Metagenome / Metatranscriptome Family F034840

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034840
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	66 residues
Representative Sequence	VAEPDDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAPRP
Number of Associated Samples	118
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.69 %
% of genes near scaffold ends (potentially truncated)	96.53 %
% of genes from short scaffolds (< 2000 bps)	89.02 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.971 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.694 % of family members)
Environment Ontology (ENVO)	Unclassified (64.740 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.32% β-sheet: 17.05% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF12544	LAM_C	33.53
PF04055	Radical_SAM	21.39
PF10458	Val_tRNA-synt_C	6.94
PF01135	PCMT	0.58
PF00005	ABC_tran	0.58
PF08264	Anticodon_1	0.58
PF02321	OEP	0.58
PF02254	TrkA_N	0.58
PF01471	PG_binding_1	0.58
PF10691	DUF2497	0.58
PF00070	Pyr_redox	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.16
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.58
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.58
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.58
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.59 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.39 %
Unclassified	root	N/A	15.03 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.16 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	18.50 %
Unclassified	root	N/A	15.03 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	9.25 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.16 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8.09 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.16 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.16 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8.09 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.16 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.16 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8.09 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	1.16 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.16 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8.09 %
Archangium violaceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	1.16 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.16 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100074741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3133	Open in IMG/M
3300004091\|Ga0062387_101364572	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300004152\|Ga0062386_100911471	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300005177\|Ga0066690_10374499	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005435\|Ga0070714_102338423	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300005610\|Ga0070763_10773156	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300005764\|Ga0066903_100268366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2658	Open in IMG/M
3300005764\|Ga0066903_105521092	Not Available	666	Open in IMG/M
3300006028\|Ga0070717_10316870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1389	Open in IMG/M
3300006806\|Ga0079220_11362211	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300006806\|Ga0079220_11951457	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006871\|Ga0075434_100424474	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300007788\|Ga0099795_10220057	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010048\|Ga0126373_10494013	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300010048\|Ga0126373_10565203	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300010048\|Ga0126373_11920456	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300010048\|Ga0126373_12845163	Not Available	540	Open in IMG/M
3300010341\|Ga0074045_10689336	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010358\|Ga0126370_11863378	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300010376\|Ga0126381_100415286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1878	Open in IMG/M
3300010376\|Ga0126381_100882521	Not Available	1287	Open in IMG/M
3300010398\|Ga0126383_12086598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	654	Open in IMG/M
3300010398\|Ga0126383_13614305	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012917\|Ga0137395_10611978	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012918\|Ga0137396_10106967	All Organisms → cellular organisms → Bacteria → Proteobacteria	2003	Open in IMG/M
3300012948\|Ga0126375_10149640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300016270\|Ga0182036_10486221	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300016341\|Ga0182035_10156154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1759	Open in IMG/M
3300016387\|Ga0182040_10000768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	14686	Open in IMG/M
3300016387\|Ga0182040_10036754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2929	Open in IMG/M
3300016387\|Ga0182040_10710841	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300016387\|Ga0182040_11044370	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300016387\|Ga0182040_11099600	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300016404\|Ga0182037_10152819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1742	Open in IMG/M
3300016404\|Ga0182037_10239298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1430	Open in IMG/M
3300016404\|Ga0182037_10602556	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300016445\|Ga0182038_10568516	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300016445\|Ga0182038_10685972	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300016445\|Ga0182038_11080901	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300016445\|Ga0182038_11583727	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300017932\|Ga0187814_10352692	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300017959\|Ga0187779_11372450	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300021178\|Ga0210408_10013312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6736	Open in IMG/M
3300021178\|Ga0210408_10360421	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300021358\|Ga0213873_10069119	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300021377\|Ga0213874_10443169	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021406\|Ga0210386_10117177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2200	Open in IMG/M
3300021479\|Ga0210410_10189370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1841	Open in IMG/M
3300021479\|Ga0210410_11179523	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300021560\|Ga0126371_10021955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5899	Open in IMG/M
3300021560\|Ga0126371_10158491	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300021560\|Ga0126371_12440332	Not Available	633	Open in IMG/M
3300022508\|Ga0222728_1046165	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300022523\|Ga0242663_1081633	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300022528\|Ga0242669_1132203	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300022530\|Ga0242658_1136747	Not Available	620	Open in IMG/M
3300022532\|Ga0242655_10001247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3496	Open in IMG/M
3300022532\|Ga0242655_10069433	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300022709\|Ga0222756_1019048	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300022717\|Ga0242661_1028669	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300022718\|Ga0242675_1086482	Not Available	583	Open in IMG/M
3300022724\|Ga0242665_10144579	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300022726\|Ga0242654_10015570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1773	Open in IMG/M
3300026489\|Ga0257160_1066288	Not Available	635	Open in IMG/M
3300026494\|Ga0257159_1043258	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300026998\|Ga0208369_1013709	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300027502\|Ga0209622_1105039	Not Available	518	Open in IMG/M
3300027603\|Ga0209331_1053268	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300027729\|Ga0209248_10234720	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027846\|Ga0209180_10180894	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300031128\|Ga0170823_15103596	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300031446\|Ga0170820_16066075	Not Available	633	Open in IMG/M
3300031474\|Ga0170818_105175370	Not Available	799	Open in IMG/M
3300031543\|Ga0318516_10305488	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031543\|Ga0318516_10393431	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031545\|Ga0318541_10079838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1729	Open in IMG/M
3300031545\|Ga0318541_10523273	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031561\|Ga0318528_10194538	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300031561\|Ga0318528_10486871	Not Available	662	Open in IMG/M
3300031564\|Ga0318573_10433051	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031572\|Ga0318515_10456211	Not Available	683	Open in IMG/M
3300031572\|Ga0318515_10694509	Not Available	539	Open in IMG/M
3300031573\|Ga0310915_10439258	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031573\|Ga0310915_10757188	Not Available	684	Open in IMG/M
3300031640\|Ga0318555_10366016	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031668\|Ga0318542_10091646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300031680\|Ga0318574_10641849	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031681\|Ga0318572_10027898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2906	Open in IMG/M
3300031681\|Ga0318572_10078645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1828	Open in IMG/M
3300031681\|Ga0318572_10358144	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300031682\|Ga0318560_10211294	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300031719\|Ga0306917_10173032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1618	Open in IMG/M
3300031719\|Ga0306917_10794614	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031723\|Ga0318493_10887568	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031724\|Ga0318500_10287353	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031736\|Ga0318501_10534262	Not Available	641	Open in IMG/M
3300031736\|Ga0318501_10727456	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031744\|Ga0306918_10174786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1604	Open in IMG/M
3300031747\|Ga0318502_10103084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1584	Open in IMG/M
3300031747\|Ga0318502_10169926	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300031753\|Ga0307477_10021397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4419	Open in IMG/M
3300031763\|Ga0318537_10180379	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031771\|Ga0318546_10005811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6142	Open in IMG/M
3300031771\|Ga0318546_10350274	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300031771\|Ga0318546_10452188	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300031777\|Ga0318543_10111773	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300031777\|Ga0318543_10341393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	670	Open in IMG/M
3300031777\|Ga0318543_10523816	Not Available	531	Open in IMG/M
3300031779\|Ga0318566_10296395	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031780\|Ga0318508_1126628	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031782\|Ga0318552_10191635	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031782\|Ga0318552_10462282	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031792\|Ga0318529_10019525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2680	Open in IMG/M
3300031794\|Ga0318503_10133463	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031794\|Ga0318503_10149954	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031795\|Ga0318557_10038413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1971	Open in IMG/M
3300031796\|Ga0318576_10185919	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031797\|Ga0318550_10125137	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300031797\|Ga0318550_10388219	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031797\|Ga0318550_10537126	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031798\|Ga0318523_10322188	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031799\|Ga0318565_10440738	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031819\|Ga0318568_10066613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2106	Open in IMG/M
3300031821\|Ga0318567_10046427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2230	Open in IMG/M
3300031832\|Ga0318499_10254467	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031833\|Ga0310917_10506440	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031833\|Ga0310917_10709961	Not Available	681	Open in IMG/M
3300031833\|Ga0310917_11101077	Not Available	530	Open in IMG/M
3300031835\|Ga0318517_10424468	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031845\|Ga0318511_10425020	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031845\|Ga0318511_10623871	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031846\|Ga0318512_10627176	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031846\|Ga0318512_10655465	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031860\|Ga0318495_10051796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1819	Open in IMG/M
3300031860\|Ga0318495_10267463	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031879\|Ga0306919_11516016	Not Available	504	Open in IMG/M
3300031880\|Ga0318544_10199003	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031893\|Ga0318536_10238535	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300031894\|Ga0318522_10349963	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031897\|Ga0318520_10625381	Not Available	670	Open in IMG/M
3300031910\|Ga0306923_10499930	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300031910\|Ga0306923_10974673	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300031910\|Ga0306923_11727585	Not Available	645	Open in IMG/M
3300031912\|Ga0306921_11340730	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300031912\|Ga0306921_12498786	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031941\|Ga0310912_11470569	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031942\|Ga0310916_10506596	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300031945\|Ga0310913_10028606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3531	Open in IMG/M
3300031945\|Ga0310913_10035820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3184	Open in IMG/M
3300031945\|Ga0310913_11014420	Not Available	581	Open in IMG/M
3300031945\|Ga0310913_11033048	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031946\|Ga0310910_11183918	Not Available	593	Open in IMG/M
3300031962\|Ga0307479_11677923	Not Available	589	Open in IMG/M
3300032001\|Ga0306922_12284219	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032009\|Ga0318563_10496238	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032010\|Ga0318569_10166111	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300032025\|Ga0318507_10341303	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300032035\|Ga0310911_10034724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2543	Open in IMG/M
3300032041\|Ga0318549_10445218	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300032042\|Ga0318545_10295479	Not Available	582	Open in IMG/M
3300032043\|Ga0318556_10071702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1716	Open in IMG/M
3300032043\|Ga0318556_10620272	Not Available	564	Open in IMG/M
3300032051\|Ga0318532_10245313	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300032055\|Ga0318575_10479194	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032055\|Ga0318575_10694807	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300032065\|Ga0318513_10058548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1739	Open in IMG/M
3300032065\|Ga0318513_10347591	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300032065\|Ga0318513_10386801	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300032065\|Ga0318513_10407115	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032066\|Ga0318514_10210943	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300032067\|Ga0318524_10349532	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300032068\|Ga0318553_10054211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1981	Open in IMG/M
3300032261\|Ga0306920_100503447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.27%
Host-Associated	Host-Associated	1.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.95%
Aquatic	Environmental → Aquatic	2.31%
Plants	Host-Associated → Plants	1.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.95%
Freshwater	Environmental → Aquatic → Freshwater	2.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.16%
Roots	Host-Associated → Plants → Roots	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.60%
Loam	Environmental → Terrestrial → Soil → Loam	5.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.16%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.16%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.16%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.58%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.58%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1000747411	3300002245	Forest Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLALAVESIGAVF
Ga0062387_1013645722	3300004091	Bog Forest Soil	MVAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAVRPDSGEGLD
Ga0062386_1009114711	3300004152	Bog Forest Soil	LAGPDDPVIIVIGGHDLALSIAEELCALQGHRVVVIWRRDPDFARAVEAIGAVYIATRP
Ga0066690_103744991	3300005177	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRKDPDLGRAVESIGAVFITAARPDSGEGLDRAGVRHAIS
Ga0070714_1023384232	3300005435	Agricultural Soil	MRESAVAEPGDPVMIVVGGGAIALNTAQELCALQGHRVVVLWRRDPDLGRAVENIGAAFIAAA
Ga0070763_107731561	3300005610	Soil	VVEPGDPVMVVVGGGAIALSTVQELCALQGHRVVVLWRREPDFSRAVESIGAVHV
Ga0066903_1002683661	3300005764	Tropical Forest Soil	VSAPDDPAMIVVGGGAIALSTVEELCSLRGHRVVVLWRRDSDFARTVEAIGAVFIAAARPDSAEGLGRAGVRDAITIL
Ga0066903_1055210922	3300005764	Tropical Forest Soil	MASDVPAPDDPVMIVVGGGAIALSTAQQLCSFQGHRVVLLCRGDSDFARAVEAIGAVFIA
Ga0070717_103168703	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRSDPDLGRAVEDIGAVFIAAARPDSGGGLERAGV
Ga0079220_113622112	3300006806	Agricultural Soil	VVGEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVENIGAVFITASRPDSGEGL
Ga0079220_119514571	3300006806	Agricultural Soil	MPDPDDPVMIVVGGGAIALTTTQELCCLKGHRVVVLWRRDPDFAHAVENVGAIFIAAARPDSSEGLDRAGV
Ga0075434_1004244742	3300006871	Populus Rhizosphere	MTKPDDPVMIIVRGDAIALGSVQAPCALQRHRVVVLWRQASGLALAVEGVGAVFIAAVRPDGSVQF*
Ga0099795_102200571	3300007788	Vadose Zone Soil	VAAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRSDPDLARAVEGIGAVF
Ga0126373_104940133	3300010048	Tropical Forest Soil	VADPDDLAIIVVGGGQIALSTVQELRTVRGHRVVVLWRRDSDFARAMEDARAIFIAAARPDSSEGLERDAR*
Ga0126373_105652032	3300010048	Tropical Forest Soil	MIVGGGGAIALSTTQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAARPDSTEAL
Ga0126373_119204561	3300010048	Tropical Forest Soil	VADPDDLVIIIVGGGQIALSTAQEICGLPGHHVVVLWRRDPDLARAVEGAGAVFVAA
Ga0126373_128451631	3300010048	Tropical Forest Soil	VAEPDDPVMIIVGGGAIALGTAQELCALQGHRVTVLWRRDPDFARAIESIGAVFIAVPRPDSAEGLERAGVHHAITILALSP
Ga0074045_106893362	3300010341	Bog Forest Soil	VRQAELAGPDDPVIIVIGGHDLALSIAEELCALQGHRVVVIWRRDPDFARAVEAIGAVYIATRPDSVEGLERAG
Ga0126370_118633781	3300010358	Tropical Forest Soil	LRAAAVAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFMTAARPDSGEGLDRAGVRHAISILAL
Ga0126381_1004152863	3300010376	Tropical Forest Soil	VAAPDDPVMIVVGGGAIALSTVQELCAMDEHRVVVLWRRDPDFARAVEGIGAVFIAAARPDSAEGLARAGVRQAITILAPCTLRFSRATP*
Ga0126381_1008825212	3300010376	Tropical Forest Soil	VADPDDLAIIAVGGGQIALSTVQELRTVRGHRVVVLWRRDSDFARAMEDARAIFIAAARPDSSEGLERDAP*
Ga0126383_120865981	3300010398	Tropical Forest Soil	VAEPDDPVMIIVGGGAIALGTAQELCALQGHRVTVLWRRDPDFARAIESIGAVFIAA
Ga0126383_136143052	3300010398	Tropical Forest Soil	LRKAAVAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFMTAARPDSGEGLDRAGVRHAISILALSPD
Ga0137395_106119781	3300012917	Vadose Zone Soil	LAEPGDPVMIVVGDGAIALDTAQELCALQGHRVVVLWRRDPDCTRAVEDIGAVHIAAARPDSTEALDRAGVRDAVT
Ga0137396_101069671	3300012918	Vadose Zone Soil	PAPSTPILPFRKVEETRVAEPNDPVMIIVGGGAIALDTAQELCALQGHRVVVLWHRDPDFTRAVEDIGAVHIAAARPDSTEALDPRSVAR*
Ga0126375_101496403	3300012948	Tropical Forest Soil	MIVVGGGAIALSTAQELCSLQGHRVVVLWRRDSDFARAVEAIGAVFIAAARP
Ga0182036_104862211	3300016270	Soil	VAEAGDPVMVVVVGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVESIGAVHIAAARPDSAEALDRAGVR
Ga0182035_101561543	3300016341	Soil	VAEPDDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAPRP
Ga0182040_1000076814	3300016387	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDSDFARAVEGIGAVHI
Ga0182040_100367541	3300016387	Soil	LIVLGGGAITLGTAQELCALQDNRVVVLWRRDPDFTRAVEGIGAVHIAAPRPDS
Ga0182040_107108412	3300016387	Soil	VAEPDDPLMIVVGGGAIALSTTQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAPRPDSA
Ga0182040_110443702	3300016387	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVENIGAVFMTAARPDSGE
Ga0182040_110996001	3300016387	Soil	VAELDDPVMIVVGGGAIALGTTQELCMLQGHRVVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVEA
Ga0182037_101528193	3300016404	Soil	VADPEDLVIIIIVGGGQIALSTAQELCGLPGHHVVVLWRRDPDLARAVEGAGAVFVAAARPDSSEGLERAGV
Ga0182037_102392983	3300016404	Soil	MAEPDDPVLIVVGGGAIALNTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVY
Ga0182037_106025562	3300016404	Soil	MIVVGGGAIALGTVQELCALQGHRVVVLWRRDPDFSRAVENIGAVYIAA
Ga0182038_105685161	3300016445	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGA
Ga0182038_106859722	3300016445	Soil	VAEPDDPVMIVVGGGAIALSTTQELCALPGHRVVVLWRRDPDFTRAVEGIGAVHIAVPRPDSAEALDRAGVRHAVTIL
Ga0182038_110809012	3300016445	Soil	VTEPGDPVMIVVGGGAIALRTTQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAARP
Ga0182038_115837271	3300016445	Soil	VAEPDDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFTRAVEGIG
Ga0187814_103526921	3300017932	Freshwater Sediment	VAGPDDPVMIVVGGGAIALSTAQELCTLRGHRVVVLWRRDPDFARAVEGIGAVFITAARP
Ga0187779_113724501	3300017959	Tropical Peatland	VAEPDDPVMIVVGGSEIALSTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVFIATARPDSAEGLDR
Ga0210408_100133121	3300021178	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRSDPDLGRAVEDIGAVFIAAARPDSGEGRESAGVR
Ga0210408_103604212	3300021178	Soil	VAEPDDPVMIVIGGGAIALSTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVFIT
Ga0213873_100691192	3300021358	Rhizosphere	VTGSDDPVMIVLGGDQLALDTAQELCLLQGHRVIVVWRRDLDFERAVEAVGAVFIAGQPDSPEA
Ga0213874_104431691	3300021377	Plant Roots	VVAEPGDPVMIVVGGGAIALGTAQELCELQGHRVVVLWRSDPDLARAVESIGAVF
Ga0210386_101171773	3300021406	Soil	VRELAVSGDPVLIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVESIG
Ga0210410_101893703	3300021479	Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSG
Ga0210410_111795231	3300021479	Soil	VAEPDDPVMIVIGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVEGIGAVF
Ga0126371_100219551	3300021560	Tropical Forest Soil	VAAPDDPVMIVVGGGAIALSTVQELCAMDEHRVAVLWRRDPDFARAVEGIG
Ga0126371_101584912	3300021560	Tropical Forest Soil	VADPDDLAIIVVGGGQIALSTVQELRTVRGHRVVVLWRRDSDFARAMEDARAIFIAAARPDSSEGLERDAR
Ga0126371_124403321	3300021560	Tropical Forest Soil	VAEPDDPLMIVVGGGAIALSTTQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAASRPDSVEALDRAGVRH
Ga0222728_10461651	3300022508	Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFIT
Ga0242663_10816332	3300022523	Soil	LTKPVVAEPDDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFI
Ga0242669_11322032	3300022528	Soil	LTKPVVAEPDDPVMIVVGGGAIALGTAQELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSAEGLDRAGVHHAVTILALS
Ga0242658_11367471	3300022530	Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSA
Ga0242655_100012473	3300022532	Soil	LTKPVVAEPDDPVMIVVGGGAIALGTAQELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARP
Ga0242655_100694331	3300022532	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRSDPDLGRAVEDIGAVFIAAARPDSGEGLERAGV
Ga0222756_10190482	3300022709	Soil	LTKPVVAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSAEGLDRA
Ga0242661_10286691	3300022717	Soil	VAEPGDPVMIVVGGGAIALSTAEELCARQGHRVVVLWRRDPDLARAVESIG
Ga0242675_10864822	3300022718	Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAAR
Ga0242665_101445792	3300022724	Soil	MGSSTPILPIRRAEEPALAEPGDPVMIVVGDGAIALDTAQELCALQGHRIAVLWRRDPDFARAVEDIGAVHITAARPDSTEALDRAGVRDAV
Ga0242654_100155703	3300022726	Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRREPDLARAVESIGAVFITAARPDRGEGLDRAGVRH
Ga0257160_10662881	3300026489	Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSGEGLDRAG
Ga0257159_10432582	3300026494	Soil	VAEPDDPVMIVIGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVEGIGAVFITAPRPDSGEGLDRAGVRHAVTIL
Ga0208369_10137092	3300026998	Forest Soil	VRELAVSGDPVLIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVESIGAVFIT
Ga0209622_11050392	3300027502	Forest Soil	LTNPVVAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLARAVESIGAAFITAARPDSGEGL
Ga0209331_10532681	3300027603	Forest Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSGEGL
Ga0209248_102347202	3300027729	Bog Forest Soil	VVAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFIT
Ga0209180_101808942	3300027846	Vadose Zone Soil	VVKPDDPVMIVVGGGAIALSTAQELCTLQGHRVVVLWRRDPDLARAVEDAGAVFIAAARP
Ga0170823_151035961	3300031128	Forest Soil	VTEPGDPVMIVVGGGAIALSTTEELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAARPDSTEALDRAVCGTP
Ga0170820_160660752	3300031446	Forest Soil	VAEPGDPVMIVVGGGAIALSTAEELCALQGHRVVVLWRRDPDLARAVESIGAVFITAARPDSGEGLDRAGVRHA
Ga0170818_1051753702	3300031474	Forest Soil	VAGPDDPVMIVVGGGAIALSTVQELCTLQGHRVVVLWLRDPDLARAVEDAGAVFIAAARPDSTEALDRAGEEVF
Ga0318516_103054881	3300031543	Soil	VAAAEPADPVMIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGAVFIAAARPDSSE
Ga0318516_103934311	3300031543	Soil	MVEPDDLVMIVVGGGAIALGTAQELCAMRGHRIVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVE
Ga0318541_100798383	3300031545	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHIT
Ga0318541_105232731	3300031545	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRP
Ga0318528_101945382	3300031561	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSAEALDRAGVRHAVTI
Ga0318528_104868712	3300031561	Soil	MAAPGDPVMIVVGGGAIALGTVQELCALQGHRVVVLWRRDPDFSRAVENIGAVYIAAARPDSAEALDRAGVRHAVTILA
Ga0318573_104330511	3300031564	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDS
Ga0318515_104562112	3300031572	Soil	MAEPDDPVVIVVGGSAIALSTTQELCALERHRVVVLWRRDPDFTRAVEGIGAVHIAAPRPDSAE
Ga0318515_106945091	3300031572	Soil	VAEPDDPVMIVVGGGAIALSTTQELCALPGHRVVVLWRRDPDFTRAVEGIGAVHIAVPRPDSAEALDRAGVQVELIIGRQREYRHCLMHA
Ga0310915_104392582	3300031573	Soil	VKGPLVAELDDPVMIVVGGGAIALSTAQELCALKGHRVVVVWTRDPDFARTVEAIGAVYVGAR
Ga0310915_107571881	3300031573	Soil	MAEPDDPVLIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVYIGARPDSDE
Ga0318555_103660162	3300031640	Soil	MAKPDDPVLIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVYVGAR
Ga0318542_100916463	3300031668	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHVAVARPDSAEALDRAGVRHAVTI
Ga0318574_106418491	3300031680	Soil	VAELDDPVMIVVGGGAIALGTTQELCMLQGHRVVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVEALNRAGVRHAIT
Ga0318572_100278981	3300031681	Soil	VAEPGDPVLIVVGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVETIGAVHIAAARPDSAEALDRAGVRHAVT
Ga0318572_100786453	3300031681	Soil	VAEPGDPVMIVVGGGAIALGTAQELCALQGHRVVVLWHRDSDFARAVEGIGAVHIAAARRALA
Ga0318572_103581442	3300031681	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHV
Ga0318560_102112942	3300031682	Soil	VAEAGDPVMVVVVGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVESIGAV
Ga0306917_101730323	3300031719	Soil	VAETGDPVLIVVGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSAEALDRAGVR
Ga0306917_107946142	3300031719	Soil	MVEPDDLVMIVVGGGAIALGTAQELCAMRGHRIVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVEALDR
Ga0318493_108875681	3300031723	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSAEALDRAG
Ga0318500_102873532	3300031724	Soil	VAEAGDPVMVVVGGGAIALGAAQELCALQGHRVVVLWRQDPDFGRAVESIGAVHIAAARPDSVEALN
Ga0318501_105342621	3300031736	Soil	VAAAEPADPVMIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGTVFIAAARPDSSEGLDRAGVR
Ga0318501_107274562	3300031736	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFMTAARPDSGEGLDR
Ga0306918_101747861	3300031744	Soil	VVAEPGDPVMIVVGGGAIALGTAQELCALQGHRVVVLWRRDPDLAHAVESIGAVFITA
Ga0318502_101030841	3300031747	Soil	VAEAGDPVMVVVVGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVESIGAVHIAAARPDSAEALDRA
Ga0318502_101699261	3300031747	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFMTAARPDSGEGLDRAGVRH
Ga0307477_100213974	3300031753	Hardwood Forest Soil	MAAPGDPVMIVVGGGAIVLGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHIAVARPDSAEALDRAG
Ga0318537_101803791	3300031763	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHI
Ga0318546_100058115	3300031771	Soil	VAAAEPADPVMIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGAVFIAAARPDSSEGLDRAGVRHAITI
Ga0318546_103502741	3300031771	Soil	VAETGDPVLIVVGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSA
Ga0318546_104521881	3300031771	Soil	VAEPDDPVMIVVGGGAIALSTTQELCALPGHRVVVLWRRDPDFTRAVEGIGAVHIAVPRPDSAEALDRAGVHQAVTI
Ga0318543_101117732	3300031777	Soil	VAEPDDPVMIVVGGGAIALSTTQELCALPGHRVVVLWRRDPDFTRAVEGIGAVHIAVPRPDSAEALDRAGVHQAV
Ga0318543_103413931	3300031777	Soil	VAAAEPADPVMIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGAVFIA
Ga0318543_105238162	3300031777	Soil	VADPDDLVIIIVGGGQIALSTAQEICGLPGHHVVVLWRRDPDLARAVEGAGAVFVAAARPDSSE
Ga0318566_102963952	3300031779	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRP
Ga0318508_11266281	3300031780	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSSEALDRAGVRHAVTILALSPD
Ga0318552_101916352	3300031782	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRQDPDFGRAVESIGAVHIAAARPDSVEALNRVGVRDAVTI
Ga0318552_104622821	3300031782	Soil	VAEAGDPVMVVVGGGAIALGAAQELCALQGHRVVVLWRQDPDFGRAVESIGAVHIAAARPDSVE
Ga0318529_100195251	3300031792	Soil	VADPDDLVIIIVGGGQIALSTAQEICGLPGHHVVVLWRRDPDLARAVEGAGAVFVAAARPDSSEGLERAGVQR
Ga0318503_101334632	3300031794	Soil	VAEAGDPVMVVVVGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVESIGAVHIAAARPDSA
Ga0318503_101499541	3300031794	Soil	VAEPGDPVLIVLGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSAEALDRAGVR
Ga0318557_100384131	3300031795	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSSE
Ga0318576_101859191	3300031796	Soil	MAAPGDPVMIVVGGGAIALGTVQELCALQGHRVVVLWRRDPDFSRAVENIGAVHIAVARPDSADILH
Ga0318550_101251372	3300031797	Soil	MTAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHVA
Ga0318550_103882191	3300031797	Soil	MAEPDDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAPRPDSAEALDRAGVRHAI
Ga0318550_105371261	3300031797	Soil	MAKPDDPVLIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVYIGARPDSDEGL
Ga0318523_103221881	3300031798	Soil	MAEPDDPVLIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVY
Ga0318565_104407381	3300031799	Soil	VAEPGDPVMIVVGGGASALGTAQELCALQGHRVVVLWHRDSDFARAVEGIGAVHIAAA
Ga0318568_100666133	3300031819	Soil	VAETGDPVLIVVGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSADVLH
Ga0318567_100464273	3300031821	Soil	VAEPGDPVLIVLGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARRAL
Ga0318499_102544671	3300031832	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHIAVARPDSAEALDRAGVRHAVTI
Ga0310917_105064402	3300031833	Soil	MVEPDDLVMIVVGGGAIALGTAQELCAMRGHRIVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVEALDRAGV
Ga0310917_107099611	3300031833	Soil	VKGPLVAELDDPVMIVVGGGAIALSTAQELCALKGHRVVVVWTRDPDFARTVEAIGAVYVGARPDSVEALDRA
Ga0310917_111010771	3300031833	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSAEALDRAGV
Ga0318517_104244682	3300031835	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAV
Ga0318511_104250202	3300031845	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFMTAARPDSGEGLDRAGVRHAISILALSP
Ga0318511_106238712	3300031845	Soil	VAEAGDPVMVVVVGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVESIG
Ga0318512_106271762	3300031846	Soil	VAELDDPVMIVVGGGAIALGTTQELCMLQGHRVVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVEALNRAD
Ga0318512_106554652	3300031846	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFM
Ga0318495_100517961	3300031860	Soil	VAEAGDPVMVVVVGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVESIGAVHIAAARPDSAEALDRPR
Ga0318495_102674631	3300031860	Soil	VAEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFMTAARPDSGEGLDRAGV
Ga0306919_115160161	3300031879	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSSEALDRAG
Ga0318544_101990032	3300031880	Soil	VAAAEPADPVMIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGAVFIAAARPDSSEGLDRAGVRHAITIL
Ga0318536_102385352	3300031893	Soil	VAETGDPVLIVVGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSAEALD
Ga0318522_103499632	3300031894	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHVAVARP
Ga0318520_106253812	3300031897	Soil	MAEPDDPVLIVVGGGAIALNTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVYVGARPDSDEGLDR
Ga0306923_104999301	3300031910	Soil	MAEPDDPVLIVVGGGAIALNTAQELCALQGHRVVVLWRRDPDFARAVEGIGAVYIGARPDSDEGLDRAGVRHAVT
Ga0306923_109746732	3300031910	Soil	VVAEPGDPVMIVVGGGAIALGTAQELCALQGHRVVVLWRRDPDLAHAVESIGAVF
Ga0306923_117275851	3300031910	Soil	VKGPLVAELDDPVMIVVGGGAIALSTAQELCALKGHRVVVVWTRDPDFARTVEAIGAVY
Ga0306921_113407302	3300031912	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHIAVARPDSAEALDRAGVRHAVTIL
Ga0306921_124987861	3300031912	Soil	VEEPGDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDLGRAVENIGAVFIAAARPDSGEGLDRAGVRHAISIL
Ga0310912_114705691	3300031941	Soil	VADPDDLVIIIVGGGQIALSTAQEICGLPGHHVVVLWRRDPDLARAVEGA
Ga0310916_105065962	3300031942	Soil	MAEPDDPVVIVVGGGAIALSTTQELCALERHRVVVLWRRDPDFTRAVEGIGAVHIAAPRP
Ga0310913_100286063	3300031945	Soil	VAEAGDPVMVVVGGGAIALGTAQELCALQGHRVVVLWRRDPDFSRAVESIGA
Ga0310913_100358201	3300031945	Soil	MIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGAVFIAAARPDSSEGLDRAGVR
Ga0310913_110144201	3300031945	Soil	VAEPDDPLMIVVGGGAIALSTTQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIA
Ga0310913_110330481	3300031945	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHIT
Ga0310910_111839182	3300031946	Soil	MAEPDDPVMIVVGGGAIALSTTQELCALERHRVVVLWRRDPDFTRAVEGIGAVHIAAPRPDSAEALDRAGVRHA
Ga0307479_116779232	3300031962	Hardwood Forest Soil	MAPPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHIAVARPDSAEALDRAGVRHAV
Ga0306922_122842191	3300032001	Soil	MAETDDPVMIVVGGGAIALSTAQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAA
Ga0318563_104962382	3300032009	Soil	VAEPDDPLMIVVGGGAIALSTTQELCALQGHRVVVLWRRDPDFTRAVEGIGAVHIAAPRP
Ga0318569_101661112	3300032010	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHVAVARPDSAEALDRAG
Ga0318507_103413032	3300032025	Soil	VADPDDPVMIVVGGGAIALSTAQALCALQGHRVVVLWRRDPDFARAVEGIGAVFITAARPDSSEGLDRAGVRHAIT
Ga0310911_100347243	3300032035	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAP
Ga0318549_104452181	3300032041	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHVAV
Ga0318545_102954792	3300032042	Soil	MAAPGDPVMIVVGGGAIALGTVQELCALQGHRVVVLWRRDPDFSRAVENIGAVYIAAARPDSAEALDRAG
Ga0318556_100717023	3300032043	Soil	VAAAEPADPVMIVVGGGAIALSTVQELCAMQGHRVVVLWRRDSDFARAVESIGAVFIAAARPDSSEGLDRAGVR
Ga0318556_106202721	3300032043	Soil	VTEPDDPVMIVVGGGAIALSTTQELCALQGHRVVVLWRRDPDFTRAVEAIGAVHI
Ga0318532_102453132	3300032051	Soil	VKGPLVAELDDPVMIVVGGGAIALSTAQELCALKGHRVVVVWTRDPDFARTVEAIGAMYV
Ga0318575_104791942	3300032055	Soil	VKGPLVAELDDPVMIVVGGGAIALSTAQELCALKGHRVVVVWTRDPDFARTVEAIGAVYV
Ga0318575_106948072	3300032055	Soil	MAAPGDPVMIVVGGGAIALGTTQELCALQGHRVVVLWRRDPDFSRAVENIGAVHVAVARPDSAEA
Ga0318513_100585483	3300032065	Soil	VAETGDPVLIVVGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSAE
Ga0318513_103475911	3300032065	Soil	VKGPLVAELDDPVMIVVGGGAIALSTAQELCALKGHRVVVVWTRDPDFARTVEAIGAVYVGARPDIH
Ga0318513_103868012	3300032065	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSSEALDRAGVRH
Ga0318513_104071152	3300032065	Soil	MVEPDDLVMIVVGGGAIALGTAQELCAMRGHRIVVLWRRDPDFTRAVEGIGAVHLAAPRPDSVEALDRAGVRHA
Ga0318514_102109432	3300032066	Soil	VAELDDPVMIVVGGGAIALGTVQELCAMQGHRIVVLWRRDPDFTRAVEGIGAVHLAAPPT
Ga0318524_103495322	3300032067	Soil	VAEPDDPLMIVVGGGAIALGTAQELCSLPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSAEALDRAGVRHAVTI
Ga0318553_100542113	3300032068	Soil	LIVLGGGAITLGTAQELCALQGHRVVVLWRRDPDFTRAVENIGAVHIAAARPDSAEALDRAGVR
Ga0306920_1005034471	3300032261	Soil	VAEPDDPLMIVVGGGAIALGTTQELCSPPGHRVVVLWRRDPDFTRAVEGIGAVHITAPRPDSAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034840

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences