Metagenome / Metatranscriptome Family F036320

Basic Information
Family ID	F036320
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	51 residues
Representative Sequence	MVSQVNEHLGIPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQ
Number of Associated Samples	143
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.45 %
% of genes near scaffold ends (potentially truncated)	97.65 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	140
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (92.941 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.294 % of family members)
Environment Ontology (ENVO)	Unclassified (28.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.824 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.98% β-sheet: 0.00% Coil/Unstructured: 58.02%
Feature Viewer

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Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF07687	M20_dimer	17.65
PF01546	Peptidase_M20	15.29
PF07883	Cupin_2	5.29
PF00528	BPD_transp_1	3.53
PF02776	TPP_enzyme_N	2.94
PF02423	OCD_Mu_crystall	1.76
PF02775	TPP_enzyme_C	1.18

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	1.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.94 %
Unclassified	root	N/A	7.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.94 %
Unclassified	root	N/A	7.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.94 %
Unclassified	root	N/A	7.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.53 %
Unclassified	root	N/A	7.06 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.41 %
Unclassified	root	N/A	7.06 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.65 %
Unclassified	root	N/A	7.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.06 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.53 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.06 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	4.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.53 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.06 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	4.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.53 %
Phyllobacterium zundukense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium zundukense	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.06 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.53 %
Phyllobacterium zundukense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium zundukense	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10203427	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300004152\|Ga0062386_100401890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1103	Open in IMG/M
3300005163\|Ga0066823_10007832	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005169\|Ga0066810_10201476	Not Available	500	Open in IMG/M
3300005174\|Ga0066680_10210738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300005186\|Ga0066676_10336831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300005332\|Ga0066388_102179858	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300005332\|Ga0066388_102517370	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300005341\|Ga0070691_10367858	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300005355\|Ga0070671_101824970	Not Available	540	Open in IMG/M
3300005363\|Ga0008090_10095992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1178	Open in IMG/M
3300005367\|Ga0070667_102088642	Not Available	534	Open in IMG/M
3300005435\|Ga0070714_101066516	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300005440\|Ga0070705_100540430	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300005441\|Ga0070700_102018876	Not Available	500	Open in IMG/M
3300005445\|Ga0070708_100110562	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300005456\|Ga0070678_100618479	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300005466\|Ga0070685_10137426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1535	Open in IMG/M
3300005530\|Ga0070679_101971440	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005539\|Ga0068853_101025630	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300005547\|Ga0070693_100247635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1180	Open in IMG/M
3300005564\|Ga0070664_101065913	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300005616\|Ga0068852_101372322	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300005617\|Ga0068859_101880656	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005713\|Ga0066905_100976777	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005713\|Ga0066905_101879691	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005718\|Ga0068866_10645367	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300005764\|Ga0066903_102854362	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300005764\|Ga0066903_103729073	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300005764\|Ga0066903_104247223	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005764\|Ga0066903_106060663	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300006028\|Ga0070717_10926230	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300006038\|Ga0075365_10080814	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300006038\|Ga0075365_11247535	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300006057\|Ga0075026_101082155	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300006177\|Ga0075362_10323734	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300006581\|Ga0074048_10058158	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300006604\|Ga0074060_10011115	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300006606\|Ga0074062_10028294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300006791\|Ga0066653_10629718	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300006804\|Ga0079221_11171088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300006844\|Ga0075428_100256121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1885	Open in IMG/M
3300006844\|Ga0075428_102647763	Not Available	512	Open in IMG/M
3300006845\|Ga0075421_102542096	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300009011\|Ga0105251_10230413	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300009089\|Ga0099828_10641449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	955	Open in IMG/M
3300009092\|Ga0105250_10621247	Not Available	502	Open in IMG/M
3300009101\|Ga0105247_10156954	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300009148\|Ga0105243_10053884	All Organisms → cellular organisms → Bacteria	3191	Open in IMG/M
3300009551\|Ga0105238_11024404	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300010043\|Ga0126380_10845381	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300010043\|Ga0126380_12166353	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010046\|Ga0126384_11787396	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010047\|Ga0126382_10375745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300010048\|Ga0126373_12189397	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010301\|Ga0134070_10285191	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010359\|Ga0126376_11617828	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300010359\|Ga0126376_12514990	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300010360\|Ga0126372_10458195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1184	Open in IMG/M
3300010360\|Ga0126372_10635907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300010360\|Ga0126372_11423536	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300010361\|Ga0126378_10964024	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300010361\|Ga0126378_12435936	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300010361\|Ga0126378_13296546	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010366\|Ga0126379_11116614	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300010366\|Ga0126379_12069857	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010366\|Ga0126379_12321048	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300010376\|Ga0126381_101195332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300010398\|Ga0126383_10383274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300010398\|Ga0126383_12262270	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300010398\|Ga0126383_12571630	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010401\|Ga0134121_10212330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1679	Open in IMG/M
3300011106\|Ga0151489_1028782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300011119\|Ga0105246_10407163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
3300011119\|Ga0105246_10618649	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300011270\|Ga0137391_11201992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	606	Open in IMG/M
3300011271\|Ga0137393_11303825	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300012189\|Ga0137388_11037889	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300012205\|Ga0137362_11457759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium zundukense	571	Open in IMG/M
3300012212\|Ga0150985_106622483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2276	Open in IMG/M
3300012355\|Ga0137369_10454865	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300012363\|Ga0137390_11604049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	588	Open in IMG/M
3300012469\|Ga0150984_103759517	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300012685\|Ga0137397_10472160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	934	Open in IMG/M
3300012930\|Ga0137407_12358903	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300012951\|Ga0164300_10956024	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012971\|Ga0126369_12955925	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012985\|Ga0164308_11417006	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012986\|Ga0164304_10281621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300012988\|Ga0164306_11689608	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300016294\|Ga0182041_10960449	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300016294\|Ga0182041_11151323	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300016445\|Ga0182038_10874498	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300017792\|Ga0163161_11743174	Not Available	553	Open in IMG/M
3300018031\|Ga0184634_10241331	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300018433\|Ga0066667_10403507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1105	Open in IMG/M
3300018465\|Ga0190269_10522308	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300018469\|Ga0190270_12363421	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300019866\|Ga0193756_1042694	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300020004\|Ga0193755_1077637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300021088\|Ga0210404_10128534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1309	Open in IMG/M
3300021432\|Ga0210384_10285074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1487	Open in IMG/M
3300021560\|Ga0126371_11409721	Not Available	827	Open in IMG/M
3300021560\|Ga0126371_11869760	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300022694\|Ga0222623_10216049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	743	Open in IMG/M
3300025931\|Ga0207644_11001183	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300025972\|Ga0207668_10598313	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300027560\|Ga0207981_1059179	Not Available	701	Open in IMG/M
3300027882\|Ga0209590_10165812	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300027884\|Ga0209275_10337833	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300028705\|Ga0307276_10182088	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300028793\|Ga0307299_10073805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1266	Open in IMG/M
3300028819\|Ga0307296_10254729	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300028824\|Ga0307310_10122100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300030336\|Ga0247826_11219338	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031152\|Ga0307501_10177668	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031231\|Ga0170824_128110406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1175	Open in IMG/M
3300031366\|Ga0307506_10314856	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031474\|Ga0170818_110844738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1175	Open in IMG/M
3300031543\|Ga0318516_10068496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1963	Open in IMG/M
3300031544\|Ga0318534_10105819	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300031546\|Ga0318538_10396538	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300031549\|Ga0318571_10271732	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300031573\|Ga0310915_10216011	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300031668\|Ga0318542_10534387	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031682\|Ga0318560_10391752	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300031723\|Ga0318493_10269373	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300031736\|Ga0318501_10107117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1401	Open in IMG/M
3300031736\|Ga0318501_10582436	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031748\|Ga0318492_10455021	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031771\|Ga0318546_10018961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3891	Open in IMG/M
3300031778\|Ga0318498_10441930	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031782\|Ga0318552_10048269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2010	Open in IMG/M
3300031792\|Ga0318529_10431384	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031793\|Ga0318548_10584397	Not Available	543	Open in IMG/M
3300031795\|Ga0318557_10030548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2175	Open in IMG/M
3300031795\|Ga0318557_10230271	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300031796\|Ga0318576_10120250	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300031799\|Ga0318565_10024961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2659	Open in IMG/M
3300031819\|Ga0318568_10244017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300031820\|Ga0307473_10564316	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300031831\|Ga0318564_10146802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300031833\|Ga0310917_10506022	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300031835\|Ga0318517_10023746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2397	Open in IMG/M
3300031846\|Ga0318512_10067974	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300031846\|Ga0318512_10144761	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300031859\|Ga0318527_10011882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2911	Open in IMG/M
3300031860\|Ga0318495_10006767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4593	Open in IMG/M
3300031912\|Ga0306921_11229277	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300031945\|Ga0310913_10085766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2108	Open in IMG/M
3300031959\|Ga0318530_10111590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300031959\|Ga0318530_10256073	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300032010\|Ga0318569_10412785	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300032039\|Ga0318559_10129782	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300032044\|Ga0318558_10341408	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300032052\|Ga0318506_10104489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300032055\|Ga0318575_10154770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1140	Open in IMG/M
3300032064\|Ga0318510_10021559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2060	Open in IMG/M
3300032066\|Ga0318514_10027113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2658	Open in IMG/M
3300032066\|Ga0318514_10166242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1148	Open in IMG/M
3300032090\|Ga0318518_10105210	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
3300032094\|Ga0318540_10297047	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300032122\|Ga0310895_10329635	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300032174\|Ga0307470_10547247	All Organisms → cellular organisms → Bacteria → Proteobacteria	855	Open in IMG/M
3300032261\|Ga0306920_100550104	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300032261\|Ga0306920_103432472	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300032261\|Ga0306920_104338381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300033550\|Ga0247829_11534139	Not Available	550	Open in IMG/M
3300034147\|Ga0364925_0117318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.71%
Host-Associated	Host-Associated	15.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	15.29%
Aquatic	Environmental → Aquatic	2.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.12%
Sediment	Environmental → Aquatic → Sediment	1.76%
Roots	Host-Associated → Plants → Roots	1.76%
Freshwater	Environmental → Aquatic → Freshwater	0.59%
Floodplain	Environmental → Terrestrial → Floodplain	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Loam	Environmental → Terrestrial → Soil → Loam	11.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.59%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.59%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.18%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.59%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102034273	3300001867	Forest Soil	MISQVNEHLGVPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIG
Ga0062386_1004018903	3300004152	Bog Forest Soil	MLDDHRLAVTTSEIVQWTRAFVRRPSPQTERFEHEPQVQSFIGETIVPLLQELSLPWRRD
Ga0066823_100078321	3300005163	Soil	MIRQVNERLGIPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELGLPWRRDA
Ga0066810_102014761	3300005169	Soil	MANEETGHLSVPTKDIVAWTRAFVRHPSPQTERFEHEPQVQSFIS
Ga0066680_102107381	3300005174	Soil	MVSQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHGPQVQSFIGERVVPLV
Ga0066676_103368311	3300005186	Soil	MVSQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELGLPWR
Ga0066388_1021798582	3300005332	Tropical Forest Soil	MVSQVNERLGIPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGGRVV
Ga0066388_1025173701	3300005332	Tropical Forest Soil	MAAQLGIPQDDIVAWTRAFVRHPSPQTEKFEYEPQVQSFIAEQVVPLAAKLGLPARRDQMGNLIVEL
Ga0070691_103678582	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFIAEQVMPLVQALGLPWRR
Ga0070671_1018249701	3300005355	Switchgrass Rhizosphere	VSEASGHLSVPTNDIVEWTRAFVRHPSPQTERFEHEPQVQ
Ga0008090_100959921	3300005363	Tropical Rainforest Soil	MVSQVNEHLSIPTEHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLV
Ga0070667_1020886422	3300005367	Switchgrass Rhizosphere	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFIAEQVVPLVQALGLPWRR
Ga0070714_1010665161	3300005435	Agricultural Soil	MISQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQV
Ga0070705_1005404302	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFIA
Ga0070700_1020188761	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEQVMPLVQALGLPWRR
Ga0070708_1001105624	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MISQVNEHLGGPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQEL
Ga0070678_1006184791	3300005456	Miscanthus Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEQVVPLVQALGLPWR
Ga0070685_101374262	3300005466	Switchgrass Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFI
Ga0070679_1019714401	3300005530	Corn Rhizosphere	VSEADGHLSVATRDIVEWTQAFVRYPSPQTERFEQEPRVQSFIAEQVVPLVQA
Ga0068853_1010256301	3300005539	Corn Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQS
Ga0070693_1002476352	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSEADGHLSVATRDIIEWTQAFVRHPSPQTERFEREPQVQSFIAEQVVPLVQALGLP
Ga0070664_1010659131	3300005564	Corn Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQ
Ga0068852_1013723221	3300005616	Corn Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFER
Ga0068859_1018806562	3300005617	Switchgrass Rhizosphere	VSEASGHLSVPTNDIVEWTRAFVRHPSPQTERFEHEPQVQRFIAEQVVPLVQ
Ga0066905_1009767771	3300005713	Tropical Forest Soil	MVSQVNERLGIPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGGRVVPLVQELGLPWRRD
Ga0066905_1018796912	3300005713	Tropical Forest Soil	MVSKTEGRLGVPDESIVEWTRAFVRHPSPQTERFEQEPQVQSFIGERVVPLVQ
Ga0068866_106453671	3300005718	Miscanthus Rhizosphere	VSEASGHLSVPTNDIVEWTRAFVRHPSPQTERFEHEPQVQRFIA
Ga0066903_1028543623	3300005764	Tropical Forest Soil	MVSEVNGHLGIPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIADEVVPRVKE
Ga0066903_1037290732	3300005764	Tropical Forest Soil	MVSQVNEHLGIPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIG
Ga0066903_1042472232	3300005764	Tropical Forest Soil	MVSQVNERLGIPTKHIVEWTQAFVRHPSPQTEHFEHEPQVQSFIGGRVVPLVQELGLPWRRDPMGNLLVEL
Ga0066903_1060606632	3300005764	Tropical Forest Soil	MATVSHERLGIATDDIVAWTRAFVRHPSPQTERFEYE
Ga0070717_109262302	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MISQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELGLPWR
Ga0075365_100808141	3300006038	Populus Endosphere	VSEADGHLSVATQDIVEWTQAFVRHPSPQTERFEHEP
Ga0075365_112475351	3300006038	Populus Endosphere	MVSEVNGHLGIPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFI
Ga0075026_1010821552	3300006057	Watersheds	VVSEANGHLSVPTKDIVEWTRAFVRHPSPQTERFEHEPQVQSFIAEQVVPLVQTLGLPWRRDPMGNLLVEL
Ga0075362_103237341	3300006177	Populus Endosphere	VSEADRHLSVATQDIVEWTQAFVRHPSPQTDRFEHEPQVQSFI
Ga0074048_100581581	3300006581	Soil	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQV
Ga0074060_100111152	3300006604	Soil	VSEAEGHLSVATKDIVEWTQAFVRHASPQTGRFEHEPQVQSFIAEQVVPLVQALGLPWRR
Ga0074062_100282942	3300006606	Soil	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEQVMPLVQALGLPWRR
Ga0066653_106297182	3300006791	Soil	MVSQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIADTIAPLLQELALPWRLRL*
Ga0079221_111710882	3300006804	Agricultural Soil	VSPAAANHPQLSVPTEDVVAWTRAFVRHPSPQTEKFEYEPQVQRFI
Ga0075428_1002561211	3300006844	Populus Rhizosphere	MVNEVNAQLSVPTADIVAWARTFVRHPSPQTERFEQEPQVQSFIGEQVVPLVQKL
Ga0075428_1026477632	3300006844	Populus Rhizosphere	VSEADGHLSVATQDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAD
Ga0075421_1025420962	3300006845	Populus Rhizosphere	MVSEVNGHLGIPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIA
Ga0105251_102304132	3300009011	Switchgrass Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEQVVPLVQALGLPWRRDSMGNLL
Ga0099828_106414492	3300009089	Vadose Zone Soil	MASADPSQLEIPTADIVAWARAFVRHPSPQTERLEQEPQV
Ga0099827_102915221	3300009090	Vadose Zone Soil	MISQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELCLPWWRDARGNLLVERGPERADRSLMLMA
Ga0105250_106212471	3300009092	Switchgrass Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFIAEQVVPL
Ga0105247_101569541	3300009101	Switchgrass Rhizosphere	VSEADGHLSVATQDIVEWTQAFVRHPSPQTERFEREPQVQSFITEQVVPLVQAFGLPWRRDSMGNLL
Ga0105243_100538844	3300009148	Miscanthus Rhizosphere	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFITE*
Ga0105238_110244041	3300009551	Corn Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFIAEQVVPLVQALG
Ga0126380_108453812	3300010043	Tropical Forest Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHEPQVQSF
Ga0126380_121663532	3300010043	Tropical Forest Soil	MMVSKTEGRLGVPDKSIVEWTRAFVRHPSPQTERFEQAPQVQSFIGERVVPLV
Ga0126384_117873962	3300010046	Tropical Forest Soil	MVSQVNEHLSIPTEHIVEWTRAFVRHPSPQTERFEHE
Ga0126382_103757451	3300010047	Tropical Forest Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHE
Ga0126373_121893971	3300010048	Tropical Forest Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQEL
Ga0134070_102851912	3300010301	Grasslands Soil	MVSQVNEHLGVPTKHIVEWTRAFVRHPTPQTERFEHEPQVQSFIGERVVP
Ga0126376_116178281	3300010359	Tropical Forest Soil	MASKTEGRLGVPDKSIVEWTRAFVRHPSPQTERFEQEPQVQSFIGERVVP
Ga0126376_125149902	3300010359	Tropical Forest Soil	MVSQVNEPLSIPTKHIVEWTRAFVRHHSPQTERFEHEPQVQSFIG
Ga0126372_104581953	3300010360	Tropical Forest Soil	MADRNQLGVSTADLVAWTQGFVRHPSPQTERFEQEPQVQSFIGEQVVPLVQ
Ga0126372_106359072	3300010360	Tropical Forest Soil	MVSQVNEHLGIPTKHIVEWTRAFVRHPSPQTEHFEHEPQVQSFIGERVVPLVQELGLPWR
Ga0126372_114235362	3300010360	Tropical Forest Soil	MGNGMAAQLGIPQDDIVAWTRAFVRHPSPQTEKFEYEPQVQSFITEQVV
Ga0126378_109640242	3300010361	Tropical Forest Soil	MMVSKTEGRLGVPDKSIVEWTRAFVRHPSPQTERFEQEPQVQTFIGERVVPLVQELGLP*
Ga0126378_124359361	3300010361	Tropical Forest Soil	MVSEADGRLSIPTADIVEWTRAFVRHPSPQTEHFEQEPQVQSFIGDAVVPLLQRLGLPWRRDPMGNLLVE
Ga0126378_132965462	3300010361	Tropical Forest Soil	MVSQVNKHLSIPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERV
Ga0126379_111166141	3300010366	Tropical Forest Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELGL
Ga0126379_120698571	3300010366	Tropical Forest Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVPLVQELGLPWRRDPMGNLLV
Ga0126379_123210482	3300010366	Tropical Forest Soil	MVSQVNECLGIATKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIG
Ga0126381_1011953321	3300010376	Tropical Forest Soil	MTSAASRHLGVSTEELVAWTQSFVRHPSPQTERFEQEPQVQSLIGETIAPLL
Ga0126383_103832741	3300010398	Tropical Forest Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHEPQV
Ga0126383_122622701	3300010398	Tropical Forest Soil	MVSRVNEHLGIPTEHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQEL
Ga0126383_125716302	3300010398	Tropical Forest Soil	MMVSKTEGRLGVPDKSIVEWTRAFVRHPSPQTERFEQEPQVQSFIGERVVPLVQE
Ga0134121_102123302	3300010401	Terrestrial Soil	VSEADGHLSVATRDIIEWTQAFVRHPSPQTERFEREPQVQSFIAEQVVPLVQALGLPWRR
Ga0151489_10287821	3300011106	Soil	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFITEQVVPLVQALGLPWRRDPMGNLLVEL
Ga0105246_104071632	3300011119	Miscanthus Rhizosphere	VSEADGHLSVATQDIVEWTQAFVRHPSPQTERFEHEPQV
Ga0105246_106186492	3300011119	Miscanthus Rhizosphere	LSVPTNDIVEWTRAFVRHPSPQTERFEHEPQVQRFIAEQVVPLVQALGLPWRRDPMGNLLVEL
Ga0137391_112019922	3300011270	Vadose Zone Soil	MASADPSQLEIPTADVVEWTRAFVRHPSPQTERFEEEPQVQSF
Ga0137393_113038252	3300011271	Vadose Zone Soil	MVNEVNAHLGIPTADIVAWTQAFVRHPSPQTEHFEQEPQVQSFIGEQVVPLVQKLGL
Ga0137388_110378891	3300012189	Vadose Zone Soil	VGKADHNHLSVPTNDIVEWTRAFARHPSPQTERFEQEPQVQSF
Ga0137362_114577591	3300012205	Vadose Zone Soil	MVSQVNEHVGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERV
Ga0150985_1066224835	3300012212	Avena Fatua Rhizosphere	VREADGHLSVATRDIVQWTQAFVRHASPQTERFEHEPQVQSFIAEQVVPLVQALGLPWR
Ga0137369_104548652	3300012355	Vadose Zone Soil	MAVQLGIPQDDIVAWTRAFVRHPSPQTEKFEYEPQVQSFITEQVVPLTAKLVLPARRD
Ga0137390_116040491	3300012363	Vadose Zone Soil	MASADPSQLEIPTADVVEWTRAFVRHPSPQTERFEEEPQ
Ga0150984_1037595172	3300012469	Avena Fatua Rhizosphere	VGEADRHLSVAIQDIVEWTQAFVRHPSPQTERFEHEPQVQ
Ga0137397_104721601	3300012685	Vadose Zone Soil	MASADHSQLEIPTADIVAWTRAFVRHPSPQTERFEQEPQVQSFIGEQVVPLLQKLGLP
Ga0137407_123589032	3300012930	Vadose Zone Soil	MVSQVDEHLGIPTKHIVEWTRAFVRHPSPQTERFEH
Ga0164300_109560242	3300012951	Soil	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEQVVPLV
Ga0126369_129559252	3300012971	Tropical Forest Soil	MVSQVNERLGIATKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQEL
Ga0164308_114170061	3300012985	Soil	MISQVNERLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFI
Ga0164304_102816211	3300012986	Soil	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFI
Ga0164306_116896081	3300012988	Soil	MISQVNERLGIPTKHIVEWTRVFVRHPSPQTERFEHEPQVQSFIAEQVVPLVQAL
Ga0182041_109604491	3300016294	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVP
Ga0182041_111513232	3300016294	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVP
Ga0182038_108744981	3300016445	Soil	MVSQVNERLGIATKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERV
Ga0163161_117431741	3300017792	Switchgrass Rhizosphere	VSEASGHLSVPTNDIVEWTRAFVRHPSPQTERFEHEPQVQRFIAEQLVPLVQALGLPWRRDPMGNLL
Ga0184634_102413311	3300018031	Groundwater Sediment	MANEETGHLSVSTKDIVGWTRAFVRHPSPQTERFEHEPQVQSFIAEQVVPLVQSLGLPW
Ga0066667_104035072	3300018433	Grasslands Soil	MVSQVNEHLGIPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQ
Ga0190269_105223083	3300018465	Soil	MGNHVVSEANGHLSVATKDIVEWTQAFVRHPSPQTGRFEREPQVQSFIAEQVVPLV
Ga0190270_123634211	3300018469	Soil	MANEETRHLSVPTKDIVAWTRAFVRHPSPQTERFEHEPQVQSFISEQVVPL
Ga0193756_10426941	3300019866	Soil	MANEETGHLSVPTKDIVAWTRAFVRHPSPQTERFEHEPQVQSFISEQVLPLAQSLGLPLRRDPMGNLL
Ga0193755_10776372	3300020004	Soil	MANEETGHLSVPTKDIVAWTRAFVRHPSPQTERFEHEPQVQSFISEQV
Ga0210404_101285343	3300021088	Soil	MQAAEGRLTVPAREIVQWARAFVRHPSPQTERFEQEPQVQSFVGEAVVPLVNQLGLPWRRDEM
Ga0210384_102850743	3300021432	Soil	MQAADDRLTVPASEIVQWARAFVRHPSPQTERFEQEPQVQSFVGEAVVPLVNQLGLPWR
Ga0126371_114097211	3300021560	Tropical Forest Soil	MVSEADGRLSIPTADIVEWTRAFVRHPSPQTEHFEQEPQVQSFIGD
Ga0126371_118697601	3300021560	Tropical Forest Soil	MVSQVNEHLGIATKDIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQE
Ga0222623_102160491	3300022694	Groundwater Sediment	MASADHSQLTVPTADMVAWARTFVRHPSPQTERFEQEPQVQSFIGEQVVPLLQKLKLPWRRD
Ga0207644_110011831	3300025931	Switchgrass Rhizosphere	VSEASGHLSVPTNDIVEWTRAFVRHPSPQTERFEHEPQVQRFIAEQVVPLVQALGLPW
Ga0207668_105983131	3300025972	Switchgrass Rhizosphere	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEHE
Ga0207981_10591792	3300027560	Soil	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFVSEAIVPLVNQLGMPSRLDGM
Ga0209590_101658121	3300027882	Vadose Zone Soil	MISQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPL
Ga0209275_103378332	3300027884	Soil	MHHADDPRLSVPASEIVKWARAFVRHPSPQTERFEQEPQVQSFVSEAIVPLVNQLGMPS
Ga0307276_101820882	3300028705	Soil	MGNHVVSEANGHLSVPTKDIVEWTRAFVRHPSPQTERFEHEPQVQSFIAEQVVPLVQSLGLPWRRDPMGNLLV
Ga0307299_100738052	3300028793	Soil	MANEETGHLSVSTKDIVGWTRAFVRHPSPQTECFEHEPQVQ
Ga0307296_102547292	3300028819	Soil	VGEADGHLSVATQDIVEWTQAFVRHPSPQTERFEHEPQVQGFIAE
Ga0307310_101221002	3300028824	Soil	VGEADGHLSVATQDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEEVVPLVQALGLPWR
Ga0247826_112193382	3300030336	Soil	VSEADGHLSVATQDIVEWTQAFVRHPSPQTERFEREPQVQSFITE
Ga0307501_101776681	3300031152	Soil	VREADGHLSVATRDIVQWTQAFVRHASPQTERFEHEPQVQSFIAEQVVPLVQALGLPWRRDSM
Ga0170824_1281104062	3300031231	Forest Soil	MANEETRHLSVPTKDIVAWTRAFVRHPSPQTERFEHEPQVQSFISEQVVPLVQSLG
Ga0307506_103148561	3300031366	Soil	VSEAEGHLSVATKDIVEWTQAFVRHPSPQTERFEREPQVQSFITEQVVPLVQALGLPWRRDSMGNLLVELGPER
Ga0170818_1108447382	3300031474	Forest Soil	MANEETGHLSVPTKDIVAWTRAFVRHPSPQTERFEHEPQVQSFISEQVVPLVQSLG
Ga0318516_100684961	3300031543	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVPL
Ga0318534_101058192	3300031544	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERV
Ga0318538_103965381	3300031546	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVPL
Ga0318571_102717321	3300031549	Soil	MVSKTEGRLGVPDKSIVEWTRAFVRHPSPQTERFE
Ga0310915_102160112	3300031573	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGE
Ga0318542_105343872	3300031668	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEH
Ga0318560_103917522	3300031682	Soil	MVGQVNEPLGIPTEQIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQALGL
Ga0318493_102693731	3300031723	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPEVQS
Ga0318501_101071172	3300031736	Soil	LAVATSDIVQWTRAFVRHPSPQTERFEHEPQVQSFIGATVIPLLQQLSLPTRREEMGNVLIERG
Ga0318501_105824362	3300031736	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQS
Ga0318492_104550211	3300031748	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELGLPWRRDPMG
Ga0318546_100189614	3300031771	Soil	MPDDHRLAVATSDIVQWTRAFVRHPSPQTERFEHEPQVQ
Ga0318498_104419302	3300031778	Soil	MPDDHRLAVATSDIVQWTRAFVRHPSPQTERFEHEPQV
Ga0318552_100482693	3300031782	Soil	LAVATSDIVQWTRAFVRHPSPQTERFEHEPQVQSFIGAT
Ga0318529_104313842	3300031792	Soil	MVSQVNEHLRIPTKHIVEWTRAFVRHPSPQTERFEHEPQV
Ga0318548_105843972	3300031793	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHE
Ga0318557_100305483	3300031795	Soil	LAVATSDIVQWTRAFVRHPSPQTERFEHEPQVQSFIGATVIPLLQQLSLPTRRD
Ga0318557_102302712	3300031795	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVPLVQELGLPWRRDPMGNLL
Ga0318576_101202501	3300031796	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFI
Ga0318565_100249611	3300031799	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSF
Ga0318568_102440172	3300031819	Soil	LAVATSDIVQWTRAFVRHPSPQTERFEHEPQVQSF
Ga0307473_105643162	3300031820	Hardwood Forest Soil	MVSQVNEHLGVPTKHIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQEL
Ga0318564_101468022	3300031831	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGER
Ga0310917_105060221	3300031833	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVVPLVQELGLPWRRDPMGNLL
Ga0318517_100237461	3300031835	Soil	MVGQVNEPLGIPTEQIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQALGLPWR
Ga0318512_100679741	3300031846	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGERVGPLVQELGLPWRRDPMGNL
Ga0318512_101447612	3300031846	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIG
Ga0318527_100118824	3300031859	Soil	MVGQVNEPLGIPTEQIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQALSLPWRRDA
Ga0318495_100067671	3300031860	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIGER
Ga0306921_112292772	3300031912	Soil	MQERLDHNPRLAISTSTLVEWTRAFVRHPSPQTELFEREPQVQSFIAERIVPLLQELALPWRRDGMGNVLVELGP
Ga0310913_100857663	3300031945	Soil	MVSKTEGRLGVPDKSIVEWTRAFVRHPSPQTERFEQEPQVQSFIGE
Ga0318530_101115902	3300031959	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHE
Ga0318530_102560731	3300031959	Soil	MVGQVNEHLYIPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQELGLP
Ga0318569_104127851	3300032010	Soil	MVGQVNEPLGIPTEQIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQALGLPW
Ga0318559_101297822	3300032039	Soil	MVSQVNEHLGIPTKQIVEWTRAFVRHASPQTERFEHEPQV
Ga0318558_103414082	3300032044	Soil	MVGQVNEHLGIPTKQIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVV
Ga0318506_101044891	3300032052	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSF
Ga0318575_101547701	3300032055	Soil	MVGQVNEHLCIPTKQIVEWMRAFVRHASPQTERFEHEPQVQSFIGERVVPL
Ga0318510_100215591	3300032064	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPEVQSFIGERVVPLVQELGLPWRRDPMGNLLVEL
Ga0318514_100271131	3300032066	Soil	MVGQVNEHLCIPTKQIVEWTRAFVRHASPQTERFEHEPQVQSFIG
Ga0318514_101662422	3300032066	Soil	MVGQVNEPLGIPTEQIVEWTRAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQALGLR
Ga0318518_101052101	3300032090	Soil	VRTIDHPQLVVPTADLVAWTRAFVRHASPQTERFEQEPQVQSFIGEQMAPL
Ga0318540_102970471	3300032094	Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHEPQVQRF
Ga0310895_103296351	3300032122	Soil	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAQQVV
Ga0307470_105472472	3300032174	Hardwood Forest Soil	VSEADGHLSVATKDIVEWTQAFVRHPSPQTERFEHEPQVQSFIAEQV
Ga0306920_1005501041	3300032261	Soil	MVGQVNEHLYIPTKHIVEWTQAFVRHPSPQTERFEHEPQVQSFIGERVVPLVQEL
Ga0306920_1034324722	3300032261	Soil	MVSQVNEHLGIPTEHIVEWTRAFVRHPSPQTERFEHEPQVQRFIGE
Ga0306920_1043383811	3300032261	Soil	MVCVDDNRLSVSTADLIEWTRAFVRHPSPQTERFEQEPQVQSFIGERIVPLAQKLALP
Ga0247829_115341392	3300033550	Soil	VSEADEHLSVATQDIVEWTQAFVRHPSPQTERFEHEPQVQSFITEQVVPLVQALGLP
Ga0364925_0117318_825_953	3300034147	Sediment	LDHEQLDHKQLSLTTADIVEWTRAFVRHASPQTERFEDEPQVQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036320

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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