Metagenome / Metatranscriptome Family F033519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	63 residues
Representative Sequence	PTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Number of Associated Samples	142
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.65 %
% of genes near scaffold ends (potentially truncated)	80.79 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.672 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.169 % of family members)
Environment Ontology (ENVO)	Unclassified (45.198 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.452 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.71% Coil/Unstructured: 66.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF00069	Pkinase	2.82
PF13191	AAA_16	1.69
PF00692	dUTPase	1.69
PF02452	PemK_toxin	1.13
PF03466	LysR_substrate	1.13
PF01186	Lysyl_oxidase	1.13
PF07110	EthD	1.13
PF00589	Phage_integrase	1.13
PF05015	HigB-like_toxin	1.13
PF04542	Sigma70_r2	1.13
PF13578	Methyltransf_24	1.13
PF03795	YCII	1.13
PF13564	DoxX_2	1.13
PF12543	DUF3738	0.56
PF00561	Abhydrolase_1	0.56
PF04238	DUF420	0.56
PF02776	TPP_enzyme_N	0.56
PF03631	Virul_fac_BrkB	0.56
PF02796	HTH_7	0.56
PF07589	PEP-CTERM	0.56
PF10282	Lactonase	0.56
PF13649	Methyltransf_25	0.56
PF00202	Aminotran_3	0.56
PF13618	Gluconate_2-dh3	0.56
PF13433	Peripla_BP_5	0.56
PF06283	ThuA	0.56
PF07040	DUF1326	0.56
PF12973	Cupin_7	0.56
PF13185	GAF_2	0.56
PF13495	Phage_int_SAM_4	0.56
PF00300	His_Phos_1	0.56
PF00903	Glyoxalase	0.56
PF04030	ALO	0.56
PF14690	zf-ISL3	0.56
PF00196	GerE	0.56
PF13458	Peripla_BP_6	0.56
PF13847	Methyltransf_31	0.56
PF04299	FMN_bind_2	0.56
PF06736	TMEM175	0.56
PF12680	SnoaL_2	0.56
PF00144	Beta-lactamase	0.56
PF03060	NMO	0.56
PF04261	Dyp_perox	0.56
PF13302	Acetyltransf_3	0.56
PF04229	GrpB	0.56
PF13360	PQQ_2	0.56
PF05675	DUF817	0.56
PF03819	MazG	0.56
PF00749	tRNA-synt_1c	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.30
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	1.69
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	1.69
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.13
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.13
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.13
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.13
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.13
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.13
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	1.13
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.56
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.56
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.56
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.56
COG3739	Uncharacterized membrane protein YoaT, DUF817 family	Function unknown [S]	0.56
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.56
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.56
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.56
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.56
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.56
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.56
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.56
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
All Organisms	root	All Organisms	46.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
cellular organisms	root	All Organisms → cellular organisms	46.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.13 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.78 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.13 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.13 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.13 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.13 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.56 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.13 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.13 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.13 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.56 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	0.56 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.13 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	1.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.13 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.56 %
unclassified Caulobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae	0.56 %
Thermoanaerobacterales Family III. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis	0.56 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.78 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	1.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.13 %
Rhodanobacter glycinis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter glycinis	0.56 %
Aldersonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia	0.56 %
Caulobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium	0.56 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.56 %
Syntrophaceticus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Syntrophaceticus	0.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.78 %
Novosphingobium sp. Gsoil 351	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	1.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.13 %
unclassified Aldersonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia	0.56 %
Syntrophaceticus schinkii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Syntrophaceticus → Syntrophaceticus schinkii	0.56 %
Rhodanobacter glycinis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter glycinis	0.56 %
Caulobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium	0.56 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.78 %
Novosphingobium sp. Gsoil 351	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	1.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.13 %
Aldersonia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	0.56 %
Syntrophaceticus schinkii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Syntrophaceticus → Syntrophaceticus schinkii	0.56 %
Rhodanobacter glycinis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter glycinis	0.56 %
Caulobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium	0.56 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.56 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig541358	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300000956\|JGI10216J12902_103138513	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300002245\|JGIcombinedJ26739_101390781	Not Available	595	Open in IMG/M
3300004156\|Ga0062589_101776400	Not Available	618	Open in IMG/M
3300004463\|Ga0063356_100895560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300004463\|Ga0063356_103150442	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300004480\|Ga0062592_100257580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	1285	Open in IMG/M
3300004643\|Ga0062591_100700646	Not Available	916	Open in IMG/M
3300004643\|Ga0062591_101896628	Not Available	611	Open in IMG/M
3300004778\|Ga0062383_10503178	Not Available	607	Open in IMG/M
3300004782\|Ga0062382_10263876	Not Available	775	Open in IMG/M
3300005093\|Ga0062594_101903584	Not Available	631	Open in IMG/M
3300005172\|Ga0066683_10472793	Not Available	767	Open in IMG/M
3300005293\|Ga0065715_10167701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1573	Open in IMG/M
3300005331\|Ga0070670_101389961	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005336\|Ga0070680_101009149	Not Available	719	Open in IMG/M
3300005338\|Ga0068868_101728260	Not Available	590	Open in IMG/M
3300005339\|Ga0070660_100480928	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005354\|Ga0070675_102064358	Not Available	525	Open in IMG/M
3300005356\|Ga0070674_100162922	Not Available	1693	Open in IMG/M
3300005364\|Ga0070673_101859047	Not Available	571	Open in IMG/M
3300005365\|Ga0070688_100218950	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005459\|Ga0068867_100009322	All Organisms → cellular organisms → Bacteria	6926	Open in IMG/M
3300005467\|Ga0070706_101672442	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005468\|Ga0070707_101407210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium	664	Open in IMG/M
3300005471\|Ga0070698_100084876	All Organisms → cellular organisms → Bacteria → Proteobacteria	3154	Open in IMG/M
3300005539\|Ga0068853_100571693	Not Available	1072	Open in IMG/M
3300005543\|Ga0070672_101259887	Not Available	659	Open in IMG/M
3300005548\|Ga0070665_100347745	All Organisms → cellular organisms → Bacteria → Proteobacteria	1488	Open in IMG/M
3300005548\|Ga0070665_100491862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1238	Open in IMG/M
3300005564\|Ga0070664_100829639	Not Available	865	Open in IMG/M
3300005615\|Ga0070702_100888546	Not Available	696	Open in IMG/M
3300005616\|Ga0068852_102779840	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005617\|Ga0068859_101233995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	823	Open in IMG/M
3300005617\|Ga0068859_102336178	Not Available	589	Open in IMG/M
3300005618\|Ga0068864_101574857	Not Available	661	Open in IMG/M
3300005713\|Ga0066905_100268843	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300005718\|Ga0068866_11287029	Not Available	531	Open in IMG/M
3300005842\|Ga0068858_101069402	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300005842\|Ga0068858_101317664	Not Available	711	Open in IMG/M
3300005843\|Ga0068860_102568253	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006052\|Ga0075029_100069331	Not Available	2070	Open in IMG/M
3300006176\|Ga0070765_100618277	Not Available	1022	Open in IMG/M
3300006358\|Ga0068871_101654236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300006642\|Ga0075521_10639473	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300006844\|Ga0075428_102135633	Not Available	579	Open in IMG/M
3300006844\|Ga0075428_102462445	Not Available	533	Open in IMG/M
3300006845\|Ga0075421_101786419	Not Available	662	Open in IMG/M
3300006846\|Ga0075430_100679194	Not Available	849	Open in IMG/M
3300006846\|Ga0075430_100738388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacterales Family III. Incertae Sedis → Syntrophaceticus → Syntrophaceticus schinkii	812	Open in IMG/M
3300006847\|Ga0075431_100008738	All Organisms → cellular organisms → Bacteria → Proteobacteria	10149	Open in IMG/M
3300006881\|Ga0068865_100938014	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006881\|Ga0068865_101176503	Not Available	678	Open in IMG/M
3300006881\|Ga0068865_101486996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	607	Open in IMG/M
3300006918\|Ga0079216_10339577	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300009093\|Ga0105240_10921562	Not Available	939	Open in IMG/M
3300009093\|Ga0105240_12069500	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300009094\|Ga0111539_10520434	Not Available	1386	Open in IMG/M
3300009094\|Ga0111539_10711282	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300009094\|Ga0111539_11294736	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300009098\|Ga0105245_10522295	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1206	Open in IMG/M
3300009100\|Ga0075418_12837155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	529	Open in IMG/M
3300009148\|Ga0105243_10166968	All Organisms → cellular organisms → Bacteria → Acidobacteria	1903	Open in IMG/M
3300009148\|Ga0105243_12614792	Not Available	544	Open in IMG/M
3300009148\|Ga0105243_12878376	Not Available	522	Open in IMG/M
3300009156\|Ga0111538_11118519	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300009156\|Ga0111538_11464198	Not Available	861	Open in IMG/M
3300009176\|Ga0105242_12787402	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300009177\|Ga0105248_11960816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300009177\|Ga0105248_12431558	Not Available	597	Open in IMG/M
3300009551\|Ga0105238_10724144	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300009609\|Ga0105347_1385059	Not Available	601	Open in IMG/M
3300009807\|Ga0105061_1089858	Not Available	524	Open in IMG/M
3300010036\|Ga0126305_10419058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300010045\|Ga0126311_11373726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300010401\|Ga0134121_11639081	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010403\|Ga0134123_10280259	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300010403\|Ga0134123_11876165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300011119\|Ga0105246_10058138	All Organisms → cellular organisms → Bacteria	2678	Open in IMG/M
3300012202\|Ga0137363_10723670	Not Available	843	Open in IMG/M
3300012898\|Ga0157293_10244889	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012924\|Ga0137413_11360771	Not Available	572	Open in IMG/M
3300012955\|Ga0164298_10847031	Not Available	659	Open in IMG/M
3300012955\|Ga0164298_11207898	Not Available	573	Open in IMG/M
3300012957\|Ga0164303_11242155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012960\|Ga0164301_10994275	Not Available	659	Open in IMG/M
3300012971\|Ga0126369_12485921	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012986\|Ga0164304_10271185	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012987\|Ga0164307_10774825	Not Available	760	Open in IMG/M
3300012989\|Ga0164305_11802322	Not Available	553	Open in IMG/M
3300013297\|Ga0157378_12430002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter glycinis	576	Open in IMG/M
3300013308\|Ga0157375_13715824	Not Available	507	Open in IMG/M
3300014326\|Ga0157380_10002303	All Organisms → cellular organisms → Bacteria	12833	Open in IMG/M
3300014326\|Ga0157380_10537952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300014326\|Ga0157380_12435104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300015077\|Ga0173483_10779497	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300015200\|Ga0173480_10610037	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300018465\|Ga0190269_10953125	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300018476\|Ga0190274_11435939	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300018481\|Ga0190271_10405593	Not Available	1459	Open in IMG/M
3300019377\|Ga0190264_10642617	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300020195\|Ga0163150_10276197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300020581\|Ga0210399_10698258	Not Available	834	Open in IMG/M
3300022756\|Ga0222622_10463762	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300025893\|Ga0207682_10367519	Not Available	678	Open in IMG/M
3300025899\|Ga0207642_10298400	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300025899\|Ga0207642_11156511	Not Available	501	Open in IMG/M
3300025918\|Ga0207662_10506962	Not Available	831	Open in IMG/M
3300025925\|Ga0207650_11003859	Not Available	710	Open in IMG/M
3300025925\|Ga0207650_11018483	Not Available	704	Open in IMG/M
3300025926\|Ga0207659_11583731	Not Available	559	Open in IMG/M
3300025937\|Ga0207669_10025415	All Organisms → cellular organisms → Bacteria	3201	Open in IMG/M
3300025937\|Ga0207669_11796547	Not Available	524	Open in IMG/M
3300025940\|Ga0207691_11521909	Not Available	546	Open in IMG/M
3300025941\|Ga0207711_10136050	All Organisms → cellular organisms → Bacteria → Acidobacteria	2207	Open in IMG/M
3300025961\|Ga0207712_11356356	Not Available	636	Open in IMG/M
3300026023\|Ga0207677_11715764	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300026023\|Ga0207677_12100713	Not Available	525	Open in IMG/M
3300026095\|Ga0207676_11533915	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300026121\|Ga0207683_11322373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300026557\|Ga0179587_11101820	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300027869\|Ga0209579_10135348	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300027907\|Ga0207428_10632721	Not Available	769	Open in IMG/M
3300027909\|Ga0209382_11025976	Not Available	858	Open in IMG/M
3300027909\|Ga0209382_12339388	Not Available	501	Open in IMG/M
3300028379\|Ga0268266_11265441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300028380\|Ga0268265_10667442	Not Available	1001	Open in IMG/M
3300028380\|Ga0268265_11878289	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300028381\|Ga0268264_11212685	Not Available	764	Open in IMG/M
3300028587\|Ga0247828_10095842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1395	Open in IMG/M
3300028812\|Ga0247825_10662756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300031231\|Ga0170824_105099121	Not Available	509	Open in IMG/M
3300031231\|Ga0170824_121655373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300031548\|Ga0307408_101130283	Not Available	728	Open in IMG/M
3300031731\|Ga0307405_11847755	Not Available	538	Open in IMG/M
3300031740\|Ga0307468_100058227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2068	Open in IMG/M
3300031854\|Ga0310904_10011264	All Organisms → cellular organisms → Bacteria	3637	Open in IMG/M
3300031858\|Ga0310892_10268620	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300031908\|Ga0310900_10478027	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300031908\|Ga0310900_10577142	Not Available	885	Open in IMG/M
3300031913\|Ga0310891_10035039	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300032013\|Ga0310906_10825475	Not Available	656	Open in IMG/M
3300032017\|Ga0310899_10065932	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300032075\|Ga0310890_11814148	Not Available	507	Open in IMG/M
3300032091\|Ga0318577_10153591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	1096	Open in IMG/M
3300032211\|Ga0310896_10094778	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300033412\|Ga0310810_10294904	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300033475\|Ga0310811_11444146	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300033550\|Ga0247829_10350870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1206	Open in IMG/M
3300033551\|Ga0247830_10712040	Not Available	797	Open in IMG/M
3300034668\|Ga0314793_033564	Not Available	874	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.85%
Environmental	Environmental	48.59%
Engineered	Engineered	0.56%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.85%
Terrestrial	Environmental → Terrestrial	45.20%
Aquatic	Environmental → Aquatic	3.39%
Solid Waste	Engineered → Solid Waste	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.95%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Sediment	Environmental → Aquatic → Sediment	1.69%
Roots	Host-Associated → Plants → Roots	1.13%
Floodplain	Environmental → Terrestrial → Floodplain	0.56%
Grass	Engineered → Solid Waste → Grass	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.30%
Loam	Environmental → Terrestrial → Soil → Loam	8.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.13%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.13%
Lake	Environmental → Aquatic → Freshwater → Lake	0.56%
Sand	Environmental → Terrestrial → Soil → Sand	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.56%
Composting	Engineered → Solid Waste → Grass → Composting	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.30%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.13%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.13%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.13%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.13%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.56%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.56%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_04650400	2124908045	Soil	LKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
4MG_04944890	2170459019	Switchgrass, Maize And Mischanthus Litter	RGEAGEGTVVAARCSPSNQITQYWIQKPNGGRFWATLQELKPL
JGI10216J12902_1031385132	3300000956	Soil	VYELTDKGIFSLTSLLLPGSPTSSNPPDCFTLKVDAKVLGESGEGVVVGARCSPSNRITQYWVQKANGDRFWASLQELKIR*
JGIcombinedJ26739_1013907811	3300002245	Forest Soil	PQDCFALKVNAKVGGEAGEGIVVGARCSPSNKITQYWIQKTSGERFWATFQELKTR*
Ga0062589_1017764001	3300004156	Soil	IYELTDKGVFSLTSLLLPGDAVSSYPPKCFALRINARVSGVLGKGRVVGARCSPTNQITEYWVQKSNGQRFWATFQQLRQL*
Ga0063356_1008955601	3300004463	Arabidopsis Thaliana Rhizosphere	LVDPVYELTDRGALLLTSLLQPGRPTSLSPQDCFALRIGAQVRGDNGEGTVVRARCSPANQLTQYRVRKPNGERFWATREQLKPL*
Ga0063356_1031504421	3300004463	Arabidopsis Thaliana Rhizosphere	VVEPVYELTDKGVFSLTSLLLPGRPTSSSPPDCFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWIQKPNGERFWATLQQLKKR*
Ga0062592_1002575801	3300004480	Soil	DCFVLKVNDKVRGDAGEGSVIRARCSPSNKLTQYWVQKPNGDRFWATLQQLQKR*
Ga0062591_1007006462	3300004643	Soil	NDKVRGDAGEGSVVGARCSPSNRITQYWVQKPNGERFWATLQQLQKR*
Ga0062591_1018966282	3300004643	Soil	VNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0062591_1026962501	3300004643	Soil	VRGDAGEGSVVAARCSPSNKITQYWVQKPNGERFWATLEQLQRR*
Ga0062383_105031781	3300004778	Wetland Sediment	LLPGRPTSSSPPDCFALKMNAKVRGELGEGLVVGARCSPSNQITQYWVHKSNGERFWATRQELKAQ*
Ga0062382_102638762	3300004782	Wetland Sediment	VNDQVLGDAGEGRVVGARCSPSNKITQYWIQKLNGERFWATLQQLKKH*
Ga0062594_1019035841	3300005093	Soil	SSSPPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPSGERFWATLQQLKRR*
Ga0066683_104727932	3300005172	Soil	GVFLLTSLLQPGSPTQSSPPDCFVLKIGTRVHGDAGEGTVVGTRCSPANQLTQYWVRKPNGERFWATAQELKPM*
Ga0065715_101677011	3300005293	Miscanthus Rhizosphere	GIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWIQNANGERFWASLQELKNR*
Ga0065707_104363811	3300005295	Switchgrass Rhizosphere	EAGEGLVVGARCSPSNQITQYWVQKSNGERFWTTFQELKPR*
Ga0070670_1013899611	3300005331	Switchgrass Rhizosphere	FSLISLLLPGRPTSSSPPDCFALKVNDKVRGDAGEGSVVGTRCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0066388_1019741941	3300005332	Tropical Forest Soil	LLQPGRPTQSTPPDCFVLQIGTHVRSDAGEGTVVGARCSPANQLTQYWVRKANGERFWATAQNVKPI*
Ga0070680_1010091491	3300005336	Corn Rhizosphere	TDLLRIFSLTSLLLPGSPTSSNPPDCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0068868_1017282601	3300005338	Miscanthus Rhizosphere	VYELTDKGIFSLTSLLLPGSPTSSNPKDCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQEANGERFWASLQELKIR*
Ga0070660_1004809282	3300005339	Corn Rhizosphere	STVVEPVYELTDEGVFSLTSLLLPGRPTSSSPPDCFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0070675_1020643581	3300005354	Miscanthus Rhizosphere	SSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0070674_1001629223	3300005356	Miscanthus Rhizosphere	LLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0070673_1018590471	3300005364	Switchgrass Rhizosphere	LTSLLMPGRPTSSSPPDCFTLKMNAKVRGEGGEGLVVGARCSPSNQITQYWIQKSNGERFWATFQELKAR*
Ga0070688_1002189501	3300005365	Switchgrass Rhizosphere	YELTDQGVFSLTSLLLPGRPTSSSPPDCFTLKVNDKVQGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0068867_10000932211	3300005459	Miscanthus Rhizosphere	DKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068867_1013891922	3300005459	Miscanthus Rhizosphere	AKVRGEAGEGIVVGARCSPSNQIIQYWVQKANSERFWASFQELKTR*
Ga0070706_1016724421	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DKGIFSLTSLLLPGSPTSSNPPDCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQKANGARFWASFQELKTR*
Ga0070707_1009555241	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GDAGEGSVVGARCSPSNKITQYWVQEPNGERFWATLQQLQQR*
Ga0070707_1014072101	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LLLTSLLQPGSPTQSSPPDCFVLKIGARVHGDAGEGTVVGARCSPANQLTQYWVRKPNGERFWATSQELKPM*
Ga0070698_1000848761	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0068853_1005716931	3300005539	Corn Rhizosphere	NEKGIFSLTSLLLPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0070672_1012598871	3300005543	Miscanthus Rhizosphere	KGIFSLTSLLLPGRPTSSSPPDCFALKVHAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0070665_1003477451	3300005548	Switchgrass Rhizosphere	FSLTSLLLPGRPTSSNPPDCFTLKVNAKVLGDLGEGVVVGARCSPSNQITQYWVQKSTGERFWASLQELKSR*
Ga0070665_1004918621	3300005548	Switchgrass Rhizosphere	TDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0070664_1008296392	3300005564	Corn Rhizosphere	LKVNDKVHGDAGEGTVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0070702_1008885462	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068852_1027798401	3300005616	Corn Rhizosphere	CFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNAERFWATLQELQAQ*
Ga0068859_1012339951	3300005617	Switchgrass Rhizosphere	ELTDKGIFSLTSLLLPGRPTSSNPPDCFMLKVDAKVRGEAGDGIVVGARCSPSNQITQYWVQKANGERFWAGLQELKTR*
Ga0068859_1023361782	3300005617	Switchgrass Rhizosphere	PVYELTDKGIFSLTSLLLPGRPTSSNPPDCFALKVTAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068864_1015748571	3300005618	Switchgrass Rhizosphere	DCFVLKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0066905_1002688431	3300005713	Tropical Forest Soil	SGAVVDPVYELTDKGVLLLNSLVQPGSPTPSSPPDCFALEIGARVYGDAGKGTVIGARCSPANQFTQYWVQKANGERFWATLQELEPM*
Ga0068866_112870292	3300005718	Miscanthus Rhizosphere	YELTDKGVFLLTSLLLPGSSTSTSPPGCFALRVDAKVRGEAGEGIVVGARCSPSNQIIQYWVQKANSERFWASFQELKTR*
Ga0068858_1010694021	3300005842	Switchgrass Rhizosphere	LQPGSPTSSSPADCFALKVNAKVRGEAGEGIVVGARCSPSNQIIQYWVQKANSERFWASFQELKTR*
Ga0068858_1013176642	3300005842	Switchgrass Rhizosphere	LLPGRPTSSSPPDCFALKINAKVRGEPGEGLVIGARCSPSNQITQYWVQKSNGERFWATLQELKVL*
Ga0068860_1025682532	3300005843	Switchgrass Rhizosphere	LPGSPTSSTPADCFALKVHAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0075029_1000693312	3300006052	Watersheds	PTSSSPPDCFTLKVHAKVRGESGEGIVVGARCSPSNRITQYWVQKANGERFWATLQELKTR*
Ga0070765_1006182771	3300006176	Soil	PGTPTSSSPPECFALKVNAKVGGESGEGIVVGARCSPSNKITQYWVQKASGERFWATFQELKIR*
Ga0068871_1016542361	3300006358	Miscanthus Rhizosphere	LKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR*
Ga0075521_106394732	3300006642	Arctic Peat Soil	SSPADCFALKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0075428_1021356332	3300006844	Populus Rhizosphere	NEKGIFSLTSLLLPGRPTSSSPPDCFALKINAKVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0075428_1024624452	3300006844	Populus Rhizosphere	PTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0075421_1017864192	3300006845	Populus Rhizosphere	TSSSPPDCFALKVTDEVLGDAGEGRVVAARCSPSNQITQYWIQKPNGDRFWASLQQLKRR
Ga0075430_1006791941	3300006846	Populus Rhizosphere	PGRPTSSSPPDCFALKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATIQELKAR*
Ga0075430_1007383881	3300006846	Populus Rhizosphere	TIVEPVYELTDKGIFSLTSLLLPGRPTSSTPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0075431_1000087389	3300006847	Populus Rhizosphere	TDRAALLLTSLLQPGRPTSSSPQDCFALRIGAQVRGDNGEGTVVGARCSPANQLTQYWVRKPNGERLWATREQLKPL*
Ga0068865_1009380142	3300006881	Miscanthus Rhizosphere	NAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0068865_1011765032	3300006881	Miscanthus Rhizosphere	SPPDCFALKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKAR*
Ga0068865_1014869962	3300006881	Miscanthus Rhizosphere	SPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTQ*
Ga0079216_103395771	3300006918	Agricultural Soil	TLVDPVFELTDKGVSMLTSLLQPGSPTSSSPSDCFAFRIGARVQADEGEGTVVGARCSPGNGLTQYWVGKSNGERFWATREQLKAF*
Ga0105240_109215621	3300009093	Corn Rhizosphere	EKGIFSLTSLLLPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSSGERFWATLQELQAQ*
Ga0105240_120695002	3300009093	Corn Rhizosphere	VNAKVRGEAGGGIVVGAPCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0111539_105204343	3300009094	Populus Rhizosphere	FSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQRANSERVWASLQELKIR*
Ga0111539_107112822	3300009094	Populus Rhizosphere	FSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQRANSERFWASLQELKIR*
Ga0111539_112947361	3300009094	Populus Rhizosphere	SLTSLLLPGSPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0105245_105222952	3300009098	Miscanthus Rhizosphere	SSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0075418_128371551	3300009100	Populus Rhizosphere	GVPTSSSPPDCFALKVNDQVLGDAGEGRVVGARCSPSNQITQYWIQKPNGERFWATLQQLKRR*
Ga0105243_101669681	3300009148	Miscanthus Rhizosphere	CFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0105243_126147921	3300009148	Miscanthus Rhizosphere	TSNPPDCFTLKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASLQELKTR*
Ga0105243_128783761	3300009148	Miscanthus Rhizosphere	LKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKAR*
Ga0111538_109481591	3300009156	Populus Rhizosphere	AKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0111538_111185192	3300009156	Populus Rhizosphere	LLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0111538_114641982	3300009156	Populus Rhizosphere	LLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGGRCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0105242_127874022	3300009176	Miscanthus Rhizosphere	ALKVNAKVLGEFGEGVVVGARCSPSNQVTQYWVQKANGERFWASLQELKNR*
Ga0105248_119608161	3300009177	Switchgrass Rhizosphere	TSSSPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR
Ga0105248_124315581	3300009177	Switchgrass Rhizosphere	VEPVYELNEKGIFSLTSILLPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0105238_107241441	3300009551	Corn Rhizosphere	TSLLLPGRPTSSNPPDCFALKVDAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0105249_112524222	3300009553	Switchgrass Rhizosphere	VLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0105347_13850591	3300009609	Soil	LLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASMQELKIR*
Ga0105061_10898581	3300009807	Groundwater Sand	PPDCFALKVNAKVRGGAGEGIVVGARCSPSNQITQYWVQKANGERFWAGVQELKTR*
Ga0126305_104190582	3300010036	Serpentine Soil	SLTSLLLPGSPTSSDPPDCFALKVNAKVLGEFGEGVVVGARCSPSNAITQYWVQKANGERFWASLQELKSR*
Ga0126311_113737261	3300010045	Serpentine Soil	VYELTDKGVFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKADSERFWASLQELKIR*
Ga0134121_116390811	3300010401	Terrestrial Soil	KGIFSLTSLLLPGRPTSSSPPDCFALKIHARVRGELGEGLVVGARCSPTNQITQYWVQKSNGERFWATLQELKAQ*
Ga0134123_102802591	3300010403	Terrestrial Soil	NDQVRGDAGEGRVVGARCSPSNQITQYWIQKPNGERFWAALPQLKKR*
Ga0134123_118761652	3300010403	Terrestrial Soil	FSLTSLLLPGRATSSSPPDCFVLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR*
Ga0105246_100581381	3300011119	Miscanthus Rhizosphere	PVYELNGKGIFLLTSLLLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0137363_107236701	3300012202	Vadose Zone Soil	EKGVFVLTSLLQAGTPTTSGPPDCFALKIGAQVHGDRGEGVVIGARCSPSNHITQYWVREPGGDRFWATLPELKQ*
Ga0157293_102448891	3300012898	Soil	PSRWVKRSKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0137413_113607711	3300012924	Vadose Zone Soil	SSSPPNCFVLKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0164298_108470312	3300012955	Soil	LPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCPPSNQITQCWVQKANGERFWASFQELKTR*
Ga0164298_112078981	3300012955	Soil	NAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGQRFWASFQELKTR*
Ga0164303_112421551	3300012957	Soil	VYELTDKGIFSLKSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKADGERFWASLQELKNR*
Ga0164301_109942751	3300012960	Soil	TIVEPVYELTDQGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGMVVGARCSPSNQITQYWVQKANGERFWASLQELKIR*
Ga0126369_124859212	3300012971	Tropical Forest Soil	GTRVHSDAGEGTVVGARCSPANQLTQYWVRRPNGERFWATAQELKPT*
Ga0164304_102711851	3300012986	Soil	VLTSLLQPGTPISSSPADCFALKVGAHVRGERGEGTVVGARCSPANQITEYWVRKSDDKRFWATRQELKAE*
Ga0164307_107748252	3300012987	Soil	TSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLPELKIR
Ga0164305_118023221	3300012989	Soil	VNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0157307_11815672	3300013096	Soil	GIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0157378_124300022	3300013297	Miscanthus Rhizosphere	NPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR*
Ga0163162_117975341	3300013306	Switchgrass Rhizosphere	LVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0157375_137158241	3300013308	Miscanthus Rhizosphere	FSLTSLLSPGRPTSSSPPDCFALKINARVRGELGEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ*
Ga0163163_105823591	3300014325	Switchgrass Rhizosphere	IVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0157380_1000230316	3300014326	Switchgrass Rhizosphere	SNPPDCFALKVHAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR*
Ga0157380_105379523	3300014326	Switchgrass Rhizosphere	SNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQVTQYWVQKANGERFWASLQELKNR*
Ga0157380_124351041	3300014326	Switchgrass Rhizosphere	LLLPGRATSSSPPDCFVLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR*
Ga0173483_107794972	3300015077	Soil	KVDAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR*
Ga0173480_106100373	3300015200	Soil	FALKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR*
Ga0190269_109531252	3300018465	Soil	LKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKRR
Ga0190274_114359392	3300018476	Soil	PDCFALKVNDKVHGDAGEGSVVGARCSPSNQITQYWVQKPNGERFWATLQQLQKR
Ga0190274_134494931	3300018476	Soil	DVGEGIVVGARCSPSNQITQYWVQEADGERFWASVQELKTR
Ga0190271_104055931	3300018481	Soil	TVVEPVYELTDEGMFSLTSLLLPGRATSSSPPDCFVLKVNDKVRGADGEGIVVSARCSPSNKITQYWVQKPNGERFWATLQQLQKR
Ga0190264_106426171	3300019377	Soil	PDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKKR
Ga0163150_102761972	3300020195	Freshwater Microbial Mat	VYELTDKGVFSLTSLLLPGRPTSSSPLDCFSLRINAKVRGDAGEGTIVGARCSPTNQVTQYWVQRPNGERFWAMLQELKPL
Ga0210399_106982582	3300020581	Soil	SSPPDCFTLKVHAKVRGESGEGIVVGARCSPSNRITQYWVQKANGERFWATLQELKTR
Ga0222622_104637623	3300022756	Groundwater Sediment	SSPPDCFALKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207682_103675191	3300025893	Miscanthus Rhizosphere	EPVYELTDKGVFLLTSLLLPGRPTSSSPPDCFVLKVNDKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207642_102984001	3300025899	Miscanthus Rhizosphere	SSNPPDCFALKANAKVLGEFGEGVVVGARCSPSNQVTQYWVQKANGERFWASLQELKNR
Ga0207642_111565112	3300025899	Miscanthus Rhizosphere	VYELTDKGIFSLTSLLLPGRPISSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207680_106374141	3300025903	Switchgrass Rhizosphere	VRGGAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207645_108737171	3300025907	Miscanthus Rhizosphere	KVLGEFGEGVVVGARCSPSNQITQYWVRKANGERFWASLQELKNR
Ga0207662_105069621	3300025918	Switchgrass Rhizosphere	DKVRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207646_116571972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	INAEVRGEAGEGTVVGARCSPSNQITQYWIQKPNGGRFWATLQELKPL
Ga0207650_110038591	3300025925	Switchgrass Rhizosphere	LLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWAGLQELKHDNGASRLIGFSTLTL
Ga0207650_110184832	3300025925	Switchgrass Rhizosphere	TDQGVFSLTSLLLPGRPTSSSPPDCFTLKVNDKVQGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207659_115837311	3300025926	Miscanthus Rhizosphere	STVVDSVYELTDKGVFSLTSLLAPGRPISSSPPNCFSLRINAKVRGDLGEGLVVGARCSPANQITEYWVQKKNGQRFWATLQQLRQL
Ga0207670_103040522	3300025936	Switchgrass Rhizosphere	VRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELNTR
Ga0207669_100254153	3300025937	Miscanthus Rhizosphere	FSLTSLLLPGRPTSSNPPDCFALKVHAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207669_117965471	3300025937	Miscanthus Rhizosphere	VPDCFVLKVNDKVRGDAGEGSVVGARCSPSNKITQYWVQKPNGERFWATLQQLQKR
Ga0207691_115219091	3300025940	Miscanthus Rhizosphere	KGIFSLTSLLLPGSPTSSNPPDCFALKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207711_101360503	3300025941	Switchgrass Rhizosphere	KVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207689_109100321	3300025942	Miscanthus Rhizosphere	GEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKVR
Ga0207712_113563561	3300025961	Switchgrass Rhizosphere	SSNPPDCFALKVNAKVLGEFGDGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR
Ga0207668_115220022	3300025972	Switchgrass Rhizosphere	LGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207677_117157642	3300026023	Miscanthus Rhizosphere	EPVYELTDKGTFLLTSLLLPGSPTSSTPADCFALKVHAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207677_121007131	3300026023	Miscanthus Rhizosphere	VYELTDKGIFSLTSLLLPGSPTSSNPKDCFALKVNAKVRSEAGEGIVVGARCSPSNQITQYWVQEANGERFWASLQELKIR
Ga0207708_107076831	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0207676_115339152	3300026095	Switchgrass Rhizosphere	ADCFALKVHAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0207676_116905461	3300026095	Switchgrass Rhizosphere	VRGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0207683_113223732	3300026121	Miscanthus Rhizosphere	SLLLPGSPTSSNPPDCFALKVNAKVRGEAGEGIVVGARCSPSNQITQYWVQEANGERFWASIQELKTQ
Ga0179587_111018201	3300026557	Vadose Zone Soil	LTSLLLPGRPTLSSPPDCFALKINAKVRGDAGEGLVVGARCSPSNQITQYWVQKSNGDRFWATSQELKTR
Ga0209579_101353481	3300027869	Surface Soil	TSLLLPGTPTSSSPSDCFALKVNAKVHGKSGEGIIVGARCSPSNKITQYWVQKANGERFWATFQELKVR
Ga0207428_106327212	3300027907	Populus Rhizosphere	LTDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGLVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0209382_110259761	3300027909	Populus Rhizosphere	LLLPGVPTSSSPPDCFALKVTDEVLGDAGEGRVVAARCSPSNQITQYWIQKPNGDRFWASLQQLKRR
Ga0209382_123393881	3300027909	Populus Rhizosphere	LLLPGRPTSSSPPDCFALKINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATIQELKAR
Ga0268266_112654411	3300028379	Switchgrass Rhizosphere	SNPPDCFTLKVNAKVLGDLGEGVVVGARCSPSNQITQYWVQKSTGERFWASLQELKSR
Ga0268265_106674422	3300028380	Switchgrass Rhizosphere	FSLTSLLLPGRPTSSSPPDCFTLKVNDKVHGDAGEGSVVGARCSPSNQITQYWVQESNGERFWATLQQLKKR
Ga0268265_118782892	3300028380	Switchgrass Rhizosphere	LTSLLLPGSPTSSSPADCFALKVNTKVRGDAGEGIVVGARCSPSNQITQYWVHKANGERFWASLQELKTR
Ga0268264_112126852	3300028381	Switchgrass Rhizosphere	TSLLMPGIPTSSSSPDCFALKMSAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFQELKAR
Ga0247828_100958422	3300028587	Soil	LTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0247825_106627562	3300028812	Soil	PPDCFTLKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGDRFWASLQELKIR
Ga0170824_1050991212	3300031231	Forest Soil	KINAKVRGEAGEGLVVGARCSPSNQITQYWVQKSNGERFWATFKELKAR
Ga0170824_1216553732	3300031231	Forest Soil	VLTSLLQPGTPTSSNPPDCFALKVGAAVRSDRGEGTVIGARCSPANQITEYWVKKSNDERFWATLQELKVQ
Ga0307408_1011302831	3300031548	Rhizosphere	VYELTDKGMFLLTSLLLPGSPTSSSPADCFALKVNAKVRGEAGGGIVVGARCSPANQITQYWVQKANGERFWASFQELKTR
Ga0307405_118477552	3300031731	Rhizosphere	LGVFSLTSLLLPGAPTSSSPPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKRR
Ga0307468_1000582273	3300031740	Hardwood Forest Soil	SSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0310907_105724431	3300031847	Soil	EFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310904_100112641	3300031854	Soil	DCFALKVHAKVLGEFGEGVVVGARCSPANQITQYWVQKANSERFWASLQELKIR
Ga0310892_102686201	3300031858	Soil	ELTDEGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWIQNANGERFWASLQELKNR
Ga0310893_105159271	3300031892	Soil	LGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0310900_104780272	3300031908	Soil	LTSLLLPGSRTSSPADCFALKVNAKVRGEAGGGIVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0310900_105771423	3300031908	Soil	SLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGGRCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310891_100350391	3300031913	Soil	IFSLTSLLLPGRPTSSNPPDCFALKVNAKVQGESGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0310885_106900511	3300031943	Soil	EGVVVGARCSPSNQITQYWVQKADGERFWASLQELKNR
Ga0307416_1020543912	3300032002	Rhizosphere	VLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0310906_108254752	3300032013	Soil	PPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310899_100659321	3300032017	Soil	IFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQQANGERFWASLQELKNR
Ga0310890_103262622	3300032075	Soil	GEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR
Ga0310890_118141481	3300032075	Soil	RGVFSLTSLLLPGAPTSSSPPDCFALKVNDQVLGEAGDGRVVGARCSPSNKITQYWIQQPNGERFWATLQQLKRR
Ga0318577_101535911	3300032091	Soil	VYELTEKGVFVLTSLLQPGSPTQSSPPDCFVLKIGTRVHGDAGEGTVVGARCSPANQFTQYWIRKPNGERFWATSQELKRM
Ga0310896_100947782	3300032211	Soil	PVYELTDEGVFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWGSLQELKIR
Ga0310810_102949043	3300033412	Soil	LDCFALKVNAKVLGDFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKNR
Ga0310811_114441461	3300033475	Soil	LTDKGNFLLTSLLLPGRPTSSNPPDCFALKVDAKVRGEAGGGVVVGARCSPSNQITQYWVQKANGERFWASFQELKTR
Ga0247829_103508702	3300033550	Soil	LLPGSPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0247830_107120401	3300033551	Soil	PPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANGERFWASLQELKIR
Ga0364945_0033026_1203_1337	3300034115	Sediment	VRGELDEGLVVGARCSPSNQITQYWVQKSNGERFWATLQELQAQ
Ga0314793_033564_639_872	3300034668	Soil	TDKGIFSLTSLLLPGRPTSSNPPDCFALKVNAKVLGEFGEGVVVGARCSPSNQITQYWVQKANSERFWASLQELKIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences