NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F035100

Metagenome / Metatranscriptome Family F035100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F035100
Family Type Metagenome / Metatranscriptome
Number of Sequences 173
Average Sequence Length 58 residues
Representative Sequence MVEIRVAVADATHVPGLMRRLAGLFDRSSVSFDRTRKEVRVTSEWESRSVVHVVDAVEA
Number of Associated Samples 145
Number of Associated Scaffolds 173

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 94.22 %
% of genes from short scaffolds (< 2000 bps) 89.60 %
Associated GOLD sequencing projects 131
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (69.942 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(13.873 % of family members)
Environment Ontology (ENVO) Unclassified
(26.590 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.555 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.
1FACENCA_5916470
2OU_00846900
3OU_01687320
4KansclcFeb2_02220880
5FE2_00538670
6JGI1027J12803_1033621724
7JGI1027J12803_1088378441
8JGI10216J12902_1003358411
9JGI10216J12902_1021483892
10JGI10216J12902_1154882551
11JGI10220J13317_109643162
12A2065W1_101990001
13A10PFW1_105171903
14Ga0062590_1015905071
15Ga0062592_1015581062
16Ga0062594_1019306162
17Ga0062594_1027097091
18Ga0066683_101943772
19Ga0066673_105583871
20Ga0066684_100828935
21Ga0066684_103146942
22Ga0066685_105721822
23Ga0066675_109882802
24Ga0066675_110677202
25Ga0065705_105503601
26Ga0070658_112946192
27Ga0070680_1010149351
28Ga0070674_1005338173
29Ga0070714_1002820801
30Ga0070714_1009249011
31Ga0070714_1020584291
32Ga0070701_106631722
33Ga0070711_1005634241
34Ga0070708_1018012191
35Ga0070681_100553001
36Ga0070707_1007641172
37Ga0070698_1006108511
38Ga0070699_1004108621
39Ga0070699_1019717392
40Ga0070699_1021319782
41Ga0070741_101330575
42Ga0070679_1003782112
43Ga0070739_100924531
44Ga0070739_102451491
45Ga0070739_103276232
46Ga0070697_1003496742
47Ga0070697_1011202771
48Ga0070697_1019862082
49Ga0068853_1020292462
50Ga0070696_1001031254
51Ga0070693_1008850951
52Ga0070704_1002055273
53Ga0066695_101741261
54Ga0066695_106377822
55Ga0066707_106498121
56Ga0070664_1014602481
57Ga0068856_1003451611
58Ga0068870_102507761
59Ga0075275_10575241
60Ga0066652_1017909281
61Ga0075432_105372612
62Ga0075017_1005032581
63Ga0070715_103537342
64Ga0070716_1000571104
65Ga0070716_1001376951
66Ga0070716_1016008131
67Ga0097621_1008553372
68Ga0068871_1024000922
69Ga0074060_120068311
70Ga0075522_102879081
71Ga0079222_115487332
72Ga0079221_105271522
73Ga0079221_112702811
74Ga0079220_106837641
75Ga0075433_100752426
76Ga0075425_1006978831
77Ga0075434_1005615061
78Ga0075434_1026293691
79Ga0073928_108307221
80Ga0075424_1005934302
81Ga0075424_1023717991
82Ga0075436_1013487041
83Ga0079219_112061572
84Ga0105240_100677821
85Ga0105240_125239102
86Ga0105243_123353102
87Ga0105242_104339591
88Ga0105237_121152381
89Ga0105058_10947441
90Ga0134082_105085921
91Ga0134084_102381442
92Ga0134064_104020042
93Ga0134125_116499952
94Ga0137389_106603922
95Ga0137380_108139572
96Ga0137376_102518051
97Ga0137378_112510732
98Ga0137370_104592592
99Ga0137372_110097672
100Ga0137366_102974011
101Ga0137384_110343992
102Ga0157352_10806401
103Ga0157308_103183981
104Ga0162651_1000796991
105Ga0164302_1000134210
106Ga0157371_115625091
107Ga0157370_120423092
108Ga0157372_109174802
109Ga0134078_101401821
110Ga0157376_110569451
111Ga0134073_103536112
112Ga0134073_104272772
113Ga0132258_125138893
114Ga0132256_1009131942
115Ga0132255_1034046471
116Ga0132255_1037245052
117Ga0187822_100578381
118Ga0184605_104646521
119Ga0184619_102521602
120Ga0184611_11815021
121Ga0066667_118399391
122Ga0173481_104758732
123Ga0173482_101431082
124Ga0173479_102433631
125Ga0197907_100161331
126Ga0154015_11022772
127Ga0154015_11343531
128Ga0210382_102060591
129Ga0210402_108513322
130Ga0212123_106560441
131Ga0247672_10055634
132Ga0208563_11072481
133Ga0208356_10628741
134Ga0207692_101197681
135Ga0207692_105204682
136Ga0207705_109887392
137Ga0207707_104717622
138Ga0207693_112879901
139Ga0207660_110570122
140Ga0207649_112134381
141Ga0207652_103594541
142Ga0207646_111089112
143Ga0207664_107784512
144Ga0207665_112598581
145Ga0207679_114423841
146Ga0207639_116614161
147Ga0207708_113116042
148Ga0207702_112046201
149Ga0207648_114858951
150Ga0207698_109640321
151Ga0209027_10517671
152Ga0209027_13120582
153Ga0209153_10247673
154Ga0209266_11957431
155Ga0209057_11569361
156Ga0257156_11194242
157Ga0209577_106472522
158Ga0207582_10211482
159Ga0207540_1020141
160Ga0209810_10932231
161Ga0209810_11846541
162Ga0247685_10202032
163Ga0307311_101681792
164Ga0307320_100539251
165Ga0265338_105917221
166Ga0307305_102730292
167Ga0307308_104202111
168Ga0307497_100039301
169Ga0307418_10842512
170Ga0265313_100250004
171Ga0310890_106750961
172Ga0307471_1032814691
173Ga0247829_103347132
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.18%    β-sheet: 18.39%    Coil/Unstructured: 49.43%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MVEIRVAVADATHVPGLMRRLAGLFDRSSVSFDRTRKEVRVTSEWESRSVVHVVDAVEASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
69.9%30.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Peatland
Freshwater Sediment
Salt Marsh
Iron-Sulfur Acid Spring
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Grass Soil
Surface Soil
Unplanted Soil
Switchgrass Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Agricultural Soil
Arctic Peat Soil
Permafrost
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Rice Paddy Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Groundwater Sand
Soil
Arabidopsis Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
5.8%4.6%3.5%3.5%3.5%2.9%12.1%13.9%3.5%2.9%4.6%2.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACENCA_59164702035918004SoilMVEIRVAVADAAGAQGLLRRLAAVLERSSVSFDGGRNEVRVRSEWESRSVVQVICAVESWLAADGVD
OU_008469002124908016MVEIRVAVPDDTGGHGLMRRLAGLFDRSSVSFDGVQRESAFARSGSR
OU_016873202124908016VVEIRVVVDESTHALGLIRRLVNLFDRTAVSFDSSRREVVVTSEWESRSVVHVIDAVEAWLAEEG
KansclcFeb2_022208802124908045SoilMVEIRVAVADAAGAHGLLRRLTALFDRSSVSFDGMRNEVRVHS
FE2_005386702189573003Grass SoilMVEIRVAVPDATRVHGLMRRLGGLFDRSSVSFDGTRSEVQVRSEWES
JGI1027J12803_10336217243300000955SoilMVEIRVAVPDDTCGHGLMRRLVGVFDRSSVSFDGPQREVRVRSEWESRSVVQVLGAVES
JGI1027J12803_10883784413300000955SoilMVEIRVAVPDDTYGHGLMCRLAGLFDRSSVSFDGVQREVRVRSEWESRGVVRVLGAVESWLAE
JGI10216J12902_10033584113300000956SoilMVAIRRAVADAAGAHGLLRRLVELFDRASVSFDGTRNEVRVNSEWESRSVVEVISTVESWLAADGIDSAKL
JGI10216J12902_10214838923300000956SoilLVEIRVGVDDATRAYGLMRRLAVLFDRSAISFDRSRTEVRVTSEWESRGVVQVIDAVEAW
JGI10216J12902_11548825513300000956SoilMVEIRVAVADATGVHTLLRRLAGVFDRSSVSFDGRRKEVRVRS
JGI10220J13317_1096431623300001139SoilMVEIRVAVPDATSVHGLMRCLAGLFDRSSVSFDGAHGEVHVRSEWESRGVVQVLGAVESWLAEDGPD
A2065W1_1019900013300001537PermafrostMVEIRVAVADGTVAQALMLRLVGHFDRSCVSIDWVRNEVRIRSEWESRAVV
A10PFW1_1051719033300001538PermafrostMVEIRVAVADGTVAQALMLRLVGHFDRSCVSIDWVRNEVRIRSEWESRAVVDVIGTV
Ga0062590_10159050713300004157SoilMVEIRVAVADATGVHTLLRRLAGVFDRSSVSFDGRRKEVRVRSSESRTVVLVLDAVEAWLAEDGAGSAKLSL
Ga0062592_10155810623300004480SoilMVEIRVAVADVARAPGLLRRLRALFDRSSVSFDALRNEVTVHSEWESRSIVQVIAAVQSWLTADGIDSAT
Ga0062594_10193061623300005093SoilMVEIRVAVADATHVPGLMRRLAGLFDRSSVSFDRTRKEVRVTSEWESRSVVHVVDAVEAWLAENDANSATL
Ga0062594_10270970913300005093SoilMVEIRVAVADATRVHTLVRRLSGVFDRSSVSFDGRRKEVSVRSESEWRTVALVLDAVEAWLAEDGAGS
Ga0066683_1019437723300005172SoilMVEIRVAVTDATRIHGLMSRLGRLFDGSSVSFDGARGEVRVRSEWGSRSVVEVIDAVQS
Ga0066673_1055838713300005175SoilMVEIRVKVDDDTRVHGLMRRLAALFGRSAISFDGSRNEVRVESEWESRGVVHVIDAVEAWIEEDGGTWA
Ga0066684_1008289353300005179SoilMVEICVGVAEGGGVHGLMRRLTGVFDRSSVSFDGARKEVRVRSEWESRAVVQVVGAVEEWLVE
Ga0066684_1031469423300005179SoilMVEIRVAVADDTRVPGLMRRLAGLFDRSSLSFDGSRKEVRVTSEWESRSVVHVVDAVA
Ga0066685_1057218223300005180SoilMVEIRVAVDDATRAHGLMRRLAALFDRSAISFDRSRKEVRVKSEWESRGVVHVVDAVEAWIEEDGGNWAV
Ga0066675_1098828023300005187SoilMVEIRVGVAEAGGVHGLIQRLVGVFDRSSVSYDGTRKEVHVRSEWESRGVVQVL
Ga0066675_1106772023300005187SoilMVEICVAVDDRTRVSGFMWRLAGLFDRSSLSFDRSRNEVKVTSEWESRGVVHVVDAVEAWLAEDG
Ga0065705_1055036013300005294Switchgrass RhizosphereMVEIRVAVPDDTCGHGLMRRLVGLFDRSSVSFDGAQKEVRVRSEWESRSVVQVLGAVESWLAEDGPDSAKL
Ga0070658_1129461923300005327Corn RhizosphereMVEIRVSVPDAAGAHGLLARLAALFDRSAVSFDGRNEVLVRSEWESRSV
Ga0070680_10101493513300005336Corn RhizosphereMVEIRVAVTDAARAHGLLRRLTTLFGRSAVSFDGLRNEVQVKSEWESRSVVEVIDVVQSWLTADGVDSARLAVGDR
Ga0070674_10053381733300005356Miscanthus RhizosphereMEEICVGVADADGAQGLLQRLAAIFDRSSVSFDATRNQVRVRSDRESRSVVRVIDAVQSWLA
Ga0070714_10028208013300005435Agricultural SoilMVEIRVAVPDAGTAHGLLRRLANLFGRSAIAFDGTRNEVKVKSDWESRSVVGVIEAVQAWLVADHIDSVKL
Ga0070714_10092490113300005435Agricultural SoilMVEIRVALSGAAEAQGLLQRLAALFGRSSLSFDETRNEVRVRSEWESRSVVEVIDTVQSWLAADGVG
Ga0070714_10205842913300005435Agricultural SoilMVEIRVAVPDAGMAHGLLRRLSSVFGRSAIAFDGTHNEVSVKSEWESRSVVGVIEAVQDWLVSDQIE
Ga0070701_1066317223300005438Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSVVHVV
Ga0070711_10056342413300005439Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSV
Ga0070708_10180121913300005445Corn, Switchgrass And Miscanthus RhizosphereMVEICVAVAEPARADGLMQALAGLFGHASVSFDSARSEVRVRSEWESRAVIHVIDAVEGWLAADDLVSA
Ga0070681_1005530013300005458Corn RhizosphereMVEIHVAVTDAARAHGLLRRLTTLFGRSAVSFDGLRNEVQVKSEW
Ga0070707_10076411723300005468Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADGTAVHGLVRRLTGVFDGPSVFFDATRGEVRVRSEWESRSVVQ
Ga0070698_10061085113300005471Corn, Switchgrass And Miscanthus RhizosphereMVEICVAVAEPACADGLMQALARLFGRASVSFDSARSEVRVRSEWESRAVIHVIDAVEGWLA
Ga0070699_10041086213300005518Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLARLFDRSSLSFDRTRKEVRVTSEWESRSVVHVVDAVAAW
Ga0070699_10197173923300005518Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVPDATRGHGLVRRLAGLFDRSSVSFDGAHREVRVRS
Ga0070699_10213197823300005518Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATTVHGLVRRLTGLFDPPSVSFDATRGEVRVRSEWESRSVVQVI
Ga0070741_1013305753300005529Surface SoilMVEIRVAVTDADRVHGLLRRLAALFDRSALSFDGSCNEVRIASEWESRSVVQVIDVVQSWLSAEGAD
Ga0070679_10037821123300005530Corn RhizosphereVVEIRVAVPDAAQAHGLLARLAALFGRSSVSFDGMHHEIRVSSEWESRSVVAVIDAVQSWLA
Ga0070739_1009245313300005532Surface SoilMVEIRVAAPDVAEADGLLARLGALFGRSSVFFDEARNEIRVRSEWESRSVVAVIEAVQSWLAAVGVDSAKLSM
Ga0070739_1024514913300005532Surface SoilMVEIRVAVTDAARVHGLMRRLSRLFDRSSVAFDGRQREVRVHSEWES
Ga0070739_1032762323300005532Surface SoilMVEVCVAVPDVAEADGLLARLAALFGRSAVFFDGARNEIRVRSEWESRSVVAVIEAVQSWLAAVGVDSAKLSM
Ga0070697_10034967423300005536Corn, Switchgrass And Miscanthus RhizosphereMVEIRVSVADAARVPGLMRQLAGLFGRSSLSFDRSRKEVRVTSEWE
Ga0070697_10112027713300005536Corn, Switchgrass And Miscanthus RhizosphereMIEIRVVVADTERADGLLRRLTAFFDRSSVSFDGTRNEVRVRSESESRSVVDVIAAVQSWLAADGVG
Ga0070697_10198620823300005536Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVDDATRVHGLMRRLAALFERSAISFDPSRKEVRVTSEWESRGVVQVIDAVEAWIEEDDGGCAVL
Ga0068853_10202924623300005539Corn RhizosphereMVEIRVSVADATRVPGLMRQLAGLFDRSSLSFDRSRKEVRVTSEWE
Ga0070696_10010312543300005546Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVPDDTCGHGLMRRLAGVFDRSSVSFDRVQSEVRVHSKWES
Ga0070693_10088509513300005547Corn, Switchgrass And Miscanthus RhizosphereMVEIRVSVADAARVPGLMRQLAGLFDRSSLSFDRSRKEVRVTSEWESRSVVHVVDAVATWLAEN
Ga0070704_10020552733300005549Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSVVHVVDAVAAWLAENDGDSATLS
Ga0066695_1017412613300005553SoilMVEIRVAVPDVTRVQGLMRRLAGLFDRSSVSFDVAQREVLVRSE
Ga0066695_1063778223300005553SoilMVELRVGVDDATRALGLMRRLSALFGRSAISFDRSRNEVRVESEWESRAVVHVFDALQAWID
Ga0066707_1064981213300005556SoilVEIRVAVADAAGAHGLLRLLAAVFDRSSVSFDGRRNEVRVRSEW
Ga0070664_10146024813300005564Corn RhizosphereMVEICVAVTDAKRIHGLMRRLGTLFDRSSVSYDGARREVRVRSEWESRS
Ga0068856_10034516113300005614Corn RhizosphereLVEIRVGVDDATRAYGLMRRLAVLFDRSAISFDRSRTEVRVTSEWESRGVVQVIDAVEAWIEEDGGTRAVL
Ga0068870_1025077613300005840Miscanthus RhizosphereMVEIRVSVADAARVPGLMRQLAGLFDRSSLSFDRSRKEVRVTSEWESRSVVHVVDAVAAW
Ga0075275_105752413300005892Rice Paddy SoilMVEIRVAGVDATVAHELMRRLAGLFDRSSVSFDGARNEVHVRSEWESRSVVRVIDTVEAWLASYGVGSATLSIG
Ga0066652_10179092813300006046SoilMVEIRVAVADATGVHGLVRRLARVFDRSSVSFDGARKEVRVRSDWESRSVVRVLEAVEAWLAE
Ga0075432_1053726123300006058Populus RhizosphereMVEIRVAVADLAVAEGLVQRLAGLLTESSVSVDDTHNEVRVRSRWDSRAVVEVI
Ga0075017_10050325813300006059WatershedsMVEIRVAVTDATRIHGLMRRLGRLFERSSVSFDGARGEVRVRSEWESRSVVEVIDAVQ
Ga0070715_1035373423300006163Corn, Switchgrass And Miscanthus RhizosphereMVEICVAVTDPKRIHGLMRRLGTLFDRSSVSYDGARREVRVRSEWESRSVVEVIDAVQSWLEADGLGSAKL
Ga0070716_10005711043300006173Corn, Switchgrass And Miscanthus RhizosphereMVEIRVGVADAEGVHGLIRRLAGVFDRSSLSYDGARKEVHVRSEWESRGV
Ga0070716_10013769513300006173Corn, Switchgrass And Miscanthus RhizosphereMVEICVAVDDRTRVSGLMWRLAGLFDRSSLSFDRSRNEVKVTSEWESRGVVHVVDAVEAW
Ga0070716_10160081313300006173Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVPDATPVHGLMRRLGRLFDRSSVSFDAMRKEVRVRSEWE
Ga0097621_10085533723300006237Miscanthus RhizosphereMVEIRVAVPDDTCGHRLMRRLAGVFDRSSVSFDRV
Ga0068871_10240009223300006358Miscanthus RhizosphereMVEIRVAVTDATRVHGLMRRLGGVFDGSAVSFDGTRGEVQVRSEWESRSLVQVLG
Ga0074060_1200683113300006604SoilMVEIRVAVTDATRLHGLMRRLGRLFDRSSVSFDTTRGEVQVRSEWESRGLVHVLGAVESWLEEDGPDSARLS
Ga0075522_1028790813300006638Arctic Peat SoilVEIRVSVANATGANRLVRRLARLLDRSSVSFDDARNEVRVRSEELRAVFQVIGAVESWLAEDRGGSAEVS
Ga0079222_1154873323300006755Agricultural SoilVVEIRVAWSAAVAADGLLRRLATLFEPSSVSFDELRNEVRVRSEWES
Ga0079221_1052715223300006804Agricultural SoilMVEIRVAVSETAEAEGLLRRLAPLFGRSSLSFDERRHEVRVRSEWESRSVVDVIDTVQSWLVADGVDSAELSVGD
Ga0079221_1127028113300006804Agricultural SoilVVEIRVGVDDATRVHGLMRRLALLFDRSAISFDRARTEVRVTSEWESRGVVQVIDA
Ga0079220_1068376413300006806Agricultural SoilMVEICVAVVDPTRAHGLMRRLAELFGRSSVSFDRSRSEVRVRSEWESRAVMEVIDMVDR
Ga0075433_1007524263300006852Populus RhizosphereMVEIRVSVADAARVPGLMLQLAGLFDRSSLSFDRSRKEVRVTSEWESRSVVHVV
Ga0075425_10069788313300006854Populus RhizosphereMVEICVAVAEPACADGLMQALARLFGRASVSFDSARSEVRVRSEWESRAVIHVIDAVEGWLAAD
Ga0075434_10056150613300006871Populus RhizosphereMVEIRVAVPDATGVHGLMRRLSELFDRSSVSFDGMQREVRVCSEWE
Ga0075434_10262936913300006871Populus RhizosphereMVEICVAVADTTRVPGLMLRLAGLFDRSSLAFDRSRKEVRVTSEWESRSVVHVVDAVAAWLAE
Ga0073928_1083072213300006893Iron-Sulfur Acid SpringMVEIRVPVTDATRIHGLMHRLGTLFDRSSVSYDGARREVRVRSEWESRSVVAVIDA
Ga0075424_10059343023300006904Populus RhizosphereMVEIRVTVDDDMSVHGLMRRLAALFGRSAISFDHSHNEVRVESEWESRALVGVIEAVEAWIDEVGGKGAR
Ga0075424_10237179913300006904Populus RhizosphereMVEIRVVVTDAARAHGLLRRLVALFDRASVSFDGTRNEVRVCSEW
Ga0075436_10134870413300006914Populus RhizosphereLVEIRVAVPDAAEAHGLLSRLAALFDRSAVSFDGTRNEVRVRSEWESRSVVAVIDAVQSWLAADGV
Ga0079219_1120615723300006954Agricultural SoilVVEIRVGVDDATRVHGLMRRLALLFDRSAISFDRARTEVRVTSEWESRGVVQVIDAVEAWIE
Ga0105240_1006778213300009093Corn RhizosphereMVEIRVAVTDATRIHGLMSRLGRLFDHSSVWFDGARGEVRVRSEWESRSVVAVIDAVQAWLEA
Ga0105240_1252391023300009093Corn RhizosphereMVEIRVSVPDAAGANGLLARLAALFDRSAVSFDGIRNEVRVRSEWESRSVVAVIDAVQSW
Ga0105243_1233531023300009148Miscanthus RhizosphereMVEIRVAVADATEVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSVVH
Ga0105242_1043395913300009176Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSVVHVVDAVAAWLAEND
Ga0105237_1211523813300009545Corn RhizosphereMMVEIRVAVADATHVPGLMRRLAGLFDRSSVSFDRTRKEVRVTSEWESRSVVHVVDAVEAWLAEND
Ga0105058_109474413300009837Groundwater SandMVEIRVAVADAAGAHGLLRRLAGLFDRSSVSFDGMRNEVRVCSEWESRSVVQVIGTVES
Ga0134082_1050859213300010303Grasslands SoilMVEICVAVDDRTRVSGLMWRLAGLFDRSSLSFDRSRNEVKVTSEWESRGVVH
Ga0134084_1023814423300010322Grasslands SoilMVEIRVAVTDAARVHGLMRRLGTLFDRSSVSFDPTRSEVHVRSEWGSRSVVEVIDAV
Ga0134064_1040200423300010325Grasslands SoilMVEIRVKVDDDTRVHGLMRRLAALFGRSAISFDGSRNEVRVESEWESRGVVHVIDAV
Ga0134125_1164999523300010371Terrestrial SoilMVEIRVVVTDAARAHGLLRRLVALFDRASVSFDGTRNEVRVCSEWESRSVLRVIDAVQSWLAADGVDSAELSMG
Ga0137389_1066039223300012096Vadose Zone SoilMVEIRVAVADPTGAHGLLQRLAGLFDRASVSFDGTHNEVRVRSEWESRSVIQVIAAV*
Ga0137380_1081395723300012206Vadose Zone SoilMVEICVAVADPSCAHGLMRGLAELFGRSSVSFDRSRSEVRVRSEWESRAVVEVIEVVDRW
Ga0137376_1025180513300012208Vadose Zone SoilMVEICVAVTDAARVHGLMRRLGGLFDRSSVSFDGRRSEVQV
Ga0137378_1125107323300012210Vadose Zone SoilMVEICVAVADPSCPHGLMRGLAELFGRSSVSFDRSRSEVRVRSEWESRAVVEV
Ga0137370_1045925923300012285Vadose Zone SoilMVEIRVAVADVARVHGLMRRLGGLFDRSSVSFDGRRSEVQVRSEWESRSLVQVLAAVESWLA
Ga0137372_1100976723300012350Vadose Zone SoilMVEIRVDVADGVGAHGLLRRLAPLFDGPSVSFDGARKEVRVRAEW
Ga0137366_1029740113300012354Vadose Zone SoilMVEIRVAVDEDTGVHGLMRRLAALFGRSAISFDRSRNEVRVESEWESRAVVGVLDAVEAWIDEEGGT
Ga0137384_1103439923300012357Vadose Zone SoilMVEIRVAVNDPTFVHGLMRRLGALFHPSSVSYDGVRKEVRVHAEWESRAVVGVVEAVQGWLGEA
Ga0157352_108064013300012519Unplanted SoilMVEIRVAVDDDTNLDGLVRRLAALFGQSAISFERSRNEVRIVSEWESRGVVAVIDAVEAWIDEDAG
Ga0157308_1031839813300012910SoilMVEIRVAVPDDTCGHGLMRRLAGLFDRSSVSFDGAQREVRVRSEWESRGV
Ga0162651_10007969913300012938SoilMVEIRVAVADATGAHGLVRRLAELFDWSSLSFDGACNEIRVRSEWESRAVVQVI
Ga0164302_10001342103300012961SoilMVEIRVAVPDATGVHGLMRHLGGLFERSSVSFDAKHNEVQVQSEWESRGIVQ
Ga0157371_1156250913300013102Corn RhizosphereMVEIRVAVTDATRVHGLMRRLGGVFDGSAVSFDGTRGEVQVRSEWESRSLVQVLGA
Ga0157370_1204230923300013104Corn RhizosphereVVEIRVAVPDAAQAHGLLARLAALFGRSSVSFDGMHHEIRVSSEWESRSVVAVIDSVQSWLAADGVDSAKLS
Ga0157372_1091748023300013307Corn RhizosphereMVEIRVAVTDATRIHGLMSRLGRLFDHSSVWFDGARGEVRVRSEWES
Ga0134078_1014018213300014157Grasslands SoilMVEIRVAVADATRVPGLMRRLAGLFDRSSLSFDGSRKEVRVTSEWESRSVVHVVDAVAAW
Ga0157376_1105694513300014969Miscanthus RhizosphereMVEIRVAVPDDTCGHGLMRRLAGVFDRSSVSFDRVQSEVRVHSK
Ga0134073_1035361123300015356Grasslands SoilMVEIRVAVEDVGRVSGLMRRLATIFDRSSVSFDGSRKEVRVRSEWESRGVVNVVEAVEAWLAEDGVESATLSV
Ga0134073_1042727723300015356Grasslands SoilMVEIRVGVAEAGGVHGLIQRLVGVFDRSSVSYDGTRKEVHVRSEWESRGVVQV
Ga0132258_1251388933300015371Arabidopsis RhizosphereMVEIRVAVTEARGVHGLMRRLAGVFDRSSVSFDGARKQVRVRSQSEARAVAPLLR
Ga0132256_10091319423300015372Arabidopsis RhizosphereMEVEIRVAVTDTLRVHGLVGRLAGFFDLSSVSFDDNEVRVRSEWESRAVVVVLNVV
Ga0132255_10340464713300015374Arabidopsis RhizosphereMVEIRVAVTEARGVHGLMRRLARVFDRSSVSFDRARKQVRVRSQS
Ga0132255_10372450523300015374Arabidopsis RhizosphereMVEIRVSVADAARVPGLMLQLAGLFDRSSLSFDRSRKEVRVTSEWESRSVV
Ga0187822_1005783813300017994Freshwater SedimentMVEIRVAVTDATRIHGLMRRLGRLFDRSSVLYDGARREVRVRSEWESRSVVEVIDAVQS
Ga0184605_1046465213300018027Groundwater SedimentMVEIRVAVTDPGRAHGLLRRLAGLFDRSSVSFDGTHNEVRVRSEWESRSVVEVI
Ga0184619_1025216023300018061Groundwater SedimentMVEIRVAVDDATRAPGLMRRLAGLFDRSSISFDQLRREVRVESEWESRSVVHVV
Ga0184611_118150213300018067Groundwater SedimentMVEIRVAVADATGAHGLVRRLAELFDWSSLSFDGACNEIRVRSEWESRAVVQVIDTVDWWLAAAGADSA
Ga0066667_1183993913300018433Grasslands SoilMVEICVAVADATRVPGLMRLLAGLFDRSSLSFDGSRKEVRVTSEWESRSVVHV
Ga0173481_1047587323300019356SoilMVEIRVAVPDDSSGHGLMRRLAGLFDRSSVSFDGVQREVRVRSEWESRGVVQVLGAVESWLAEDGP
Ga0173482_1014310823300019361SoilMVEIRVAVPDATSVHGLMRCLAGLFDRSSVSFDGAHGEVHVRSEWESRGVVQVLGAVESWLAEDGPDSARLSI
Ga0173479_1024336313300019362SoilMVEIRVAVPDDTYGHGLIRRLAGVFDRSSVSFDRVQSEVRVHSEWESRG
Ga0197907_1001613313300020069Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVTDATRIHGLMSRLGRLFDHSSVWFDGARGEVRVRSEWE
Ga0154015_110227723300020610Corn, Switchgrass And Miscanthus RhizosphereMVEIRVSVPNAAGANGLLARLAALFDRSAVSFDGTRNEVRVRSEWESRSVVAVIDAVQSWLATDA
Ga0154015_113435313300020610Corn, Switchgrass And Miscanthus RhizosphereMVEICVAVDDPTCAHGLMRALAGLFDRSSVSFDRTRNEVRVCSEWESRAVMEVISVVERWLAADGIAS
Ga0210382_1020605913300021080Groundwater SedimentMVEIRVAVDEGSGVHGLMRRLAALFGRSAISFDRSHNEVRVESEWESRAIVGVLDAVEARIDEEGGT
Ga0210402_1085133223300021478SoilVEICVAVPDATRVHGLINRLSRLFDGSSVLFDATRSEVQVRSEWESRGLVQVLGA
Ga0212123_1065604413300022557Iron-Sulfur Acid SpringMVEIRVPVTDATRIHGLMHRLGTLFDRSSVSYDGARREVRVRSEWESRSVVAVIDAV
Ga0247672_100556343300024187SoilMVEIRVAVTDATRIHGLMSRLGRLFDHSSVWFDGARGEVRVRSEWESRSVVAVIDAVQ
Ga0208563_110724813300025501PeatlandMEIRVAVADATGAHGLVRRFAGLFDPSSVSFDGTRNEVRVHS
Ga0208356_106287413300025504Arctic Peat SoilMVEISVAVVDPTTVHGLVQRLTGLFDGPSVSFDPARGEVRVRSEWESRSVVQVIDLVESWLATDGPEWVTLSVG
Ga0207692_1011976813300025898Corn, Switchgrass And Miscanthus RhizosphereMVEIRVSVADAARVPGLMRQLAGLFDRSSLSFDRSRKEVRVTSEWESRSVVHVVDAVAA
Ga0207692_1052046823300025898Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVTDATRIHGLMRRLGTLFDRSSVSYDGARREIRVRSEWESRSVVGVIDA
Ga0207705_1098873923300025909Corn RhizosphereMVEIRVAVTDATRIHGLMSRLGRLFDHSSVWFDGARGEVRVRSEWESRSVVAV
Ga0207707_1047176223300025912Corn RhizosphereMVEIRVAVTDAARAHGLLRRLTTLFGRSAVSFDGLRNEVQVKSEWE
Ga0207693_1128799013300025915Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATEVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSV
Ga0207660_1105701223300025917Corn RhizosphereMVEIRVAVPDDTCGHGLMRRLAGVFDRSSVSFDRVQSEVRVHSKWESRGIVQ
Ga0207649_1121343813300025920Corn RhizosphereMVEIRVSVPDAAGANGLLARLAALFDRSAVSFDGMRNEVRVRSEWESRSVVAVIDAVQSWLAADGVDS
Ga0207652_1035945413300025921Corn RhizosphereVVEIRVAVPDAAQAHGLLARLAALFGRSSVSFDGMHHEIRVSSEWESRSVVAVIDAVQSWLAADGVDSAKLS
Ga0207646_1110891123300025922Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADGTAVHGLVRRLTGVFDGPSVFFDATRGEVRVRS
Ga0207664_1077845123300025929Agricultural SoilMVEIRVALSGAAEAQGLLQRLAALFGRSSLSFDETRNEVRVRSEWESRSVVEVIDTVQSWLAADGVGSAELS
Ga0207665_1125985813300025939Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVPDATPVHGLMRRLGRLFDRSSVSFDAMRKEVRVRSEWES
Ga0207679_1144238413300025945Corn RhizosphereMVEIRVAVTDATRIHGLMSRLGRLFDHSSVWFDGARGEVRARSE
Ga0207639_1166141613300026041Corn RhizosphereMVEIRVAVTDATRVHGLMRRLGGVFDGSAVSFDGTRGEVQVRSEWESRSLVQVLGAVESWLAEDGP
Ga0207708_1131160423300026075Corn, Switchgrass And Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSVVHVVDAVAAWLAE
Ga0207702_1120462013300026078Corn RhizosphereMVEICVAVTDAKRIHGLMRRLGTLFDRSSVSYDGARREVRVRSEWESRSVVEVI
Ga0207648_1148589513300026089Miscanthus RhizosphereMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESR
Ga0207698_1096403213300026142Corn RhizosphereMVEICVSLTNAAEANGLRARLAALFGRSAVSFDGRRNELRVRSEWESRSVVAVIDAVQSWLAA
Ga0209027_105176713300026300Grasslands SoilMVEIRVGVADAPGVHGLMRRLAGVFDRSSVSFDGARKEVRVHSEWES
Ga0209027_131205823300026300Grasslands SoilMVEIRVAVTDATRIHGLMSRLGRLFDGSSVSFDGARGEVHVRSEWGSRSVVEVIDAVQSWLEAD
Ga0209153_102476733300026312SoilMVEIRVGVADASGVHGLMRRLAGVFDRSSVSFDGTRKEVHVRSEWESRGVVQVI
Ga0209266_119574313300026327SoilMVEIRVAVTDATRIHGLMSRLGRLFDGSSVSFDGARGEVRVRSEWGSRSVVEVIDAVQSW
Ga0209057_115693613300026342SoilMVEIRVKVDDATRVHRLMRRLAALFGRSAISFDGSRNEVRVESEWESRGVVHVIDAVEAW
Ga0257156_111942423300026498SoilMVEICVAVADADGAQGLLQRLAAFFDRSSVSFDATRNEVRVRSDRESRSVVRVIDAVQSWLAADGVDSAELSL
Ga0209577_1064725223300026552SoilMVEICVAVEDVGRVSGLMRRLAALFDRSSVSFDRSRQEVRVKSEWESRGV
Ga0207582_102114823300026960SoilMVEIRVAVPDATSVHGLMRCLAGLFDRSSVSFDGAHGEVH
Ga0207540_10201413300027385SoilMVEIRVAVPDDTCGHGLMRRLVGLFDRSSVSFDGAQRE
Ga0209810_109322313300027773Surface SoilMVEIHVAVEDATGVHGLLRRLAALFDRSSIDFDGTRNEIRVRSEWESRSIVQVIDAVQSWLAVDGAASA
Ga0209810_118465413300027773Surface SoilMVEVCVAVPDVAEADGLLARLAALFGRSAVFFDGARNEIRVRSEWESRSVVAVIEAVQSWLAAVGVDS
Ga0247685_102020323300028065SoilMVEICVAVTDAKRIHGLMRRLGTLFDRSSVSYDGARREVRVRSEWESRSVVEVIDAVQSWLEADGLGSAE
Ga0307311_1016817923300028716SoilMVEIRVTVDDDMGVHGLMRRLAALFGRSAISFDHSCNEVRVESEWESRGVVEVIEAVEAWIDEVGGKGA
Ga0307320_1005392513300028771SoilMVEIRVAVDDARRVHGLVRRLAALFDRSAVSFDRSRKEIRVESEWESRGG
Ga0265338_1059172213300028800RhizosphereMVEIRVAVADATVAHGLMQRFAALFDRSAVSFDRFRNEVHVRSEWESRAVVQVIDTVESWLATAGVG
Ga0307305_1027302923300028807SoilMVEIRVAVDDATRVHGLMRRLASLFDRSAISFDRSRKEIRVKSEWESRGVVHVIDAV
Ga0307308_1042021113300028884SoilMVEIRVAVDDATRIHGLIRRLGALFDRSAVSFDRSRKEIRVESEWESRGVVTVIDAVEAWIEEDGGRCAM
Ga0307497_1000393013300031226SoilMVEICVAVADATCAHGLMRALARLFDGSPVSFDRTRSEVSVRSEWESRSVMHVIDTVERGCAA
Ga0307418_108425123300031341Salt MarshMVEIRVGVADVAVADELMRRLARLFNQASVSFDGARNEVRVRSEWESRAVVEVIEAVEWWLTAD
Ga0265313_1002500043300031595RhizosphereMVEIRVAVADATVAHGLMQRFAALFDRSAVSFDRFRNEVHVRSEWESRAVVQ
Ga0310890_1067509613300032075SoilMVEIRVSVADVTRVPGLMRQLTGLFDRSSLSFDRSRKEVRVTSEWESRSVVHVVDAVAAWLAENDADSA
Ga0307471_10328146913300032180Hardwood Forest SoilMVEIRVAVADATHVPGLMRRLAGLFDRSSVSFDRTRKEVRVTSEWESRSVVHVVDAVEA
Ga0247829_1033471323300033550SoilMVEIRVAVADATHVPGLMRRLAGLFDRSSLSFDRTRKEVRVTSEWESRSVV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.