NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F037185

Metagenome / Metatranscriptome Family F037185

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F037185
Family Type Metagenome / Metatranscriptome
Number of Sequences 168
Average Sequence Length 69 residues
Representative Sequence MYDIGNPILWIIGVPALGVLLFLLRGHFSAETRERRRRGKSHRPVISRKQGPTVRLAVDVDKPKRDRKR
Number of Associated Samples 115
Number of Associated Scaffolds 167

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.56 %
% of genes near scaffold ends (potentially truncated) 27.38 %
% of genes from short scaffolds (< 2000 bps) 78.57 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.810 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(15.476 % of family members)
Environment Ontology (ENVO) Unclassified
(36.905 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(37.500 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 36.08%    β-sheet: 0.00%    Coil/Unstructured: 63.92%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 167 Family Scaffolds
PF06685DUF1186 13.77
PF04909Amidohydro_2 5.99
PF01910Thiamine_BP 3.59
PF00072Response_reg 2.99
PF07929PRiA4_ORF3 1.80
PF07883Cupin_2 1.80
PF13927Ig_3 1.20
PF07517SecA_DEAD 1.20
PF01261AP_endonuc_2 1.20
PF13360PQQ_2 1.20
PF00578AhpC-TSA 1.20
PF00817IMS 1.20
PF00756Esterase 1.20
PF00248Aldo_ket_red 0.60
PF00702Hydrolase 0.60
PF13692Glyco_trans_1_4 0.60
PF03631Virul_fac_BrkB 0.60
PF01904DUF72 0.60
PF14023DUF4239 0.60
PF13905Thioredoxin_8 0.60
PF13899Thioredoxin_7 0.60
PF00834Ribul_P_3_epim 0.60
PF02810SEC-C 0.60
PF02146SIR2 0.60
PF07690MFS_1 0.60
PF16401DUF5009 0.60
PF00884Sulfatase 0.60
PF04545Sigma70_r4 0.60
PF13378MR_MLE_C 0.60
PF13205Big_5 0.60
PF064393keto-disac_hyd 0.60
PF13852DUF4197 0.60
PF07992Pyr_redox_2 0.60
PF00730HhH-GPD 0.60
PF00582Usp 0.60
PF00149Metallophos 0.60
PF04055Radical_SAM 0.60
PF02837Glyco_hydro_2_N 0.60
PF11721Malectin 0.60
PF14237GYF_2 0.60
PF01713Smr 0.60
PF00255GSHPx 0.60
PF04616Glyco_hydro_43 0.60
PF07075DUF1343 0.60
PF02566OsmC 0.60
PF01609DDE_Tnp_1 0.60
PF09844DUF2071 0.60
PF04191PEMT 0.60
PF028262-Hacid_dh_C 0.60
PF00266Aminotran_5 0.60
PF11799IMS_C 0.60
PF07661MORN_2 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 167 Family Scaffolds
COG0011Thiamin-binding stress-response protein YqgV, UPF0045 familyCoenzyme transport and metabolism [H] 3.59
COG0389Nucleotidyltransferase/DNA polymerase DinP involved in DNA repairReplication, recombination and repair [L] 1.20
COG0653Preprotein translocase subunit SecA (ATPase, RNA helicase)Intracellular trafficking, secretion, and vesicular transport [U] 1.20
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.60
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.60
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.60
COG5421TransposaseMobilome: prophages, transposons [X] 0.60
COG3876Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 familyCell wall/membrane/envelope biogenesis [M] 0.60
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.60
COG3293TransposaseMobilome: prophages, transposons [X] 0.60
COG3250Beta-galactosidase/beta-glucuronidaseCarbohydrate transport and metabolism [G] 0.60
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.60
COG2849Antitoxin component YwqK of the YwqJK toxin-antitoxin moduleDefense mechanisms [V] 0.60
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 0.60
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.60
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.60
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.60
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 0.60
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.60
COG0846NAD-dependent protein deacetylase, SIR2 familyPosttranslational modification, protein turnover, chaperones [O] 0.60
COG0386Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxidesDefense mechanisms [V] 0.60
COG0177Endonuclease IIIReplication, recombination and repair [L] 0.60
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.60
COG0036Pentose-5-phosphate-3-epimeraseCarbohydrate transport and metabolism [G] 0.60


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.81 %
UnclassifiedrootN/A26.19 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_101141111All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300001213|JGIcombinedJ13530_106392579All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium693Open in IMG/M
3300001213|JGIcombinedJ13530_106750693All Organisms → cellular organisms → Bacteria → PVC group545Open in IMG/M
3300005536|Ga0070697_101650314Not Available573Open in IMG/M
3300006642|Ga0075521_10131121All Organisms → cellular organisms → Bacteria → PVC group1167Open in IMG/M
3300009091|Ga0102851_11580030Not Available733Open in IMG/M
3300009091|Ga0102851_13438611Not Available508Open in IMG/M
3300009131|Ga0115027_10070346All Organisms → cellular organisms → Bacteria1896Open in IMG/M
3300009162|Ga0075423_11540437Not Available714Open in IMG/M
3300009167|Ga0113563_10289091All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300009167|Ga0113563_10497708All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1328Open in IMG/M
3300009167|Ga0113563_11103998All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300009167|Ga0113563_12415673All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia633Open in IMG/M
3300009167|Ga0113563_13907792Not Available505Open in IMG/M
3300009502|Ga0114951_10027269All Organisms → cellular organisms → Bacteria3719Open in IMG/M
3300009518|Ga0116128_1206986Not Available550Open in IMG/M
3300009548|Ga0116107_1050958All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300009552|Ga0116138_1008732All Organisms → cellular organisms → Bacteria → PVC group3586Open in IMG/M
3300009632|Ga0116102_1195681All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium544Open in IMG/M
3300009637|Ga0116118_1184109All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium661Open in IMG/M
3300009640|Ga0116126_1013793All Organisms → cellular organisms → Bacteria → Proteobacteria3751Open in IMG/M
3300009641|Ga0116120_1187435Not Available658Open in IMG/M
3300009644|Ga0116121_1019752All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2159Open in IMG/M
3300009644|Ga0116121_1182016All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium667Open in IMG/M
3300009655|Ga0116190_1019808All Organisms → cellular organisms → Bacteria3416Open in IMG/M
3300009764|Ga0116134_1093475All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300009771|Ga0116155_10000141All Organisms → cellular organisms → Bacteria81496Open in IMG/M
3300009839|Ga0116223_10896655Not Available506Open in IMG/M
3300009868|Ga0130016_10001323All Organisms → cellular organisms → Bacteria51527Open in IMG/M
3300009868|Ga0130016_10447347All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium842Open in IMG/M
3300010339|Ga0074046_10631268Not Available632Open in IMG/M
3300010343|Ga0074044_10030787All Organisms → cellular organisms → Bacteria3783Open in IMG/M
3300010366|Ga0126379_11086656All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300010403|Ga0134123_11731311Not Available677Open in IMG/M
3300012411|Ga0153880_1228633Not Available1100Open in IMG/M
(restricted) 3300013138|Ga0172371_10005502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia18743Open in IMG/M
(restricted) 3300013138|Ga0172371_10021608All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula7787Open in IMG/M
3300014151|Ga0181539_1041356All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2255Open in IMG/M
3300014151|Ga0181539_1322329Not Available563Open in IMG/M
3300014152|Ga0181533_1132063All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300014153|Ga0181527_1078429All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300014155|Ga0181524_10086751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1795Open in IMG/M
3300014158|Ga0181521_10080216All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2077Open in IMG/M
3300014158|Ga0181521_10148313All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300014159|Ga0181530_10289105All Organisms → cellular organisms → Bacteria → PVC group864Open in IMG/M
3300014161|Ga0181529_10138891All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300014161|Ga0181529_10277639All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia944Open in IMG/M
3300014164|Ga0181532_10624663All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300014490|Ga0182010_10062628All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1797Open in IMG/M
3300014490|Ga0182010_10279844Not Available892Open in IMG/M
3300014491|Ga0182014_10019646All Organisms → cellular organisms → Bacteria5805Open in IMG/M
3300014491|Ga0182014_10040647All Organisms → cellular organisms → Bacteria3374Open in IMG/M
3300014496|Ga0182011_10177521All Organisms → cellular organisms → Bacteria → PVC group1458Open in IMG/M
3300014496|Ga0182011_10998158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium519Open in IMG/M
3300014498|Ga0182019_10092949All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1833Open in IMG/M
3300014498|Ga0182019_10196688All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1302Open in IMG/M
3300014498|Ga0182019_10213488All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300014502|Ga0182021_10068394All Organisms → cellular organisms → Bacteria4126Open in IMG/M
3300014502|Ga0182021_10068394All Organisms → cellular organisms → Bacteria4126Open in IMG/M
3300014502|Ga0182021_11055160All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium978Open in IMG/M
3300014502|Ga0182021_12211390All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium662Open in IMG/M
3300014502|Ga0182021_12749131Not Available591Open in IMG/M
3300014839|Ga0182027_10063359All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula4569Open in IMG/M
3300014875|Ga0180083_1155009All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium506Open in IMG/M
3300017931|Ga0187877_1002204All Organisms → cellular organisms → Bacteria17870Open in IMG/M
3300017941|Ga0187850_10000300All Organisms → cellular organisms → Bacteria67888Open in IMG/M
3300017941|Ga0187850_10167856All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300017946|Ga0187879_10326492All Organisms → cellular organisms → Bacteria → PVC group851Open in IMG/M
3300017948|Ga0187847_10499811All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium674Open in IMG/M
3300018005|Ga0187878_1147459All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300018008|Ga0187888_1063016All Organisms → cellular organisms → Bacteria → PVC group1662Open in IMG/M
3300018008|Ga0187888_1134478All Organisms → cellular organisms → Bacteria → PVC group1024Open in IMG/M
3300018009|Ga0187884_10305937All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium642Open in IMG/M
3300018012|Ga0187810_10041514All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1716Open in IMG/M
3300018014|Ga0187860_1371680All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium540Open in IMG/M
3300018021|Ga0187882_1026217All Organisms → cellular organisms → Bacteria3110Open in IMG/M
3300018025|Ga0187885_10538889Not Available519Open in IMG/M
3300018035|Ga0187875_10263580Not Available938Open in IMG/M
3300018040|Ga0187862_10482918All Organisms → cellular organisms → Bacteria → PVC group748Open in IMG/M
3300018046|Ga0187851_10687554All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium577Open in IMG/M
3300018057|Ga0187858_10256572All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300018086|Ga0187769_10449812All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300019247|Ga0179937_1138873All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia700Open in IMG/M
3300020158|Ga0194038_1026763All Organisms → cellular organisms → Bacteria1889Open in IMG/M
3300021602|Ga0194060_10081199All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1815Open in IMG/M
3300022524|Ga0224534_1003141All Organisms → cellular organisms → Bacteria7177Open in IMG/M
3300022555|Ga0212088_10005453All Organisms → cellular organisms → Bacteria23418Open in IMG/M
3300022555|Ga0212088_10549912Not Available727Open in IMG/M
3300023088|Ga0224555_1108747All Organisms → cellular organisms → Bacteria → PVC group855Open in IMG/M
3300025162|Ga0209083_1205210Not Available732Open in IMG/M
3300025500|Ga0208686_1095310All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium638Open in IMG/M
3300025597|Ga0208825_1055852Not Available1064Open in IMG/M
3300025716|Ga0209746_1054850All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1335Open in IMG/M
3300025878|Ga0209584_10045625All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300025878|Ga0209584_10355852Not Available564Open in IMG/M
3300025888|Ga0209540_10535501All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300027871|Ga0209397_10236823Not Available854Open in IMG/M
3300027885|Ga0209450_10258607All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300027896|Ga0209777_10030162All Organisms → cellular organisms → Bacteria → Proteobacteria5173Open in IMG/M
3300027900|Ga0209253_10960955All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium594Open in IMG/M
3300028556|Ga0265337_1002232All Organisms → cellular organisms → Bacteria9005Open in IMG/M
3300028558|Ga0265326_10224407All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300029817|Ga0247275_1107624All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300030000|Ga0311337_11213344All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia660Open in IMG/M
3300031232|Ga0302323_101949603All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium667Open in IMG/M
3300031834|Ga0315290_11686403Not Available509Open in IMG/M
3300031873|Ga0315297_10226659All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1545Open in IMG/M
3300031902|Ga0302322_100073357All Organisms → cellular organisms → Bacteria3479Open in IMG/M
3300031902|Ga0302322_100550355All Organisms → cellular organisms → Bacteria1351Open in IMG/M
3300031912|Ga0306921_10238655All Organisms → cellular organisms → Bacteria2130Open in IMG/M
3300031997|Ga0315278_10879442All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300032156|Ga0315295_10502914All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300032156|Ga0315295_10741579Not Available989Open in IMG/M
3300032160|Ga0311301_10709916All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1411Open in IMG/M
3300032164|Ga0315283_12181329All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300032177|Ga0315276_11140442All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300032177|Ga0315276_11530174Not Available693Open in IMG/M
3300032256|Ga0315271_10683716All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300032275|Ga0315270_10184057Not Available1274Open in IMG/M
3300032275|Ga0315270_10891070All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium587Open in IMG/M
3300032275|Ga0315270_11056803Not Available539Open in IMG/M
3300032275|Ga0315270_11205475Not Available504Open in IMG/M
3300032342|Ga0315286_10352198All Organisms → cellular organisms → Bacteria1553Open in IMG/M
3300032397|Ga0315287_11340562All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300032397|Ga0315287_12064527All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300032397|Ga0315287_12768089All Organisms → cellular organisms → Bacteria → PVC group520Open in IMG/M
3300032401|Ga0315275_10025652All Organisms → cellular organisms → Bacteria6119Open in IMG/M
3300032401|Ga0315275_11396059All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300032401|Ga0315275_11547006All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300032516|Ga0315273_12777701All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300032805|Ga0335078_10025237All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia8813Open in IMG/M
3300032897|Ga0335071_10103648All Organisms → cellular organisms → Bacteria2790Open in IMG/M
3300033402|Ga0326728_10001403All Organisms → cellular organisms → Bacteria85205Open in IMG/M
3300033402|Ga0326728_10008382All Organisms → cellular organisms → Bacteria25731Open in IMG/M
3300033402|Ga0326728_10026078All Organisms → cellular organisms → Bacteria10388Open in IMG/M
3300033402|Ga0326728_10166466All Organisms → cellular organisms → Bacteria2331Open in IMG/M
3300033405|Ga0326727_10423190All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1206Open in IMG/M
3300033405|Ga0326727_10763919Not Available755Open in IMG/M
3300033414|Ga0316619_10179023All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300033416|Ga0316622_101099641All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300033416|Ga0316622_103259950Not Available513Open in IMG/M
3300033418|Ga0316625_102113995Not Available558Open in IMG/M
3300033418|Ga0316625_102393593Not Available531Open in IMG/M
3300033433|Ga0326726_10936669All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300033480|Ga0316620_10139211All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300033480|Ga0316620_11932046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300033480|Ga0316620_12431033Not Available521Open in IMG/M
3300033482|Ga0316627_102220956Not Available574Open in IMG/M
3300033483|Ga0316629_10091312All Organisms → cellular organisms → Bacteria1690Open in IMG/M
3300033485|Ga0316626_10280565All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300033485|Ga0316626_11972873Not Available529Open in IMG/M
3300033487|Ga0316630_11151224Not Available686Open in IMG/M
3300033487|Ga0316630_11249731Not Available661Open in IMG/M
3300033488|Ga0316621_10353315Not Available986Open in IMG/M
3300033513|Ga0316628_100510394All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1553Open in IMG/M
3300033513|Ga0316628_102103417Not Available749Open in IMG/M
3300033513|Ga0316628_103438156All Organisms → cellular organisms → Bacteria → PVC group573Open in IMG/M
3300033513|Ga0316628_104084016Not Available521Open in IMG/M
3300033521|Ga0316616_101226073All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium955Open in IMG/M
3300033521|Ga0316616_101927180All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300033521|Ga0316616_103185021Not Available618Open in IMG/M
3300033557|Ga0316617_101430504Not Available695Open in IMG/M
3300033557|Ga0316617_101781551Not Available628Open in IMG/M
3300033755|Ga0371489_0137479All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1352Open in IMG/M
3300033823|Ga0334837_002355All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia12145Open in IMG/M
3300034158|Ga0370507_0294660Not Available541Open in IMG/M
3300034169|Ga0370480_0013563All Organisms → cellular organisms → Bacteria2861Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil15.48%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment12.50%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland9.52%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen7.74%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.14%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog6.55%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil4.76%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands4.17%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.98%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.38%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge2.38%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.79%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.79%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.79%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.19%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.19%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.19%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion1.19%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.19%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.19%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.19%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.19%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.19%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.19%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater1.19%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.60%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.60%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.60%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.60%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009641Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150EnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300009655Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaGEngineeredOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009771Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaGEngineeredOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300009868Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plantEngineeredOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012411Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013138 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12mEnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014153Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014161Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014875Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10DEnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019247Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC028_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300020158Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-6mEnvironmentalOpen in IMG/M
3300021602Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5mEnvironmentalOpen in IMG/M
3300022524Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24EnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300023088Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34EnvironmentalOpen in IMG/M
3300025162Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025597Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025716Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300028556Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaGHost-AssociatedOpen in IMG/M
3300028558Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaGHost-AssociatedOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300033823Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34EnvironmentalOpen in IMG/M
3300034158Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18EnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10114111123300001213WetlandMLDFKHPLFWLLGVVVLAAVLSLMRGHFGSEALARRRREKSHKPVVSRKQGPTVRLAVDVGKSKRDRKD*
JGIcombinedJ13530_10639257913300001213WetlandERARIGKMLTSILSMLDAGNPVMWLVGIIALTVLFFLLRGCFTAEARERRRRDKSHRPVISRRQGPTVRLAVDVDKPKRDRKP*
JGIcombinedJ13530_10675069323300001213WetlandMLGIAALGVALFSLRGHFTTEARARRRRERSHRPAISRKKGPTVRLAVDADKPKADHER*
Ga0070697_10165031423300005536Corn, Switchgrass And Miscanthus RhizosphereTATIDILTMLDIRNPIFWLTAVIALAVVLFLARGQFSAEARSRRRRQRSHRPVISRKQGPTVRLAVEVDKPKRDRKS*
Ga0075521_1013112123300006642Arctic Peat SoilMFAAGNPVVWLIGIIVLGIVFFLLRGYFSAEARARRRREKSHRRVVSWKQGPIVRLAVDADKPKRDCKR*
Ga0102851_1158003013300009091Freshwater WetlandsMFDIGNPILWIIGVPALGLLLFLLRGHFSVETRERRRRGQSHRPVISQKHGPTVRSAVDVDKPKRNRKG*
Ga0102851_1343861113300009091Freshwater WetlandsMAGISNPILWLSGVLAVGVVVFLVRGYFGAEARARRRRSRSHSPLTSRRHGPTVKLAVYVDKPKRDRER*
Ga0115027_1007034623300009131WetlandMGVFASGIVFFLLRGHFSAEARARRRRERSNRPVISRKQGPTVKLAVNAGKTKGDRKR*
Ga0075423_1154043723300009162Populus RhizosphereMLDIRNPIFWLTVVIALAVVLFLARGQFNAEARSRRRRQRSHRPVISRKQGPTVRLAVEVDKPKRDRKS*
Ga0113563_1028909123300009167Freshwater WetlandsMATAAIEILTMLDISNPILWLIGVIALAVVLFLLRRHFSTEARARRRREKSNRPVISRKQGPTVRLAVDVGKPKRDRKR*
Ga0113563_1049770813300009167Freshwater WetlandsMAGISNPILWLSGVLAVGVVVFLVRGYFGAEARARRRRSRSHRPLTSRRHGPTVKLAVHVDKPKPDRER*
Ga0113563_1110399833300009167Freshwater WetlandsMLDIRNLILWLIGVLAVAIALFLMRGHFSPEARARRRREKSNRPVISRKRGPNVKLAVNAGKPKGDRKG*
Ga0113563_1241567313300009167Freshwater WetlandsMHDMGNPILWIIGVPALGVLLFLLRGHFSAETRERRRRGKSHRPVISQKHGPTVRSAVDVDKPKGDRKR*
Ga0113563_1390779223300009167Freshwater WetlandsMLDIRNPVPSLLGIIALGAVFLLARRHFSPEARARRRRDKSHRPVISRKQGPTVRLAVNVDESKGDRKG*
Ga0114951_1002726923300009502FreshwaterMFNNGNSILWIISVPALAVLLFLLRGHFSAETRERRRRGKSHWPVISRKQGPTVRLAVNAGKPKRDRKR*
Ga0116128_120698613300009518PeatlandLEDGRQAALAMRLKGATLGASMLGIGNSILWPIGVLALGVVLFLVRGRFTAEARARRRREKSYKPVVSRKQGPTVR
Ga0116107_105095823300009548PeatlandMLDIRNPLFWLLGVVVVVAALSLVRSHFSAEALERRRREKSHRPVISRKQGPTVKLAVDVGKPKRDRKGGGT*
Ga0116138_100873243300009552PeatlandMGDIGNPILWLIGVLALGVVLFLVRGRFSAEARARRRREKSHRPVISRKKGPTVRLAVDVDKPRRDRNR*
Ga0116102_107768233300009632PeatlandPEPARLGTTPIAILTMLGIGNPILWIIGVPALGVLLYLLRGHFSAETRARRRRGQSHRPVISQKHGPTVRSAVNADKPKGDRKG*
Ga0116102_119568113300009632PeatlandMRLKGATLGASMLGIGNSILWPIGVLALGVVLFLVRGRFTAEARARRRREKSYKPVVSRKQGPTVRLAVDVDKPKRDRKR*
Ga0116118_118410923300009637PeatlandQLEDGRQAALAMRLKGATLGASMLGIGNSILWPIGVLALGVVLFLVRGRFTAEARARRRREKSHKPVVSRKQGPTVRLAVDVDKPKRDRKR*
Ga0116126_101379363300009640PeatlandMLDLRNPVVCLIGILALALVLFLLRRHFTAEARERRRRAKSHRPVVSRKQGPTVRLAVDVDKPKCDRKR*
Ga0116120_118743513300009641PeatlandMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARERRRRAKSHRRVVSRKQGPTVRLAVDVDKPKRDRKR*
Ga0116121_101975223300009644PeatlandMLDPQNPVVWLIGIIAFAVAFFLLRSHFTVEARERRRRAKSHRPVVSRRQGPTVRLAVDVDKPRRDRKP*
Ga0116121_118201623300009644PeatlandMLGIGNPILWIIGVPALGVLLYLLRGHFSAETRARRRRGQSHRPVISQKHGPTVRSAVNADKPKGDRKG*
Ga0116190_101980843300009655Anaerobic Digestor SludgeMLDFTNPILWLLGIPAIGVLLFLLAGHFNAEARERRRRMRSHRPVVSRKPGPTVKFAVHTGKSKSRGKNPS*
Ga0116134_109347513300009764PeatlandMLDARNPVLWLMGIIAFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKR*
Ga0116155_10000141423300009771Anaerobic Digestor SludgeMFDITNPILWLTGIIALAVVFFLLRGHFNAEARARRRRDKSNRPIISRKQGPSIRLAVDVDKPKRERKR*
Ga0116223_1089665523300009839Peatlands SoilMFTIENPFLWLIGVPALGFLLFLLRGHFSADTRERRRGESHRPVIAQKHGPTVRSALHVDKPKRDRKR*
Ga0130016_10001323353300009868WastewaterMFTIENPFLWLVGLPALGVLLFLLRGHFRAETRARRRGESHRPVIPQKHGPTFHAAADKPSRNHKR*
Ga0130016_1044734723300009868WastewaterMFTIENPFLWLVGLPALGVLLFLLRGHFRAETPARRRGESHRPVIPQKPGPTFHAAADKPRRDHKR*
Ga0074046_1063126833300010339Bog Forest SoilGVFARAVVLFLLRGRFRGEGRARRRREKSHRPVVSRKQHPTVKLAVNAGKPKGHGKS*
Ga0074044_1003078723300010343Bog Forest SoilMLGTRSPVQWVIGVIALAVVLFLLRGRFSAEARARRRREKSHRPVVSRKQHPTVKLAVNAGKPKGHGKS*
Ga0126379_1108665623300010366Tropical Forest SoilGVIALAVVLFLARGYFSAETRTRRRRDKSHRPVTSRKPGPSVRLAVDVDKPKRGRKG*
Ga0134123_1173131123300010403Terrestrial SoilMLDIRNPIFWLTVVIALAVVLFLARGQFSAEARSRRRRQRSHRPVISRKQGPTVRLAVEVDKPKRDRKS*
Ga0153880_122863313300012411Freshwater SedimentGNSILWIISVPALAVLLFLLRGHFSAETRERRRRGKSHWPVISRKQGPTVRLAVNAGKPKRDRKR*
(restricted) Ga0172371_1000550263300013138FreshwaterMFSIENPFLWLVGLPAIGILLFLLRGHFRAETRARRRGESHRPVISQKHSRPLRAAPGKPERDRKR*
(restricted) Ga0172371_1002160843300013138FreshwaterMEIMTILDIRNPVVWLVGFIALGILFFLLRGCFGAEARERRRREKSHRPVISRKQGPTVKLAVNVDKPKGDRKR*
Ga0181539_104135613300014151BogMLDARNPVVWLIGIIAVAIVLFLMRGHFTAEARERRRRAKSHRRVVSRKQGPTVRLAVDVDKSKRDRKH
Ga0181539_132232923300014151BogMRDIGNPILWLIGALALVIVLFLARGRFSARTRVRRRRERSHRPVVSRKPGPTVRLAVDVDKPERDRER*
Ga0181533_113206333300014152BogAILTMLDARNPVVWLIGIIAVAIVLFLMRGHFTAEARERRRRAKSHRRVVSRKQGPTVRLAVDVDKSKRDRKH*
Ga0181527_107842923300014153BogMRDIGNPILWLIGVLALVIVLFLARGRFSAQTRVRRRRERSHRPVVSRKPGPTVRLAVDVDKPERDRER*
Ga0181524_1008675123300014155BogMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKR*
Ga0181521_1008021623300014158BogMRDIGNPILWLIGVLALVIVLFLARGRFSARTRVRRRRERSHRPVVSRKPGPTVRLAVDVDKPERDRER*
Ga0181521_1014831323300014158BogMLTMLDARNPVLWLMGIIAFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKR*
Ga0181530_1028910523300014159BogMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKP*
Ga0181529_1013889113300014161BogMNASLATLDARNPIVWLIGIIVLTVVFFLLRGLFTADARERRRRDKSHKPVVSRKQGPTVRLAVEVDKPKSDRRVE*
Ga0181529_1027763933300014161BogMLDARNPGVWLIGVVALAVAFILLRGLFAAEARERRRREKSHKPVVSRKQGPTVRLAVDVEKTKGDRNR*
Ga0181532_1062466313300014164BogMLDPQNPVVWLIGIIALAIVVFLLRGHFTFEARARRRREKSNRPVVSRKQGPTVRLAVDVDKPKRDRKR*
Ga0182010_1006262823300014490FenMLDARNSVVWLIGIIALAIAFFLLRGHFTAEARARRRREKSNRPVVSRKQGPAVRLAADVDKAKRDRWR*
Ga0182010_1027984423300014490FenMFNIGNPILWIIGVPALGVLFFLLRGHFSAETRERRRRGKSHRPVISRKPGPNVKLVVNVGKPKGDRKR*
Ga0182014_1001964653300014491BogMLTMLEARNPVVWVIGIIAFAVAMAFLRDHFTAEARARRRLDKSHRPVISRKQGPTVQLAVHVDKP*
Ga0182014_1004064743300014491BogMIENRNPILWLIVVLGLGLVLSLVCSRLSPEARSRRRREKSHRPVVSRKQGPTVKLAVDVGKPRRGRKG*
Ga0182011_1017752123300014496FenMLGIGNPILWIIGIPALGVLLFLLRGHFSAETRARRRRGQSHRPVISQKHGPTVRPAVNADKPKGDRKG*
Ga0182011_1099815823300014496FenGIIALAIAFFLLRGHFTAEAQARRRREKSNRPVVSRKQGPAVRLAADVDKAKRDRRR*
Ga0182019_1009294913300014498FenMWLIGIIALAIAFFLLRGHFTAEARARRRREKSNRPVISRKRGPTVRLAVKVDKPKRERKD*
Ga0182019_1019668833300014498FenVWLIGIIALAIILFLVRGHFTAEALARRRREKSNRPVVSRKQGPAVRLAADVDKAKRDRWR*
Ga0182019_1021348823300014498FenMFTIENPFLWLIGVPALGVLLFLLRGHFSAETRARRRRGESHRPVISQQHGPTVRAAVNAGKPKRDRKR*
Ga0182021_1006839433300014502FenMLDARNSVVWLIGIIALAIAFFLLRGHFTAEARARRRREKSNRPVVSRKQGPAVRLAADVDKAKRDRRR*
Ga0182021_1006839463300014502FenMFTIENPFLWLIGVPALGVLLFLLRGHFSAETRARRRRGESHRPVISQEHGPTVRAAVNAGKPKRDRKR*
Ga0182021_1105516023300014502FenMFTIENPILWIIGVPALGVLLFLLRGHFSAETRERRRRGKSHRPVVSRKRGPTVKLAVDVDKPKRGRKH*
Ga0182021_1221139023300014502FenMLTMLDARNPVVWLIGIIAFIVAFFFLRGHFTPEARARRRLDKSHRPVISRKHGPTVRLAVDVDKPKRDRKR*
Ga0182021_1274913113300014502FenMFTLENSILLIIGVPALGVLLFWLVSHFRAEARARRHRGESHRPVVSQNHGPPLRAAAGKPKHDHKR*
Ga0182027_1006335943300014839FenMLGNGNPILWLIGAIGLGVVFFLVRGHFSAEARARRRREKSHQRVISRKQGPAVRLAVKVDPPKRDRKR*
Ga0180083_115500923300014875SoilMPDIRNPILWVIGVLALGVVLFLLRGRFRAEARVRRRREKSNRPVVSRKQGPTVRLAV
Ga0187877_100220443300017931PeatlandMLDIRNPLFWLLGVVVVVAALSLVRSHFSAEALERRRREKSHRPVISRKQGPTVKLAVDVGKPKRDRKGGGT
Ga0187850_10000300413300017941PeatlandMGDIGNPILWLIGVLALGVVLFLVRGRFSAEARARRRREKSHRPVISRKKGPTVRLAVDVDKPRRDRNR
Ga0187850_1016785643300017941PeatlandMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKR
Ga0187879_1032649223300017946PeatlandMLTMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKR
Ga0187847_1049981123300017948PeatlandMLDPQNPVVWLIGIIAFAVAFFLLRSHFTVEARERRRRAKSHRPVVSRRQGPTVRLAVDVDKPRRDRKP
Ga0187878_114745913300018005PeatlandMLDIRNPVVWLIGVLALGIVFFLLRGRFSAEARARRRREKSNRPVISRKKGPTVKLAVNAGKPKGDRNG
Ga0187888_106301623300018008PeatlandMLDAGNPVVWLIGIIAVAIVVFLMRGHFTAEARERRRRAKSHRRVVSRKQGPTVRLAVDVDKPKRDRKR
Ga0187888_113447823300018008PeatlandMLTMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQCPTVRLAVDVDKPKRDRKR
Ga0187884_1030593723300018009PeatlandMRLKGATLGASMLGIGNSILWPIGVLALGVVLFLVRGRFTAEARARRRREKSYKPVVSRKQGPTVRLAVDVDKPKRDRKR
Ga0187810_1004151423300018012Freshwater SedimentMLDAGNPVVWLLGVIALTFVFFFLRAHFSAEARARRRLEKSHRPVVSRKKGPTVRLAVDVDKPKRVRKRGRK
Ga0187860_137168013300018014PeatlandMLDLRNPVVCLIGILALALVLFLLRRHFTAEARERRRRAKSHRPVVSRKQGPTVRLAVDVDKPKCDRKR
Ga0187882_102621733300018021PeatlandMLDARNPVLWLVGIIALAAAFFLLRGRFSVEARARRRREKSHRPVVSRKQGPTVKLAVDVGKPKGDRKS
Ga0187885_1053888923300018025PeatlandMLTMLDARNPIVWLIGIIVFAVAFFFLRGHFTAEARERRRRAKSHRRVVSRKQGPTVRLAVDVDKPKRDRKR
Ga0187875_1026358013300018035PeatlandMLDPQNPVVWLIGIIAFAVAFFLLRSHFTVEARERRRRAKSHRPVVSRRQGPTVRLAVD
Ga0187862_1048291823300018040PeatlandVWLIGIIAVAIVVFLMRGHFTAEARERRRRAKSHRRVVSRKQGPTVRLAVDVDKPKRDRK
Ga0187851_1068755413300018046PeatlandGVPALGVLLYLLRGHFSAETRARRRRGQSHRPVISQKHGPTVRSAVNADKPKGDRKG
Ga0187858_1025657223300018057PeatlandMLTMLDARNPVLWLMGIIAFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAVDVDKPKRDRKR
Ga0187769_1044981223300018086Tropical PeatlandMLGISPMQWVIGVIALAVVLFLLRGHFSAEARARRRREKSHRPVVSRKQGPTVKLAVNAGKPKGDRKG
Ga0179937_113887323300019247Anaerobic Digestor SludgeMFDITNPILWLTGIIALAVVFFLLRGHFNAEARARRRRDKSNRPIISRKQGPSIRLAVDVDKPKRERKR
Ga0194038_102676323300020158Anoxic Zone FreshwaterMFDMGNSILWIIGVPALGVLLFLLRGHFSAETRDRRRRGESHRPAISRKQGPPVRLAGNAGKPKGDRKH
Ga0194060_1008119933300021602Anoxic Zone FreshwaterMFNNGNSILWIISVPALAVLLFLLRGHFSAETRERRRRGKSHWPVISRKQGPTVRLAVNAGKPKRDRKR
Ga0224534_100314183300022524SoilMIENRNPILWLIVVLGLGLVLSLVCSRLSPEARSRRRREKSHRPVVSRKQGPTVKLAVDVGKPRRGRKG
Ga0212088_10005453193300022555Freshwater Lake HypolimnionMLDIKNPLFWLLGVVVVVAIRSLVRSNFSTEAREQRRRERSHQPVVSRRHGPTIRLAVDVGKPRRVRKG
Ga0212088_1054991213300022555Freshwater Lake HypolimnionMFDMGNSILWIIGVPALGVLLFLLRGHFSAETRDRRRRGESHRPAISRKQGPPVRLAGNAGKPKGDRK
Ga0224555_110874713300023088SoilMLEARNPVVWVIGIIAFAVAMAFLRDHFTAEARARRRLDKSHRPVISRKQGPTVQLAVHVDKP
Ga0209083_120521013300025162FreshwaterIEILTMFNNGNSILWIISVPALAVLLFLLRGHFSAETRERRRRGKSHWPVISRKQGPTVRLAVNAGKPKRDRKR
Ga0208686_109531023300025500PeatlandMLGIGNPILWIIGVPALGVLLYLLRGHFSAETRARRRRGQSHRPVISQKHGPTVRSAVNADKPKGDRKG
Ga0208825_105585223300025597Anaerobic Digestor SludgeMLDFTNPILWLLGIPAIGVLLFLLAGHFNAEARERRRRMRSHRPVVSRKPGPTVKFAVHTGKSKSR
Ga0209746_105485023300025716Arctic Peat SoilMFNIGNPVLWIIGVPALGVLLFLLHGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKRDRKL
Ga0209584_1004562523300025878Arctic Peat SoilMLDARNPVVWLIGIIAFAVALTFLRGYFTAGARARRRLDKSHRPVISRKQGPTVRLAVDVDKPKRDRKR
Ga0209584_1035585213300025878Arctic Peat SoilMFAAGNPVVWLIGIIVLGIVFFLLRGYFSAEARARRRREKSHRRVVSWKQGPIVRLAVDADKPKRDCKR
Ga0209540_1053550113300025888Arctic Peat SoilNPILWIIGVPALGVLLFLLHGHFSAETRERRRGQSHRPVISQNHGPTVRSAVDVDKPKGDRKR
Ga0209397_1023682333300027871WetlandHDMGNPVPWLMGVFASGIVFFLLRGHFSAEARARRRRERSNQPVISRKQDPTVKLAVNAGKTKGDRKR
Ga0209450_1025860713300027885Freshwater Lake SedimentMFALGNPTFWLIGILALAVVLFLLRSRFRAETRDRRRREKSHRPVISRKQGPTVKLAVKVDKEKRDRQL
Ga0209777_1003016273300027896Freshwater Lake SedimentMFDIGNSILWIIGVPALAVLLFLLRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRKR
Ga0209253_1096095523300027900Freshwater Lake SedimentMFDIGNSILWIIGVPALAVLLFLVRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRKR
Ga0265337_100223253300028556RhizosphereMFAIGNPILWIIGVPALGVLLFLLRGHFSAETRERRRGQSHRPVISQNHGPTVRSAVDVDKPKGDRKR
Ga0265326_1022440723300028558RhizosphereILTMFAIGNPILLIIGVPALGVLLFLLRGHFSAETRERRRGQSHRPVISQNHGPTVRSAVDVDKPKGDRKR
Ga0247275_110762423300029817SoilMLDARNPVVWLIGIIVFAVAFFFLRGHFTAEARARRRLEKSHRPVISRKQGPTVRLAV
Ga0311337_1121334413300030000FenMFTIENPFLWLIGVPALGVLLFLLRGHFSAETRARRRRGQSHRPVISQKHDPTVRSAVNADKPKG
Ga0302323_10194960323300031232FenMLTMLDARNPVVWLIGILAFAVAMAFVRGYFTSEARARWRLDKSHRLVISRKHGPTVRLAVDVDKPKRDCKR
Ga0315290_1168640323300031834SedimentMFDIGNSILWIIGVPALAVLLFLVRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKP
Ga0315297_1022665923300031873SedimentMFDIGNSILWIIGVPALAVLLFLLRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRKP
Ga0302322_10007335743300031902FenMLGISNAILWLFGVLALGVVLFLVRGHLTAEARARRRREKSNRPVVSRKPGPTVRLAVDVDKAKRDRKR
Ga0302322_10055035523300031902FenMFTLENSILLIIGVPALGVLLFWLVNHFRAEARARRRRGESHRPVVSQNHGPPLRAAAGKPKHDHKR
Ga0306921_1023865523300031912SoilMLVRNLILWLIGAIVLAVLLFLARGYFSAETRTRRRRDRSHRPVTSRKSGPSVRLAVDVDKPKRGRKG
Ga0315278_1087944223300031997SedimentMYDIGNPILWIIGVPALGVLLFLLRGHFSAETRERRRRGKSHRPVISRKQGPTVRLAVDVDKPKRDRKR
Ga0315295_1050291423300032156SedimentMLDLGNPIVWLLGVIALALGLFCVRGHFSAEARARRRRERSNRPAISRKKGPTVKLAANVGKPKGDRKR
Ga0315295_1074157923300032156SedimentMLDARNPVLRLIALIAFAVAFVWLRGYFSEEARGRRRRAKSHRPLVSRKHGPTVRLAVKGAKPKRGRKE
Ga0311301_1070991623300032160Peatlands SoilMFTIENPFLWLIGVPALGFLLFLLRGHFSADTRERRRGESHRPVIAQKHGPTVRSALHVDKPKRDRKR
Ga0315283_1218132923300032164SedimentRVERVRISKIPIEILTMFDIGNSILWIIGVPALAVLLFLVRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRKG
Ga0315276_1114044233300032177SedimentMLDIRNPLFWLVIVVVLVAVLSLVRSHFSAEARERRRREKSHRPVVSRKQGPTVKLAVDVGKPKRDRKG
Ga0315276_1153017423300032177SedimentMFDARNPAVWFVGIIAFAVALFLLRGHFSAEARARRRREKSHRPVSSRKQGPTVRLAVDVDKPKRDRKD
Ga0315271_1068371623300032256SedimentMLDARNPVVWLIGIIAPAVVFFLLRGHFTAEARARRRREKSNRPVVSRKQGPTVRLAVAVDKPKRVRKR
Ga0315270_1018405723300032275SedimentMFTIENPYLWVIGVPTLGVILFLLGNHFSVEKRARRRRGQSHRPVISRKHGPTVKFAVNTGKSERDRKH
Ga0315270_1089107013300032275SedimentLLIIGVPALGVLLFLLRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRK
Ga0315270_1105680323300032275SedimentMFDIGNSILWIIGVPALAVLLFLLRGHFSAETRDRRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRKG
Ga0315270_1120547513300032275SedimentMFTIENPYLWVVGIPALGVILFLLGSHFSAEKQARRRRGKSHRPVISRKHGPSVRLAVNAGKSERDRKR
Ga0315286_1035219823300032342SedimentMLDLRNPVPWLIGIIALGVMLFSMRRHLNPEARARRRREKSHRPVISRKQGPTVRLAVNVGKPERDRKS
Ga0315287_1134056213300032397SedimentLTMLDIRNPLFWLVIVVVLVAVLSLVRSHFSAEARERRRREKSHRPVVSRKQGPTVKLAVDVGKPKRDRKG
Ga0315287_1206452723300032397SedimentIRLERARVSPTPIDILTMLDLRNPVPWLLGIIALGVILFSVRRHFRPDELERRRRDKSHRRVISRKEGPTVRLAVNAGKPKRDRQG
Ga0315287_1276808913300032397SedimentMLENSNPILWLIGVLGLGLVLSLVRSHFSAEARARRRREKSHGQVISRKQGPNVKLAVDAGKPRRDRKG
Ga0315275_1002565233300032401SedimentMLDLRSPIPWLLGVIALGAVLFSVRRHFSPEARERRRREKSHRRVISRKHGPTVRLAVNVDKPKPDRKG
Ga0315275_1139605923300032401SedimentLIGIIAFALAVPLLRGYFTAGARERRRRDKSHGRVISRKPGPTVRLAVDVDKPKRDRKQ
Ga0315275_1154700613300032401SedimentLIMFDLRNPIPWLLGIIVLGVMLFSVRRHFSSEARERRRRDKSHRPVISRKQGPTVRLAVNVDKPKRDRKG
Ga0315273_1277770113300032516SedimentSILWIIGVPALAVLLFLLRGHFSAETRERRRRGKSHRPVISRKQGPTVKLAVNAGKPKGDRKG
Ga0335078_1002523743300032805SoilMTMAALTMLDAGNPVLWLIGFIVLTFVLFFLRGHLNAEARARRRLEKSHRPVISRKKGPTVRLAVEVEKPKRDRKRGRK
Ga0335071_1010364833300032897SoilMFDARNPVVWLSGMIVFAGALFLARRCFSPEARLRRRREKSNRRVISRKQGPTVRLAVDVDKPKPKRTR
Ga0326728_10001403113300033402Peat SoilMLGIRSPVQWVIGVIALAVVLFLLRGRFSAEARARRRREKSHRPVVSRKQHPTVKLAVNAGKPKGHGKS
Ga0326728_1000838223300033402Peat SoilMRDLGNPILWLIGVLALVIVLFLARGRFSAQTRVRRRRERSHRPVVSRKPGPTVRLAVDVDKPERDRER
Ga0326728_1002607823300033402Peat SoilMLDSRNSMVWLIGVLTLGIIFFLLRGRFNAETRARRRREKSNRPVISRKKDPTVKLAVNAGKPRGDRKG
Ga0326728_1016646613300033402Peat SoilMLDIKNPLVWLIGIVALAVLWVLLRGRFDPEARARRRRDRSNRPVISRKRGPSVRLAVDVDKPNRNQKK
Ga0326727_1042319013300033405Peat SoilDTLTMLGIRSPVQWVIGVIALAVVLFLLRGRFSAEARARRRREKSHRPVVSRKQRPTVKLAVNAGKPKGHGKS
Ga0326727_1076391913300033405Peat SoilMLCISNSILWPIGVLAVAIVLFLGRGHFTAEARARRRREKSNRPVVSRKQGPTVKLAVNAGHPKRDHKR
Ga0316619_1017902333300033414SoilMGNPVPWLIGVFAFGIVFFLLRGRFSAEARARRRRERSNRPVISRKQGPTVKLAVNAGKTKGDRKR
Ga0316622_10109964133300033416SoilVRLVGVLALGSAFFLLRERFGAEAARARRGRERSHRPVASRKQGPTVKLALSAGKPEGDRNR
Ga0316622_10325995023300033416SoilAVEILTMFDIGNPILWIVGVPALGVLLFLLRGHFSAETRARRRRGQSYRPVISRKRGPTVKLAVKVDKPKRNQKD
Ga0316625_10211399523300033418SoilMLNIRNPILWLIGAIVLGLVLVLLRGHFSAEARERRRRDRSHRPVSSRKQGPTVKLAVNVGKPKGDQKR
Ga0316625_10239359313300033418SoilISKVPIEILTMFTIENPILWIIGLPALGVLLFLLRGHFSAEKRERRRRGRSHRPVISRKQGPTVKLAVNAGKPKGDRKR
Ga0326726_1093666923300033433Peat SoilMLENSNPILWLIGVLGLGLVLSLVRSHFSAEARARRRREKSHGQVISRKQGPNVKLAVDAGKPRRDRKS
Ga0316620_1013921133300033480SoilMFDIGNPILWIIGVPALGVLLFLLRGHFSAETRERRRRGESHRPVISQKHGPTVRSAVDVDKPKRDRKR
Ga0316620_1193204623300033480SoilMLDARNPVLWLIGLIAFAVAFLLLRGYCSGEARGRRRRAKSHRPVVSRRQGPTVRLAVDVGKPKRDRKE
Ga0316620_1243103323300033480SoilRARISATPIEIPTMFDLRNPIVWLSGVIALATVFFFLLRERFSAEARARRRREKSNRPVVSRKQGPTVRLAVDVDKPKRDRKR
Ga0316627_10222095613300033482SoilMEKWDGRRAASALPPKGAILSASMLDRGNSVLWLIRVLAFGAVLLLARSHFTAEARERRRHEKSHRRGLSRKQGPTVRLVVDVGKPKRDRKRFER
Ga0316629_1009131253300033483SoilMGNPVPWLIGVFAFGMVFFLLRGRFSAEARARRRRERSNRPVISRKQGPTVKLAVNAGKTKGDRKR
Ga0316626_1028056543300033485SoilMFDIGNPILWIIGVPALGVLLFLLRGHFSAESRERRRRGQSHRPVISQKHGPTVRSAVDVDKPKRDRKR
Ga0316626_1197287323300033485SoilMLDIRNPVPSLLGIIALGAVFLLARRHFSPEARARRRRDKSHRPVISRKQGPTVRLAVNVDESKGDRKG
Ga0316630_1115122413300033487SoilIKILTMLDTSNPILWLIGVIALAVVLFLLRRHFSTEARARRRRDKSNRPVISRKQGPSVRLAVDVDKPKRYRKR
Ga0316630_1124973113300033487SoilAILSASMLGRGNSVLWLIRVLAFGAVLLLARSHFTAEARERRRREKSHRRVLSRKQGPTVRLAVDVGKPKRDRKRFDR
Ga0316621_1035331523300033488SoilMGNPVPWLMGVFASGIVFFLLRGHFSAEARARRRCERSNRPVISRKQGPTVKLAVNAGKTKGDRKR
Ga0316628_10051039433300033513SoilMLDIKNPIFWLIGLPALGLALFLVRNRFSAETRERRRRDKSHRPVISRKPGPTVKLAVNVEKQKRDRAS
Ga0316628_10210341723300033513SoilMFDIGNPILWIIGVPALGVLLFLLRGHFSAESRERRRRGQSHRPVISQKHGPTVRSAVDVGKPNGDRKR
Ga0316628_10343815613300033513SoilIGVPALGVLLFLLRGHFSAETRERRRRGESHRPVISRKDGPTVRSAVDVDKPKRDQKR
Ga0316628_10408401613300033513SoilMLDIRNPVPSLLGIIALGAVFLLARRHFSPEARARRRRDKSHRPVISRKQGPTVRLAVDVDESKGDRKG
Ga0316616_10122607323300033521SoilMGVFASGIVFFLLRGHFSAEARARRRRERSNRPVISRKQGPTVKLAVNAGKTKGDRKR
Ga0316616_10192718023300033521SoilKILTMLDISNPILWLIGVIALAVVLFLLRRHFSTEARARRRREKSNRPVISRKQGPTVRLAVDVGKPKRDRKR
Ga0316616_10318502113300033521SoilMSDIGNPILWIIGVPALGVLLFLLRGHFSAETRARRRRGESHRPVMSPKHGPTVRSAVDVDKP
Ga0316617_10143050413300033557SoilMEKWDGRRAASALPPKGAILSASMLGRGNSVLWLIGVLAFGAVLLLARSHFTAEGRERRRHEKSHRRVLSRKQGPTVRLAVDVGKPKRDRKRFDR
Ga0316617_10178155123300033557SoilPELLLPSSLNVQSQHDMGNPVPWLIGVFAFGIVFFLLRGRFSAEARARRRRERSNQPVISRKQGPTVKLAVNAGKTKGDRKR
Ga0371489_0137479_830_10393300033755Peat SoilMLGIRSPVQWVIGVIALAVVLFLLRGRFSAEARARRRREKSHRPVVSRKQRPTVKLAVNAGKPKGHGKS
Ga0334837_002355_5784_59483300033823SoilMLTMLEARNPVVWVIGIIAFAVARARRRLDKSHRPVISRKQGPTVQLAVHVDKP
Ga0370507_0294660_332_5323300034158Untreated Peat SoilMGNPVPWLIGVFAFGIVFFLLRGRFSAEARARRRRERSNRPVISRKPGPTVKLAVNAGKTKGDRKR
Ga0370480_0013563_1487_16963300034169Untreated Peat SoilMLNARNPILWFIGVVVLAFVLFLARAYFSPDARAGRRREKSHRRVVSRKHGPTVRLAVDVDKLKRDRKG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.