGLN*
Ga0075422_1046043413300006196Populus RhizosphereMLEVCIRRKDAERFIEEGEGDDPEIAAKLRIEERELEAGGLH*
Ga0068871_10078411023300006358Miscanthus RhizosphereREDAERIADVRGDDPELAAKLRIEERELEAGGLN*
Ga0074051_1177896613300006572SoilMTSSRAKERFVEEVEPTIPELASYLRIEQRELEAGVLN*
Ga0074047_1156813613300006576SoilMTSSREKERFVEEVEPTIPELASYLRIEERELEAGVLN*
Ga0074054_1171197323300006579SoilMTSSRAKERFVEEVEPTIPELASYLRIEERELEAGVLN*
Ga0074049_1243604523300006580SoilVFIRREDAERFIEEVRGDDPELASYLRIEERELEAGGRN*
Ga0074048_1297760823300006581SoilVFIRREDAERFIEEVRGDDPELASYLRIEERELEAGGLN*
Ga0075428_10022756443300006844Populus RhizospherePLEVFIRREDAERLVKEVRGDEPEVAAKLRIEERELEAGGVN*
Ga0075421_10040258213300006845Populus RhizosphereVFIRREDAERLVKEVRGDEPEVAAKLRIEERELEAGGVN*
Ga0075418_1148363223300009100Populus RhizosphereVFVHRDDAERFIAEVCGDEPEVAAKLRIEERELEGDHPN*
Ga0066709_10074361633300009137Grasslands SoilMCLCREDAERFVEEIRRDDPELAEPLRIEERELKTGGRN*
Ga0105259_112754213300009597SoilMNRIQFVETFIRREDAGRFIEEVRGDDPEMAANLRIDERELEA
Ga0105252_1060080223300009678SoilMNRIQFVETFVRREDAERFVEEVRGDDPELASYLRIEERELEAGGRN*
Ga0105056_107016123300009801Groundwater SandMNRIHFVETFVRREEAERFIEEVRGDDPELASYLRIEERGV*
Ga0105088_107129523300009810Groundwater SandVRREDAERFVEEVRTDDPELASYLRIQERELEAGGLN*
Ga0105082_109468723300009814Groundwater SandMNRIHFVETFVRREEAERFIEEVRGDEPELAAKLRIEERELEAGGPN*
Ga0105078_101963033300009823Groundwater SandREHAERFIQEIRHDEPELAGPLRIEERVLEAGGPN*
Ga0105074_111306213300010029Groundwater SandVFIRREDAERFIEEVRGDDPELAGSLRIEERELEA
Ga0126309_10002452103300010039Serpentine SoilLRAAGGEDAERFIEEVRGDDPEVAAKVRIEERELEAGALN*
Ga0105239_1331630823300010375Corn RhizosphereLGVELEVFVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA*
Ga0136847_1349758323300010391Freshwater SedimentMNRIQFVETLIRREDAGRFIEEVQGDDPELARYLRIEERELEAGGLN*
Ga0126383_1050834013300010398Tropical Forest SoilVELEVYVSREDAARFIEEVRGDEPELANDLRIEERE
Ga0126383_1053230323300010398Tropical Forest SoilVYVRREDAERFIEQVRGDDPELAKELRIEERELGAGGLK*
Ga0105246_1048680933300011119Miscanthus RhizosphereVFIRREDAERIADVRGDDPELAAKLRIEERELEAGGLN*
Ga0137428_119062423300011432SoilMNRIQFVETFIRREDAGRFVEEVRGDDPELAASLRVEERELE
Ga0137433_106396613300011440SoilMNRIQFVETFIRREDAGRFIEEVRGDDPEMAANLRIEERELEAGGRN*
Ga0137433_115138113300011440SoilGVELEGFIRRKDTERFVEEVRGDEPEIAAKLRIEEGELEAGGLD*
Ga0120192_1001053323300012021TerrestrialVFVRREDAERFVVEIRGDEPELARHLRIEEREPEAGG*
Ga0136631_1034191613300012043Polar Desert SandLHAFAPNFRTRREDAERFIEEVRGDDPDLASYLRIEERDLEAGGMN*
Ga0137371_1001227233300012356Vadose Zone SoilVFVRREDAQRFIEEIRGDEPELAKPFRIEERELEAGGRN*
Ga0137371_1089029113300012356Vadose Zone SoilFVRREDAERFIEEVRSDDPELAKPLRIEERELETGGAN*
Ga0137371_1110485323300012356Vadose Zone SoilLDDSLDVFVRREDAERFIEDIRGDDLELAKPLRIEEREFEDR*
Ga0136630_100479653300012529Polar Desert SandLHAFAPNFRTRREDAERFIEEVRGDDPDLASYLRIEKRDLEAGGMN*
Ga0136614_1019447133300012684Polar Desert SandFIHREDAERFVEEVRGDDPELASYLRIEERGLEAGGPN*
Ga0157282_1021923223300012904SoilLSVSFIRREEAERFIEEVRGDDPEMAAKLRIEKRELEAGGLN*
Ga0164300_1061424223300012951SoilVELEVLVRREDAEGFVEEVRGDDPELAPKLRIEEQELEAGGRN*
Ga0164299_1032766823300012958SoilVFVPREYAERFIADVRGDDPEVAAKLRIEERELEAGGLN*
Ga0164299_1063578313300012958SoilREDAERFIAEVRSDAPKLAEKLRVEERELEAGGLN*
Ga0164302_1133507423300012961SoilRVMLEVLVRREDAERFVEEVRADDPELAAKLRTEERELAAGELN*
Ga0126369_1171525223300012971Tropical Forest SoilVYVRREDAERFIEQVRGDDPELAKELRIEERELGAGELK*
Ga0164308_1089732723300012985SoilVLVRREDAERFIEDVRGDEPELAAKLRIERRELKGVGE*
Ga0157307_116507723300013096SoilMNRPREDERFIEEVRGDDPEIAAKLRIEERELEAGGLN*
Ga0157378_1177508313300013297Miscanthus RhizosphereVTFVRREDAQRFIEEVGGNDPELEERELEAGGAELDSA
Ga0157375_1295823713300013308Miscanthus RhizosphereEDAERFIEEVRGDEPEMAAKLRIEERELEAGGLN*
Ga0075326_109657223300014271Natural And Restored WetlandsVFIRREDAERFIEEVRGDEPEVARSLRVEERELEAGALRPRTG*
Ga0157380_1233530713300014326Switchgrass RhizosphereVEVFVRREDAERFIEEVRGDDPEAAAKLRIVERELDAGGLN*
Ga0173483_1004008423300015077SoilVSVCREDPERFIEEVRGHDADVPAKLRIEERELEAGGLK*
Ga0173483_1075519613300015077SoilRGCRRRVGHLKTFIRREDAERLIEEVRGDEPELAAKLRIEERELEAGGLD*
Ga0173478_1085963223300015201SoilFARREDAERFIEELRRDEPELASALWIEEHELEAGGDN*
Ga0180093_100409723300015258SoilMNRIQFVETFVRREDAGRFIEEVRGDDPEMAANLRIKERELEAGGRN*
Ga0180093_103304013300015258SoilMLGDAVETFIRREEAERFVDEARGDDPDLASYLRIEERELEGGG
Ga0132258_1013959013300015371Arabidopsis RhizosphereVFVRREDAERFTAEMSDHDPELAAKLRVEERELEAGGVN*
Ga0132258_1022071483300015371Arabidopsis RhizosphereVGLEVLVRREDAEGFVGEVRGDDPELAPKLRIEERELEAGGW
Ga0132258_1029559333300015371Arabidopsis RhizosphereVFIRREDAERFIEEVRGDDPEVAASLRIEERELDAGGLN*
Ga0132258_1044956453300015371Arabidopsis RhizosphereVFVRREDAARFFEEVRRDGPTLANQLRIEERELEAGGLN*
Ga0132258_1369124043300015371Arabidopsis RhizosphereEDAERFVEEVRGDEPELAEKLGIEERELEAGGGN*
Ga0132256_10042128523300015372Arabidopsis RhizosphereVFVRREDAARFFEEVRRDGPTLANQVRIEERELEAGGLN*
Ga0132256_10135685523300015372Arabidopsis RhizosphereFLLGVELETFIRREDAERFAEEVRGDEPEMAAKLRIEERELETGGLN*
Ga0132256_10172221723300015372Arabidopsis RhizosphereVFIRREDAERFIEEVRSDDPEVAASLRIEERELDAAG*
Ga0132257_10059430823300015373Arabidopsis RhizosphereVFVRREDAARFFEEVRRDGPTLANQLRMEERELEAGGLN*
Ga0132255_10003309683300015374Arabidopsis RhizosphereMFLRREDVEEVRSDEPELAEKLGIEERELEAGGVN*
Ga0132255_10237778713300015374Arabidopsis RhizosphereREDAERFIEEVRKRQPDLAGTLHIEELVLETGGLN*
Ga0132255_10322946613300015374Arabidopsis RhizosphereSLEVFVRREDAERFIELASDMQIEERELEAGGLN*
Ga0183260_1007728033300017787Polar Desert SandVGAWAERFVEEVRGDDPDLASYLRIEERELEAGGPN
Ga0183260_1066370323300017787Polar Desert SandPLGDSLETFVRREDAERFIEEVRGDDPELAGYLRIEERELEAGGLN
Ga0136617_1036049023300017789Polar Desert SandVWEFVVREDAGRFIEEVRGDDPEPASRLRIEERELEAGGLN
Ga0136617_1149731423300017789Polar Desert SandMSQAREDAERFVEEVRGDDPELALHLRIEERELEAGGLN
Ga0190266_1012950323300017965SoilVRSACDAQRLLEEVRGDDPELASYLRIEERELETGGPN
Ga0184610_124721723300017997Groundwater SedimentAIETFVRREDAERFIEEVRGDDLEHASNLRIEELELEAGGRN
Ga0184634_1018784823300018031Groundwater SedimentVRREDAERFVEEGTDDPELASYLRTEERELEAGGLN
Ga0184635_1001003953300018072Groundwater SedimentVFIRREDAERFIEEVRGDDPELAGSLRIEERELEAGGLN
Ga0184624_1010358323300018073Groundwater SedimentVGYSVHTERFIEEVAQRERDRASSLRIEERELEAGGLN
Ga0184609_1013386423300018076Groundwater SedimentLLPFIRREDAEWFVEDVRGDDPALASYLRIEERELGAAA
Ga0190270_1009310723300018469SoilVFLRREEAARFIEEVRGDEPEIAAKLRIEERELEASGLN
Ga0190270_1132391523300018469SoilEDAERFIEEIRGDEPEIASKLRVAERELEGVGGLNQVRW
Ga0190274_1175022023300018476SoilGVELEVFIRREDAERFIEEVRGDEPEVASYLRIEERELEAGGLN
Ga0190271_1027892713300018481SoilVFIRREDAERFVEEVRGDDPEVAAKLRIEERELEGGGLN
Ga0190271_1060375233300018481SoilVFIRREDAERFVEQVRGDEPEMAAKLRIEEREPEAGHRN
Ga0190271_1076515223300018481SoilVFIGREDAERFIEEVRGDDPEVAAKLRIEERQPEAGGLN
Ga0173481_1011618913300019356SoilSDDDVETFIRREEAERFIEEVRGDDPEMAAKLRIEKRELEAGGLN
Ga0187893_1036475823300019487Microbial Mat On RocksVFVRREDAERFVEEVRSDEPEVAAKLRIEEHELEAGGLN
Ga0193729_121236613300019887SoilFPLATCANAERFIEEVRGDDPELASYLRIEERELEAGGLN
Ga0193697_112164713300020005SoilMLAIENPCRREDAERFIEEERGDDPETAAKLRTEERELKAGGPN
Ga0224500_1008707223300022213SedimentREDAECFIEEVRGGDCDLASYLRIEERELEGGGLN
Ga0222622_1104077613300022756Groundwater SedimentQADAERFIEEVPGDEPKLGAKLRIEERELEAGGLN
Ga0209431_1008077113300025313SoilLEVFIRREDAERFIEEVRGDDPEVAAKLRIEERELDAGDLN
Ga0207697_1013859833300025315Corn, Switchgrass And Miscanthus RhizosphereVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQ
Ga0209341_1118675313300025325SoilVRDAERFIEDVRRDDPDLASYLRIEERELEAGGRN
Ga0207688_1053746213300025901Corn, Switchgrass And Miscanthus RhizosphereEVFVRREDAERFIEQVRGDDPEVAEKLRIEERELKAA
Ga0207650_1034130033300025925Switchgrass RhizosphereRREDAERFIEEVRGDDPDLAAKLRIELRELEAGGLN
Ga0207659_1118243813300025926Miscanthus RhizosphereVFVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA
Ga0207659_1123878213300025926Miscanthus RhizosphereGGSVETFVRREDAERFIEEVRGDEPELVPKLRIKERELALGGLS
Ga0207704_1137930723300025938Miscanthus RhizosphereDAVETFIRRKDAERFIEKVRGDEPDLAATSRIEERELEASGLN
Ga0207689_1042786833300025942Miscanthus RhizosphereVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDS
Ga0207661_1088297223300025944Corn RhizosphereVRREDAERFIEEVRGDDLDPSAKLRVEERRLEAGAVQDSGA
Ga0207708_1183915523300026075Corn, Switchgrass And Miscanthus RhizosphereVFVRREDAEQFVEEVLGDDPEAAARLRVEERELEAGGLN
Ga0207683_1106258223300026121Miscanthus RhizosphereREDAERFIDVVRGDKPELAASLRIEERQLQAGSRT
Ga0256867_1015049523300026535SoilDAIETFVRLEDAERFIEEIRDDEPELASHLRIEERELEAGGLK
Ga0208685_109476813300027513SoilPLGVDLETFIRREDAERFIEEVRGDEPEVAASLRIEERELEAGGVN
Ga0208890_100489633300027523SoilSARCAIETFVRREDAERFIEEVRGDDPGIAAHLRIEERELEGVGGLN
Ga0208890_105169813300027523SoilRVFIRRDDAERFIEEVRGDDPKLASDLRIEERELEAEGLN
Ga0209887_110712923300027561Groundwater SandMNRIQFVETFIRREDAARFIKEVRGDEPELASHVQIVERELETASGERCLS
(restricted) Ga0233416_1000213833300027799SedimentVTRVVRREDAERFSAEVRGDDPEVAAKLRIEEREFEAGGTN
Ga0209023_1013072813300027870Freshwater And SedimentMRREDTERFIEEVRGDDPELASYLRIVERELETVRLRCTSEEHDA
(restricted) Ga0233417_1058096723300028043SedimentFIRREDAERFIEEVRGDDAEVAAKLRIEERELDAGGRPRHA
Ga0247822_1178180113300028592SoilVSLTPRELIRREDPELFIAEVRGDEPEMAVKLRIEERELEAGGLN
Ga0247819_1080946713300028608SoilVRDAERFIAEVRGDDPELASYLRIEERELKAGGVK
Ga0307282_1035098723300028784SoilVFVRREDAERFIEEVRGDEPAIAAKLRIEERELEAGGLNSRVARRQ
Ga0307286_1010336823300028876SoilVETFIRREDAKPFIEEVRGDKSDLASYLQFEERELDAGGPN
Ga0299907_1078661023300030006SoilVCIRREDAERFVEEVRRDAPEEARSLRIVKRELEAGGRN
Ga0307497_1003077023300031226SoilVFIRREDGERLIEEVRGDEREPAARLRIEREPEAGELN
Ga0307497_1013459023300031226SoilVCVRREDAESFVEEVRRDARELATFLRIEELEGDGRN
Ga0299913_1055735123300031229SoilVRREDAERFIEEVRGDEPELAKSLRIEERELRAGELN
Ga0318541_1053886313300031545SoilHASCTLPRRCVETFIRRGGAERFFKDVRSDEPELARWLRIEERELEAVGRN
Ga0315278_1006327433300031997SedimentMNRIQFVETFIRHEDAERFIEEVQGDDPELASYLRIEERELEAGGRN
Ga0310903_1083819323300032000SoilVSFIRREEAERFIEEVRGDDPEMAARLQIEEPELEAGGLN
Ga0310906_1003466333300032013SoilVEVFVRREDAERFIEEVRGDDPEIAAKLRIEERELETGGSN
Ga0310906_1103694613300032013SoilDAIEVFLRREDAERFVAEVRGDDPEVAASLRIEERELEPGGLS
Ga0310890_1060109623300032075SoilVFVRREDAERFIEGVRGDDPGIAAKLRIEEREPEAGG
Ga0315270_1039003523300032275SedimentRREHAERFIEEVRGDDPELAGYLRIEERELEAGGLN
Ga0315287_1292366813300032397SedimentFGDAVETFVRREDAERFIEEVRGDDPEMASYLRIEEREREAGGVN
Ga0315273_1025914113300032516SedimentGSLDHPLGDAVETFLRREDAERFTAEVRSDDPDLASYLRIEERELEAGGLN
Ga0315273_1137780423300032516SedimentVFARREDAERVVEEVRADDPDLASYLRIDERKLEVGELN
Ga0247829_1108586723300033550SoilRGEREVGCASEDAERFIEEVRGDDPELASDLRIEKRELEAGARN
Ga0364924_020638_1178_12973300033811SedimentTFLRREDAERFVAEVRGDDPELASYLRIEERELEAGGLN
Ga0364926_010594_413_5563300033812SedimentMNRIQFVETFIRREDAGRFIEEVRGDDPEMAANLRIEERELEAGGRN
Ga0364930_0239012_136_2553300033814SedimentVGAGREDAERFIEEVRGDDPDIASYLRIEERELEAGGRN
Ga0364937_145801_390_5093300034113SedimentARTGRADAERFVEEVRGDDPELASYLRIEERELETCGLN
Ga0364938_017125_97_2313300034114SedimentMNRIQFVETFIRREDAGRCIEGVRGDDPEMAAKIRIEERENGQG
Ga0364925_0243934_1_1263300034147SedimentVELEVFIRREDAERFIEEVRGDEPEVAAQLRIEELGVGGPN
Ga0364940_0012909_1524_16673300034164SedimentMNRIQFVETFIRREDAGRFIEEVRGDDPEMAANLRIKERELEAGGRN
Ga0364931_0034555_1364_14923300034176SedimentRAEVFVRREDVERFFEEVRGDDPELASYLRIEERKLEGGGLN
Ga0364931_0313614_3_1373300034176SedimentSAPDRARTGRADAERFVEEVRGDDPELASYLRIEERELETCGLN
Ga0364934_0113886_530_6493300034178SedimentVFIRLEHAERFVEEVQGDDPELAACLRIEDRELEAGGLS
Ga0364943_0025980_3_1433300034354SedimentPLDVELEGFHRREDAERFIEEVQSDDPDRASCLRIEERELEAGGLN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.