NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F036501

Metagenome / Metatranscriptome Family F036501

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036501
Family Type Metagenome / Metatranscriptome
Number of Sequences 170
Average Sequence Length 72 residues
Representative Sequence YRFATENYAKEGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK
Number of Associated Samples 145
Number of Associated Scaffolds 170

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.76 %
% of genes near scaffold ends (potentially truncated) 90.59 %
% of genes from short scaffolds (< 2000 bps) 86.47 %
Associated GOLD sequencing projects 134
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.353 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(12.941 % of family members)
Environment Ontology (ENVO) Unclassified
(27.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.706 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122
1SwRhRL3b_0679.00000140
22213784503
3ICChiseqgaiiDRAFT_07712781
4Ga0066398_101666512
5Ga0062591_1004606911
6Ga0062383_107403122
7Ga0066678_103431362
8Ga0065715_110663401
9Ga0066388_1047193432
10Ga0070680_1008399613
11Ga0068868_1023547292
12Ga0070668_1000664366
13Ga0070671_1016880501
14Ga0070674_1003080751
15Ga0070711_1005994531
16Ga0070705_1009428921
17Ga0070705_1018421762
18Ga0070708_1007244221
19Ga0070708_1014066671
20Ga0066682_106950061
21Ga0070662_1019211422
22Ga0070707_1007601273
23Ga0066694_101328101
24Ga0068864_1003052104
25Ga0068864_1004226531
26Ga0066905_1015684732
27Ga0068862_1021287422
28Ga0066696_111117032
29Ga0075417_100012841
30Ga0075417_101789764
31Ga0075428_1019893971
32Ga0075421_1011828671
33Ga0075430_1003669753
34Ga0075431_1004332523
35Ga0075420_1015726402
36Ga0075425_1000909194
37Ga0075429_1000123091
38Ga0075419_100056389
39Ga0075419_112709112
40Ga0075435_1003853243
41Ga0075435_1010786711
42Ga0066710_1026576813
43Ga0099828_100430853
44Ga0099827_108690021
45Ga0075418_100468375
46Ga0111538_140743802
47Ga0075423_104129022
48Ga0075423_108275092
49Ga0075423_113224781
50Ga0075423_120512941
51Ga0114945_101008032
52Ga0114944_14761011
53Ga0126374_102563522
54Ga0126380_115208152
55Ga0126384_112532042
56Ga0126382_119837552
57Ga0126373_104946461
58Ga0134088_100938902
59Ga0134088_105159231
60Ga0134111_105255991
61Ga0126370_103000602
62Ga0126370_119605402
63Ga0126372_100172331
64Ga0126372_107782772
65Ga0126377_101279521
66Ga0126381_1002296844
67Ga0126383_100474544
68Ga0126383_103492192
69Ga0134122_102687933
70Ga0134121_103529271
71Ga0134121_107327133
72Ga0134123_131255092
73Ga0137312_10431792
74Ga0137448_10298871
75Ga0137423_10522893
76Ga0137389_112720652
77Ga0137349_10248603
78Ga0137388_114874581
79Ga0137382_101768572
80Ga0137363_100796741
81Ga0137374_112820171
82Ga0137362_110739242
83Ga0137381_115170922
84Ga0137376_101240054
85Ga0137379_112614982
86Ga0137385_111386591
87Ga0157346_10055921
88Ga0157331_10259441
89Ga0157298_102816761
90Ga0137394_104793083
91Ga0137407_104766083
92Ga0137407_112383761
93Ga0126375_113119792
94Ga0164303_105270111
95Ga0164303_112477561
96Ga0157378_103875683
97Ga0180070_10020031
98Ga0180075_10219631
99Ga0180093_10515873
100Ga0132258_109124623
101Ga0132258_122022554
102Ga0132258_123249832
103Ga0132256_1004105842
104Ga0132257_1042698452
105Ga0132255_1005256052
106Ga0132255_1037311161
107Ga0132255_1046800471
108Ga0182036_110827921
109Ga0182033_100168896
110Ga0182033_100764761
111Ga0182033_108591262
112Ga0182035_104569481
113Ga0182032_116662411
114Ga0182034_101311151
115Ga0182040_101653833
116Ga0182040_105360412
117Ga0182038_116770012
118Ga0182038_120645032
119Ga0187825_103131361
120Ga0184632_103181171
121Ga0184633_102017951
122Ga0184612_105856892
123Ga0184625_101823752
124Ga0066667_122857562
125Ga0190270_111602851
126Ga0173481_100770001
127Ga0206224_10431322
128Ga0210382_101383433
129Ga0182009_105618921
130Ga0210409_114202262
131Ga0213856_10389141
132Ga0222622_103830872
133Ga0209399_100195715
134Ga0207660_106287841
135Ga0207649_106779633
136Ga0207681_100841121
137Ga0207691_117502761
138Ga0207668_103501142
139Ga0207641_120195852
140Ga0207676_103037961
141Ga0209237_11170872
142Ga0209376_10407011
143Ga0209896_10276531
144Ga0209819_100092123
145Ga0209261_100546172
146Ga0209814_100021281
147Ga0207428_103442981
148Ga0209382_116061803
149Ga0209820_12378641
150Ga0268265_120434381
151Ga0307281_103475412
152Ga0170824_1218785691
153Ga0306917_110838531
154Ga0307473_112988602
155Ga0306925_121663181
156Ga0310913_108373362
157Ga0326597_116254571
158Ga0307409_1002269913
159Ga0306922_105981521
160Ga0310911_108184361
161Ga0318533_111411272
162Ga0306924_121606211
163Ga0307470_106346852
164Ga0335082_108659511
165Ga0335077_102589082
166Ga0310810_100850515
167Ga0310810_102322423
168Ga0364937_071919_440_667
169Ga0364929_0181627_469_690
170Ga0364933_111598_418_651
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.54%    β-sheet: 0.00%    Coil/Unstructured: 49.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065YRFATENYAKEGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWKSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
92.9%7.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Watersheds
Wetland Sediment
Freshwater Sediment
Thermal Springs
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Groundwater Sand
Deep Subsurface Sediment
Sediment
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Populus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
4.1%5.9%8.8%8.2%3.5%8.8%3.5%4.7%3.5%12.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL3b_0679.000001402162886006Switchgrass RhizosphereYRFATENYAKEGMVPEGALSAMVKQMVQSNLIDAKIAANTPLTAYYDNRYVDEVKRSGFFDQLWK
22137845032209111006Arabidopsis RhizosphereVIMKWMPMKDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK
ICChiseqgaiiDRAFT_077127813300000033SoilDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSSLIDAKLAASTPITAYYDNRYVEEVKRSGFFDQLWK*
Ga0066398_1016665123300004268Tropical Forest SoilATENYAKEGTVPEAALSAMVKQMVQSNQIDAKMAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0062591_10046069113300004643SoilENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAASTPMTAYYDSRYVDEVRQSGFFEQLWR
Ga0062383_1074031223300004778Wetland SedimentGAKKIMAKWLPMKEADIAEELYRFATENYAKEGFTPEGALRAMTKQMVASNLVDAKAAATTPVTAYYDNRYVDEVKRSGFFEQLGR*
Ga0066678_1034313623300005181SoilATENYSREGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0065715_1106634013300005293Miscanthus RhizosphereRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDSRYVEEVKQSGFFDQLWR*
Ga0066388_10471934323300005332Tropical Forest SoilRELTKRVINKWMPLKDPDLLEQVYRFATENYAKEGFVPEVALAGMVKQMVQSNLIDAKIAAATPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0070680_10083996133300005336Corn RhizosphereDKDLTKKVMAKWMPMKDPDLAEQLYRVATENYSKEGIVPEAALRGMVKQMVQSNLIDAKIAASTPMTAYYDNRYVEEVKRSGFFDQLWR*
Ga0068868_10235472923300005338Miscanthus RhizosphereYLFASENYAKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK*
Ga0070668_10006643663300005347Switchgrass RhizosphereYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR*
Ga0070671_10168805013300005355Switchgrass RhizosphereMSKWMPMKDADLVEQSYRFATENYSKEGVVPEAALRGMVKQMVQSNSIDAKAAASTPITAYYDGRYVDEVKQSGFFDQLWR*
Ga0070674_10030807513300005356Miscanthus RhizosphereDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK*
Ga0070711_10059945313300005439Corn, Switchgrass And Miscanthus RhizosphereATENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAASTPMTAYYDSRYVDEVRQSGFFEQLWR*
Ga0070705_10094289213300005440Corn, Switchgrass And Miscanthus RhizospherePMKDPDLLEQVYRFATENYSKEGLVPEGALRSTTKQMVQSNLIEAQAAAAMPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0070705_10184217623300005440Corn, Switchgrass And Miscanthus RhizosphereIMKWMPMKDPDLLEQAYLFAAENYAKEGLVGEGALRSMVKQMVQSNLIDAKAAASTPVTAYYDNRYVEEVKRSGFFEQLWK*
Ga0070708_10072442213300005445Corn, Switchgrass And Miscanthus RhizosphereRVITKWMPLKDPDLLEQVYRFATENYSKEGFVPEAAIGSMVKQMVQSNIVDAKIAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0070708_10140666713300005445Corn, Switchgrass And Miscanthus RhizosphereENYSKEGFVPEGALRSMTKQMVQSNLVEAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0066682_1069500613300005450SoilMKDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSSLIDPKLAGSMPITAYYDNRYVEEVKRSGFFDQLWR*
Ga0070662_10192114223300005457Corn RhizosphereKEGLVGEGALRSMVKQMVQSNLIDAKAAASTPVTAYYDNRYVEEVKRSGFFEQLWK*
Ga0070707_10076012733300005468Corn, Switchgrass And Miscanthus RhizosphereTENYSKEGFVPEGALRSMTKQMVQSNLVEAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0066694_1013281013300005574SoilQTDKALTKKIMMKWMPMKDADLLEQAYLFATENYAKEGVVSESALRSMVKQMAQSNLIDAKAVANTPVTAYYDNRYVEEVKRSGFFEQLWR*
Ga0068864_10030521043300005618Switchgrass RhizosphereEQSYRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR*
Ga0068864_10042265313300005618Switchgrass RhizosphereKEGLVGEGALRSMVKQMVQSNLIDAKAAASTPVTAYYDNRYVEEVKRSGFFDQLWK*
Ga0066905_10156847323300005713Tropical Forest SoilTENYAKEGTVPEAALSAMVKQMVQSNQIDAKMAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0068862_10212874223300005844Switchgrass RhizosphereYAKEGLVGEGALRSMVKQMVQSNLIDAKAAASTPVTAYYDNRYVEEVKRSGFFDQLWK*
Ga0066696_1111170323300006032SoilAEAIKLIQTDKAFTKKIMMKWMPMKDADLLEQAYLFATENYAKEGVVSESALRSMVKQMAQSNLIDAKAVANTPVTAYYDNRYVEEVKRSGFFEQLWR*
Ga0075417_1000128413300006049Populus RhizosphereTKWMPLKDPDLLEQVYLFATENFAKEGTVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075417_1017897643300006049Populus RhizosphereNKWMPMKDTDLVEQTYRFATENFAKEGMVPEAALRGMVKQMVQSNLADAKMASATPLTAYYDNRYVDEVKRSGFFDQLWR*
Ga0075428_10198939713300006844Populus RhizosphereKKVIMKWMPMKDPDLLEQAYLFAAENYAKEGIVNEGALRSMVKQMVQSNLIDAKLAASTPVTAYYDNRYVDEVKRSGFFDQLWR*
Ga0075421_10118286713300006845Populus RhizosphereKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWR*
Ga0075430_10036697533300006846Populus RhizosphereYTKKVMSKWMPMNDADMVEQSYRFATENYAKEGMIPEAALRGMVKQMVQSNLADPKMASATPLTAYYDNRYVEEVKRSGFFDQLWR*
Ga0075431_10043325233300006847Populus RhizosphereDKEYTKKVIMKWMPMKDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSSLIDAKLAASTPITAYYDNRYVEEVKRSGFFDQLWR*
Ga0075420_10157264023300006853Populus RhizosphereAKEGMIPEAALRGMVKQMVQSNLADPKMASATPLTAYYDNRYVEEVKRSGFFDQLWR*
Ga0075425_10009091943300006854Populus RhizosphereDPDLLEQVYLFATENFAKEGTVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075429_10001230913300006880Populus RhizospherePDLLEQVYLFATENFAKEGTVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075419_1000563893300006969Populus RhizosphereEQVYLFATENFAKEGTVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075419_1127091123300006969Populus RhizosphereWMPMNDADMVEQSYRFATENYAKEGMIPEAALRGMVKQMVQSNLADPKMASATPLTAYYDNRYVEEVKRSGFFDQLWR*
Ga0075435_10038532433300007076Populus RhizosphereEFTKKVITKWMPLKDPDLLEQVYLFATENFAKEGTVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075435_10107867113300007076Populus RhizosphereWMPMKDADLVEQSYRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDSRYVEEVKQSGFFDQLWR*
Ga0066710_10265768133300009012Grasslands SoilRIVSFAGESFAKEPFVPEGAIRAIVKEMAQANLIDAKAAANTPMTAYYDNRYVDELKRSGFFNQLWK
Ga0099828_1004308533300009089Vadose Zone SoilFSKEGFVPESALRSTTKQMVQSNLVEAQTAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0099827_1086900213300009090Vadose Zone SoilMLEQVYRFATENYSKEGFVPEGALRSMTKQMVQSNLVDAKAAAATPVTAYYDNRYVEEVKKSGFFDQLWK*
Ga0075418_1004683753300009100Populus RhizosphereYRFATENYAKEGMVPEGALSAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0111538_1407438023300009156Populus RhizosphereDLLEQVYRFATENYSKEGIVPEAALSAMVKQMVQSNLIDPKIAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075423_1041290223300009162Populus RhizosphereVEQSYRFATENYSKEGVVPEAALRGMLKQMVQSNSIDAKAAASTPITAYYDGRYVDEVRQSGFFDQLWR*
Ga0075423_1082750923300009162Populus RhizosphereLLEQVYRFATENYSKEGFVPEAAIGSMVKQMVQSNIVDAKIAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0075423_1132247813300009162Populus RhizosphereRWMPMKDADLVEQSYRFATENYSKEGVVPEPALRGMIKQMVQSNSIDAKAAASTPITAYYDSRYVDEVKQSGFFDQLWR*
Ga0075423_1205129413300009162Populus RhizosphereEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDSRYVEEVKQSGFFDQLWR*
Ga0114945_1010080323300009444Thermal SpringsVDALEQTYRFSVENFAKEPFVPEGALRAMVKQMVQSNLIDAKAAANTPLTAYYDNRYVDELKRSGFFDQLWR*
Ga0114944_147610113300009691Thermal SpringsENFAKEPFVPEGALRAMVKQMVQSNLIDAKAAANTPLTAYYDNRYVDELKRSGFFDQLWR
Ga0126374_1025635223300009792Tropical Forest SoilTKRVINKWMPLKDPDLLEQVYRFATENYAKEGFVPEAALAGMVKQMVQSNLIDAKIAAATPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0126380_1152081523300010043Tropical Forest SoilAEQSYRFATENYSKEGIVPEAALRGMVKQMVQSNLVDAKAAANTPVTAYYDNRYVEEVKQSGFFDQLWR*
Ga0126384_1125320423300010046Tropical Forest SoilYRFATENYAKEGTVPEAALSAMVKQMVQSNQIDAKMAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0126382_1198375523300010047Tropical Forest SoilRFATENYAKEGTVPEAALSAMVKQMVQSNQIDAKMAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0126373_1049464613300010048Tropical Forest SoilYSKEGVVSENALRSIAKQMVQNNLVDAKAVANIPVTAYYDNRYVEEVKRSGFFEQLWR*
Ga0134088_1009389023300010304Grasslands SoilYRFATENYSREGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0134088_1051592313300010304Grasslands SoilQLYRFATENYAKEGYVQEGALRAMTKQMVASNLVDAKAASSTPVTAYFDNRYVDEVKRSGFFDQLWK*
Ga0134111_1052559913300010329Grasslands SoilKWMPLKDADLLEQAYRFATENYSREGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0126370_1030006023300010358Tropical Forest SoilKWMPIKDPDLLEQVYRFATENYSKEGFVPEAALRSTTKQMLQSNLIEAQAAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0126370_1196054023300010358Tropical Forest SoilLLEQVYRFATENYSREGFVPEAALAGMVKQMVQTNLVDAKVAASTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0126372_1001723313300010360Tropical Forest SoilKWMPLKDPDLLEQVYRFATENYSKEGFVPEAALAGMVKQMVQSNLIDAKIAAATPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0126372_1077827723300010360Tropical Forest SoilDRELTKKVITKWMPLKDPDLLEQVYRFATENYSKEGFVPEAALGSMVKQMVQSNIIDAKMAAATPLTAYYDNRYVEEVKRSGFFEQLWK*
Ga0126377_1012795213300010362Tropical Forest SoilMKWMPVKDPDLLEQVYRFATENYSKEGFVPEGALRSTIKQMMQSNLIEAQAAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0126381_10022968443300010376Tropical Forest SoilEQVYRFATENYAREGSVPEGALRAMVKQMVQSNLIDPKAAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0126383_1004745443300010398Tropical Forest SoilYRFATENYAKEGFVPEAALAGMVKQMVQSNLIDAKIAAATPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0126383_1034921923300010398Tropical Forest SoilEFTKKVIMKWMPVKDPDLLEQVYRFATENYSKEGFVPEGALRSTIKQMMQSNLIEAQAAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0134122_1026879333300010400Terrestrial SoilDLVEQSYRFATENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAASTPMTAYYDSRYVDEVRQSGFFEQLWR*
Ga0134121_1035292713300010401Terrestrial SoilATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR*
Ga0134121_1073271333300010401Terrestrial SoilMPMKDPELLEQAYLTATENYAKEGFVSEGALRSIVKQMVQSNLIDAKAVANIPVTAYYDNRYVEEVKRSGFFDQLWK*
Ga0134123_1312550923300010403Terrestrial SoilPMKDPDLLEQAYLFAAENYAKEGLVNEGALRSMVKQMVQSNLIDAKAAASTPVTAYYDNRYVEEVKRSGFFDQLWK*
Ga0137312_104317923300011400SoilKDADLLEQAYLFAQENYSREGLVNDGALRSMVKQMMASNLVDPKLAASTPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137448_102988713300011427SoilKWMPMSDPDLVEQSYRFATENYSKEGLVPAAALCGMVKQMVQSNLADAKMAAATPVTAYYDNRYVEEVKRSGFFEQLWR*
Ga0137423_105228933300011430SoilSKEGFVPEGALRSMTKQMVQSNLVDAKAAAATPVTAYFDNRYVEEVKRSGFFDQLWR*
Ga0137389_1127206523300012096Vadose Zone SoilMPMKDPDMLEQVYRFATENFSKEGFVPESALRSTTKQMVQSNLVEAQAAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137349_102486033300012160SoilTKKVIMKWMPMKDPDMLEQVYRFATENYSNEGFVPESALRSTTKQMVQSNLVEAQAAAAMPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137388_1148745813300012189Vadose Zone SoilATENYSKEGFVPEGALRSMTKQMVQSNLVEAKAATATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137382_1017685723300012200Vadose Zone SoilMKWMPMKDADLLEQAYLFAAENYSKEGLVNEGALRSMVKQMVASSLIDAKLAASTPITAYYDNRYVEEVKRSGFFDQLWR*
Ga0137363_1007967413300012202Vadose Zone SoilKVIMKWMPMKDPDMLEQVYRFATENYSNEGFVPERALRSTIKQMVQSNLVEAQAAAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137374_1128201713300012204Vadose Zone SoilMATLGAQSKEEQVYRFATENYSKEGLVPEGALRSTTKQMVQSNLIEAQAAAAMPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137362_1107392423300012205Vadose Zone SoilFATENYSKEGLVPEGALRSTTKQMVQSNLIEAQAAAAMPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0137381_1151709223300012207Vadose Zone SoilYRFATENYAKEGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0137376_1012400543300012208Vadose Zone SoilAEAIKLIQTDKALTKKIMMKWMPMKDADLLEQAYLFATENYAKEGVVSESALRSMVKQMAQSNLIDAKAVANTPVTAYYDNRYVEEVKRSGFFEQLWR*
Ga0137379_1126149823300012209Vadose Zone SoilMMKWMPIKDADLLEQLYRFATENYAKEGYVQEGALRAMTKQMVASNLVDAKAASSTPVTAYFDNRYVDEVKRSGFFDQLWK*
Ga0137385_1113865913300012359Vadose Zone SoilENYSREGTVPEGALRAMVKQMVQSYRIDAKMVANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0157346_100559213300012480Arabidopsis RhizosphereKDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK*
Ga0157331_102594413300012486SoilITKWMPLKDPDLLEQVYRFATENYSKEGVVPEAALSAMVKQMVQSNLIDPKIAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0157298_1028167613300012913SoilMNKWMPMKDADLVEQSYRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR*
Ga0137394_1047930833300012922Vadose Zone SoilDLLEQVYRFATENYAKEGAVPEAALSAMVKQMVQSNLIDAKLAANTPLTAYYDNRYVEEVKRSGFFDQLWK*
Ga0137407_1047660833300012930Vadose Zone SoilEQLYRFATENYAKEGYVQEGALRAMTKQMVASNLVDAKAASSTPVTAYFDNRYVDEVKRSGFFDQLWK*
Ga0137407_1123837613300012930Vadose Zone SoilNYSKEGLVNEGALRSMVKQMVQSSLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK*
Ga0126375_1131197923300012948Tropical Forest SoilFATENYAREGTVPEAALSAMVKQMVQSNLIDPKAAANTPLTAYYDNRYVDEVKRSGFFDQLWK*
Ga0164303_1052701113300012957SoilFTKKVIMKWMPMKDPEMLEQVYRFATENYSKEGFVPEGALRSMTKQMVQSNLVDAKAVAATPVTAYYDNRYVEEVKRSGFFDQLWR*
Ga0164303_1124775613300012957SoilDMLEQVYRFATENYSNEGFVPENALRSTTKQMVQSNLVEAQAAAATPVTAYYDNRYVEEVKRSGFFDQLWK*
Ga0157378_1038756833300013297Miscanthus RhizosphereYLTATENYAKEGFVSEGALRSIVKQMVQSNLIDAKAVANIPVTAYYDNRYVEEVKRSGFFDQLWK*
Ga0180070_100200313300015251SoilIQTDRDYTKKVIMKWMPMKDADLLEQAYLFAQEKYSREGLVNDGALRSMVKQMMASNLVDAKLAASTPVTAYYDNRYVEEVKRSGFFDQLVQIVQAVSAA*
Ga0180075_102196313300015252SoilQAYRFATENYAKEGFVPEAALRGMVKQMVQSNLADAKMAAATPLTAYYDNRYVDEVKRSGFFEQLWK*
Ga0180093_105158733300015258SoilLFQRGFVPEGALRSMTKQMVQSNLVDAKAAAATPVTAYFDNRYVEEVKRSGFFDQLWR*
Ga0132258_1091246233300015371Arabidopsis RhizosphereMPMKDADLVEQSYRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDSRYVEEVKQSGFFDQLWR*
Ga0132258_1220225543300015371Arabidopsis RhizosphereTENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAASTPLTAYYDSRYVEEVKQSGFFEQLWR*
Ga0132258_1232498323300015371Arabidopsis RhizosphereMTSDAYENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAANTPMTAYYDSRYVEEVKQSGFFEQLWQ*
Ga0132256_10041058423300015372Arabidopsis RhizosphereMTSDAYENYSKEGLAPEAALRGMVKQMVQSNLIDAKAAASTPMTAYYDSRYVDEVKQSGFFEQLGQ*
Ga0132257_10426984523300015373Arabidopsis RhizosphereSLAVQPLAKSDNNMTSDAYENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAANTPMTAYYDSRYVEEVKQSGFFEQLWR*
Ga0132255_10052560523300015374Arabidopsis RhizosphereMTSDAYENYSKEGLAREAALRGMVKQMVQSNLIDAKAAASTPMTAYYDSRYVDEVKQSGFFKQLWR*
Ga0132255_10373111613300015374Arabidopsis RhizosphereSYRFAIENYSKEGLVPEAALRGMVKQMVQSNLIDAKVAANTPMTAYYDSRYVEEVKQSGFFDQLWR*
Ga0132255_10468004713300015374Arabidopsis RhizosphereENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAANTPMTAYYDSRYVEEVKQSGFFEQLWQ
Ga0182036_1108279213300016270SoilWMPMKDPEMLEQVYRFATENYSKEGFVPEGALRSMTKQMVQSNLVEAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWRKG
Ga0182033_1001688963300016319SoilVAAKNKDTVIRVIKLTAESIKLVQTDRKFSKKVIMKWMPIKDPEMLEQVYRFVPESTLRSMTMQMVQSNLIDATAAAETPVTVYGYVEEVKRSGFFDQLWR
Ga0182033_1007647613300016319SoilMLEQVYRFATENYSKEGFVPEGALRSMTKQMVQSNLVEAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWK
Ga0182033_1085912623300016319SoilDYSKEGFVPESALRSMTKQMVQSNLVDATAAAETPVTAYYDNSYVEEVKRSGFFDQLWK
Ga0182035_1045694813300016341SoilTDREFTKKVIMKWMPMKDPEMLEQVYRFATEDYSKEGFVPESALRCMTKQMVQSNLIDATAAAETPATVYGYVEEVKRSGFFDQLWR
Ga0182032_1166624113300016357SoilFATENYSKEGVVPEAALRGMVKQMVQSNSIDAKAAASTPMTAYYDSRYVEEVKQSGFFDQLWK
Ga0182034_1013111513300016371SoilPIKDPEMLEQVYRFATEDYSKEGFVPESALRSMTKQMVQSNLVDATAAAETPVTAYYDNSYVEEVKRSGFFDQLWK
Ga0182040_1016538333300016387SoilFSKKVIMKWMPIKDPEMLEQVYRFATEDYSKEGFVPESALRSMTKQMVQSNLVDATAAAETPVTAYYDNSYVEEVKRSGFFDQLWK
Ga0182040_1053604123300016387SoilTAESIKLVQTDRKFSKKVIMKWMPIKDPEMLEQVYRFVPESALRSMTKQMVQSNLIDATAAAETPATVYGYVEEVKRSGFFDQLWR
Ga0182038_1167700123300016445SoilWMPIKDPEMLEQVYRFVPESALRCMTKQMVQSNLIDATAAAETPATVYGYVEEVKRSGFFDQLWR
Ga0182038_1206450323300016445SoilFTKKVIMKWMPMKDPDMLEQVYRFATENYSNEGFVPERALRSTTKQMVQSNLVEPQTAAATPVTAYYDNRYVEEVKRSGFFDQLWRKG
Ga0187825_1031313613300017930Freshwater SedimentYGFATENYSKEGLVPEAALRGMVKQMVQSNLIDAKAAASTPMTAYYDSRYVDEVKQSGFFDQLWR
Ga0184632_1031811713300018075Groundwater SedimentLLEQVYRFATENYAKEGAVPEAALSAMVKQMVQSNLIDAKLAANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0184633_1020179513300018077Groundwater SedimentDADLVEQSYRFATENFAKEGFIPEAALRGMVKQMVQSNLADAKTAAATPLTAYYDNRYVDEVKRSGFFEQLWR
Ga0184612_1058568923300018078Groundwater SedimentPMKDPDLLEQAYLFAAENYAKEGLVNEGALRSMVKQMVQSNLIDAKAAANTPITAYYDNRYVEEVKRSGFFDQLWR
Ga0184625_1018237523300018081Groundwater SedimentITKWMPLKDPDLLEQVYRFATENYAKEGAVPEAALSAMVKQMVQSNLIDAKLAANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0066667_1228575623300018433Grasslands SoilDLLEQAYRFATENYSREGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0190270_1116028513300018469SoilMKWMPMKDPDLLEQAYLFAAENYAKEGLVNEGALRSMVKQMVQSNLIDTKLAASTPVTAYYDNRYVEEVKRSGFFEQLWK
Ga0173481_1007700013300019356SoilQSYRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR
Ga0206224_104313223300021051Deep Subsurface SedimentNFAKEGFVPEAALRGMVKQMVQSNLADAKMAAATPLTAYYDNSYVDEVKRSGFFEQLWK
Ga0210382_1013834333300021080Groundwater SedimentPMKDADLLDQAYVFAAENYAKEGLVNEGALRSMVKQMVQSSLIDSKAAASTPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0182009_1056189213300021445SoilKEADLADRIAAFAAESFAKEPLVPEAAIRDILKGMVQSNLVEAKAAAATPLSAYYDNRYVEELKRAGFFAQLWK
Ga0210409_1142022623300021559SoilVIMKWMPMKDPDLLEQVYRFATENYSKEGLVPEGALRSTTKQMVQSNLIEAQAATAMPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0213856_103891413300021947WatershedsLLEQVYRFATENYSKEGVVPEAALSAMVKQMVQSNLIDPKIAANTPLTAYYDDRYVEEVKRSGFFDQLWK
Ga0222622_1038308723300022756Groundwater SedimentTDKDYTKKVIMKWMPMKDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSSLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK
Ga0209399_1001957153300025157Thermal SpringsVDALEQTYRFSVENFAKEPFVPEGALRAMVKQMVQSNLIDAKAAANTPLTAYYDNRYVDELKRSGFFDQLWR
Ga0207660_1062878413300025917Corn RhizosphereMPMKDPDLAEQLYRVATENYSKEGIVPEAALRGMVKQMVQSNLIDAKIAASTPMTAYYDNRYVEEVKRSGFFDQLWR
Ga0207649_1067796333300025920Corn RhizosphereRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR
Ga0207681_1008411213300025923Switchgrass RhizosphereFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR
Ga0207691_1175027613300025940Miscanthus RhizosphereYLFASENYAKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK
Ga0207668_1035011423300025972Switchgrass RhizospherePDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSNLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK
Ga0207641_1201958523300026088Switchgrass RhizosphereDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSSLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWK
Ga0207676_1030379613300026095Switchgrass RhizosphereEQSYRFATENYSKEGIVPEAALRGMLKQMVQSNLIDAKAAASTPITAYYDTRYVDEVKQSGFFDQLWR
Ga0209237_111708723300026297Grasslands SoilATENYSREGTVPEGALRAMVKQMVQSNLIDAKMVANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0209376_104070113300026540SoilYRFATENYSREGTVPEGALRAMVKQMVQSNLIDAKMAANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0209896_102765313300027006Groundwater SandNYAREGAVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0209819_1000921233300027722Freshwater SedimentMPLKDPDLLEQVYRFATENYAKEGAVPEAALGAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0209261_1005461723300027735Wetland SedimentYIQTNRDGTKKIMAKWLPMKEADIAEELYRFATENYAKEGFTPEGALRAMTKQMVASNLVDAKAAATTPVTAYYDNRYVDEVKRSGFFEQLGR
Ga0209814_1000212813300027873Populus RhizosphereTKWMPLKDPDLLEQVYLFATENFAKEGTVPEAALSAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0207428_1034429813300027907Populus RhizosphereENYSKEGIVPEAALRGMIKQMVQSNLIDAKAAASTPITAYYDSRYVDEVKQSGFFDQLWR
Ga0209382_1160618033300027909Populus RhizosphereKEGMVPEAALRGMVKQMVQSNLADAKMASATPLTAYYDNRYVDEVKRSGFFDQLWR
Ga0209820_123786413300027956Freshwater SedimentKEGAVPEAALGAMVKQMVQSNLIDAKLAASTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0268265_1204343813300028380Switchgrass RhizosphereYAKEGLVGEGALRSMVKQMVQSNLIDAKAAASTPVTAYYDNRYVEEVKRSGFFDQLWK
Ga0307281_1034754123300028803SoilATENYSKEGVVPEAALRGMVKQMVQSNLADAKMAAATPMTAYYDNRYVDEVKRSGFFEQLWK
Ga0170824_12187856913300031231Forest SoilMKWMPMKDPDLLEQAYLFASENYAKEGLVNEGALRSMVKQMVQSSLIDPKLAGSTPITAYYDNRYVEEVKRSGFFDQLWR
Ga0306917_1108385313300031719SoilMNKWMPMKDADLVEQSYRFATENYSKEGVVPEAALRGMVKQMVQSNSIDAKAAASTPMIAYYDSRYVEEVKQSGFFDQLWK
Ga0307473_1129886023300031820Hardwood Forest SoilTKRVIMKWMPMKDPDLLEQVYRFATENYSKEGLVPEGALRSTTKQMVQSNLIEAQAAAAMPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0306925_1216631813300031890SoilSIKLVQTDRKFSKKVIMKWMPIKDPEMLEQVYRFVPESALRSMTKQMVQSNLIDATAAAETPATVYGYVEEVKRSGFFDQLWR
Ga0310913_1083733623300031945SoilEQSYRFATENYSKEGVVPEAALRGMVKQMVQSNSIDAKAAASTPMTAYYDSRYVEEVKQSGFFDQLWK
Ga0326597_1162545713300031965SoilQFATENFSKEGIVPEGALRGMVKQMVQSNLVDAKLAAATPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0307409_10022699133300031995RhizosphereYRFATENYAKEGMIPEAALRGMVKQMVQSNLADPKMASATPLTAYYDNRYVEEVKRSGFFDQLWR
Ga0306922_1059815213300032001SoilMKDPEMLEQVYRFATENYSKEGFVPEGALRSMTKQMVQSNLVEAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWK
Ga0310911_1081843613300032035SoilKVIMKWMPIKDPEMLEQVYRFATEDYSKEGFVPESALRSMTKQMVQSNLVDATAAAETPVTAYYDNSYVEEVKRSGFFDQLWK
Ga0318533_1114112723300032059SoilTEDYSKEGFVPESALRSMTKQMVQSNLVDATAAAETPVTAYYDNSYVEEVKRSGFFDQLW
Ga0306924_1216062113300032076SoilATEDYSKEGFVPEGALRSMTKQMVQSNLVEAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWK
Ga0307470_1063468523300032174Hardwood Forest SoilKDPDLLEQVYRFATENYSKEGFVPEAAIGSMVKQMVQSNIIDAKIAANTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0335082_1086595113300032782SoilEMLEQVYRFATENYSKEGFVPEGALRSMTKQMVQSNLVNAKAAAATPVTAYYDNRYVEEVKRSGFFDQLWK
Ga0335077_1025890823300033158SoilYRFATENYSREGFVPEAALAGMVKQMVQSNLVDPKVAAGTPLTAYYDNRYVEEVKRSGFFDQLWK
Ga0310810_1008505153300033412SoilVQTLAKSDNNMTSDAYENYSKEGLAPEAALRGMVKQMVQSNLIDAKAAANTPMTAYYDSRYVEEVKQSGFFEQLWQ
Ga0310810_1023224233300033412SoilMPLKDADLLDDLYRFATENYSKEGITPEGALRSMAKQMAQSNLIDAKAAAATPVTAYYDNRYVEDVKRSGFFDQLWK
Ga0364937_071919_440_6673300034113SedimentMKDSEMMELVYRFATENFSKDGTVPEDALRGMVKQMVQSNLVDAKLAAATPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0364929_0181627_469_6903300034149SedimentDADLLEQAYLFAQENYSREGLVNDGALRSMVKQMMASNLVDPKLAASTPVTAYYDNRYVEEVKRSGFFDQLWR
Ga0364933_111598_418_6513300034150SedimentMPLKDPDLLEQVYRFATENYAKEGAVPEAALSAMVKQMVQSNLIDAKLAANTPLTAYYDNRYVEEVKRSGFFDQLWK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.