Metagenome / Metatranscriptome Family F033449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033449
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	62 residues
Representative Sequence	VWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS
Number of Associated Samples	116
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.43 %
% of genes near scaffold ends (potentially truncated)	35.03 %
% of genes from short scaffolds (< 2000 bps)	87.01 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.006 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil (8.475 % of family members)
Environment Ontology (ENVO)	Unclassified (37.288 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.763 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.61% β-sheet: 0.00% Coil/Unstructured: 67.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF01578	Cytochrom_C_asm	50.85
PF14012	DUF4229	31.07
PF05140	ResB	3.39
PF01040	UbiA	2.82
PF13378	MR_MLE_C	1.13
PF00300	His_Phos_1	0.56
PF00490	ALAD	0.56
PF00583	Acetyltransf_1	0.56
PF00579	tRNA-synt_1b	0.56
PF12832	MFS_1_like	0.56
PF02776	TPP_enzyme_N	0.56
PF03900	Porphobil_deamC	0.56
PF00196	GerE	0.56
PF00501	AMP-binding	0.56
PF01553	Acyltransferase	0.56
PF02683	DsbD	0.56
PF01522	Polysacc_deac_1	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG1333	Cytochrome c biogenesis protein ResB	Posttranslational modification, protein turnover, chaperones [O]	3.39
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.56
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.56
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.56
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	0.56
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.01 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.01 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.01 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.44 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	86.44 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.44 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	70.62 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	70.06 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	63.84 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	11.30 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	6.21 %
Nocardioides hwasunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides hwasunensis	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	11.30 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	3.95 %
Nocardioides sp. JS614	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	2.26 %
Nocardioides hwasunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides hwasunensis	1.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02HNPBN	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	664	Open in IMG/M
3300001213\|JGIcombinedJ13530_101906368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	699	Open in IMG/M
3300001536\|A1565W1_10465434	Not Available	2217	Open in IMG/M
3300001686\|C688J18823_10871308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	571	Open in IMG/M
3300001978\|JGI24747J21853_1021734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	702	Open in IMG/M
3300002568\|C688J35102_118841206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	603	Open in IMG/M
3300002568\|C688J35102_119312271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	672	Open in IMG/M
3300002568\|C688J35102_119703530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	753	Open in IMG/M
3300002568\|C688J35102_119890563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	805	Open in IMG/M
3300002568\|C688J35102_120787563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1580	Open in IMG/M
3300002568\|C688J35102_120847772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1803	Open in IMG/M
3300002568\|C688J35102_120848607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1807	Open in IMG/M
3300002568\|C688J35102_120870752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1924	Open in IMG/M
3300002568\|C688J35102_120877434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1966	Open in IMG/M
3300003320\|rootH2_10068492	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300003324\|soilH2_10172828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1135	Open in IMG/M
3300003324\|soilH2_10377125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1055	Open in IMG/M
3300004081\|Ga0063454_100598247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	805	Open in IMG/M
3300004081\|Ga0063454_100664129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	777	Open in IMG/M
3300004081\|Ga0063454_100681941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	770	Open in IMG/M
3300004114\|Ga0062593_102155991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300004153\|Ga0063455_100599481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	716	Open in IMG/M
3300004153\|Ga0063455_101701605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300004157\|Ga0062590_100841737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	850	Open in IMG/M
3300004479\|Ga0062595_100150975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1352	Open in IMG/M
3300004479\|Ga0062595_100755944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300004479\|Ga0062595_101453921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300004643\|Ga0062591_102954010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	504	Open in IMG/M
3300005093\|Ga0062594_100063392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	1984	Open in IMG/M
3300005093\|Ga0062594_100990672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	807	Open in IMG/M
3300005093\|Ga0062594_102113453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	606	Open in IMG/M
3300005159\|Ga0066808_1038960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300005168\|Ga0066809_10234459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	507	Open in IMG/M
3300005327\|Ga0070658_10012041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	6947	Open in IMG/M
3300005327\|Ga0070658_10669346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	901	Open in IMG/M
3300005329\|Ga0070683_100012387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	7411	Open in IMG/M
3300005329\|Ga0070683_101817187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	586	Open in IMG/M
3300005332\|Ga0066388_101785745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1093	Open in IMG/M
3300005332\|Ga0066388_106912844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	571	Open in IMG/M
3300005337\|Ga0070682_100145213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1622	Open in IMG/M
3300005456\|Ga0070678_101862272	Not Available	568	Open in IMG/M
3300005456\|Ga0070678_101901417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300005466\|Ga0070685_10278423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300005526\|Ga0073909_10448445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300005530\|Ga0070679_100816300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	876	Open in IMG/M
3300005530\|Ga0070679_100821005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	873	Open in IMG/M
3300005535\|Ga0070684_100053908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	3502	Open in IMG/M
3300005535\|Ga0070684_101379343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300005535\|Ga0070684_102119113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300005548\|Ga0070665_100000516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	55112	Open in IMG/M
3300005548\|Ga0070665_101779422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	623	Open in IMG/M
3300005563\|Ga0068855_100854943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	964	Open in IMG/M
3300005564\|Ga0070664_100408796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1242	Open in IMG/M
3300005616\|Ga0068852_100670283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1046	Open in IMG/M
3300005618\|Ga0068864_101564094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	663	Open in IMG/M
3300005764\|Ga0066903_100441951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2167	Open in IMG/M
3300005764\|Ga0066903_104074477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	783	Open in IMG/M
3300006046\|Ga0066652_101216381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	713	Open in IMG/M
3300006358\|Ga0068871_100552761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	1043	Open in IMG/M
3300006358\|Ga0068871_100853295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	842	Open in IMG/M
3300006576\|Ga0074047_11942050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	2572	Open in IMG/M
3300006576\|Ga0074047_11974928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	853	Open in IMG/M
3300006580\|Ga0074049_13113764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	604	Open in IMG/M
3300006604\|Ga0074060_11773476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1037	Open in IMG/M
3300006606\|Ga0074062_12795052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	752	Open in IMG/M
3300006804\|Ga0079221_10608147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739	Open in IMG/M
3300006953\|Ga0074063_13888282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	915	Open in IMG/M
3300009098\|Ga0105245_10001045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	25060	Open in IMG/M
3300009098\|Ga0105245_11238668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	794	Open in IMG/M
3300009098\|Ga0105245_12190294	Not Available	606	Open in IMG/M
3300009098\|Ga0105245_12412855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300009101\|Ga0105247_10507307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	880	Open in IMG/M
3300009101\|Ga0105247_10707206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	759	Open in IMG/M
3300009176\|Ga0105242_10521227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300009840\|Ga0126313_10849971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides hwasunensis	744	Open in IMG/M
3300009870\|Ga0131092_10021995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	9984	Open in IMG/M
3300010040\|Ga0126308_10555111	Not Available	780	Open in IMG/M
3300010040\|Ga0126308_11311631	Not Available	514	Open in IMG/M
3300010041\|Ga0126312_10907066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides hwasunensis	642	Open in IMG/M
3300010043\|Ga0126380_11402612	Not Available	614	Open in IMG/M
3300010044\|Ga0126310_10018802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3416	Open in IMG/M
3300010166\|Ga0126306_11301860	Not Available	599	Open in IMG/M
3300010360\|Ga0126372_11215195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides hwasunensis	779	Open in IMG/M
3300010362\|Ga0126377_11200735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	829	Open in IMG/M
3300010362\|Ga0126377_12505085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	592	Open in IMG/M
3300011119\|Ga0105246_11013628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	752	Open in IMG/M
3300012011\|Ga0120152_1077087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	993	Open in IMG/M
3300012212\|Ga0150985_107411618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	636	Open in IMG/M
3300012212\|Ga0150985_114307542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	907	Open in IMG/M
3300012212\|Ga0150985_116725304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1099	Open in IMG/M
3300012212\|Ga0150985_117687371	Not Available	697	Open in IMG/M
3300012406\|Ga0134053_1114789	Not Available	554	Open in IMG/M
3300012469\|Ga0150984_107971015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1375	Open in IMG/M
3300012469\|Ga0150984_121756940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	599	Open in IMG/M
3300012469\|Ga0150984_121879385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	528	Open in IMG/M
3300012943\|Ga0164241_10005906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	11289	Open in IMG/M
3300012943\|Ga0164241_10057064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2849	Open in IMG/M
3300012957\|Ga0164303_10614589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	718	Open in IMG/M
3300012958\|Ga0164299_10533142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	788	Open in IMG/M
3300012971\|Ga0126369_12660872	Not Available	584	Open in IMG/M
3300012989\|Ga0164305_10211968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1371	Open in IMG/M
3300012989\|Ga0164305_10428838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300013102\|Ga0157371_11035914	Not Available	627	Open in IMG/M
3300013105\|Ga0157369_10992362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	860	Open in IMG/M
3300013296\|Ga0157374_11458658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	707	Open in IMG/M
3300013297\|Ga0157378_12692944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	550	Open in IMG/M
3300013306\|Ga0163162_10931302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	981	Open in IMG/M
3300013307\|Ga0157372_11109871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	915	Open in IMG/M
3300013307\|Ga0157372_12171063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	638	Open in IMG/M
3300013307\|Ga0157372_13173947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	524	Open in IMG/M
3300013308\|Ga0157375_10005304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	11195	Open in IMG/M
3300013308\|Ga0157375_10043107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	4373	Open in IMG/M
3300013832\|Ga0120132_1027859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1025	Open in IMG/M
3300014326\|Ga0157380_13245954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	520	Open in IMG/M
3300014488\|Ga0182001_10160351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	779	Open in IMG/M
3300014968\|Ga0157379_12243441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300015261\|Ga0182006_1153736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	779	Open in IMG/M
3300015371\|Ga0132258_10588613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2792	Open in IMG/M
3300015372\|Ga0132256_101692250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	742	Open in IMG/M
3300015372\|Ga0132256_103469576	Not Available	530	Open in IMG/M
3300017792\|Ga0163161_11791174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	546	Open in IMG/M
3300020069\|Ga0197907_10083078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	501	Open in IMG/M
3300020076\|Ga0206355_1510121	Not Available	520	Open in IMG/M
3300020081\|Ga0206354_10289173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	721	Open in IMG/M
3300020082\|Ga0206353_10272547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1353	Open in IMG/M
3300020082\|Ga0206353_10897614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3996	Open in IMG/M
3300021384\|Ga0213876_10627060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300022756\|Ga0222622_11207654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	557	Open in IMG/M
3300025899\|Ga0207642_10745072	Not Available	620	Open in IMG/M
3300025900\|Ga0207710_10732095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	519	Open in IMG/M
3300025908\|Ga0207643_10306913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	988	Open in IMG/M
3300025911\|Ga0207654_11204142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	552	Open in IMG/M
3300025913\|Ga0207695_11282437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	613	Open in IMG/M
3300025919\|Ga0207657_10396196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1086	Open in IMG/M
3300025920\|Ga0207649_11440765	Not Available	545	Open in IMG/M
3300025921\|Ga0207652_10724107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	887	Open in IMG/M
3300025921\|Ga0207652_10815895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300025927\|Ga0207687_11921959	Not Available	506	Open in IMG/M
3300025930\|Ga0207701_11295285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	597	Open in IMG/M
3300025934\|Ga0207686_11411578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300025935\|Ga0207709_10207115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1405	Open in IMG/M
3300025944\|Ga0207661_10094029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2503	Open in IMG/M
3300025944\|Ga0207661_11690548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300025944\|Ga0207661_12037263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	520	Open in IMG/M
3300025961\|Ga0207712_10605969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	948	Open in IMG/M
3300025986\|Ga0207658_10983078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	770	Open in IMG/M
3300026067\|Ga0207678_11271626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300026078\|Ga0207702_10639397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1046	Open in IMG/M
3300027870\|Ga0209023_10247503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1155	Open in IMG/M
3300028379\|Ga0268266_10000509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	54900	Open in IMG/M
3300028651\|Ga0302171_10169889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	538	Open in IMG/M
3300028741\|Ga0302256_10007148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2574	Open in IMG/M
3300028784\|Ga0307282_10479613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300028802\|Ga0307503_10157002	Not Available	1039	Open in IMG/M
3300028802\|Ga0307503_10172707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1001	Open in IMG/M
3300028802\|Ga0307503_10699335	Not Available	569	Open in IMG/M
3300028856\|Ga0302295_1003049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2724	Open in IMG/M
3300030294\|Ga0311349_10000482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	36396	Open in IMG/M
3300031938\|Ga0308175_100126802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2405	Open in IMG/M
3300031938\|Ga0308175_100201304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1961	Open in IMG/M
3300031938\|Ga0308175_100204112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1949	Open in IMG/M
3300031938\|Ga0308175_100422740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1398	Open in IMG/M
3300031938\|Ga0308175_100483709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1313	Open in IMG/M
3300031938\|Ga0308175_100887026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	980	Open in IMG/M
3300031938\|Ga0308175_102098745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	634	Open in IMG/M
3300031938\|Ga0308175_102153073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	625	Open in IMG/M
3300031938\|Ga0308175_102264748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	609	Open in IMG/M
3300031938\|Ga0308175_102301926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	604	Open in IMG/M
3300031939\|Ga0308174_11099192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	676	Open in IMG/M
3300031939\|Ga0308174_11990241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	500	Open in IMG/M
3300031996\|Ga0308176_11008185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300032074\|Ga0308173_12062291	Not Available	538	Open in IMG/M
3300032896\|Ga0335075_11041009	Not Available	729	Open in IMG/M
3300033475\|Ga0310811_11321993	Not Available	570	Open in IMG/M
3300034268\|Ga0372943_0120068	Not Available	1569	Open in IMG/M
3300034268\|Ga0372943_0224583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1172	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.28%
Host-Associated	Host-Associated	35.59%
Engineered	Engineered	1.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.58%
Plants	Host-Associated → Plants	35.59%
Aquatic	Environmental → Aquatic	1.69%
Solid Waste	Engineered → Solid Waste	0.56%
Wastewater	Engineered → Wastewater	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.60%
Peat	Environmental → Terrestrial → Peat	2.26%
Roots	Host-Associated → Plants → Roots	1.69%
Freshwater	Environmental → Aquatic → Freshwater	0.56%
Marine	Environmental → Aquatic → Marine	0.56%
Sediment	Environmental → Aquatic → Sediment	0.56%
Rhizome	Host-Associated → Plants → Rhizome	0.56%
Grass	Engineered → Solid Waste → Grass	0.56%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.11%
Loam	Environmental → Terrestrial → Soil → Loam	18.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.26%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.13%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.13%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.56%
Composting	Engineered → Solid Waste → Grass → Composting	0.56%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.25%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.47%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.26%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.13%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.13%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.56%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.56%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.08%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.26%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.26%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.69%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.13%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.56%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.56%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.56%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.56%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_00549360	2170459014	Switchgrass, Maize And Mischanthus Litter	VWKFVLLLVVVAVGSYYAARLLLDGWPRRRPEDDTYVRPLGPDDDDEFLEQISKRPEGPQSPDDPS
JGIcombinedJ13530_1019063683	3300001213	Wetland	LLLVIVAVASYYAARFLLEGFPRRRPPRDEEFVRPLGPDDDDEFLAQLSRRDKPDDQS*
A1565W1_104654344	3300001536	Permafrost	LLLVIVAVGSYYAARFLLEGFPRRREHTETYQRPIGPDDDDEFLAQISQRKKGPEDPS*
C688J18823_108713081	3300001686	Soil	GHQSPPTLGRVWKFVLLLVVVAVGSYYAARFLLEGRPRRKRAVDAPYVRPMGPDDDDEFLSQISKHDRGPDDPA*
JGI24747J21853_10217343	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDK
C688J35102_1188412061	3300002568	Soil	DQGRPTLLCVWRFVLLLVVVAVGSYYAARFLLEGWPRRPRHDDDHYVRPFGPDDDDEFLARLSKRDPGPDDPT*
C688J35102_1193122711	3300002568	Soil	LLLVVVAVGSYYAARFLLEGWPRRRPTQHEEYQRPLGPDDDDEFLSQLSRRPKGPDDPS*
C688J35102_1197035301	3300002568	Soil	VLLLVIVAVGSYYAARFLLDGFPRWRRHDDEYVRPVGPDDDDEFLSEISRRDKGPDEQS*
C688J35102_1198905631	3300002568	Soil	VWKFVLLLVVVAVGSYYAARFLLEGLPRWRHRYDEDAYVRPFGPDDDDDFLSQISRKNRPDDG
C688J35102_1207875634	3300002568	Soil	VLLLVVVAVGSYYAARFLLEGRPRRKRAVDAPYVRPMGPDDDDEFLSQISKHDRGPDDPA
C688J35102_1208477722	3300002568	Soil	VLLLVVVAVGSYYAARFLLEGWPRRRSQDDDVYVRPYGPDDDDEFLSQISKRDRGPDDPA
C688J35102_1208486072	3300002568	Soil	VLLLVVVAVGSYYAARFLLEGWPRRSRHQDDPYVRPYGPDDDDEFLSRISKRDQGPDDPA
C688J35102_1208707522	3300002568	Soil	VLLLAVVAVGSYYAARFLLEGFPRWRHQDDVYVRPYGPDDDDEFLAEISRRENGQDDSS*
C688J35102_1208774345	3300002568	Soil	VWKFVLLLVIVAVGSYYAARFLLDGFPRWRRQDDEYVRPLGPDDDDEFLSQISRPDKGPDDQP*
rootH2_100684922	3300003320	Sugarcane Root And Bulk Soil	VWRFVLLLVVVAVGSYYAARFLLEGFPRRKPDEHHYVRPMGPDDDDEFLSQISRKKGPDDPI*
soilH2_101728281	3300003324	Sugarcane Root And Bulk Soil	VWRFVLLLVVVAVGSYYAARFLLEGFPRRKPEEHHYVRPMGPDDDDEFLSQISRKKGPDD
soilH2_103771253	3300003324	Sugarcane Root And Bulk Soil	VDHSPARPTPIYAVVVWRFLLLLVVVAVGSYYAARFLLEGFPRRWRDHARYVRPFGPDDDDEFLASISRKKGPEDPA*
Ga0063454_1005982471	3300004081	Soil	VLLLVVVAVGSYYAARFLLEGWPQRRPRQHEEYQRPLGPDDDDDFLAQLSRRPKGPDEPS
Ga0063454_1006641292	3300004081	Soil	VWRFVLLLVVVAVGSYYAARFLLEGLPRWRHRYDEDAYVRPFGPDDDDDFLSQISRKNRPDDGA*
Ga0063454_1006819412	3300004081	Soil	VLLLVVVAVGSYYAARFLLEGWPRRSRHDDETYVRPFGPDDDDEFLARLSKRDPGPDDPS
Ga0062593_1021559912	3300004114	Soil	VLLLAVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS*
Ga0063455_1005994812	3300004153	Soil	GPNSQVLALGHQSPPTLGRVWKFVLLLVVVAVGSYYAARFLLEGRPRRKRAVDAPYVRPMGPDDDDEFLSQISKHDRGPDDPA*
Ga0063455_1017016051	3300004153	Soil	VRVWRFVVLLVVVAVGSYYAARFLLEGFPRRPPRDDDAYVRPMGPDDDDEFLSQISRKKGPDDPS*
Ga0062590_1008417372	3300004157	Soil	HDPPFPTYSCGVWKFALLLVVVAVGSYYAARFLLEGFPRWRRREDDDYVRPFGPDDDDEFLSQISRRDKGPDDDKP*
Ga0062595_1001509751	3300004479	Soil	LLLVVVAVGSYYAARFLLEGWPHRRPKRPEEYQRPLGPDDDDEFLAELSRRPKGPDEPQ*
Ga0062595_1007559442	3300004479	Soil	VLLLVVVAVGSYYAARFLLEGWPRRSRHHDKPYVRPYGPDDDDEFLSRISKRDQGPDDPT
Ga0062595_1014539212	3300004479	Soil	LLLIVVAVGSYYAARFLLEGFPRRRPRHEEEEFVRPLGPDDDDEFLAQLARRKKPDDPS*
Ga0062591_1029540102	3300004643	Soil	VWKFALLLVVVAVGSYYAARFLLEGFPRWRRREDDDYVRPFGPDDDDEFLSQISRRDKGPDDDKP*
Ga0062594_1000633923	3300005093	Soil	VLLLVVVAVGSYYAARFLLEGWPRRSPREEQPYVRPYGPDDDDEFLSRISKRDQGPDDPA
Ga0062594_1009906722	3300005093	Soil	VLLLAVVAVSSYYAARFLLEGFPKWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS*
Ga0062594_1021134532	3300005093	Soil	VWKFVLLLAVVAVGSYYAARFLLEGFPRRSRHHDEYVRPFGPDDDDEFLAEISRRDKGQDDQG*
Ga0066808_10389602	3300005159	Soil	LLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDP
Ga0066809_102344592	3300005168	Soil	CRVWRFVLLLVVVAVGSYYAARFLLEGWPQRRPKHHEEYRRPLGPDDDDEFLAQLSRRPKGPDEPS*
Ga0070658_100120412	3300005327	Corn Rhizosphere	VLLLVVVAVGSYYAARFLLEGFPRRRPREDDRYVRPFGPDDDDEFLAQISRKKRPDDPS*
Ga0070658_106693461	3300005327	Corn Rhizosphere	VLLLIVVAVGSYYAARFLLEGFPRRPHREDVYVRPVGPDDDDEFLAQISRKKGPDDPA*
Ga0070683_1000123876	3300005329	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARLLLEGFPRHRRHDDEYVRPVGPDDDDEFLARISRKKGPEDPR*
Ga0070683_1018171872	3300005329	Corn Rhizosphere	VLLLVVVAVGSYYAARFLLEGWPHRRPRHHEQYQRPLGPDDDDEFLAQLSRRPKGPDEPS
Ga0066388_1017857451	3300005332	Tropical Forest Soil	VWKFVLLLAVVAVGSYYAARFLLEGFPRRRPHHEDEYVRPFGPDDDDEFLAEISRRDKGQDDQT*
Ga0066388_1069128442	3300005332	Tropical Forest Soil	VLLLVVVAVGSYYAARFLLEGWPRRSPREEQPYVRPYGPDDDDEFLAQISKRDPGQDDPS
Ga0070682_1001452131	3300005337	Corn Rhizosphere	VGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDNP*
Ga0070678_1018622721	3300005456	Miscanthus Rhizosphere	VLLLAVVAVGSYYAARFLLEGFPKWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS*
Ga0070678_1019014172	3300005456	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRSRHHDKPYVRPYGPDDDDEFLSRISKRDQGPDDPA*
Ga0070685_102784231	3300005466	Switchgrass Rhizosphere	TYSGAVWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS*
Ga0073909_104484452	3300005526	Surface Soil	AQRPPATYSGRVWRFVLLLVVVAVGSYYAARFLLEGWPHRRPKHHEEYQRPLGPDDDDDFLAKLSRRDKPDDQA*
Ga0070679_1008163001	3300005530	Corn Rhizosphere	VVAVGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDNP*
Ga0070679_1008210053	3300005530	Corn Rhizosphere	VLLLIVVAVGSYYAARFLLEGFPRRPHREDVYVRPVGPDDDDEFLAQISRKKGPDDPT*
Ga0070684_1000539083	3300005535	Corn Rhizosphere	VWKFALLLVVVAVGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDNP*
Ga0070684_1013793432	3300005535	Corn Rhizosphere	VLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDPT*
Ga0070684_1021191132	3300005535	Corn Rhizosphere	LLLIVVAVGSYYAARFLLEGFPRRRPRREEEEFVRPLGPDDDDEFLAQLARRKKPDDPS*
Ga0070665_10000051641	3300005548	Switchgrass Rhizosphere	VRVWRFVLLLIVVAVGSYYAARFLLEGFPRRPHHDDEYVRPYGPDDDDEFLEGISRKKGPEDTP*
Ga0070665_1017794222	3300005548	Switchgrass Rhizosphere	VLLLVIVAVGSYYAARFLLEGFPRWRRQYDEDEYVRPYGPDDDDEFLSEISRKKGPDDQA
Ga0068855_1008549432	3300005563	Corn Rhizosphere	VLLLIVVAVGSYYAARFLLEGFPRRPHREDVYVRPVGPDDDDEFLAQISRKKRPDDPS*
Ga0070664_1004087962	3300005564	Corn Rhizosphere	VWKFALLLVVVAVGSYYAARFLLAGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS*
Ga0068852_1006702832	3300005616	Corn Rhizosphere	LLLVVVAVGSYYAARFLLEGWPPRRPRHHEEYQRPLGPDDDDEFLAELSRRPKGPDEPS*
Ga0068864_1015640942	3300005618	Switchgrass Rhizosphere	VLLLVVVAVGSYYAARFLLEGWPQRGPKQPEEYQRPLGPDDDDDFLSQLSRRPKGPDEPS
Ga0066903_1004419512	3300005764	Tropical Forest Soil	VLLLAIVAVGSYYAARFLLEGWPRRTRRTEEFQRPVGPDDDDEFLAQLAKRNKRPDEPS*
Ga0066903_1040744772	3300005764	Tropical Forest Soil	HVWRFVLLLAVVAVGSYYAARFLLEGWPRRHDREDEYVRPYGPDDDDEFLARISKRDKGPDDPD*
Ga0066652_1012163812	3300006046	Soil	VWRFLLLLVVVGVGSYYAARFLLEGFPKIRRRQDDHYVRPYGPDDDDEFLSEISRKKGPDDPA*
Ga0068871_1005527611	3300006358	Miscanthus Rhizosphere	ATYSCRVWRFVLLLVVVAVGSYYAARFLLEGWPHRRPKRPEEYQRPLGPDDDDEFLAELSRRPKGPDEPQ*
Ga0068871_1008532951	3300006358	Miscanthus Rhizosphere	GSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS*
Ga0074047_119420504	3300006576	Soil	VLLLVVVAVGSYYAARFLLEGWPQRRPKHHEEYRRPLGPDDDDEFLAQLSRRPKGPDEPS
Ga0074047_119749283	3300006576	Soil	LLLVVVAVGSYYAARFLLEGWPRHRPKQPEEYQRPLGPDDDDEFLAELSRRPKGPDEPS*
Ga0074049_131137641	3300006580	Soil	LLLVVVAVGSYYAARFLLEGWPQRRPKHHEEYRRPLGPDDDDEFLAQLSRRP
Ga0074060_117734762	3300006604	Soil	PATYSCRVWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDPT*
Ga0074062_127950521	3300006606	Soil	DHRRPTLGRVWRFVLLLVIVAVASYYAARFLLEGFPRRRPPRDEEFVRPLGPDDDDEFLAQLSRRDKPDDPA*
Ga0079221_106081472	3300006804	Agricultural Soil	VLLLVVVAVGSYYAARFLLEGFPRVRRHQDEYVRPLGPDDDDEFLARISRKKGPDDPS*
Ga0074063_138882822	3300006953	Soil	VLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPLGPDDDDEFLAQLSRRPKGPDEPS
Ga0105245_1000104519	3300009098	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS*
Ga0105245_112386683	3300009098	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRSRHHDKPYVRPYGPDDDDEFLSRISKRDQGPDDPT*
Ga0105245_121902942	3300009098	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDPT*
Ga0105245_124128552	3300009098	Miscanthus Rhizosphere	VWRFALLLIVVAVGSYYAARFLLEGFPRRRPRREEEEFVRPLGPDDDDEFLAQLSRRKKPDDPS*
Ga0105247_105073072	3300009101	Switchgrass Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPQRRPRHHEEYQRPLGPDDDDEFLAELSRRPKGPDEPS*
Ga0105247_107072061	3300009101	Switchgrass Rhizosphere	LLLVVVAVGSYYAARFLLEGWPRRRPKQPEEYQRPLGPDDDDEFLAELSRRPKGPDEPS*
Ga0105242_105212271	3300009176	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLGGWPRRSRHHDKPYVRPYGPDDDDEFLSRISKR
Ga0126313_108499711	3300009840	Serpentine Soil	VWKFVLLLVIVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRDNGQDDSS*
Ga0131092_100219953	3300009870	Activated Sludge	VWRFVLLLVIVAVGSYYAARFLLEGFPRRRPQHEEEYVRPLGPDDDDEFLAQLSKRQKPDDPAT*
Ga0126308_105551112	3300010040	Serpentine Soil	VWKIVLLLVIVAVGSYYAARFLLDGFPRWRRQDDQYVRPVGPDDDDEFLSQISRRDKGPDDQS*
Ga0126308_113116312	3300010040	Serpentine Soil	VGSYYAARFLLEGFPRWRRQDDEYVRPLGPDDDDEFLSQISRRDKGPDDQS*
Ga0126312_109070661	3300010041	Serpentine Soil	VWKFLLLLVIVAIGSYYAARFLLEGFPRWRRQDDEYVRPLGPDDDDEFLSQISRRDKGPDDQS*
Ga0126380_114026122	3300010043	Tropical Forest Soil	VWRFVLLLAVVAVGSYYAARFLLEGWPRRHDREDEYVRPYGPDDDDEFLARISKRDKGPDDPD*
Ga0126310_100188022	3300010044	Serpentine Soil	VWRFVLLLVIVAVGSYYAARFLLEGFPRGRRHDDEYVRPLGPDDDDEFLSEISRRDKGPDDPS*
Ga0126306_113018602	3300010166	Serpentine Soil	RARHRPCPTYAGGVWKFVLLLVIVAVGSYYAARFLLEGFPRWRRQDDEYVRPLGPDDDDEFLSQISRRDKGPDEQP*
Ga0126372_112151952	3300010360	Tropical Forest Soil	VWRFVLLLVIVAVGSYYAARFLLEGFPRRKPPRDDEYVRPMGPDDDDEFLAQLARRDKPDDPAT*
Ga0126377_112007352	3300010362	Tropical Forest Soil	VWKFVLLLVVVAVGSYYAARFLLEGFPRWRRHDEDDVYVRPYGPDDDDEFLSQISRRDKGSDDQP*
Ga0126377_125050852	3300010362	Tropical Forest Soil	VWRFVLLLVVVAVGSYYAARFLLEGWPRRPHRDDDVYVRPYGPDDDDEFLSRISKRDQGPDDPT*
Ga0105246_110136282	3300011119	Miscanthus Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPKWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS*
Ga0120152_10770872	3300012011	Permafrost	VWRFLLLLVIVAVGSYYAARFLLEGFPRRREHTETYQRPIGPDDDDEFLAQISQRKKGPEDPS*
Ga0150985_1074116182	3300012212	Avena Fatua Rhizosphere	FVLLLVVVAVGSYYAARFLLEGWPQRRPRQHEEYQRPLGPDDDDDFLAQLSRRPKGPDEPS*
Ga0150985_1143075423	3300012212	Avena Fatua Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPRWRHQDDVYVRPYGPDDDDDFLAEISRRENGQDDSS*
Ga0150985_1167253043	3300012212	Avena Fatua Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGFPRRPHRDDDAYVRPMGPDDDDEFLSQISRKKGPDDPS*
Ga0150985_1176873712	3300012212	Avena Fatua Rhizosphere	AVGSYYAARFLLEGWPRRRPARHEEYHRPLGPDDDDEFLAQLSRRPEGPDEPS*
Ga0134053_11147892	3300012406	Grasslands Soil	SYYAARFLLEGWPQRRPKQPEQYQRPLGPDDDDEFLAQLSRRDKPDDPS*
Ga0150984_1079710153	3300012469	Avena Fatua Rhizosphere	VVAVGSYYAARFLLEGRPRRKRAVDAPYVRPMGPDDDDEFLSQISKHDRGPDDPA*
Ga0150984_1217569402	3300012469	Avena Fatua Rhizosphere	FVLLLVVVAVGSYYAARFLLEGWPHRSPQKHEEYQRPLGPDDDDEFLAQLSRRDKPDDPS
Ga0150984_1218793852	3300012469	Avena Fatua Rhizosphere	WRFVLLLVVVAVGSYYAARFLLEGWPQRRPRQHEEYQRPLGPDDDDDFLAQLSRRPKGPDEPS*
Ga0164241_100059068	3300012943	Soil	VWKFALLLVVVAVGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDKP*
Ga0164241_100570644	3300012943	Soil	VWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPFGPDDDDEFLSQISRKKGPDDPT*
Ga0164303_106145891	3300012957	Soil	MRRQLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDPT*
Ga0164299_105331422	3300012958	Soil	VWRFVLLLVVVAVGSYYAARFLLEGWPHRRPKRPEEYQRPLGPDDDDEFLAELSRRPKGPDEPQ*
Ga0126369_126608721	3300012971	Tropical Forest Soil	QQDLLLIVVAVGSYYAARFLLEGFPRRQHHDDEYVRPMGPDDDDEFLAEISRKKGPDDPH
Ga0164305_102119682	3300012989	Soil	LLLVVVAVGSYYAARFLLEGWPRRRPKQPEEYQRPLGPDDDDEFLAELSRRPKGPDEPQ*
Ga0164305_104288382	3300012989	Soil	VWRFVLLLVVVAVGSYYAARFLLEGWPRRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDPTGRRLSRRGG*
Ga0157371_110359142	3300013102	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRRPRHHEEYQRPFGPDDDDEFLAELSRRPKGPDEPS*
Ga0157369_109923622	3300013105	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRRPGQPEEYRRPLGPDDDDDFLAQLSRRPKGPDEPS*
Ga0157374_114586582	3300013296	Miscanthus Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS*
Ga0157378_126929441	3300013297	Miscanthus Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPRRSRHHDEYVRPFGPDDDDEFLAEISR
Ga0163162_109313022	3300013306	Switchgrass Rhizosphere	LLLIVVAVGSYYAARFLLEGFPRRRPRREEEEFVRPLGPDDDDEFLAQLSRRKKPDDPS*
Ga0157372_111098711	3300013307	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGFPRRRPREDDRYVRPFGPDDDDEFLAQISRKKRPDDPS*
Ga0157372_121710632	3300013307	Corn Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPRRSRHHDEYVRPFGPDDDDEFLAEIS
Ga0157372_131739471	3300013307	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRRPGQPEEYQRPLGPDDDDDFLAQLSRRPKGPDEPS*
Ga0157375_1000530411	3300013308	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDAEDVRPMGPDDDDEFLAQISRPDKGPDDPS*
Ga0157375_100431072	3300013308	Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPQRGPKQPEEYQRPLGPDDDDDFLSQLSRRPKGPDEPS*
Ga0120132_10278592	3300013832	Permafrost	VWRFLLLLVIVAVGSYYAARFLLEGFPRRRDHTETYQRPLGPDDDDEFLAQLSRREKGPEEPG*
Ga0157380_132459542	3300014326	Switchgrass Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLADISRWENGQDDSS*
Ga0182001_101603511	3300014488	Soil	GSYYAARFLLEGFPRRREHSESYRRPMGPDDDDEFLAQLSRRDKGPDDQS*
Ga0157379_122434411	3300014968	Switchgrass Rhizosphere	VGSYYAARFLLEGFPRRRPRREEEEFVRPLGPDDDDEFLAQLSRRKKPDDPS*
Ga0182006_11537361	3300015261	Rhizosphere	RRPGATYSCRVWKFVLLLVIVAVGSYYAARFLLEGFPRRSDHDDAYVRPYGPDDDDEFLAEISRKKGPDDPS*
Ga0132258_105886133	3300015371	Arabidopsis Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRRPRRDDDPYVRPFGPDDDDEFLAQLSKPDNGRDPGPDDPT*
Ga0132256_1016922502	3300015372	Arabidopsis Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPRRSRHHDQPYVRPYGPDDDDEFLSRISKRDQGP
Ga0132256_1034695762	3300015372	Arabidopsis Rhizosphere	RIVLLLVVVAVGSYYVARFLFEGWPRRRPRRDDDPYVRPFGPDDDDEFLAQLSKPDNGRDPGPDDPT*
Ga0132255_1008007511	3300015374	Arabidopsis Rhizosphere	GPQRPGATYSGPVWRFVLLLVVVAVGSYYAARFLLEGWPRRRPRRDDAPYVRPFGPDDDDEFLAQLSKPDNGRDPGPDDPT*
Ga0163161_117911742	3300017792	Switchgrass Rhizosphere	LLLVVVAVGSYYAARFLLEGWPQRGPKQPEEYQRPLGPDDDDDFLSQLSRRPKGPDEPS
Ga0197907_100830782	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGFPRRRPREDDRYVRPFGPDDDDEFLAQISRKKRPDDPS
Ga0206355_15101212	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	VVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPHKGPDDPS
Ga0206354_102891731	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VWRFVLLLVVVAVGSYYAARLLLEGFPRHRRHDDEYVRPVGPDDDDEFLARISRKKGPEDPR
Ga0206353_102725472	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS
Ga0206353_108976145	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLVVVAVGSYYAARFLLEGFPRRRPREDDRYVRPFGPDDDDEFLAQISRKKRPDDPS
Ga0213876_106270601	3300021384	Plant Roots	PGDHIRPSLAHVWRFVLLLVVVAVGSYYAARFLLEGFPRRPRHHVEYVRPVGPDDDDEFLAQISRKKGPDDAH
Ga0222622_112076542	3300022756	Groundwater Sediment	VLLLAVVAVGSYYAARFLLEGFPKWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS
Ga0207642_107450721	3300025899	Miscanthus Rhizosphere	RLPRSTYSGAVWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS
Ga0207710_107320951	3300025900	Switchgrass Rhizosphere	LLLVVVAVGSYYAARFLLEGWPHRRPKRPEEYQRPLGPDDDDEFLAELSRRPKGPD
Ga0207643_103069131	3300025908	Miscanthus Rhizosphere	VVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS
Ga0207654_112041422	3300025911	Corn Rhizosphere	AVGSYYAARFLLEGWPQRRPRHHEEYQRPLGPDDDDEFLAELSRRPKGPDEPS
Ga0207695_112824372	3300025913	Corn Rhizosphere	VWKFVLLLAVVAVGSYYAARFLLEGFPRRSRHHDEYVRPFGPDDDDEFLAEISRRDKGQDDQG
Ga0207657_103961962	3300025919	Corn Rhizosphere	DVWRFVLLLVVVAVGSYYAARFLLEGFPRRRPREDDRYVRPFGPDDDDEFLAQISRKKRPDDPS
Ga0207649_114407652	3300025920	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPFGPDDDDEFLAGLSQRKKPDDPT
Ga0207652_107241071	3300025921	Corn Rhizosphere	VLLLIVVAVGSYYAARFLLEGFPRRPHREDVYVRPVGPDDDDEFLAQISRKKGPDDPT
Ga0207652_108158952	3300025921	Corn Rhizosphere	AVGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDNP
Ga0207687_119219591	3300025927	Miscanthus Rhizosphere	PHNDHGRPTLGRVWRFALLLIVVAVGSYYAARFLLEGFPRRRPRREEEEFVRPLGPDDDDEFLAQLSRRKKPDDPS
Ga0207701_112952851	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLVVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS
Ga0207686_114115782	3300025934	Miscanthus Rhizosphere	IPGYRRADDQWPPTLGHVWRFVLLLVVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS
Ga0207709_102071152	3300025935	Miscanthus Rhizosphere	VLLLVVVAVGSYYAARFLLEGWPRRSRHHDKPYVRPYGPDDDDEFLSRISKRDQGPDDPA
Ga0207661_100940294	3300025944	Corn Rhizosphere	VWKFALLLVVVAVGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDNP
Ga0207661_116905482	3300025944	Corn Rhizosphere	AYSGRVWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRHHEQYQRPLGPDDDDEFLAQLSRRPKGPDEPS
Ga0207661_120372631	3300025944	Corn Rhizosphere	VWRFVLLLVVVAVGSYYAARFLLEGWPHRGPKQPEEYQRPLGPDDDDEFLSQLSRRPKGPDEPS
Ga0207712_106059693	3300025961	Switchgrass Rhizosphere	VLLLAVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRDKGQDDQG
Ga0207658_109830781	3300025986	Switchgrass Rhizosphere	VLLLAVVAVGSYYAARFLLEGFPRWRHQDDEYVRPYGPDDDDEFLAEISRRENGQDDSS
Ga0207678_112716262	3300026067	Corn Rhizosphere	VLLLVVVAVGSYYAARFLLEGFPRRRPREDDRYVRPFGPDDDDEFLAQISRK
Ga0207702_106393972	3300026078	Corn Rhizosphere	LLLVVVAVGSYYAARFLLEGWPHRRPKRPEEYQRPLGPDDDDEFLAELSRRPKGPDEPQ
Ga0209023_102475032	3300027870	Freshwater And Sediment	VWRFVLLLVVVAVGSYYAARFLLEGFPRRTRSHDEYVRPVGPDDDDEFLARISRKKGPDDPH
Ga0268266_1000050939	3300028379	Switchgrass Rhizosphere	VRVWRFVLLLIVVAVGSYYAARFLLEGFPRRPHHDDEYVRPYGPDDDDEFLEGISRKKGPEDTP
Ga0302171_101698891	3300028651	Fen	VLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPLGPDDDDEFLAGLPQRKKPDDPS
Ga0302256_100071482	3300028741	Fen	VWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRRDEEYRRPLGPDDDDEFLAQLSRRPKGPDEPS
Ga0307282_104796131	3300028784	Soil	VLLLVIVAVGSYYAARFLLEGFPKRSHHDDEYVRPYGPDDDDEFLSEISRRDQGPDDQS
Ga0307503_101570022	3300028802	Soil	LLLVVVAVGSYYAARFLLEGWPRRRPKQPEEYQRPLGPDDDDEFLAELSRRPKGPDEPS
Ga0307503_101727071	3300028802	Soil	LLLIVVAVGSYYAARFLLEGFPRRRPRHEEEEFVRPLGPDDDDEFLAQLARRKKPDDPS
Ga0307503_106993351	3300028802	Soil	AYSCPVWRFVLLLVVVAVGSYYAARFLLEGWPRRPHHDDDDVYVRPFGPDDDDEFLSQISKRDRGPDDPT
Ga0302295_10030493	3300028856	Fen	PATYSCRVWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPLGPDDDDEFLAGLPQRKKPDDPS
Ga0311349_100004821	3300030294	Fen	HHPPATYSCRVWRFVLLLVVVAVGSYYAARFLLEGWPHRRPRHHEEYQRPLGPDDDDEFLAGLPQRKKPDDPS
Ga0308175_1001268023	3300031938	Soil	VWRFLLLLVVVGVGSYYAARFLLEGFPRMRRRQDDPYVRPYGPDDDDEFLARISRKKGPDDQA
Ga0308175_1002013042	3300031938	Soil	VLLLVIVAVGSYYAARFLLEGFPRRRHEDDVYVRPMGPDDDDEFLSRISRKKGPDDSL
Ga0308175_1002041122	3300031938	Soil	MLLVIVAVASYYAARFLLEGFPRRRPPRDEEFVRPLGPDDDDEFMAQLSRRDKPDDQA
Ga0308175_1004227402	3300031938	Soil	VRVWRFVLLLVVVAVGSYYAARFLLEGFPRLRHRDDEYVRPYGPDDDDEFLAQISRKKGPGPDDPS
Ga0308175_1004837094	3300031938	Soil	VLLLVIVAVGSYYAARFLLEGWPQRGPKQPEEYQRPLGPDDDDDFLSQLSRRPKGPDEPS
Ga0308175_1008870261	3300031938	Soil	QARPTLGPVWRFVLLLIVVAVGSYYAARFLLEGLPRRRRPRQEEEFVRPLGPDDDDEFLAQLSRRNKPDDQG
Ga0308175_1020987452	3300031938	Soil	VLLLIVVAVGSYYAARFLLEGFPRRPHREDVYVRPVGPDDDDEFLAQISRKKGPDDPA
Ga0308175_1021530732	3300031938	Soil	LLLVIVAVGSYYAARFLLEGFPRRRDRSQTYRRPMGPDDDDDFLAQISRRKKGPDDLG
Ga0308175_1022647482	3300031938	Soil	VLLLIVVAVGSYYAARFLLEGWPRRRRQPPAPYTRPPCPDDDDEFLAELARRPKKPDEPS
Ga0308175_1023019261	3300031938	Soil	VLLLVIVAVGSYYAARFLLEGFPRWRRRYDEDEYVRPYGPDDDDEFLSEISRKKGPDEAP
Ga0308174_110991922	3300031939	Soil	LLLIVVAVGSYYAARFLLEGLPRRRRPRQEEEFVRPLGPDDDDEFLAQLSRRNKPDDQG
Ga0308174_119902411	3300031939	Soil	LLLVIVAVGSYYAARFLLEGFPRKGDHTETYRRPMGPDDDDEFLAQLSRREKGPDEPS
Ga0308176_110081852	3300031996	Soil	LLLVVVAVGSYYAARFLLEGLPRWRRREDDEYVRPYGPDDDDEFLSQISRRDKGPDDNP
Ga0308173_120622912	3300032074	Soil	AHGRPTLGRVWRFVLLLVIVAVGSYYAARFLLEGFPRRKPPRDDEYVRPMGPDDDDEFLAQLSRRDKPDDPAT
Ga0335075_110410092	3300032896	Soil	VWRFVLLLVVVAVGSYYAARFLLEGFPRRPRQPEEYVRPYGPDDDDDFLAQISRKKGPDDPR
Ga0310811_113219931	3300033475	Soil	PRSTYSGAVWRFVLLLVVVAVGSYYAARFLLEGFPRRPRRDDDEYVRPMGPDDDDEFLAQISRPDKGPDDPS
Ga0372943_0120068_1211_1402	3300034268	Soil	VWRFLLLLVIVAVGSYYAARFLLEGFPHRRDHSESYRRPMGPDDDDEFLAQLSRREKGPDEPG
Ga0372943_0224583_594_773	3300034268	Soil	LLLLVIVAVGSYYAARFLLEGFPRRVRRSHTYQRPMGPDDDDDFLAQLSRRKNGPDEPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences