NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F036991

Metagenome / Metatranscriptome Family F036991

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036991
Family Type Metagenome / Metatranscriptome
Number of Sequences 169
Average Sequence Length 41 residues
Representative Sequence MSVARDMSGIVAHDLSGLEWSPMEVTDETDRDATGDPEDAI
Number of Associated Samples 126
Number of Associated Scaffolds 169

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 30.00 %
% of genes near scaffold ends (potentially truncated) 70.41 %
% of genes from short scaffolds (< 2000 bps) 76.92 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.373 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(10.059 % of family members)
Environment Ontology (ENVO) Unclassified
(22.485 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(40.237 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 169 Family Scaffolds
PF13551HTH_29 29.59
PF13518HTH_28 11.83
PF13384HTH_23 8.28
PF00582Usp 2.37
PF00166Cpn10 1.78
PF04014MazE_antitoxin 1.78
PF00294PfkB 1.18
PF05016ParE_toxin 1.18
PF01475FUR 1.18
PF00753Lactamase_B 1.18
PF03841SelA 0.59
PF12838Fer4_7 0.59
PF01053Cys_Met_Meta_PP 0.59
PF01547SBP_bac_1 0.59
PF02535Zip 0.59
PF13541ChlI 0.59
PF11136DUF2889 0.59
PF13361UvrD_C 0.59
PF04002RadC 0.59
PF04989CmcI 0.59
PF01548DEDD_Tnp_IS110 0.59
PF02353CMAS 0.59
PF02861Clp_N 0.59
PF02146SIR2 0.59
PF16561AMPK1_CBM 0.59
PF00009GTP_EFTU 0.59
PF07963N_methyl 0.59
PF03683UPF0175 0.59
PF13524Glyco_trans_1_2 0.59
PF07549Sec_GG 0.59
PF09722Xre_MbcA_ParS_C 0.59
PF09419PGP_phosphatase 0.59
PF13458Peripla_BP_6 0.59
PF01177Asp_Glu_race 0.59
PF00581Rhodanese 0.59
PF05683Fumerase_C 0.59
PF10609ParA 0.59
PF00118Cpn60_TCP1 0.59
PF00535Glycos_transf_2 0.59
PF13624SurA_N_3 0.59
PF09827CRISPR_Cas2 0.59
PF04286DUF445 0.59
PF04191PEMT 0.59
PF08388GIIM 0.59
PF02371Transposase_20 0.59
PF02666PS_Dcarbxylase 0.59
PF04264YceI 0.59
PF01936NYN 0.59
PF03992ABM 0.59
PF00589Phage_integrase 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 169 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 1.78
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 1.18
COG3547TransposaseMobilome: prophages, transposons [X] 1.18
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 1.18
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.59
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.59
COG2003DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motifReplication, recombination and repair [L] 0.59
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 0.59
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.59
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.59
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 0.59
COG1838Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domainEnergy production and conversion [C] 0.59
COG2733Uncharacterized membrane-anchored protein YjiN, DUF445 familyFunction unknown [S] 0.59
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.59
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 0.59
COG3510Cephalosporin hydroxylaseDefense mechanisms [V] 0.59
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 0.59
COG4399Uncharacterized membrane protein YheB, UPF0754 familyFunction unknown [S] 0.59
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 0.59
COG1432NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturationGeneral function prediction only [R] 0.59
COG0846NAD-dependent protein deacetylase, SIR2 familyPosttranslational modification, protein turnover, chaperones [O] 0.59
COG0688Phosphatidylserine decarboxylaseLipid transport and metabolism [I] 0.59
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.59
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 0.59
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.59
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.59
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.59
COG0428Zinc transporter ZupTInorganic ion transport and metabolism [P] 0.59
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.59
COG0342Preprotein translocase subunit SecDIntracellular trafficking, secretion, and vesicular transport [U] 0.59
COG0341Preprotein translocase subunit SecFIntracellular trafficking, secretion, and vesicular transport [U] 0.59
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.59


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.74 %
UnclassifiedrootN/A24.26 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908028|beta3_all_NODE_16084_len_921_cov_21_985886Not Available971Open in IMG/M
2124908028|beta3_all_NODE_217433_len_1607_cov_14_504045All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter1657Open in IMG/M
2124908037|B3_GZBA_v_NODE_6702_len_1326_cov_15_801660All Organisms → cellular organisms → Bacteria1376Open in IMG/M
2140918024|NODE_432073_length_1718_cov_15.873108All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300000032|Draft_c0021311All Organisms → cellular organisms → Bacteria4153Open in IMG/M
3300000229|TB_LI09_3DRAFT_1027296All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1451Open in IMG/M
3300000568|Draft_10031021All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300000568|Draft_10049487Not Available775Open in IMG/M
3300000568|Draft_10165509Not Available688Open in IMG/M
3300001213|JGIcombinedJ13530_106350594All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin095583Open in IMG/M
3300001380|JGI1356J14229_10004780All Organisms → cellular organisms → Bacteria → Proteobacteria10038Open in IMG/M
3300001380|JGI1356J14229_10051240All Organisms → cellular organisms → Bacteria2074Open in IMG/M
3300001410|JGI20179J14886_1003171All Organisms → cellular organisms → Bacteria1456Open in IMG/M
3300001428|JGI20201J14949_1007296All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300001453|JGI20197J15136_1005294All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300002183|JGI24145J26757_10024711All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300002446|NAPDCCLC_10039677All Organisms → cellular organisms → Bacteria → Proteobacteria2213Open in IMG/M
3300002538|JGI24132J36420_10042528All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300002569|JGI24136J36422_10089134Not Available847Open in IMG/M
3300002961|JGI11641J44799_10041595All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300003154|Ga0052186_10091463All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → Candidatus Gallionella acididurans662Open in IMG/M
3300003852|Ga0031655_10077499All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300003852|Ga0031655_10152997All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300003852|Ga0031655_10369065All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria534Open in IMG/M
3300003987|Ga0055471_10231661Not Available583Open in IMG/M
3300004212|Ga0066631_10183728All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter luteus964Open in IMG/M
3300004238|Ga0066635_10401695All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia caeni601Open in IMG/M
3300004775|Ga0007798_10020837All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1469Open in IMG/M
3300005216|Ga0068994_10014852All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300005898|Ga0075276_10018661All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1451Open in IMG/M
3300006864|Ga0066797_1202462All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → Candidatus Gallionella acididurans693Open in IMG/M
3300006950|Ga0075524_10059222All Organisms → cellular organisms → Bacteria → Proteobacteria1598Open in IMG/M
3300009039|Ga0105152_10127621Not Available1038Open in IMG/M
3300009039|Ga0105152_10134208Not Available1012Open in IMG/M
3300009039|Ga0105152_10188791Not Available847Open in IMG/M
3300009039|Ga0105152_10209178All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300009039|Ga0105152_10351081All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Desulfobacillus → Candidatus Desulfobacillus denitrificans618Open in IMG/M
3300009039|Ga0105152_10366310Not Available605Open in IMG/M
3300009039|Ga0105152_10384992All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria590Open in IMG/M
3300009091|Ga0102851_10198986All Organisms → cellular organisms → Bacteria → Proteobacteria1876Open in IMG/M
3300009131|Ga0115027_11760176Not Available517Open in IMG/M
3300009167|Ga0113563_11426744All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300009168|Ga0105104_10473128All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Desulfobacillus → Candidatus Desulfobacillus denitrificans703Open in IMG/M
3300009502|Ga0114951_10089933All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300009518|Ga0116128_1071373Not Available1060Open in IMG/M
3300009538|Ga0129287_10098106Not Available1242Open in IMG/M
3300009667|Ga0116147_1200721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Desulfobacillus → Candidatus Desulfobacillus denitrificans781Open in IMG/M
3300009692|Ga0116171_10064484All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2312Open in IMG/M
3300010351|Ga0116248_10209765All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Desulfobacillus → Candidatus Desulfobacillus denitrificans1585Open in IMG/M
3300010353|Ga0116236_10273158All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Desulfobacillus → Candidatus Desulfobacillus denitrificans1489Open in IMG/M
3300010357|Ga0116249_11969868All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300011007|Ga0139299_1125163All Organisms → cellular organisms → Bacteria2635Open in IMG/M
3300013086|Ga0163202_1004183All Organisms → cellular organisms → Bacteria2717Open in IMG/M
3300013086|Ga0163202_1020664All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300013086|Ga0163202_1061839All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Firestonebacteria → Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67757Open in IMG/M
3300013086|Ga0163202_1135697All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria536Open in IMG/M
3300013088|Ga0163200_1031313All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus1609Open in IMG/M
3300013088|Ga0163200_1157352Not Available701Open in IMG/M
3300013092|Ga0163199_1112517All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1134Open in IMG/M
(restricted) 3300013126|Ga0172367_10001721All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales31100Open in IMG/M
3300014158|Ga0181521_10132771Not Available1462Open in IMG/M
3300014206|Ga0172377_11333629All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria541Open in IMG/M
3300014257|Ga0075319_1063938Not Available687Open in IMG/M
3300014502|Ga0182021_10695777All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae1219Open in IMG/M
3300014502|Ga0182021_12641643All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria604Open in IMG/M
3300015370|Ga0180009_10107908All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1439Open in IMG/M
3300017929|Ga0187849_1000340All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria65388Open in IMG/M
3300017929|Ga0187849_1000738All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria41101Open in IMG/M
3300017929|Ga0187849_1002513All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini → Syntrophus17398Open in IMG/M
3300017931|Ga0187877_1095591All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini → Syntrophus1248Open in IMG/M
3300017941|Ga0187850_10147906Not Available1103Open in IMG/M
3300017941|Ga0187850_10353868All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300017998|Ga0187870_1001727All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria19188Open in IMG/M
3300017998|Ga0187870_1305176All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300018004|Ga0187865_1004334All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria10663Open in IMG/M
3300018025|Ga0187885_10331197All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300018057|Ga0187858_10100062All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae1981Open in IMG/M
3300020171|Ga0180732_1049822All Organisms → cellular organisms → Bacteria1381Open in IMG/M
3300020812|Ga0214071_1156855All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300020814|Ga0214088_1194437Not Available869Open in IMG/M
3300022553|Ga0212124_10123770All Organisms → cellular organisms → Bacteria1438Open in IMG/M
3300022553|Ga0212124_10141704All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300022553|Ga0212124_10579024All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria582Open in IMG/M
3300022653|Ga0236337_1135189All Organisms → cellular organisms → Bacteria → Proteobacteria1257Open in IMG/M
3300025111|Ga0208968_1108868All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria835Open in IMG/M
3300025285|Ga0208046_1019485All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300025306|Ga0208045_1019299All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300025307|Ga0208566_1033666All Organisms → cellular organisms → Bacteria → Proteobacteria1804Open in IMG/M
3300025499|Ga0207931_1015526All Organisms → cellular organisms → Bacteria → Proteobacteria1779Open in IMG/M
3300025499|Ga0207931_1086896All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300025533|Ga0208584_1008563All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini → Syntrophus2697Open in IMG/M
3300025548|Ga0208716_1004780All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → Prolixibacter4129Open in IMG/M
3300025567|Ga0210076_1040473Not Available1004Open in IMG/M
3300025582|Ga0209386_1075508All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria598Open in IMG/M
3300025716|Ga0209746_1189833Not Available552Open in IMG/M
3300025812|Ga0208457_1025938All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300025836|Ga0209748_1250077All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium584Open in IMG/M
3300025843|Ga0209182_10127722All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia → Curculionoidea → Curculionidae → Entiminae → Celeuthetini → Syntrophus714Open in IMG/M
3300025846|Ga0209538_1334612All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria523Open in IMG/M
3300025858|Ga0209099_1088542All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300025888|Ga0209540_10136942All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300026034|Ga0208773_1010006All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1248Open in IMG/M
3300027667|Ga0209009_1068272Not Available893Open in IMG/M
3300027693|Ga0209704_1111263All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300027743|Ga0209593_10205238All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Desulfobacillus → Candidatus Desulfobacillus denitrificans694Open in IMG/M
3300027819|Ga0209514_10000222All Organisms → cellular organisms → Bacteria → Proteobacteria127858Open in IMG/M
3300027819|Ga0209514_10021783All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria5639Open in IMG/M
3300027819|Ga0209514_10058572All Organisms → cellular organisms → Bacteria2587Open in IMG/M
3300027819|Ga0209514_10134475All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300027819|Ga0209514_10175071All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300027871|Ga0209397_10704930All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria507Open in IMG/M
3300027896|Ga0209777_10063693All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae3269Open in IMG/M
3300027896|Ga0209777_10154072All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1892Open in IMG/M
3300027896|Ga0209777_10669567All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin095742Open in IMG/M
3300028028|Ga0265292_1048215All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300028032|Ga0265296_1001746All Organisms → cellular organisms → Bacteria → Proteobacteria23752Open in IMG/M
3300028032|Ga0265296_1324583Not Available500Open in IMG/M
3300028176|Ga0268284_1018816All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2090Open in IMG/M
3300028176|Ga0268284_1019004All Organisms → cellular organisms → Bacteria2078Open in IMG/M
3300028283|Ga0268283_1135581Not Available695Open in IMG/M
3300028298|Ga0268280_1011137All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3200Open in IMG/M
3300028298|Ga0268280_1037301All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300028622|Ga0302253_1001907All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans11325Open in IMG/M
3300028622|Ga0302253_1023863All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1318Open in IMG/M
(restricted) 3300029286|Ga0247841_10093924All Organisms → cellular organisms → Bacteria → Proteobacteria2505Open in IMG/M
(restricted) 3300029286|Ga0247841_10202811All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1456Open in IMG/M
3300029601|Ga0307371_137219All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria552Open in IMG/M
3300030616|Ga0272442_10053775All Organisms → cellular organisms → Bacteria3966Open in IMG/M
3300031707|Ga0315291_11238352All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S3730MH5607Open in IMG/M
3300031746|Ga0315293_10290589All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300031772|Ga0315288_10131130All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2817Open in IMG/M
3300031772|Ga0315288_11459876All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300031834|Ga0315290_10298645All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300031873|Ga0315297_10019806All Organisms → cellular organisms → Bacteria → Proteobacteria4788Open in IMG/M
3300031885|Ga0315285_10156957All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300031949|Ga0214473_11581882All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300031997|Ga0315278_10229561All Organisms → cellular organisms → Bacteria1914Open in IMG/M
3300032046|Ga0315289_10006890All Organisms → cellular organisms → Bacteria16651Open in IMG/M
3300032118|Ga0315277_10402570All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300032173|Ga0315268_12696469All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300032177|Ga0315276_10388460All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1493Open in IMG/M
3300032177|Ga0315276_11766513Not Available637Open in IMG/M
3300032516|Ga0315273_11723153All Organisms → cellular organisms → Bacteria → Proteobacteria758Open in IMG/M
3300033233|Ga0334722_11102445All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300033408|Ga0316605_10369011All Organisms → cellular organisms → Bacteria → Proteobacteria1285Open in IMG/M
3300033418|Ga0316625_102615868All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300033433|Ga0326726_12078976All Organisms → cellular organisms → Bacteria → Proteobacteria553Open in IMG/M
3300033482|Ga0316627_101935536All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300033486|Ga0316624_10004143All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae6507Open in IMG/M
3300033486|Ga0316624_10576502Not Available975Open in IMG/M
3300033488|Ga0316621_10246994Not Available1143Open in IMG/M
3300033488|Ga0316621_10350541Not Available989Open in IMG/M
3300033513|Ga0316628_100303859Not Available1985Open in IMG/M
3300033521|Ga0316616_100381834All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300033557|Ga0316617_101076463Not Available791Open in IMG/M
3300033557|Ga0316617_101290834Not Available728Open in IMG/M
3300033827|Ga0334848_077016All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300034123|Ga0370479_0029417Not Available1314Open in IMG/M
3300034158|Ga0370507_0158907Not Available723Open in IMG/M
3300034169|Ga0370480_0171442Not Available739Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.06%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.47%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil9.47%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland8.28%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.51%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge5.92%
Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment4.73%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater4.14%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment3.55%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water2.96%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater2.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil2.37%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.78%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.78%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.78%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments1.78%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.18%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.18%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.18%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.18%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.18%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.18%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.18%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.18%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate1.18%
Activated SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge1.18%
Hydrocarbon Resource EnvironmentsEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments1.18%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.59%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.59%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.59%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater0.59%
Basal IceEnvironmental → Aquatic → Freshwater → Ice → Glacier → Basal Ice0.59%
Marine SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment0.59%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.59%
Beach Aquifer PorewaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater0.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.59%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.59%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.59%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.59%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.59%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.59%
Anaerobic Digester DigestateEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate0.59%
Granular SludgeEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge0.59%
BioreactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Bioreactor0.59%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908028Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2124908037Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2140918024Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
3300000032Oil sands microbial community from Northern Alberta which degrade NaphthalineEngineeredOpen in IMG/M
3300000229Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_3EnvironmentalOpen in IMG/M
3300000568Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:EngineeredOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001380Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 mEnvironmentalOpen in IMG/M
3300001410Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012EnvironmentalOpen in IMG/M
3300001428Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012EnvironmentalOpen in IMG/M
3300001453Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012EnvironmentalOpen in IMG/M
3300002183Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22AEnvironmentalOpen in IMG/M
3300002446Oil sands microbial community from Northern Alberta which degrade NaphthalineEngineeredOpen in IMG/M
3300002538Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212EnvironmentalOpen in IMG/M
3300002569Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212EnvironmentalOpen in IMG/M
3300002961Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300003154Anode biofilm microbial communities from J. Craig Venter Institute, USA, in microbial fuel cellsEngineeredOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300004212Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00EnvironmentalOpen in IMG/M
3300004238Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00EnvironmentalOpen in IMG/M
3300004775Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17MEnvironmentalOpen in IMG/M
3300005216Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2EnvironmentalOpen in IMG/M
3300005831Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBMEnvironmentalOpen in IMG/M
3300005898Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300009039Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cmEnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009538Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2WEnvironmentalOpen in IMG/M
3300009667Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaGEngineeredOpen in IMG/M
3300009692Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaGEngineeredOpen in IMG/M
3300009772Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC105_MetaGEngineeredOpen in IMG/M
3300010351AD_USPNcaEngineeredOpen in IMG/M
3300010353AD_USCAcaEngineeredOpen in IMG/M
3300010357AD_USSTcaEngineeredOpen in IMG/M
3300011007Basal ice microbial communities from Matanuska glacier, Alaska, USA - MataBEnvironmentalOpen in IMG/M
3300013086Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300mEnvironmentalOpen in IMG/M
3300013088Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200mEnvironmentalOpen in IMG/M
3300013092Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150mEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014206Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaGEngineeredOpen in IMG/M
3300014257Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015370Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaGEnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300020171Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaGEnvironmentalOpen in IMG/M
3300020812Anaerobic digester digestate microbial community, University of Toronto, Ontario, Canada - DG074 megahitEngineeredOpen in IMG/M
3300020814Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahitEngineeredOpen in IMG/M
3300022553Powell_combined assemblyEnvironmentalOpen in IMG/M
3300022653Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1EnvironmentalOpen in IMG/M
3300025111Groundwater microbial communities from Rifle, Colorado - Rifle Oxygen_injection A3 (SPAdes)EnvironmentalOpen in IMG/M
3300025285Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m (SPAdes)EnvironmentalOpen in IMG/M
3300025306Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m (SPAdes)EnvironmentalOpen in IMG/M
3300025307Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m (SPAdes)EnvironmentalOpen in IMG/M
3300025499Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025533Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025548Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025582Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)EnvironmentalOpen in IMG/M
3300025702Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC109_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025716Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025812Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025836Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025843Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)EnvironmentalOpen in IMG/M
3300025846Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025858Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300026034Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300028028Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 296AEngineeredOpen in IMG/M
3300028032Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1EnvironmentalOpen in IMG/M
3300028176Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_40mEnvironmentalOpen in IMG/M
3300028283Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_36mEnvironmentalOpen in IMG/M
3300028298Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_40mEnvironmentalOpen in IMG/M
3300028622Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_RA_TrpEngineeredOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300029601Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_RA_Trp2 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300030616Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Form-2OEnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031885Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033827Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9EnvironmentalOpen in IMG/M
3300034123Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15EnvironmentalOpen in IMG/M
3300034158Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18EnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
beta3_all_011267702124908028SoilRMYGNLLEASKLSGFVAHKLSGLLWSPMEVTDETDGVVTGDPEDAI
beta3_all_013718602124908028SoilGASKLSGFVAHNLSGLLWSPLEVMDETDGDATGDPEDAI
B3_GZBA_v_002753402124908037SoilSEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPGDAI
B_all_v_003176802140918024SoilLSGASKLSGFVAHNLSGLLWSPLEVMDETDGDATGDPEDAI
Draft_002131123300000032Hydrocarbon Resource EnvironmentsMSSTKKLSLLGARKLSGFVAHDLSGLLRSPLEVTDEADGDATGDPEDAI*
TB_LI09_3DRAFT_102729623300000229GroundwaterLSVTRDMSGFVAHDLSGLLWSPKEVTDETGRDATGDPENAI*
Draft_1003102123300000568Hydrocarbon Resource EnvironmentsLSITRDMSGFVTHDLSGIRYSLMEVADATDKDATGDPEDVI*
Draft_1004948723300000568Hydrocarbon Resource EnvironmentsPVRQRDMNTMSVTHDMSGFVAHDMSGLLWSPLEVTGEADRDATGDSEDAI*
Draft_1016550923300000568Hydrocarbon Resource EnvironmentsMVSVTHDMSGFVAHDMSGLLWSPLEVTGEADRDATGDSEDAI*
JGIcombinedJ13530_10635059413300001213WetlandMSRARKLSSIVARKLSGLLWSRMEVTDETDGDATGDPKDVI*
JGI1356J14229_1000478053300001380GroundwaterMLGARKLSGIVAHNLSGLRCRLEVTDEADRMATGDQEDAI*
JGI1356J14229_1005124043300001380GroundwaterMVKVNRHVLLGASKLSGIVAHYLSGLRCHEEVTNETVRIA
JGI20179J14886_100317123300001410Arctic Peat SoilLSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI*
JGI20201J14949_100729623300001428Arctic Peat SoilVSEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPGDAI*
JGI20197J15136_100529423300001453Arctic Peat SoilRYLCQGKIDCLSEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPGDAI*
JGI24145J26757_1002471113300002183Arctic Peat SoilRMSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI*
NAPDCCLC_1003967713300002446Hydrocarbon Resource EnvironmentsMSVTHDMSGLVAHHMSGFIWSPLEVINGTDRIATGDPEDAFE
JGI24132J36420_1004252813300002538Arctic Peat SoilMVQMSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI*
JGI24136J36422_1008913413300002569Arctic Peat SoilMSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI*
JGI11641J44799_1004159523300002961WetlandLLRAHDMSGFVAHDLSGLGWSPMEVTDETDGVXTGDPEDEI*
Ga0052186_1009146313300003154BioreactorVSRAHDMSCYVAHKLSGFIRSLMEVIDETDRDATGDPEDAI*
Ga0031655_1007749923300003852Freshwater Lake SedimentVSEASNMSGIVARNLSGLIWSPMEVADETDRDVTGAPEDAI*
Ga0031655_1015299723300003852Freshwater Lake SedimentMSGARKLPGIVAHNLSGLLWSPLEMTDETDGDVTGDPGDAI*
Ga0031655_1036906523300003852Freshwater Lake SedimentDCQSLFDIMLLTRDMSGFIARDLSGLLRSPMEVTDEADGGATGEPGDAI*
Ga0055471_1023166123300003987Natural And Restored WetlandsSVASNMSGFVAHDLSGLLKSSLEVTDETDGDATGDPEDAI*
Ga0066631_1018372813300004212GroundwaterVSGARDMSGFVARNLSGLEWSPMEVTNEADRDATGDTEDAI*
Ga0066635_1040169513300004238GroundwaterMIVKANHQVSGARDMSGFVARNLSGLEWSPMEVTNEADRDATGDTEDAFEG
Ga0007798_1002083713300004775FreshwaterSLYQKSAQGAMIIIFLSEASKLSGFVAHNLSGLLRSPMEVTDETDRDATGDPEDAI*
Ga0068994_1001485223300005216Natural And Restored WetlandsSEASKLSCIVAHKLSGLLWSPLEVTDETDRAITGAIEDAI*
Ga0074471_1074094523300005831Sediment (Intertidal)IYHFVSVTSKLSGVVTSKLSGLRFHLEVRDEADRDTTGDPEDAI*
Ga0075276_1001866113300005898Rice Paddy SoilQGLILLLSVASNMSGFVAHDLSGLLKSSLEVTDETDGDATGDPEDAI*
Ga0066797_120246213300006864SoilNDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI*
Ga0075524_1005922233300006950Arctic Peat SoilSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI*
Ga0105152_1012762123300009039Lake SedimentDMSGIVAHNLSGLGWSPLEVTDETDGDATGEPEDAI*
Ga0105152_1013420823300009039Lake SedimentMLVTNDMSGIVAHNLSGLGWSPLEVTDEMDRDATGDPEDAI*
Ga0105152_1018879133300009039Lake SedimentMSVTNDMSGIVAHNLSGLVWSLLEVADEMDRDATGDPEDAIRGDVFWME*
Ga0105152_1020917823300009039Lake SedimentVSVAHDMSGFVAHDLSGLRWSPMEVTDETDRDATG
Ga0105152_1035108123300009039Lake SedimentLVAHDMSGFVAHDLSGLRWSPVEVTDETDGDTTGEPEDAI*
Ga0105152_1036631023300009039Lake SedimentMLEASNMSGIVARNLSGLIWSPMEVADETDRDVTGDPEDAI*
Ga0105152_1038499213300009039Lake SedimentMSGFVAHDLSGLRWSPMEVTDETDRDATGDPEDAI
Ga0102851_1019898623300009091Freshwater WetlandsMYVKLVEGKMLEARKVSGFVAHNLSGLLWSPLEVTDEADGDATGDPEDAI*
Ga0115027_1176017623300009131WetlandVSRVRDMSGFVARNLSGLLWSPLEVMDETDGDATGDPEDAI*
Ga0113563_1142674423300009167Freshwater WetlandsQGILFRLSGASKLSGFVAHNLSGLLWSPLEVTDETDGDTTGDPEDAI*
Ga0105104_1047312813300009168Freshwater SedimentHGANSVLGARKLSGFVAHDLSGLLRSPLEVTDEADGDATGDPENAI*
Ga0114951_1008993323300009502FreshwaterMSGIVAHNLSGLRCRREVTDEADRMAAGDPEDAI*
Ga0116128_107137323300009518PeatlandMLEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDAI*
Ga0129287_1009810623300009538Beach Aquifer PorewaterMSVARDMSGIVAHDLSGLEWSPMEVTDETDRDATGDPEDAI*
Ga0116147_120072123300009667Anaerobic Digestor SludgeSVTHDMSGFVAHHMSVFIRLPLEVIDGTDRDSTGDSEDAI*
Ga0116171_1006448423300009692Anaerobic Digestor SludgeVCQEDNSLLSVTRKLSGIVAHNLSGLDSHRMEVTDAMDRDATGDPEDAI*
Ga0116162_1044243213300009772Anaerobic Digestor SludgeLSETRVSVTRKLSGFVTRDLSGSGWPLLEVANETDKGVTGGLEDAI*
Ga0116248_1020976523300010351Anaerobic Digestor SludgeMSVTHDMSGFVAHHMSVFIRLPLEVIDGTDRDSTGDSGDAI*
Ga0116236_1027315813300010353Anaerobic Digestor SludgeGKGKIVEMSLTHDMSGFVAHHMSGLIRSPLEVIDGPDRIATGDTEDAI*
Ga0116236_1028636913300010353Anaerobic Digestor SludgeSVTRKLSGFVTRDLSGLGWPLLEVADETDRGVTGDPEDAI*
Ga0116249_1196986823300010357Anaerobic Digestor SludgeRCQISFSAMSVTHDMSGFVAHHMSVFIRLPLEVIDGTDRDSTGDSGDAI*
Ga0139299_112516323300011007Basal IceMSGIVAQHLSGLRCYQEVTDETDGDTTGDPEDAI*
Ga0163202_100418313300013086FreshwaterMSGIVAHDLSGLEWSPLEVTDETDRDATGDPEDAI
Ga0163202_102066413300013086FreshwaterMFFIGMSVARDMSGIVAHDLSGLEWSPLEVTDETDRDATGDPEDA
Ga0163202_106183913300013086FreshwaterMSGIVAHDLSGLDWSPLEVTDETDRDATGDPEDAI*
Ga0163202_113569713300013086FreshwaterFWDTSGANDMSGFVAHDLSGLLWSPSEVTDETDGDATGDPEDAI*
Ga0163200_103131313300013088FreshwaterMALSVTNDMSGFVAHNLSGLLWSPMEVTDETDGDTTGEPEDAI
Ga0163200_115735223300013088FreshwaterYVRFVAHNLSGLLWSPTEVTDETDGDATGDPEDAI*
Ga0163199_111251723300013092FreshwaterMGLDDFFLLVTNDMSGIVAQDLSGLGWSPLEVTDEMDRGATGDPEDAI*
(restricted) Ga0172367_10001721233300013126FreshwaterMSCFVAHNLSGLYCCQEVTSEPDTMATGDQAYEIQ
Ga0181521_1013277133300014158BogLLEARNMSGIVARNLSGLIWSPMEVPDETDRVDAGDPEDAI*
Ga0172377_1133362923300014206Landfill LeachateLLEARDMSGLVAHNLSGLRRGYREVTDETDRDTTGDSEDAI*
Ga0075319_106393823300014257Natural And Restored WetlandsMSVTRDMSGFVAHNLSGLGLSPLEVTDETDGDVTGDPEDAI*
Ga0182021_1069577713300014502FenMLEASKLSGFVAHKLSGLLWSPMGVTDDTDGVVTED
Ga0182021_1264164333300014502FenENPLMLEASKLSGFVAHKLSGLLWSPMEVTEETDGVVTGDPEDAI*
Ga0180009_1010790833300015370GroundwaterSVTNDMSGIVAHNLSGLGWSLLEVADEMDRDATGDPEDAIRGDVFWME*
Ga0187849_100034013300017929PeatlandMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDAI
Ga0187849_100073813300017929PeatlandVSEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDAI
Ga0187849_1002513173300017929PeatlandMLEASNLSGIVARNLSGLIWSPMEVSDETDRDVTGDPEDET
Ga0187849_107321033300017929PeatlandLQYLLSYLLEASNMSGIVARNLSGLIWSPMEVPDETDGDVT
Ga0187877_109559133300017931PeatlandVSEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDA
Ga0187853_1009256833300017940PeatlandLQYLLSYLLEASNMSGIVARNLSGLIWSPMEVPDE
Ga0187850_1014790623300017941PeatlandMLEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDAI
Ga0187850_1035386813300017941PeatlandLQYLLSYLLEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDA
Ga0187870_1001727213300017998PeatlandMSEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPE
Ga0187870_130517633300017998PeatlandVLEARNMSGIVARNMSGLIWSPMEVADETDRDVTGDPE
Ga0187865_1004334143300018004PeatlandVSEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPED
Ga0187873_130280123300018013PeatlandLQYLLSYLLEASNMSGIVARNLSGLIWSPMEVPDETDGDV
Ga0187885_1033119713300018025PeatlandLQYLLSYLLEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDP
Ga0187858_1010006243300018057PeatlandVSEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPE
Ga0180732_104982233300020171GroundwaterMFGIVAHNLSGLGWSPLEVTDEMDRDATGDPEDAI
Ga0214071_115685533300020812Anaerobic Digester DigestateSRAQDMSAFVAHKLSGLKWSLMEVTDALDRDATGDSEDAI
Ga0214088_119443713300020814Granular SludgeMSAFVAHKLSGLKWSLMEVTDALDRDATGDSEDAI
Ga0212124_1012377013300022553FreshwaterSLLGASMLSGIVAHNLSGLRCRQEVTDETDRMATGDPEDAI
Ga0212124_1014170413300022553FreshwaterMFFIGMSVARDMSGIVAHDLSGLEWSPLEVTDETDRDATGDPEDAI
Ga0212124_1057902413300022553FreshwaterYVRFVAHNLSGLLWSPTEVTDETDGDATGDPEDAI
Ga0236337_113518923300022653FreshwaterMSGIEARNLSGLIWSQLEVADETDGDVTGDPEDAI
Ga0208968_110886833300025111SoilMCFEKRQGENNXMLEASKLSGFIAHDLSGLIWSPMEVTDETDRVAAGDSEDAI
Ga0208046_101948523300025285FreshwaterMFFIGMSVARDMSGIVAHDLSGLEWSPLEVTDETDRD
Ga0208045_101929923300025306FreshwaterSNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPEDAI
Ga0208566_103366613300025307FreshwaterQHPFRFVLEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPEDAI
Ga0207931_101552623300025499Arctic Peat SoilVCQEDFGHMSEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPGDAI
Ga0207931_108689623300025499Arctic Peat SoilLSVANDMSGIVAHNLSGLLCSPLEVTDATDGDATGDPEDAI
Ga0208584_100856313300025533Arctic Peat SoilTRDMSSFVAHDLPGLRWSLMEVADATDRDAAGDTEDAI
Ga0208716_100478013300025548Arctic Peat SoilRSEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPGDAI
Ga0210076_104047323300025567Natural And Restored WetlandsKIVDMVSGASKLSGFVAHNLSGLIRSPMEVTDETDGDATGDPEDAI
Ga0209386_107550823300025582Arctic Peat SoilMSVDDMSVIRDLSGFVAHNLSGLLKPPQEVADAKDGDSTGDPEDAI
Ga0209203_114161313300025702Anaerobic Digestor SludgeINGLGRIVSVTRKLSGFVTRDLSGLGWPLLEVADETDRGVTGDPEDAI
Ga0209746_118983313300025716Arctic Peat SoilLSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDA
Ga0208457_102593823300025812PeatlandLSYLLEASNMSGIVARNLSGLIWSPMEVPDETDGDVTGDPEDAI
Ga0209748_125007723300025836Arctic Peat SoilMQHDAIISLSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI
Ga0209182_1012772213300025843Lake SedimentMSGFVAHDLSGLRWSPVEVTDETDGDTTGEPEDAI
Ga0209538_133461213300025846Arctic Peat SoilSSASVKGKSLSVSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI
Ga0209099_108854213300025858Anaerobic Digestor SludgeLLSRAHDMSAFVAHKLSGLKWSLMEVTDASDRDATGDTEDAI
Ga0209540_1013694223300025888Arctic Peat SoilGPIFSLSVANDMSGIVAHNLSGLLWSPLEVTDATDGDATGDPEDAI
Ga0208773_101000623300026034Rice Paddy SoilSNMSGFVAHDLSGLLKSSLEVTDETDGDATGDPEDAI
Ga0209009_106827213300027667Forest SoilRLSGFVAHNLSGLLRSQSEVTDETDGDATGDPEDAI
Ga0209704_111126333300027693Freshwater SedimentMSQAQGMSGFVAHRLSGLRLSPMEVTDATDRATTGDPED
Ga0209593_1020523823300027743Freshwater SedimentRKLLGARKLSGFVAHDLSGLLRSPLEVTDEADGDATGDPENAI
Ga0209514_10000222513300027819GroundwaterMLGARKLSGIVAHNLSGLRCRLEVTDEADRMATGDQEDAI
Ga0209514_1002178313300027819GroundwaterLGASKLSGIVAHYLSGLRCHDEVTNETVRDATGDPEDAICR
Ga0209514_1005857263300027819GroundwaterLGASKLSGIVAHYLSGLRCHDEVTNETVRDATGDPEDAICRGI
Ga0209514_1013447523300027819GroundwaterLGASKLSGIVAHYLSGLRCHEEVTNETVRIAAGDPEDAICRGI
Ga0209514_1017507133300027819GroundwaterMLGASKLSGIVAHYLSGLRCHEEVTNETVRIAAGDPEDAICR
Ga0209397_1070493013300027871WetlandGICYRLSRVRDMSGFVARNLSGLLWSPLEVMDETDGDATGDPEDAI
Ga0209777_1006369343300027896Freshwater Lake SedimentLLVTRDMSGFVAHDLSGLGWSPLEVTDATDRDATGDPEDAI
Ga0209777_1015407213300027896Freshwater Lake SedimentMSGFVAHKLTGLGYSPMEVNHEVDRAITGDLLKVRF
Ga0209777_1066956723300027896Freshwater Lake SedimentMSGFVAQDLSGLRWSPLEVTDETDRDATGDPEDAI
Ga0265292_104821513300028028Landfill LeachateLPTAFPPLSVTRKLSGFVAHDLSGLLRSSMEVTDETDGDATGDPEDAI
Ga0265296_100174613300028032GroundwaterLVTNDMSGIVAHNLSGLGWSPLEVTNEMDRGARGDPEDAI
Ga0265296_132458313300028032GroundwaterMRDMSSFVAHDLSGLRLSLMEVADATDRDATEDPEDAI
Ga0268284_101881633300028176Saline WaterMSEARKLSGFIAHDLSGLIWSPMEVTDETDRVVAG
Ga0268284_101900413300028176Saline WaterVSEARKLSGFIAHDLSGLIWSPMEVTDETDRVVAGD
Ga0268283_113558123300028283Saline WaterLSEARKLSGFIAHDLSGLIWSPMEVTDETDRVVAGDS
Ga0268280_101113753300028298Saline WaterMSEARKLSGFIAHDLSGLIWSPMEVTDETDRVVAGDSE
Ga0268280_103730123300028298Saline WaterLSGVVAHNLSGLVWPPLEVADETDRVATGDPEDAI
Ga0302253_100190713300028622Activated SludgeMSVTRKLSGIVAHNLSGLDSHRMEVTDAMDRDATGDPEDAI
Ga0302253_102386323300028622Activated SludgeSVTRKLSGIVAHNLSGLDSHRMEVTDAMDRDATGDPEDAI
(restricted) Ga0247841_1009392413300029286FreshwaterGNGKKHSFFMSEASKLSGFVARNLSGLIGSPMEVTDETDRVATGDPEDAI
(restricted) Ga0247841_1020281113300029286FreshwaterQSVRFVAHNLSGLLWSPLEVADETDGDATGDPEDAI
Ga0307371_13721923300029601Anaerobic Digestor SludgeMAVSVTRKLSGIVAHNLSGLDSHRMEVTDEMDRDATGDPEDAI
Ga0272442_1005377523300030616Marine SedimentMWILCGLSLARNMSGLVAHNLSGLRKGHQEVIHEMDRATTGDQDHAI
Ga0315291_1123835213300031707SedimentMSVTNDMSGFIAHNLSGLVGSPLEVTNETDRDATGEP
Ga0315293_1029058923300031746SedimentMLVAHDMSGFVARDLSGLRWSPMEVTDETDRDATGDPEDAI
Ga0315288_1013113013300031772SedimentMSVTNDMSGFIAHNLSGLVGSPLEVTNETDRDATGEPEDAIR
Ga0315288_1145987623300031772SedimentVSVAHDMSGFVAHDLSGLRWSPMEVTDETDRDATGDTEDAI
Ga0315290_1029864523300031834SedimentETLLEASNMSGIVARNLSGLIWSPMEVPDETDRDVTGDPEDAI
Ga0315297_1001980613300031873SedimentMSGFIAHNLSGLVGSPLEVTNETDRDATGEPEDAI
Ga0315285_1015695713300031885SedimentNDMSGIVAHNLSGLGWSPLEVTDEMDRDATGDPEDAI
Ga0214473_1158188223300031949SoilMSGSVAHDLSGLLKSPLEVTDATDGDATGDPEDAI
Ga0315294_1009446043300031952SedimentVALLEASNMSGIVARNLSGLIWSPMEVPDETDRDV
Ga0315294_1141044413300031952SedimentVLATNFVLEASNLSGIVARNLSGLIWSPLEVPDETDRDV
Ga0315278_1022956143300031997SedimentMLEASNMSGIVARNLSGLIWSPMEVADETDRDVTGDPEDAI
Ga0315289_10006890203300032046SedimentMSEASKVSGFVARNLSGLIWSPLEVPDETDRDVTGDP
Ga0315277_1040257023300032118SedimentDMSGIVAHNLSGLRCHREVTDETDRIDTGDPEDAI
Ga0315268_1269646913300032173SedimentSEASKLSGFVAHNLSGLLRSPSEVTDETDGDATGDPEDAI
Ga0315276_1038846033300032177SedimentVTRDMSGFVAHNLSGLLRSPMEVTDETDGDATGDPEDAI
Ga0315276_1176651313300032177SedimentYDRFIAHNLSGLLWSPMEVTDETDGDATGEPEDAI
Ga0315273_1172315323300032516SedimentMQLLEASNMSGIVARNLSGLIWSPMEVSNETDRDVTGDPEDAI
Ga0334722_1110244513300033233SedimentDLVLQLLGARDMSGIVAHNLSGLRCRREVTDETDRMATGDPENAI
Ga0316605_1036901123300033408SoilMSRVRDMSGFVARNLSGLLWSPLEVMDETDGDATGDPEDAI
Ga0316625_10261586823300033418SoilKRKGEKMSVTNDMSGFVAHNLSGLRWSPMEVTDEADRDATGDPEDAI
Ga0326726_1207897613300033433Peat SoilMSGLVAHKLSGLKLPFMEVTDETDGDVTGDPEDAI
Ga0316627_10193553613300033482SoilRDMSGIVAHNLSGLRCHQEVTNETDRMATGDQEDAI
Ga0316624_1000414353300033486SoilMSRHPGKIVTRDMSGFVAHDLSSLRWSLMEVADETDRDATGDPEDTI
Ga0316624_1057650223300033486SoilSRKTRHLLVAHDMSGFVAHDLSGLRWSPMEVTDETDRDTTGEPEDAI
Ga0316621_1024699413300033488SoilYVRFIAHNLSGLLWSPTEVTDETDGDTTGDPDDAI
Ga0316621_1035054113300033488SoilYVRFVAHNLSGLLRSPTEVTDETDGDATGDPEDAI
Ga0316628_10030385933300033513SoilMSGFVAHDLSSLRWSLMEVADETDRDATGDPEDTI
Ga0316616_10038183413300033521SoilLLRARDMSGFVAHDLSGLGWSPMEVTDETDGVVTGDPEDEI
Ga0316617_10107646323300033557SoilKRGKVSGASKLSGFVAHSLSGLLWSPLEVADETDGDTTGDPEDAI
Ga0316617_10129083423300033557SoilMSGFVAHDLSGLLRSPQEVTDEADGDATGDPEDAI
Ga0334848_077016_431_5563300033827SoilMSVTNDMSGFVAHNLSGLLWSPVEVTDETDRDATGDPGDAI
Ga0370479_0029417_3_1613300034123Untreated Peat SoilLYKELSSEIFRVSVTHDMSGFVAHNLSGLRWSPLEVTDETDGGMAGEPEDAI
Ga0370507_0158907_107_2143300034158Untreated Peat SoilMSSFVAHDLSGLRWSLMTVADATDRDATGDPEDAI
Ga0370480_0171442_603_7373300034169Untreated Peat SoilIEEVSVTNDMSGFVAHNLSGLRWSPMEVMDEADRDATGDPEDAI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.