NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F033519

Metagenome / Metatranscriptome Family F033519

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F033519
Family Type Metagenome / Metatranscriptome
Number of Sequences 177
Average Sequence Length 63 residues
Representative Sequence PTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Number of Associated Samples 142
Number of Associated Scaffolds 177

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.65 %
% of genes near scaffold ends (potentially truncated) 80.79 %
% of genes from short scaffolds (< 2000 bps) 79.66 %
Associated GOLD sequencing projects 127
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (53.672 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(10.169 % of family members)
Environment Ontology (ENVO) Unclassified
(45.198 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.452 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102
1KansclcFeb2_04650400
24MG_04944890
3JGI10216J12902_1031385132
4JGIcombinedJ26739_1013907811
5Ga0062589_1017764001
6Ga0063356_1008955601
7Ga0063356_1031504421
8Ga0062592_1002575801
9Ga0062591_1007006462
10Ga0062591_1018966282
11Ga0062591_1026962501
12Ga0062383_105031781
13Ga0062382_102638762
14Ga0062594_1019035841
15Ga0066683_104727932
16Ga0065715_101677011
17Ga0065707_104363811
18Ga0070670_1013899611
19Ga0066388_1019741941
20Ga0070680_1010091491
21Ga0068868_1017282601
22Ga0070660_1004809282
23Ga0070675_1020643581
24Ga0070674_1001629223
25Ga0070673_1018590471
26Ga0070688_1002189501
27Ga0068867_10000932211
28Ga0068867_1013891922
29Ga0070706_1016724421
30Ga0070707_1009555241
31Ga0070707_1014072101
32Ga0070698_1000848761
33Ga0068853_1005716931
34Ga0070672_1012598871
35Ga0070665_1003477451
36Ga0070665_1004918621
37Ga0070664_1008296392
38Ga0070702_1008885462
39Ga0068852_1027798401
40Ga0068859_1012339951
41Ga0068859_1023361782
42Ga0068864_1015748571
43Ga0066905_1002688431
44Ga0068866_112870292
45Ga0068858_1010694021
46Ga0068858_1013176642
47Ga0068860_1025682532
48Ga0075029_1000693312
49Ga0070765_1006182771
50Ga0068871_1016542361
51Ga0075521_106394732
52Ga0075428_1021356332
53Ga0075428_1024624452
54Ga0075421_1017864192
55Ga0075430_1006791941
56Ga0075430_1007383881
57Ga0075431_1000087389
58Ga0068865_1009380142
59Ga0068865_1011765032
60Ga0068865_1014869962
61Ga0079216_103395771
62Ga0105240_109215621
63Ga0105240_120695002
64Ga0111539_105204343
65Ga0111539_107112822
66Ga0111539_112947361
67Ga0105245_105222952
68Ga0075418_128371551
69Ga0105243_101669681
70Ga0105243_126147921
71Ga0105243_128783761
72Ga0111538_109481591
73Ga0111538_111185192
74Ga0111538_114641982
75Ga0105242_127874022
76Ga0105248_119608161
77Ga0105248_124315581
78Ga0105238_107241441
79Ga0105249_112524222
80Ga0105347_13850591
81Ga0105061_10898581
82Ga0126305_104190582
83Ga0126311_113737261
84Ga0134121_116390811
85Ga0134123_102802591
86Ga0134123_118761652
87Ga0105246_100581381
88Ga0137363_107236701
89Ga0157293_102448891
90Ga0137413_113607711
91Ga0164298_108470312
92Ga0164298_112078981
93Ga0164303_112421551
94Ga0164301_109942751
95Ga0126369_124859212
96Ga0164304_102711851
97Ga0164307_107748252
98Ga0164305_118023221
99Ga0157307_11815672
100Ga0157378_124300022
101Ga0163162_117975341
102Ga0157375_137158241
103Ga0163163_105823591
104Ga0157380_1000230316
105Ga0157380_105379523
106Ga0157380_124351041
107Ga0173483_107794972
108Ga0173480_106100373
109Ga0190269_109531252
110Ga0190274_114359392
111Ga0190274_134494931
112Ga0190271_104055931
113Ga0190264_106426171
114Ga0163150_102761972
115Ga0210399_106982582
116Ga0222622_104637623
117Ga0207682_103675191
118Ga0207642_102984001
119Ga0207642_111565112
120Ga0207680_106374141
121Ga0207645_108737171
122Ga0207662_105069621
123Ga0207646_116571972
124Ga0207650_110038591
125Ga0207650_110184832
126Ga0207659_115837311
127Ga0207670_103040522
128Ga0207669_100254153
129Ga0207669_117965471
130Ga0207691_115219091
131Ga0207711_101360503
132Ga0207689_109100321
133Ga0207712_113563561
134Ga0207668_115220022
135Ga0207677_117157642
136Ga0207677_121007131
137Ga0207708_107076831
138Ga0207676_115339152
139Ga0207676_116905461
140Ga0207683_113223732
141Ga0179587_111018201
142Ga0209579_101353481
143Ga0207428_106327212
144Ga0209382_110259761
145Ga0209382_123393881
146Ga0268266_112654411
147Ga0268265_106674422
148Ga0268265_118782892
149Ga0268264_112126852
150Ga0247828_100958422
151Ga0247825_106627562
152Ga0170824_1050991212
153Ga0170824_1216553732
154Ga0307408_1011302831
155Ga0307405_118477552
156Ga0307468_1000582273
157Ga0310907_105724431
158Ga0310904_100112641
159Ga0310892_102686201
160Ga0310893_105159271
161Ga0310900_104780272
162Ga0310900_105771423
163Ga0310891_100350391
164Ga0310885_106900511
165Ga0307416_1020543912
166Ga0310906_108254752
167Ga0310899_100659321
168Ga0310890_103262622
169Ga0310890_118141481
170Ga0318577_101535911
171Ga0310896_100947782
172Ga0310810_102949043
173Ga0310811_114441461
174Ga0247829_103508702
175Ga0247830_107120401
176Ga0364945_0033026_1203_1337
177Ga0314793_033564_639_872
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 33.71%    Coil/Unstructured: 66.29%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560PTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
46.3%53.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Microbial Mat
Wetland Sediment
Soil
Watersheds
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Surface Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Arctic Peat Soil
Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Groundwater Sand
Sediment
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass, Maize And Mischanthus Litter
10.2%3.4%10.2%4.0%6.2%6.8%9.0%2.8%3.4%5.1%5.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_046504002124908045SoilLKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
4MG_049448902170459019Switchgrass, Maize And Mischanthus LitterRGEAGEGTVVAARCSPSNQITQYWIQKPNGGRFWATLQELKPL
JGI10216J12902_10313851323300000956SoilVYELTDKGIFSLTSLLLPGSPTSSNPPDCFTLKVDAKVLGESGEGVVVGARCSPSNRITQYWVQKANGDRFWASLQELKIR*
JGIcombinedJ26739_10139078113300002245Forest SoilPQDCFALKVNAKVGGEAGEGIVVGARCSPSNKITQYWIQKTSGERFWATFQELKTR*
Ga0062589_10177640013300004156SoilIYELTDKGVFSLTSLLLPGDAVSSYPPKCFALRINARVSGVLGKGRVVGARCSPTNQITEYWVQKSNGQRFWATFQQLRQL*
Ga0063356_10089556013300004463Arabidopsis Thaliana RhizosphereLVDPVYELTDRGALLLTSLLQPGRPTSLSPQDCFALRIGAQVRGDNGEGTVVRARCSPANQLTQYRVRKPNGERFWATREQLKPL*
Ga0063356_10315044213300004463Arabidopsis Thaliana RhizosphereVVEPVYELTDKGVFSLTSLLLPGRPTSSSPPDCFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWIQKPNGERFWATLQQLKKR*
Ga0062592_10025758013300004480SoilDCFVLKVNDKVRGDAGEGSVIRARCSPSNKLTQYWVQKPNGDRFWATLQQLQKR*
Ga0062591_10070064623300004643SoilNDKVRGDAGEGSVVGARCSPSNRITQYWVQKPNGERFWATLQQLQKR*
Ga0062591_10189662823300004643SoilVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0062591_10269625013300004643SoilVRGDAGEGSVVAARCSPSNKITQYWVQKPNGERFWATLEQLQRR*
Ga0062383_1050317813300004778Wetland SedimentLLPGRPTSSSPPDCFALKMNAKVRGELGEGLVVGARCSPSNQITQYWVHKSNGERFWATRQELKAQ*
Ga0062382_1026387623300004782Wetland SedimentVNDQVLGDAGEGRVVGARCSPSNKITQYWIQKLNGERFWATLQQLKKH*
Ga0062594_10190358413300005093SoilSSSPPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPSGERFWATLQQLKRR*
Ga0066683_1047279323300005172SoilGVFLLTSLLQPGSPTQSSPPDCFVLKIGTRVHGDAGEGTVVGTRCSPANQLTQYWVRKPNGERFWATAQELKPM*
Ga0065715_1016770113300005293Miscanthus RhizosphereGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWIQNANGERFWASLQELKNR*
Ga0065707_1043638113300005295Switchgrass RhizosphereEAGEGLVVGARCSPSNQITQYWVQKSNGERFWTTFQELKPR*
Ga0070670_10138996113300005331Switchgrass RhizosphereFSLISLLLPGRPTSSSPPDCFALKVNDKVRGDAGEGSVVGTRCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0066388_10197419413300005332Tropical Forest SoilLLQPGRPTQSTPPDCFVLQIGTHVRSDAGEGTVVGARCSPANQLTQYWVRKANGERFWATAQNVKPI*
Ga0070680_10100914913300005336Corn RhizosphereTDLLRIFSLTSLLLPGSPTSSNPPDCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0068868_10172826013300005338Miscanthus RhizosphereVYELTDKGIFSLTSLLLPGSPTSSNPKDCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQEANGERFWASLQELKIR*
Ga0070660_10048092823300005339Corn RhizosphereSTVVEPVYELTDEGVFSLTSLLLPGRPTSSSPPDCFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0070675_10206435813300005354Miscanthus RhizosphereSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0070674_10016292233300005356Miscanthus RhizosphereLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0070673_10185904713300005364Switchgrass RhizosphereLTSLLMPGRPTSSSPPDCFTLKMNAKVRGEGGEGLVVGARCSPSNQITQYWIQKSNGERFWATFQELKAR*
Ga0070688_10021895013300005365Switchgrass RhizosphereYELTDQGVFSLTSLLLPGRPTSSSPPDCFTLKVNDKVQGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0068867_100009322113300005459Miscanthus RhizosphereDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068867_10138919223300005459Miscanthus RhizosphereAKVRGEAGEGIVVGARCSPSNQIIQYWVQKANSERFWASFQELKTR*
Ga0070706_10167244213300005467Corn, Switchgrass And Miscanthus RhizosphereDKGIFSLTSLLLPGSPTSSNPPDCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQKANGARFWASFQELKTR*
Ga0070707_10095552413300005468Corn, Switchgrass And Miscanthus RhizosphereGDAGEGSVVGARCSPSNKITQYWVQEPNGERFWATLQQLQQR*
Ga0070707_10140721013300005468Corn, Switchgrass And Miscanthus RhizosphereLLLTSLLQPGSPTQSSPPDCFVLKIGARVHGDAGEGTVVGARCSPANQLTQYWVRKPNGERFWATSQELKPM*
Ga0070698_10008487613300005471Corn, Switchgrass And Miscanthus RhizosphereVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0068853_10057169313300005539Corn RhizosphereNEKGIFSLTSLLLPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0070672_10125988713300005543Miscanthus RhizosphereKGIFSLTSLLLPGRPTSSSPPDCFALKVHAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0070665_10034774513300005548Switchgrass RhizosphereFSLTSLLLPGRPTSSNPPDCFTLKVNAKVLGDLGEGVVVGARCSPSNQITQYWVQKSTGERFWASLQELKSR*
Ga0070665_10049186213300005548Switchgrass RhizosphereTDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0070664_10082963923300005564Corn RhizosphereLKVNDKVHGDAGEGTVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0070702_10088854623300005615Corn, Switchgrass And Miscanthus RhizospherePDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068852_10277984013300005616Corn RhizosphereCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNAERFWATLQELQAQ*
Ga0068859_10123399513300005617Switchgrass RhizosphereELTDKGIFSLTSLLLPGRPTSSNPPDCFMLKVDAKVRGEAGDGIVVGARCSPSNQITQYWVQKANGERFWAGLQELKTR*
Ga0068859_10233617823300005617Switchgrass RhizospherePVYELTDKGIFSLTSLLLPGRPTSSNPPDCFALKVTAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068864_10157485713300005618Switchgrass RhizosphereDCFVLKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0066905_10026884313300005713Tropical Forest SoilSGAVVDPVYELTDKGVLLLNSLVQPGSPTPSSPPDCFALEIGARVYGDAGKGTVIGARCSPANQFTQYWVQKANGERFWATLQELEPM*
Ga0068866_1128702923300005718Miscanthus RhizosphereYELTDKGVFLLTSLLLPGSSTSTSPPGCFALRVDAKVRGEAGEGIVVGARCSPSNQIIQYWVQKANSERFWASFQELKTR*
Ga0068858_10106940213300005842Switchgrass RhizosphereLQPGSPTSSSPADCFALKVNAKVRGEAGEGIVVGARCSPSNQIIQYWVQKANSERFWASFQELKTR*
Ga0068858_10131766423300005842Switchgrass RhizosphereLLPGRPTSSSPPDCFALKINAKVRGEPGEGLVIGARCSPSNQITQYWVQKSNGERFWATLQELKVL*
Ga0068860_10256825323300005843Switchgrass RhizosphereLPGSPTSSTPADCFALKVHAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0075029_10006933123300006052WatershedsPTSSSPPDCFTLKVHAKVRGESGEGIVVGARCSPSNRITQYWVQKANGERFWATLQELKTR*
Ga0070765_10061827713300006176SoilPGTPTSSSPPECFALKVNAKVGGESGEGIVVGARCSPSNKITQYWVQKASGERFWATFQELKIR*
Ga0068871_10165423613300006358Miscanthus RhizosphereLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR*
Ga0075521_1063947323300006642Arctic Peat SoilSSPADCFALKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0075428_10213563323300006844Populus RhizosphereNEKGIFSLTSLLLPGRPTSSSPPDCFALKINAKVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0075428_10246244523300006844Populus RhizospherePTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0075421_10178641923300006845Populus RhizosphereTSSSPPDCFALKVTDEVLGDAGEGRVVAARCSPSNQITQYWIQKPNGDRFWASLQQLKRR
Ga0075430_10067919413300006846Populus RhizospherePGRPTSSSPPDCFALKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATIQELKAR*
Ga0075430_10073838813300006846Populus RhizosphereTIVEPVYELTDKGIFSLTSLLLPGRPTSSTPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0075431_10000873893300006847Populus RhizosphereTDRAALLLTSLLQPGRPTSSSPQDCFALRIGAQVRGDNGEGTVVGARCSPANQLTQYWVRKPNGERLWATREQLKPL*
Ga0068865_10093801423300006881Miscanthus RhizosphereNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068865_10117650323300006881Miscanthus RhizosphereSPPDCFALKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKAR*
Ga0068865_10148699623300006881Miscanthus RhizosphereSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTQ*
Ga0079216_1033957713300006918Agricultural SoilTLVDPVFELTDKGVSMLTSLLQPGSPTSSSPSDCFAFRIGARVQADEGEGTVVGARCSPGNGLTQYWVGKSNGERFWATREQLKAF*
Ga0105240_1092156213300009093Corn RhizosphereEKGIFSLTSLLLPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSSGERFWATLQELQAQ*
Ga0105240_1206950023300009093Corn RhizosphereVNAKVRGEAGGGIVVGAPCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0111539_1052043433300009094Populus RhizosphereFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQRANSERVWASLQELKIR*
Ga0111539_1071128223300009094Populus RhizosphereFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQRANSERFWASLQELKIR*
Ga0111539_1129473613300009094Populus RhizosphereSLTSLLLPGSPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0105245_1052229523300009098Miscanthus RhizosphereSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0075418_1283715513300009100Populus RhizosphereGVPTSSSPPDCFALKVNDQVLGDAGEGRVVGARCSPSNQITQYWIQKPNGERFWATLQQLKRR*
Ga0105243_1016696813300009148Miscanthus RhizosphereCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0105243_1261479213300009148Miscanthus RhizosphereTSNPPDCFTLKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASLQELKTR*
Ga0105243_1287837613300009148Miscanthus RhizosphereLKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKAR*
Ga0111538_1094815913300009156Populus RhizosphereAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0111538_1111851923300009156Populus RhizosphereLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0111538_1146419823300009156Populus RhizosphereLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGGRCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0105242_1278740223300009176Miscanthus RhizosphereALKVNAKVLGEFGEGVVVGARCSPSNQVTQYWVQKANGERFWASLQELKNR*
Ga0105248_1196081613300009177Switchgrass RhizosphereTSSSPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR
Ga0105248_1243155813300009177Switchgrass RhizosphereVEPVYELNEKGIFSLTSILLPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0105238_1072414413300009551Corn RhizosphereTSLLLPGRPTSSNPPDCFALKVDAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0105249_1125242223300009553Switchgrass RhizosphereVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0105347_138505913300009609SoilLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASMQELKIR*
Ga0105061_108985813300009807Groundwater SandPPDCFALKVNAKVRGGAGEGIVVGARCSPSNQITQYWVQKANGERFWAGVQELKTR*
Ga0126305_1041905823300010036Serpentine SoilSLTSLLLPGSPTSSDPPDCFALKVNAKVLGEFGEGVVVGARCSPSNAITQYWVQKANGERFWASLQELKSR*
Ga0126311_1137372613300010045Serpentine SoilVYELTDKGVFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKADSERFWASLQELKIR*
Ga0134121_1163908113300010401Terrestrial SoilKGIFSLTSLLLPGRPTSSSPPDCFALKIHARVRGELGEGLVVGARCSPTNQITQYWVQKSNGERFWATLQELKAQ*
Ga0134123_1028025913300010403Terrestrial SoilNDQVRGDAGEGRVVGARCSPSNQITQYWIQKPNGERFWAALPQLKKR*
Ga0134123_1187616523300010403Terrestrial SoilFSLTSLLLPGRATSSSPPDCFVLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR*
Ga0105246_1005813813300011119Miscanthus RhizospherePVYELNGKGIFLLTSLLLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0137363_1072367013300012202Vadose Zone SoilEKGVFVLTSLLQAGTPTTSGPPDCFALKIGAQVHGDRGEGVVIGARCSPSNHITQYWVREPGGDRFWATLPELKQ*
Ga0157293_1024488913300012898SoilPSRWVKRSKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0137413_1136077113300012924Vadose Zone SoilSSSPPNCFVLKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0164298_1084703123300012955SoilLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCPPSNQITQCWVQKANGERFWASFQELKTR*
Ga0164298_1120789813300012955SoilNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGQRFWASFQELKTR*
Ga0164303_1124215513300012957SoilVYELTDKGIFSLKSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKADGERFWASLQELKNR*
Ga0164301_1099427513300012960SoilTIVEPVYELTDQGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGMVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0126369_1248592123300012971Tropical Forest SoilGTRVHSDAGEGTVVGARCSPANQLTQYWVRRPNGERFWATAQELKPT*
Ga0164304_1027118513300012986SoilVLTSLLQPGTPISSSPADCFALKVGAHVRGERGEGTVVGARCSPANQITEYWVRKSDDKRFWATRQELKAE*
Ga0164307_1077482523300012987SoilTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLPELKIR
Ga0164305_1180232213300012989SoilVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0157307_118156723300013096SoilGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0157378_1243000223300013297Miscanthus RhizosphereNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0163162_1179753413300013306Switchgrass RhizosphereLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0157375_1371582413300013308Miscanthus RhizosphereFSLTSLLSPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0163163_1058235913300014325Switchgrass RhizosphereIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0157380_10002303163300014326Switchgrass RhizosphereSNPPDCFALKVHAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0157380_1053795233300014326Switchgrass RhizosphereSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQVTQYWVQKANGERFWASLQELKNR*
Ga0157380_1243510413300014326Switchgrass RhizosphereLLLPGRATSSSPPDCFVLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR*
Ga0173483_1077949723300015077SoilKVDAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0173480_1061003733300015200SoilFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0190269_1095312523300018465SoilLKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKRR
Ga0190274_1143593923300018476SoilPDCFALKVNDKVHGDAGEGSVVGARCSPSNQITQYWVQKPNGERFWATLQQLQKR
Ga0190274_1344949313300018476SoilDVGEGIVVGARCSPSNQITQYWVQEADGERFWASVQELKTR
Ga0190271_1040559313300018481SoilTVVEPVYELTDEGMFSLTSLLLPGRATSSSPPDCFVLKVNDKVRGADGEGIVVSARCSPSNKITQYWVQKPNGERFWATLQQLQKR
Ga0190264_1064261713300019377SoilPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKKR
Ga0163150_1027619723300020195Freshwater Microbial MatVYELTDKGVFSLTSLLLPGRPTSSSPLDCFSLRINAKVRGDAGEGTIVGARCSPTNQVTQYWVQRPNGERFWAMLQELKPL
Ga0210399_1069825823300020581SoilSSPPDCFTLKVHAKVRGESGEGIVVGARCSPSNRITQYWVQKANGERFWATLQELKTR
Ga0222622_1046376233300022756Groundwater SedimentSSPPDCFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207682_1036751913300025893Miscanthus RhizosphereEPVYELTDKGVFLLTSLLLPGRPTSSSPPDCFVLKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207642_1029840013300025899Miscanthus RhizosphereSSNPPDCFALKANAKVLGEFGEGVVVGARCSPSNQVTQYWVQKANGERFWASLQELKNR
Ga0207642_1115651123300025899Miscanthus RhizosphereVYELTDKGIFSLTSLLLPGRPISSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207680_1063741413300025903Switchgrass RhizosphereVRGGAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207645_1087371713300025907Miscanthus RhizosphereKVLGEFGEGVVVGARCSPSNQITQYWVRKANGERFWASLQELKNR
Ga0207662_1050696213300025918Switchgrass RhizosphereDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207646_1165719723300025922Corn, Switchgrass And Miscanthus RhizosphereINAEVRGEAGEGTVVGARCSPSNQITQYWIQKPNGGRFWATLQELKPL
Ga0207650_1100385913300025925Switchgrass RhizosphereLLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWAGLQELKHDNGASRLIGFSTLTL
Ga0207650_1101848323300025925Switchgrass RhizosphereTDQGVFSLTSLLLPGRPTSSSPPDCFTLKVNDKVQGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207659_1158373113300025926Miscanthus RhizosphereSTVVDSVYELTDKGVFSLTSLLAPGRPISSSPPNCFSLRINAKVRGDLGEGLVVGARCSPANQITEYWVQKKNGQRFWATLQQLRQL
Ga0207670_1030405223300025936Switchgrass RhizosphereVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELNTR
Ga0207669_1002541533300025937Miscanthus RhizosphereFSLTSLLLPGRPTSSNPPDCFALKVHAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207669_1179654713300025937Miscanthus RhizosphereVPDCFVLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR
Ga0207691_1152190913300025940Miscanthus RhizosphereKGIFSLTSLLLPGSPTSSNPPDCFALKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207711_1013605033300025941Switchgrass RhizosphereKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207689_1091003213300025942Miscanthus RhizosphereGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKVR
Ga0207712_1135635613300025961Switchgrass RhizosphereSSNPPDCFALKVNAKVLGEFGDGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR
Ga0207668_1152200223300025972Switchgrass RhizosphereLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207677_1171576423300026023Miscanthus RhizosphereEPVYELTDKGTFLLTSLLLPGSPTSSTPADCFALKVHAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207677_1210071313300026023Miscanthus RhizosphereVYELTDKGIFSLTSLLLPGSPTSSNPKDCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQEANGERFWASLQELKIR
Ga0207708_1070768313300026075Corn, Switchgrass And Miscanthus RhizosphereAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207676_1153391523300026095Switchgrass RhizosphereADCFALKVHAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207676_1169054613300026095Switchgrass RhizosphereVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207683_1132237323300026121Miscanthus RhizosphereSLLLPGSPTSSNPPDCFALKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQEANGERFWASIQELKTQ
Ga0179587_1110182013300026557Vadose Zone SoilLTSLLLPGRPTLSSPPDCFALKINAKVRGDAGEGLVVGARCSPSNQITQYWVQKSNGDRFWATSQELKTR
Ga0209579_1013534813300027869Surface SoilTSLLLPGTPTSSSPSDCFALKVNAKVHGKSGEGIIVGARCSPSNKITQYWVQKANGERFWATFQELKVR
Ga0207428_1063272123300027907Populus RhizosphereLTDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGLVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0209382_1102597613300027909Populus RhizosphereLLLPGVPTSSSPPDCFALKVTDEVLGDAGEGRVVAARCSPSNQITQYWIQKPNGDRFWASLQQLKRR
Ga0209382_1233938813300027909Populus RhizosphereLLLPGRPTSSSPPDCFALKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATIQELKAR
Ga0268266_1126544113300028379Switchgrass RhizosphereSNPPDCFTLKVNAKVLGDLGEGVVVGARCSPSNQITQYWVQKSTGERFWASLQELKSR
Ga0268265_1066744223300028380Switchgrass RhizosphereFSLTSLLLPGRPTSSSPPDCFTLKVNDKVHGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0268265_1187828923300028380Switchgrass RhizosphereLTSLLLPGSPTSSSPADCFALKVNTKVRGDAGEGIVVGARCSPSNQITQYWVHKANGERFWASLQELKTR
Ga0268264_1121268523300028381Switchgrass RhizosphereTSLLMPGIPTSSSSPDCFALKMSAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKAR
Ga0247828_1009584223300028587SoilLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0247825_1066275623300028812SoilPPDCFTLKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGDRFWASLQELKIR
Ga0170824_10509912123300031231Forest SoilKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFKELKAR
Ga0170824_12165537323300031231Forest SoilVLTSLLQPGTPTSSNPPDCFALKVGAAVRSDRGEGTVIGARCSPANQITEYWVKKSNDERFWATLQELKVQ
Ga0307408_10113028313300031548RhizosphereVYELTDKGMFLLTSLLLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCSPANQITQYWVQKANGERFWASFQELKTR
Ga0307405_1184775523300031731RhizosphereLGVFSLTSLLLPGAPTSSSPPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKRR
Ga0307468_10005822733300031740Hardwood Forest SoilSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0310907_1057244313300031847SoilEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310904_1001126413300031854SoilDCFALKVHAKVLGEFGEGVVVGARCSPANQITQYWVQKANSERFWASLQELKIR
Ga0310892_1026862013300031858SoilELTDEGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWIQNANGERFWASLQELKNR
Ga0310893_1051592713300031892SoilLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0310900_1047802723300031908SoilLTSLLLPGSRTSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0310900_1057714233300031908SoilSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGGRCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310891_1003503913300031913SoilIFSLTSLLLPGRPTSSNPPDCFALKVNAKVQGESGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0310885_1069005113300031943SoilEGVVVGARCSPSNQITQYWVQKADGERFWASLQELKNR
Ga0307416_10205439123300032002RhizosphereVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0310906_1082547523300032013SoilPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310899_1006593213300032017SoilIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQQANGERFWASLQELKNR
Ga0310890_1032626223300032075SoilGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310890_1181414813300032075SoilRGVFSLTSLLLPGAPTSSSPPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKRR
Ga0318577_1015359113300032091SoilVYELTEKGVFVLTSLLQPGSPTQSSPPDCFVLKIGTRVHGDAGEGTVVGARCSPANQFTQYWIRKPNGERFWATSQELKRM
Ga0310896_1009477823300032211SoilPVYELTDEGVFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWGSLQELKIR
Ga0310810_1029490433300033412SoilLDCFALKVNAKVLGDFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR
Ga0310811_1144414613300033475SoilLTDKGNFLLTSLLLPGRPTSSNPPDCFALKVDAKVRGEAGGGVVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0247829_1035087023300033550SoilLLPGSPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0247830_1071204013300033551SoilPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0364945_0033026_1203_13373300034115SedimentVRGELDEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ
Ga0314793_033564_639_8723300034668SoilTDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.