NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F035042

Metagenome / Metatranscriptome Family F035042

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F035042
Family Type Metagenome / Metatranscriptome
Number of Sequences 173
Average Sequence Length 54 residues
Representative Sequence MKNKPDPADSSLSETMAARIEINELGDPAHQKKITDAVEALDGVIETKIAKG
Number of Associated Samples 139
Number of Associated Scaffolds 173

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 12.79 %
% of genes near scaffold ends (potentially truncated) 93.06 %
% of genes from short scaffolds (< 2000 bps) 93.06 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.225 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(12.717 % of family members)
Environment Ontology (ENVO) Unclassified
(38.150 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.399 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.
1GPIPI_00808050
2GPIPI_01952820
3GPIPI_00305760
4GPIPI_02173570
5E41_03501590
6FA2_00358600
7FE2_03051110
8INPhiseqgaiiFebDRAFT_1005206401
9F14TC_1005231061
10F14TC_1009098371
11F14TC_1009126481
12F14TC_1017959282
13JGI11643J11755_112505521
14JGI11643J12802_122221692
15JGI1027J12803_1053664191
16JGI10216J12902_1058358372
17JGI10216J12902_1119916452
18JGI10216J12902_1180245972
19JGI10216J12902_1248325212
20JGI10220J13317_104624732
21JGI24737J22298_102438731
22Ga0062593_1031138651
23Ga0063455_1014994151
24Ga0062590_1004391882
25Ga0062595_1026527701
26Ga0062591_1025981602
27Ga0062594_1006180603
28Ga0062594_1019681982
29Ga0066684_108687991
30Ga0066685_110423921
31Ga0066676_105632772
32Ga0065702_1005552
33Ga0065705_101530483
34Ga0070676_116033192
35Ga0070690_1007307032
36Ga0070670_1004243862
37Ga0066388_1034259691
38Ga0066388_1039990502
39Ga0070666_106451941
40Ga0070668_1005793873
41Ga0070710_101550213
42Ga0070662_1008528351
43Ga0070685_102035291
44Ga0070685_113767662
45Ga0073909_103553892
46Ga0070684_1010703982
47Ga0066707_102115291
48Ga0068856_1018575491
49Ga0068864_1024328452
50Ga0066905_1000407332
51Ga0066903_1025659201
52Ga0066903_1069367872
53Ga0081539_102432371
54Ga0066696_105062741
55Ga0070716_1008520181
56Ga0070712_1000958613
57Ga0066665_107502792
58Ga0075433_106017972
59Ga0068865_1013956332
60Ga0075419_112983652
61Ga0099791_102139681
62Ga0066710_1036538271
63Ga0111539_112587612
64Ga0111539_126172142
65Ga0075418_112904991
66Ga0066709_1015795143
67Ga0066709_1041607981
68Ga0066709_1044412301
69Ga0099792_108382241
70Ga0111538_108964211
71Ga0075423_122430101
72Ga0075423_129931471
73Ga0126374_107624981
74Ga0126305_111656341
75Ga0126384_106865142
76Ga0134109_100638731
77Ga0134084_102803651
78Ga0126378_106489722
79Ga0126377_131253421
80Ga0126379_101782144
81Ga0126379_130115781
82Ga0134125_128352032
83Ga0134128_123125581
84Ga0126381_1018751411
85Ga0126381_1019185842
86Ga0134124_127022251
87Ga0126383_130406573
88Ga0126383_132472141
89Ga0137364_103200302
90Ga0137364_109585312
91Ga0137382_100811881
92Ga0137382_101943022
93Ga0137382_111213712
94Ga0137381_114442702
95Ga0137370_102034211
96Ga0137370_103138441
97Ga0137387_109925512
98Ga0137372_102075064
99Ga0137360_111780572
100Ga0137361_116050651
101Ga0150984_1189042702
102Ga0137373_105901562
103Ga0157287_10663732
104Ga0157289_101724252
105Ga0137359_116464991
106Ga0137419_109736271
107Ga0137404_103350493
108Ga0137404_118901251
109Ga0137407_108372171
110Ga0164300_103949882
111Ga0126369_127805232
112Ga0126369_134999762
113Ga0134087_100621721
114Ga0157378_122028481
115Ga0163162_110683641
116Ga0157372_115295281
117Ga0157376_101910063
118Ga0137418_107080011
119Ga0134085_104618592
120Ga0134085_104995002
121Ga0132258_103893924
122Ga0132258_134912472
123Ga0132256_1003448061
124Ga0132256_1008456212
125Ga0132257_1003617404
126Ga0132257_1007662823
127Ga0132257_1009703052
128Ga0132257_1029506941
129Ga0132255_1005787941
130Ga0182041_101360753
131Ga0182035_117168912
132Ga0182032_103896522
133Ga0182040_105779271
134Ga0184617_11710401
135Ga0066662_129262101
136Ga0066669_100210994
137Ga0193747_10152402
138Ga0193692_10036341
139Ga0193735_10292952
140Ga0193732_10040931
141Ga0193734_10709772
142Ga0193721_10455362
143Ga0207666_10060884
144Ga0207685_108345762
145Ga0207705_107113771
146Ga0207705_107884841
147Ga0207663_111942362
148Ga0207659_108854642
149Ga0207700_115121412
150Ga0207701_103465441
151Ga0207670_100486081
152Ga0207704_115152672
153Ga0207679_106480891
154Ga0207668_112398822
155Ga0207676_122681931
156Ga0209473_10191221
157Ga0257146_10502051
158Ga0209807_11264162
159Ga0179587_104371441
160Ga0208071_1006552
161Ga0207624_1101131
162Ga0209811_103512851
163Ga0207428_106251852
164Ga0307280_101572473
165Ga0307281_103211961
166Ga0075386_122348222
167Ga0307497_103049922
168Ga0310915_103900041
169Ga0310813_109696201
170Ga0310813_118027521
171Ga0307469_114231582
172Ga0306922_103639541
173Ga0310906_105925541
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.00%    β-sheet: 0.00%    Coil/Unstructured: 80.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MKNKPDPADSSLSETMAARIEINELGDPAHQKKITDAVEALDGVIETKIAKGSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
57.8%42.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Grass Soil
Surface Soil
Switchgrass Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Grasslands Soil
Grass Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
8.1%12.7%6.9%2.9%4.0%12.1%3.5%2.9%3.5%2.9%3.5%4.0%5.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_008080502088090014SoilMKNKPDSADSSLSETMAARIEVNDVGDPALQKKMTDPVEALDGVIGTEIEKGALHVSYDPLAD
GPIPI_019528202088090014SoilMKNKPDSADSSLSETMAARIEVNDVGDPALQKKMTDAVEVWTA
GPIPI_003057602088090014SoilMKHKSDSAGSSLNETMAARIEIKELGDPTRQKQITDAVVALASVIEANDGSEPVALFN
GPIPI_021735702088090014SoilMKKEPDPADSSLSETMAARIEIKELGDPAHQKKITDAVEALDG
E41_035015902170459005Grass SoilMCKRHEEKRNPAAFNLSETMAARIEIKELGDPAHQKKIT
FA2_003586002170459022Grass SoilKPDSTDSSLSETMAARIEIKELGDPAHQRKSPMRSKL
FE2_030511102189573003Grass SoilMKNKPDPVDSSLSETMAARIEINQLGDPAHQKKITDAVEALDGVIETKIEKGALHVS
INPhiseqgaiiFebDRAFT_10052064013300000364SoilMKNKTNPADSSLSETMVARIEIQELGDPARQKEITXXVEAL
F14TC_10052310613300000559SoilMKKEPEHADSSLTETMAARIEIKELGDPAHQKKITDAVEALDGVIETKIEK
F14TC_10090983713300000559SoilMKDKPDSADSSLSETMAARIEIAELGDPAQQKKIIDAVEALDGVIETKIEKGAVHVSYDPLATTEKKIE
F14TC_10091264813300000559SoilMKDEPDAAQSSLSETMAARIEIKELGDPARESEITDAILALDGVIEARIQQGALHVSYDPLTTTEKKIEQA
F14TC_10179592823300000559SoilMNDEPDHTHSTLSETMAARIEIKDLGDPEREKKITDAVEALDGVI
JGI11643J11755_1125055213300000787SoilMKNKPDSADSSLSETMAARIEVNDVGDPALQKKMTDAVEVWTA*
JGI11643J12802_1222216923300000890SoilMKNKTDSADSSLSETMAARIEVNDAGDPAHQKKITDAVEALDGVIETKIEKGALHVSYDPLATTEKKXXXXSRFESERNHGSSN*
JGI1027J12803_10536641913300000955SoilMKKEPEHADSSLTETMAARIEIKELGDPAHQKKITDAVEALDGVIETKIEKGALHVSFDPLATTEKKIEQAIRSTGTT
JGI10216J12902_10583583723300000956SoilMYAMKEKANDVADSGLSETVVARIEINELSDPARQRQISDAVQALDGVIEFKIE
JGI10216J12902_11199164523300000956SoilMKKERDPADSSLSETMAARIEINELGDPARQKEITDAVEALDGVIETKIEKGALHVSYDPLVTTKKKSSRLSAR*
JGI10216J12902_11802459723300000956SoilMREEPNHADSTLSETMAARIEIQELADPACQRQITEAVEAL
JGI10216J12902_12483252123300000956SoilMKNKPDSADSSLSETMAARIEIKELGDPAHQKKITDAVGALDGVIETKIAKGALHVSYDP
JGI10220J13317_1046247323300001139SoilMKDKSDHADSSLSETMAARIEIKELGDPGRQKEITDAVEALGGVIELKIAK
JGI24737J22298_1024387313300001990Corn RhizosphereMKNKPESPDSSLSETMAARIEIKELGDPAHQKKITDAVEALDGVIDTKIAKGALHV
Ga0062593_10311386513300004114SoilMKKEPDPADSSLSETMAARIEIKELGDPAHQKKITDAVEALDGV
Ga0063455_10149941513300004153SoilMKNTPDPSDSSLDETMAARIEINELGDPAHQKKITDAVEALDGV
Ga0062590_10043918823300004157SoilMKNKPDSADSSLSETMAARIEIEELGDPAHQKKITDAVAALDGVIE
Ga0062595_10265277013300004479SoilMKNKPDPADSSLSETMAARIEIKELEDPAHQKKITDAVAALD
Ga0062591_10259816023300004643SoilMKNKPDPADSSLTETMAGRIEIKELGDPAHQKKVTDAVEALDGVTEAKIEKGALHVSYDPLATTEKKIEQAV
Ga0062594_10061806033300005093SoilMKNKTDPADSSLSETIAARIEIEELGDPAHQKKITDAVAALDGVIETK
Ga0062594_10196819823300005093SoilMEKESDHADSSLSEPMAARIEIEEFDDPARHKEIADAVGAVDGVIETK
Ga0066684_1086879913300005179SoilMKNNPDPIDSSPSEKMAARIEIKELGDPAHQKEITDAIEALDGVLETKIEKGALHVSYDPLETTEKKIEQAIR
Ga0066685_1104239213300005180SoilMKDKPDNADSSLSETMAARIEIKELGDPARQKEITDAVKALDGVIEIKIEKGALHVSYDPLVTS
Ga0066676_1056327723300005186SoilMKDKPDNADSSLSETMAARIEIKELGDPARQKEITDAVKALDGVIEIKIEKSAVYVSYDPLATSEKKVEQAILSTG
Ga0065702_10055523300005266Switchgrass RhizosphereMKNKPDSADSSLSETMAARIEIKELGNPAHQKKITDAVAGLDGVIETKIEKGALHVSYDPLATTEKKIEQAIRST
Ga0065705_1015304833300005294Switchgrass RhizosphereMKNKPESPDSSLSETMAARIEIKELGDPAHQKKITDAVEALDGVIDTKIAKGALHVSYDPLATTEKKIE
Ga0070676_1160331923300005328Miscanthus RhizosphereMKNKPESPDSSLSETMAARIEIKELGDPAHQKKITDAVEALDGVIDTKIAKGALHVSYDPLATTE
Ga0070690_10073070323300005330Switchgrass RhizosphereMKDKPDSADSSLSETMAARIEIKELGDPARQKKITDAVGALDGVIETKIAK
Ga0070670_10042438623300005331Switchgrass RhizosphereMKNKPESPDSSLSETMAARIEIKELGDPAHQKKITDAVEA*
Ga0066388_10342596913300005332Tropical Forest SoilMKRQPDQADSSLSENMAARIEIKELGDPTRHKQIIDAVEGLGGIVETKIENDALHVSFDPLATTVKKIEQAIRSAG
Ga0066388_10399905023300005332Tropical Forest SoilMKNKSDPVDSSLSERMAARIEINELGDPAHQKKITDAVEALDGVIETKIEKGALHVSYDPLA
Ga0070666_1064519413300005335Switchgrass RhizosphereMKDKPDSADSSLSETMAARIEIKELGDPARQKKITDAVGAL
Ga0070668_10057938733300005347Switchgrass RhizosphereMKKKTDPADSSLSETMAARIEIEGLGDPADQKKITDAVAALDGVIE
Ga0070710_1015502133300005437Corn, Switchgrass And Miscanthus RhizosphereMKDKPDHADSSLSETMAARIEIKELGDPGRQKEISAAVEALDGVIKLKIAKGALHVSYDPLATN
Ga0070662_10085283513300005457Corn RhizosphereMKNEPDSADSSLSETMAARIEVNDVGDPAHQKKITDALEALDGILETKIEKGALHVSYDPLATTEKKIEQ
Ga0070685_1020352913300005466Switchgrass RhizosphereMKNKTDQTDSSLSETMAARFEIKELGDPARQKKITDAVQALDGVIETKIAKGALHV
Ga0070685_1137676623300005466Switchgrass RhizosphereMKNKPDSVDSSLSETMAARIEIKELGDPAHQKKITDAVGALDGVIETKIAKGALHVSYD
Ga0073909_1035538923300005526Surface SoilMKNKPEPADSSLSETMAARIELKELGDPAHQKKITDAVAALDGVIETKMEKGALHVSYDPLATTEKKIEQ
Ga0070684_10107039823300005535Corn RhizosphereMKNKTDQTDSSLSETMAARFEIKELGDPARQKKITDAVQALDGVIETKIAKGALHVSY
Ga0066707_1021152913300005556SoilMKVKNDPADSSLTETMAARIEIKDLGDPGRQKEITDAVEA
Ga0068856_10185754913300005614Corn RhizosphereMKNKTDQADSSLSETMAARFEIKELGDPAHQKKVTDAVQALDGVI
Ga0068864_10243284523300005618Switchgrass RhizosphereMKNKPDSVDSSLSETMAARIEIKELGDPAHQKKITDAV
Ga0066905_10004073323300005713Tropical Forest SoilMREKPDQADSPLSETMAARIEIKDIGDPSRQKEITDAVEALDGVIEIKIAKGALHVSYDP
Ga0066903_10256592013300005764Tropical Forest SoilMKDKADSADSTLSETMAARIEINELGDPVHQKKIIDAVEALDGVIETKIEKGAVHVSYDPLATTEKKIE
Ga0066903_10693678723300005764Tropical Forest SoilMKNKPDSADSRLTETMAARIEIKELGDPVHQKKLTDAVEALDGVIETKIAK
Ga0081539_1024323713300005985Tabebuia Heterophylla RhizosphereMKNKPDPADSSLGETMAARIEIKELGDAARQKQITDAVGALEGVIDTKIEKGALHVS
Ga0066696_1050627413300006032SoilMKNKPDPTDSSLNETMAARIEIKELGDAVHQKKITDAVEA
Ga0070716_10085201813300006173Corn, Switchgrass And Miscanthus RhizosphereMKNKPDLADSSLSENMAARIEINELGDPVRQKELTEAVEALDGVIETKIEKGALHVSYDPLATTEKKIEQA
Ga0070712_10009586133300006175Corn, Switchgrass And Miscanthus RhizosphereMQNKPEPADSSLRETMAARIEINELDDPVRQKEISDAVKALDGVIETKIEKGAARLLRSVGND*
Ga0066665_1075027923300006796SoilMKNKRDPTDSSLSEKMAARIEIKELGDPAHQKEITDAIEALDGVLETKI
Ga0075433_1060179723300006852Populus RhizosphereMKNKPDSADSSLSETMAARIEVNDVGDPAHQKKITDAVEALDGVIETKIEKGALHVSYDPLATTEKKIEQAIR
Ga0068865_10139563323300006881Miscanthus RhizosphereMKDKSDHADSSLSETMAARIEIKELGDPGRQKEITDAVEALGGVIELKIAKGALHVS
Ga0075419_1129836523300006969Populus RhizosphereMKNKPDSADSSLSETMAARIEINELGDPAHQKKITDAVEALDGVIETKIAKGA
Ga0099791_1021396813300007255Vadose Zone SoilMKKKPDPADSSLRETMAARIEIKELGDPTRQKEITDAVVALDGVIEAKIEKGALHVSYDPLATSEKKIEQAI
Ga0066710_10365382713300009012Grasslands SoilMKKEPDRTESSLSETMASRIEIEELGDPARQRKITDAVGALGGVIEVKIENDALHVSYDPLATTEKKIEQAVRSAGNT
Ga0111539_1125876123300009094Populus RhizosphereMKNKPDSADSSLSETMAARIEINELGDPAHQKKITDAVEALDGVIE
Ga0111539_1261721423300009094Populus RhizosphereMKNKTDSADSSLSETMAARIEIEELGNPTHQKKITDAVAALDGV
Ga0075418_1129049913300009100Populus RhizosphereMKNKSDSAHSSLSETMAARIEVNDVGDPAHQKKITDAVEALDGVIETKIEKGALHVSYDPLATTEKKIEQAI
Ga0066709_10157951433300009137Grasslands SoilMKNKPDPADSSLRETMAARIEIKELGDPAHQKKITDAVEALEGVTESRIEKGALHVSYDPLA
Ga0066709_10416079813300009137Grasslands SoilMKKEPDRTESSLSETMASRIEIEELGDLARQRKITDAVGALGG
Ga0066709_10444123013300009137Grasslands SoilMKNKPESADSSLSEVMAARIEINELKDPAQQKKMIDAVQAL
Ga0099792_1083822413300009143Vadose Zone SoilMNDEPDHTDRSLSETMAARIEIKELGDPVRQKEITAAVEALD
Ga0111538_1089642113300009156Populus RhizosphereMKNKPDSANSSLSETMAARIEIKELGDPARQKKITD
Ga0075423_1224301013300009162Populus RhizosphereMKNKPDPADSSLSETMAARIEIKELGDPARQKEITDAVEALDGVIELKIAKGALHVSFDP
Ga0075423_1299314713300009162Populus RhizosphereMKDKPDHADSSLSETMAARIEIKELGDPNRQKEITDAVEALG
Ga0126374_1076249813300009792Tropical Forest SoilMKNKPDSADSSLSETMAARIEIKELGDPARQKEITGALEALDGVIETKIENSALHV
Ga0126305_1116563413300010036Serpentine SoilMKNKTDPADSSLTETMAARFEIKELGDPAHQKKITDAVAALEGVIETKIEKGALHVSYDPLATTEKK
Ga0126384_1068651423300010046Tropical Forest SoilMYFEEMKNKPDHADPGLSETMAARIEINELGDVARQKEITDAVEA
Ga0134109_1006387313300010320Grasslands SoilMKNNPDPTDSSLSEKMAARIEIKELGDPAHQKEITDAIE
Ga0134084_1028036513300010322Grasslands SoilMNNEPDRTESSLSETMASRIEIEELGNPARQRKITDAVGALDG
Ga0126378_1064897223300010361Tropical Forest SoilMKDKPNPADSSLSETMAARIEVAELGDPAQQKKIIDAVEALDGVI
Ga0126377_1312534213300010362Tropical Forest SoilMKNKPDTADSSLSETMAARIEIKELRNPAHQKRITDAIEALNGVIETKLEKGALHVSHDPLTTTEKKIEQAI
Ga0126379_1017821443300010366Tropical Forest SoilMKNKHERADSSLRETMAARIEIKKLGDPARQKKITDAVDALDGVIVLYGGY
Ga0126379_1301157813300010366Tropical Forest SoilMYFEEMKNKPDHADPGLSETMAARIEINELGDPVHEKKIIDAVEALDGVIETKIEKGAIHVSYDP
Ga0134125_1283520323300010371Terrestrial SoilMKNKPDPADSSLTETMAARIEIKELGDPAHQKKITDAVDALDGVIETKVEKGALHVSYDPLATTEKK
Ga0134128_1231255813300010373Terrestrial SoilHEHLKGMKNKTDQADSSLSETMAARIEIKELGDPARQKKITDAVQALDGVIETKIAKVHCTSRTIR*
Ga0126381_10187514113300010376Tropical Forest SoilMKEKTDHTDSSLSETMAARIEINELGDSAREKETTDAVEALEGV
Ga0126381_10191858423300010376Tropical Forest SoilMKDKPNPANSSLSETMDARIEINELRDPAQQKKIIDAVE
Ga0134124_1270222513300010397Terrestrial SoilMKDKPDSADSSLSETMAARIEIKELGDPAHQKKITDAVGALDGVIETKIAKGALHVSYDPLATTEKKIEQAI
Ga0126383_1304065733300010398Tropical Forest SoilMKEEPNPAVSSLTETMAARIEINELGDPARQKEIIDAVEALDGVIETKIE
Ga0126383_1324721413300010398Tropical Forest SoilMKDKSDPVDSSLSETMAARIEINELGDPAHEKEIIDAVEALDGVIETKIEKGAIHVSYDP
Ga0137364_1032003023300012198Vadose Zone SoilLTQQSFRKKISKGMKNKPDPKDSSLSETMVGRIEINELGDPAHQKRITDSVEALDGVIETKIENGALHVSYD
Ga0137364_1095853123300012198Vadose Zone SoilMKNKPDPADSSLRETMAARIEIKELDDPVRQKQISDAVEALDGVIETKIEKGAL
Ga0137382_1008118813300012200Vadose Zone SoilRLARTSSKGMTNKPDPADSSLRETMAARIEIKELGDPAQQKKITNAVKALDGVIETKIEKGRAARLLRSAGHE*
Ga0137382_1019430223300012200Vadose Zone SoilMKNKPDPVESSLRETMAARIEINELGDPVRQKEITDAVEALDGVIETKIEKGALHVSYDPLATTEKKIEQ
Ga0137382_1112137123300012200Vadose Zone SoilMKNKPDPADSSLSETMAARIEIKELRNPAHQKEITDAVEALDGVIETKIEKGALHVSYDPLATTEKKIEQ
Ga0137381_1144427023300012207Vadose Zone SoilMKNKPDPADSSLSENMAARIEINKLGDPTRQKEITDAVEALDGVIETKIEKG
Ga0137370_1020342113300012285Vadose Zone SoilMKKGPDHANSSFSETMVARLEIKELGDPARERKIIDAVMALNGIIEAKIEKDALHVSYDPLATTENKIEQAV
Ga0137370_1031384413300012285Vadose Zone SoilMKNKPDPADSSLRETMAARIEIKELGDPAHQKKITDAVEALEGVTESRIEKGALHVSYD
Ga0137387_1099255123300012349Vadose Zone SoilMTNKPDPADSSLRETMAARIEIKELGDPAHQKEITDAIEALDGVIETKIEKGALHVSYDPLAT
Ga0137372_1020750643300012350Vadose Zone SoilMKNKPDPTDSSLSEKMAARIEIKELGDPAHQKEITDAIEALDGVLETKIEKGAL
Ga0137360_1117805723300012361Vadose Zone SoilMRNKPDPADSSLRETMAARIEIKELGDPVRQKEITDAVEALSGVIETKIEKGALHVSYDPLA
Ga0137361_1160506513300012362Vadose Zone SoilMKKEPDRTKSSLSETMASRIEIEELGDPARQRKIVDAVGALGGVIEVK
Ga0150984_11890427023300012469Avena Fatua RhizosphereMKNKPDPTDSSSSETMSARIEIEEPGDPARQKKISDAVEALD
Ga0137373_1059015623300012532Vadose Zone SoilMKNKPDPADSSLSETMAARIEIKELGDPAHQKKITDAVEALDA*
Ga0157287_106637323300012885SoilMKNKTDSADSSLSETMAARIEIEGLGDPARQKKIT
Ga0157289_1017242523300012903SoilMKNKTDPGDSSLSETMAARIEIEELGDPAHQKKITNAVAALDGVIE
Ga0137359_1164649913300012923Vadose Zone SoilMKEEPDHADSSLSETMAARLEIEQLGDAVRQKEIIDAVVALDGVIEATAEKGALHVSFDPLATTQKKIEQAVRGTGNT
Ga0137419_1097362713300012925Vadose Zone SoilMKNKPDPADSSLRETMAARIEIQELGDPVRQKEITDAVEALGGVIETKIEKGALH
Ga0137404_1033504933300012929Vadose Zone SoilMTNKPDPADSSLRETMAARIEIKELGDPAHQKEITDAIEALDGVIETKIE
Ga0137404_1189012513300012929Vadose Zone SoilMKNKPDPADSSLSETMAARIEIKELRNPAHQKEITDAVEALDGVIETKIEKGALHVSYDPLA
Ga0137407_1083721713300012930Vadose Zone SoilMMNKPDPADSSLRETMAARIEIKELGDPAHQKEITDA
Ga0164300_1039498823300012951SoilMKNKTDPADSSLSETMAARIEIEELGNPAHQKKITDAVAALDGV
Ga0126369_1278052323300012971Tropical Forest SoilMKDKPDSADSSLSETMAARIEINELGDPAHQKKIVNAVEALDGVIKTKIQKGALHVSYDPLTTTENKIEQAI
Ga0126369_1349997623300012971Tropical Forest SoilMKDKSDPVDSSLSETMAARIEINELGDPAHEKEIIDAVEALDGVIETKIEK
Ga0134087_1006217213300012977Grasslands SoilMKKEPAGDSSLSETMVARIEINELGDVARQKQITDAVEALDGVIEMKI
Ga0157378_1220284813300013297Miscanthus RhizosphereMKNKTDPGDSSLSETMAARIEIEELGDPAHQKKITDAVA
Ga0163162_1106836413300013306Switchgrass RhizosphereMKKKTEPADSSLSETMAARIEIKDLGDSAKQKKIADAVEALDGV
Ga0157372_1152952813300013307Corn RhizosphereMKNKPDPADSSLSENMAARIEINELGDPVHQKELTDAVEALDGVIETKIEKGALHVSYDPLATTEKKIEQA
Ga0157376_1019100633300014969Miscanthus RhizosphereMKNESDPSGSSLSETMAVRIEIEELGDPAHQKKITDAVAGLDGVIETKIEKR
Ga0137418_1070800113300015241Vadose Zone SoilMKNKPDPTDSSLSEKMAARIEIKELGDPAHQKEITDAIEALDGVIETKIEKGALHVSYDP
Ga0134085_1046185923300015359Grasslands SoilMKNKSDADSSLSETMAARIEIKELGDPGRQNEITDAVEALDGVIELKIAKSALHVSYDPLATNE
Ga0134085_1049950023300015359Grasslands SoilMKKEPAGDSSLSETMVARQKQITDAVEELDGVIEMKIEKGALHVSYDPLATTE
Ga0132258_1038939243300015371Arabidopsis RhizosphereMKNKTGSVDPSLSETMAARIEIKELGGPAHQKQITAAIERLDGIIETKIA*
Ga0132258_1349124723300015371Arabidopsis RhizosphereMKNKTDQTDSSLSETMAARFEIKELGDPAHQKKITDAVQALDGVIETKIAKVHCTSRTIR
Ga0132256_10034480613300015372Arabidopsis RhizosphereMKNKTDQTDSSLSETMAARFEIKELGDPARQKKITDAVQP*
Ga0132256_10084562123300015372Arabidopsis RhizosphereMKNKTDSADSSLSETMAARIEIEELGNPAHQKKITDAVAALDGVIE
Ga0132257_10036174043300015373Arabidopsis RhizosphereMKNKNDSTDSSVSETMAARIEITELGDPTRQKQITDAI
Ga0132257_10076628233300015373Arabidopsis RhizosphereMKNKPDPNGSSLSETMAARIEIKELGDPAHQKKIIDAVAALDGVIETKIAKRALHVSYDPLATTEK
Ga0132257_10097030523300015373Arabidopsis RhizosphereMKNEPDSADSSPSETMAARIEVNDVGDPAHQKKITDALEALDGVLETKIEK
Ga0132257_10295069413300015373Arabidopsis RhizosphereMKNKPDPADSSLSETMAARIEIKELGDSAHQKEITDAVEALDGVIEIKIEKGALHVSYDP
Ga0132255_10057879413300015374Arabidopsis RhizosphereMMNKPEPADSRLSETMAARIEINELGDPAQQKKITDAVEALDGVI
Ga0182041_1013607533300016294SoilMKDKPDSADSSLSETMAARIEINELGDPAHEKKIIDAVGALDSVIENQNRERALHVSNDPLATIEKKIEQAIRST
Ga0182035_1171689123300016341SoilMKNKPDSADPSLSETMAARIEIKELGDPAHQKKITDAVKALDG
Ga0182032_1038965223300016357SoilMKNNPDPVDSSLSETMAARIEINELGDPIHEKKIIDAV
Ga0182040_1057792713300016387SoilKNKPDPADSSLNETIAARIEIKELGDPAHQKKITDAVEALDGVIETK
Ga0184617_117104013300018066Groundwater SedimentMKNKPDLADSSLTETMAARIEIKELGDPTRQKQITDEIEALDGVIEAKIE
Ga0066662_1292621013300018468Grasslands SoilMKNKPDPTDSSLNETMAARFEIKELGDAVHQKKITDAVEALHGVIETK
Ga0066669_1002109943300018482Grasslands SoilMNNKTDPADSNLSETMAARIEIEELGDPAHQKKITDEVEA
Ga0193747_101524023300019885SoilMKKEPDRTESSLSETMAARFEIEELGDPDRERKIIDAV
Ga0193692_100363413300020000SoilMKNKTDSVDSSLSETMAARIEIKELKDPAHEKKITDAVAALNGIIETKIEKGA
Ga0193735_102929523300020006SoilMKDKPDHADSSLSETMVARIEIKDLGDPNRQKEITDA
Ga0193732_100409313300020012SoilMKDKSDRADSSLSETMAARIEIKELGDPTRQKEITDAVEALDGVIETK
Ga0193734_107097723300020015SoilMKNKPDPADSSLSENMAARIEIKELGDPVRQKEITNAVEALGGVIETKIEK
Ga0193721_104553623300020018SoilMKKEPDRTESSLSETMAARFEIEELGDPDRERKIIDAVGALDGVIEVKIENGALHVSYDALATTEKK
Ga0207666_100608843300025271Corn, Switchgrass And Miscanthus RhizospherePESPDSSLSETMAARIEIKELGDPAHQKKITDAVEA
Ga0207685_1083457623300025905Corn, Switchgrass And Miscanthus RhizosphereMKDKPDSADSSLSETMAARIEIKELGDPAHQKKITDAVGALDGVIET
Ga0207705_1071137713300025909Corn RhizosphereMKNKTDQTDSSLSETMAARFEIKELGDPARQKKITDAVQALDGVIESKIAKGALHVSYDPLTTTE
Ga0207705_1078848413300025909Corn RhizosphereMKNKPDAADSSLSETMAARIEINELGDPTHQKKITDAIVALDGVIEAK
Ga0207663_1119423623300025916Corn, Switchgrass And Miscanthus RhizosphereMKDKPDSAADSSLSETMAARIEIDELGDPAHQKKI
Ga0207659_1088546423300025926Miscanthus RhizosphereMKNEPDSADSSLSETMAARIEVNDVGDPAHQKKITDALEALDGVLETKIEKGALHVSYDPLATTEKKI
Ga0207700_1151214123300025928Corn, Switchgrass And Miscanthus RhizosphereMNNKTDPVDSSLSETMAARIEINDLGDPAQQKKITDAVGAMDGVIEGKIENGALHVSYDP
Ga0207701_1034654413300025930Corn, Switchgrass And Miscanthus RhizosphereMKNKPEPADSSLSETMAARIEIKELGDPAHQKKITDAVAALDGVIETKIEKGA
Ga0207670_1004860813300025936Switchgrass RhizosphereMKNKTDSADSSLSETMAARIEIEGLGDPARQKKITD
Ga0207704_1151526723300025938Miscanthus RhizosphereMKDKSDHADSSLSETMAARIEIKELGDPGRQKEIT
Ga0207679_1064808913300025945Corn RhizosphereMKNKTDQTDSSLSETMAARFEIKELGDPARQKKITDAVQALDGVIETKI
Ga0207668_1123988223300025972Switchgrass RhizosphereMKNKPDAADSSLSETMAARIEINELGDPTHQKKITD
Ga0207676_1226819313300026095Switchgrass RhizosphereMKNKPDSVDSSLSETMAARIEIKELGDPAHQKKITDAVGALDGVIETKIAKGALHVSYDPLGTTEKEIEQAICST
Ga0209473_101912213300026330SoilMKKEPAGDSSLSETMVARIEINELGDVARQKQITDAVEALDGVIKM
Ga0257146_105020513300026374SoilMKNKPEPADSSLSENMAARIEIKELGDPAHQKKITDAIEAL
Ga0209807_112641623300026530SoilMKNKPEPNDSSLSETMAARIQINELGDPAHQKKITDAIEALEGVSETKIENGALHVSYDP
Ga0179587_1043714413300026557Vadose Zone SoilMTNKPDPADSSLRETMAARIEIKELGDPAQQKKITNAVKALDGVIETKIEKGRAARLLRSAGHE
Ga0208071_10065523300026688SoilMKNKPDAAASSLNETMAARIEIKELGDPAQQKKITDAVEALDGVIET
Ga0207624_11011313300027453SoilMKNKPDSPDSSLSETMAARIEIKELGDPAHQKKITDAVGALDGVIETKIAKGALHVSYDPLAT
Ga0209811_1035128513300027821Surface SoilMKNKPEPADSSLSETMAARIEIKELGDPAHQKKITDAVAVLDGVIESKIEKGALHVSYDPLATTEKKI
Ga0207428_1062518523300027907Populus RhizosphereMKNKPDSADSSLSETMAARIEINELGDPAHQKKITDAVEALDGVI
Ga0307280_1015724733300028768SoilMKNKPDPADSSLTETMAARIEIKELTDPTRQKQITDAIVALDGV
Ga0307281_1032119613300028803SoilMKNKTDSVDSSLSETMAARIEIKELGDPAHQKKITDAVAALDGVIESKIEKGALHVSYD
Ga0075386_1223482223300030916SoilMKNKPDPTGSSLSETMAARIEIKELGDPAHQKKITDAIAALDGVIETKIEKGA
Ga0307497_1030499223300031226SoilMKDKSDPTSSSLSETMAARIEIKELGDPAHQKKITDAVAASDGVI
Ga0310915_1039000413300031573SoilMKDKPDSADSSLSETMAARIEINELRDPAHEKKIIDAVGALDSVIENQNRERALHVSNDPLA
Ga0310813_1096962013300031716SoilMKDKPDSADASLSKTMAARIEIDELGDPAHEKKITDA
Ga0310813_1180275213300031716SoilMKDKTSHTNSSLRETMAARIEIKELGDPACQKKLTDAILALDGVIEARIENGALHVS
Ga0307469_1142315823300031720Hardwood Forest SoilMKNKPDPADSSLSETMAARIEINELGDPAHQKKITDAVEALDGVIETKIAKG
Ga0306922_1036395413300032001SoilMKNNPDPVDSSLSETMAARIEINELGDPIHEKKIIDAVEAVDGVIETKIEKGAIHVSYDPLATTEKKIEQAIRS
Ga0310906_1059255413300032013SoilMKNKPDSADSSLRETMAARIEIKELRDPARQKKITD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.