NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F033346

Metagenome / Metatranscriptome Family F033346

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F033346
Family Type Metagenome / Metatranscriptome
Number of Sequences 177
Average Sequence Length 57 residues
Representative Sequence MPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Number of Associated Samples 152
Number of Associated Scaffolds 177

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.32 %
% of genes near scaffold ends (potentially truncated) 35.59 %
% of genes from short scaffolds (< 2000 bps) 75.14 %
Associated GOLD sequencing projects 142
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.921 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.994 % of family members)
Environment Ontology (ENVO) Unclassified
(28.249 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(31.638 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.59%    β-sheet: 16.47%    Coil/Unstructured: 52.94%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.58.29.1: Adenylyl and guanylyl cyclase catalytic domaind1azsa_1azs0.68614
d.58.29.0: automated matchesd2wz1a_2wz10.67486
d.58.5.0: automated matchesd6mm2a16mm20.65402
e.8.1.1: DNA polymerase Id1x9ma21x9m0.64021
d.58.21.0: automated matchesd3jqka_3jqk0.63437


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 177 Family Scaffolds
PF10759BPA 34.46
PF01979Amidohydro_1 10.17
PF00581Rhodanese 5.65
PF00311PEPcase 5.65
PF13594Obsolete Pfam Family 3.39
PF028262-Hacid_dh_C 2.26
PF13147Obsolete Pfam Family 1.69
PF00005ABC_tran 1.13
PF07969Amidohydro_3 1.13
PF13857Ank_5 1.13
PF13555AAA_29 0.56
PF02653BPD_transp_2 0.56
PF00171Aldedh 0.56
PF08240ADH_N 0.56
PF02738MoCoBD_1 0.56
PF04519Bactofilin 0.56
PF04079SMC_ScpB 0.56
PF04909Amidohydro_2 0.56
PF00109ketoacyl-synt 0.56
PF00067p450 0.56
PF01315Ald_Xan_dh_C 0.56
PF00011HSP20 0.56
PF00596Aldolase_II 0.56
PF14659Phage_int_SAM_3 0.56
PF12399BCA_ABC_TP_C 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 177 Family Scaffolds
COG2352Phosphoenolpyruvate carboxylaseEnergy production and conversion [C] 5.65
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.56
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.56
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.56
COG1386Chromosome segregation and condensation protein ScpBTranscription [K] 0.56
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.56
COG2124Cytochrome P450Defense mechanisms [V] 0.56
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.56


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.92 %
UnclassifiedrootN/A18.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_9187129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4146Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101234556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales694Open in IMG/M
3300000956|JGI10216J12902_105566299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4647Open in IMG/M
3300002886|JGI25612J43240_1053362All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium603Open in IMG/M
3300002914|JGI25617J43924_10219423Not Available635Open in IMG/M
3300003324|soilH2_10017297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4474Open in IMG/M
3300003347|JGI26128J50194_1010439All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300003505|JGIcombinedJ51221_10323013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria628Open in IMG/M
3300004009|Ga0055437_10134489All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300004052|Ga0055490_10207231All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300004062|Ga0055500_10083609All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300004114|Ga0062593_100855241All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300004156|Ga0062589_100009624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3927Open in IMG/M
3300004157|Ga0062590_100223915All Organisms → cellular organisms → Bacteria1387Open in IMG/M
3300004267|Ga0066396_10040981Not Available712Open in IMG/M
3300004463|Ga0063356_100072638All Organisms → cellular organisms → Bacteria3588Open in IMG/M
3300004479|Ga0062595_100892451All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300005206|Ga0068995_10006139All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300005294|Ga0065705_10487817Not Available790Open in IMG/M
3300005295|Ga0065707_11043463Not Available528Open in IMG/M
3300005332|Ga0066388_102431898All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300005434|Ga0070709_10387603All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300005437|Ga0070710_10269230All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300005444|Ga0070694_100001215All Organisms → cellular organisms → Bacteria14868Open in IMG/M
3300005444|Ga0070694_100029464All Organisms → cellular organisms → Bacteria3582Open in IMG/M
3300005444|Ga0070694_101726522Not Available533Open in IMG/M
3300005445|Ga0070708_100304187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1502Open in IMG/M
3300005445|Ga0070708_100908839Not Available826Open in IMG/M
3300005445|Ga0070708_101027950All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300005468|Ga0070707_100060952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3618Open in IMG/M
3300005529|Ga0070741_10001223All Organisms → cellular organisms → Bacteria80673Open in IMG/M
3300005543|Ga0070672_100139428All Organisms → cellular organisms → Bacteria → Proteobacteria1999Open in IMG/M
3300005713|Ga0066905_100253808All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300005875|Ga0075293_1033483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria697Open in IMG/M
3300005937|Ga0081455_10008006All Organisms → cellular organisms → Bacteria11045Open in IMG/M
3300005937|Ga0081455_10125044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2020Open in IMG/M
3300005937|Ga0081455_10456359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria871Open in IMG/M
3300006806|Ga0079220_10714148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales739Open in IMG/M
3300006806|Ga0079220_11016267All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300006845|Ga0075421_101371820Not Available779Open in IMG/M
3300006880|Ga0075429_100568003All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300006904|Ga0075424_100511475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1282Open in IMG/M
3300009038|Ga0099829_10000767All Organisms → cellular organisms → Bacteria16961Open in IMG/M
3300009038|Ga0099829_10874743All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300009078|Ga0105106_10225095All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300009088|Ga0099830_10020117All Organisms → cellular organisms → Bacteria → Proteobacteria4330Open in IMG/M
3300009088|Ga0099830_11227551All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300009089|Ga0099828_10007134All Organisms → cellular organisms → Bacteria8106Open in IMG/M
3300009093|Ga0105240_12799699Not Available501Open in IMG/M
3300009101|Ga0105247_11656857All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009147|Ga0114129_10809608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1194Open in IMG/M
3300009162|Ga0075423_11114860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria841Open in IMG/M
3300009821|Ga0105064_1124897Not Available541Open in IMG/M
3300010048|Ga0126373_11916102Not Available656Open in IMG/M
3300010359|Ga0126376_12143935Not Available603Open in IMG/M
3300010362|Ga0126377_10574134All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300010391|Ga0136847_11728745Not Available518Open in IMG/M
3300010400|Ga0134122_11595184Not Available676Open in IMG/M
3300012096|Ga0137389_10060404All Organisms → cellular organisms → Bacteria2897Open in IMG/M
3300012189|Ga0137388_10282290All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300012189|Ga0137388_11603982Not Available586Open in IMG/M
3300012189|Ga0137388_11608309Not Available585Open in IMG/M
3300012361|Ga0137360_10103922All Organisms → cellular organisms → Bacteria2179Open in IMG/M
3300012363|Ga0137390_10581937All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300012685|Ga0137397_10041847All Organisms → cellular organisms → Bacteria3277Open in IMG/M
3300012931|Ga0153915_10037948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4879Open in IMG/M
3300012931|Ga0153915_11207518All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300012931|Ga0153915_11400161All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300012957|Ga0164303_10451057All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300013297|Ga0157378_11993677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria630Open in IMG/M
3300014308|Ga0075354_1000807All Organisms → cellular organisms → Bacteria → Proteobacteria3144Open in IMG/M
3300014320|Ga0075342_1155713All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300014885|Ga0180063_1024658All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300014885|Ga0180063_1119817All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300015261|Ga0182006_1129396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria870Open in IMG/M
3300017927|Ga0187824_10042753All Organisms → cellular organisms → Bacteria1386Open in IMG/M
3300017997|Ga0184610_1042047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1325Open in IMG/M
3300018000|Ga0184604_10000109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6237Open in IMG/M
3300018028|Ga0184608_10449944Not Available555Open in IMG/M
3300018031|Ga0184634_10504563Not Available540Open in IMG/M
3300018051|Ga0184620_10298808Not Available543Open in IMG/M
3300018052|Ga0184638_1020597All Organisms → cellular organisms → Bacteria2329Open in IMG/M
3300018053|Ga0184626_10026297All Organisms → cellular organisms → Bacteria2385Open in IMG/M
3300018056|Ga0184623_10037670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria2192Open in IMG/M
3300018075|Ga0184632_10023952All Organisms → cellular organisms → Bacteria2591Open in IMG/M
3300018076|Ga0184609_10349549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria690Open in IMG/M
3300018078|Ga0184612_10062074All Organisms → cellular organisms → Bacteria1948Open in IMG/M
3300018422|Ga0190265_10001702All Organisms → cellular organisms → Bacteria → Proteobacteria14501Open in IMG/M
3300018422|Ga0190265_10025914All Organisms → cellular organisms → Bacteria4778Open in IMG/M
3300018422|Ga0190265_10612404All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300018429|Ga0190272_10328773All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300018429|Ga0190272_12476955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria564Open in IMG/M
3300018468|Ga0066662_11866459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria629Open in IMG/M
3300019233|Ga0184645_1319018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria580Open in IMG/M
3300019254|Ga0184641_1047365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria564Open in IMG/M
3300019259|Ga0184646_1283795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria572Open in IMG/M
3300019360|Ga0187894_10061891All Organisms → cellular organisms → Bacteria2134Open in IMG/M
3300019458|Ga0187892_10001421All Organisms → cellular organisms → Bacteria → Proteobacteria54788Open in IMG/M
3300019789|Ga0137408_1220448All Organisms → cellular organisms → Bacteria1614Open in IMG/M
3300019866|Ga0193756_1028708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria784Open in IMG/M
3300019879|Ga0193723_1016846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria2262Open in IMG/M
3300019882|Ga0193713_1099527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria810Open in IMG/M
3300019890|Ga0193728_1112106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1247Open in IMG/M
3300019997|Ga0193711_1000665All Organisms → cellular organisms → Bacteria4455Open in IMG/M
3300019998|Ga0193710_1006237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1197Open in IMG/M
3300020001|Ga0193731_1122397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria659Open in IMG/M
3300020006|Ga0193735_1179044Not Available524Open in IMG/M
3300020006|Ga0193735_1189810All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium500Open in IMG/M
3300020018|Ga0193721_1136654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria603Open in IMG/M
3300020021|Ga0193726_1067123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1674Open in IMG/M
3300020150|Ga0187768_1008741All Organisms → cellular organisms → Bacteria → Proteobacteria2065Open in IMG/M
3300020581|Ga0210399_10051015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3324Open in IMG/M
3300021078|Ga0210381_10172145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria744Open in IMG/M
3300021088|Ga0210404_10401300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria766Open in IMG/M
3300021178|Ga0210408_10401779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1091Open in IMG/M
3300021178|Ga0210408_10593889All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300021559|Ga0210409_10943669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria737Open in IMG/M
3300022533|Ga0242662_10176005Not Available661Open in IMG/M
3300022724|Ga0242665_10192291Not Available668Open in IMG/M
3300022726|Ga0242654_10222924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria665Open in IMG/M
3300025165|Ga0209108_10015580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4292Open in IMG/M
3300025535|Ga0207423_1003251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2339Open in IMG/M
3300025885|Ga0207653_10009151All Organisms → cellular organisms → Bacteria3088Open in IMG/M
3300025907|Ga0207645_10043316All Organisms → cellular organisms → Bacteria2881Open in IMG/M
3300025910|Ga0207684_10000711All Organisms → cellular organisms → Bacteria39198Open in IMG/M
3300025922|Ga0207646_11730218Not Available536Open in IMG/M
3300025930|Ga0207701_10618442All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella921Open in IMG/M
3300025934|Ga0207686_11160475Not Available631Open in IMG/M
3300025962|Ga0210070_1026033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria689Open in IMG/M
3300025965|Ga0210090_1028875All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300025971|Ga0210102_1108232All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300025999|Ga0208417_103316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria731Open in IMG/M
3300026015|Ga0208286_1015310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria601Open in IMG/M
3300026054|Ga0208659_1021674Not Available512Open in IMG/M
3300026067|Ga0207678_10001044All Organisms → cellular organisms → Bacteria → Proteobacteria25314Open in IMG/M
3300026118|Ga0207675_100938566Not Available882Open in IMG/M
3300026285|Ga0209438_1010491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3118Open in IMG/M
3300026354|Ga0257180_1012246All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300026481|Ga0257155_1027543Not Available838Open in IMG/M
3300026535|Ga0256867_10022880All Organisms → cellular organisms → Bacteria2660Open in IMG/M
3300026551|Ga0209648_10222725All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1420Open in IMG/M
3300026747|Ga0207587_102581All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes526Open in IMG/M
3300027013|Ga0209884_1020998Not Available660Open in IMG/M
3300027181|Ga0208997_1018851Not Available965Open in IMG/M
3300027384|Ga0209854_1057079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria677Open in IMG/M
3300027614|Ga0209970_1013231All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300027651|Ga0209217_1158514Not Available624Open in IMG/M
3300027765|Ga0209073_10046496All Organisms → cellular organisms → Bacteria1410Open in IMG/M
3300027765|Ga0209073_10301722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria635Open in IMG/M
3300027787|Ga0209074_10048185All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300027815|Ga0209726_10270005All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium848Open in IMG/M
3300027846|Ga0209180_10013084All Organisms → cellular organisms → Bacteria4320Open in IMG/M
3300027979|Ga0209705_10349533All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300028380|Ga0268265_10028886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3975Open in IMG/M
3300028536|Ga0137415_10260908All Organisms → cellular organisms → Bacteria1540Open in IMG/M
3300028799|Ga0307284_10319396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria626Open in IMG/M
3300030006|Ga0299907_10189142All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300031093|Ga0308197_10302366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria590Open in IMG/M
(restricted) 3300031150|Ga0255311_1009642All Organisms → cellular organisms → Bacteria1941Open in IMG/M
(restricted) 3300031197|Ga0255310_10137162All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300031229|Ga0299913_10095357All Organisms → cellular organisms → Bacteria2899Open in IMG/M
(restricted) 3300031248|Ga0255312_1156308Not Available569Open in IMG/M
3300031421|Ga0308194_10241374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria602Open in IMG/M
3300031716|Ga0310813_12307834All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium510Open in IMG/M
3300031720|Ga0307469_10271869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1378Open in IMG/M
3300031720|Ga0307469_11246610All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300031720|Ga0307469_12414939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300031740|Ga0307468_100850383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria784Open in IMG/M
3300031740|Ga0307468_102271626All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300032180|Ga0307471_100356831All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300032180|Ga0307471_104017438Not Available520Open in IMG/M
3300033432|Ga0326729_1010457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria1628Open in IMG/M
3300033432|Ga0326729_1066370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria551Open in IMG/M
3300033433|Ga0326726_12086537All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300033513|Ga0316628_101185337All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300034090|Ga0326723_0020000All Organisms → cellular organisms → Bacteria2727Open in IMG/M
3300034155|Ga0370498_184247Not Available514Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.99%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.47%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.78%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.82%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.26%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.26%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.69%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.69%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.69%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.69%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.69%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.69%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.69%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.69%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.13%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.13%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.13%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.13%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.56%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.56%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.56%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.56%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.56%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.56%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.56%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.56%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.56%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003347Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PMHost-AssociatedOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004062Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005875Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300019998Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025535Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025962Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025965Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025999Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201 (SPAdes)EnvironmentalOpen in IMG/M
3300026015Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 (SPAdes)EnvironmentalOpen in IMG/M
3300026054Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026747Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A3-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027013Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027384Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICI_013670902088090015SoilMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEKVTR
INPhiseqgaiiFebDRAFT_10123455623300000364SoilMASYMMTCTHCGYEVMFRTEPDAKTEAVRHLRAFPTHGVKVTPSEDALIREAERLTR*
JGI10216J12902_10556629943300000956SoilMASYMMTCTHCGYEVMFRTEPDAKSEGVRHLRAFPTHGVKVTPSEDALSKEAERLTR*
JGI25612J43240_105336213300002886Grasslands SoilMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR*
JGI25617J43924_1021942323300002914Grasslands SoilMPSYXMTCTHCGYEVIFRTEPXAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKITR*
soilH2_1001729733300003324Sugarcane Root And Bulk SoilMATYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDVLMLEAEKVTR*
JGI26128J50194_101043923300003347Arabidopsis Thaliana RhizosphereMASYMMTCTHCGYEVMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDALIREAERLTR*
JGIcombinedJ51221_1032301323300003505Forest SoilMPTYTMSCTHCGYQVAFRTEPDAKTEGVRHLRQFPTHGVRVTPSEDALIREAERVTRS*
Ga0055437_1013448923300004009Natural And Restored WetlandsMPTYMMSCTHCAYEVVFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTAGR*
Ga0055490_1020723123300004052Natural And Restored WetlandsMATYMMTCTHCGYELMFHTEPDAKTEGVRHLRAFPTHGVKVTPSEDALMREAERGSR*
Ga0055500_1008360923300004062Natural And Restored WetlandsMPTYMMSCTHCAYEVVFRTEPDAKTEGVRHLLQFPAHGVKVTPSEEALIWEEERVTVGR*
Ga0062593_10085524123300004114SoilMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQEPTHGVKVTPSEDALMLEAEKVTR*
Ga0062589_10000962463300004156SoilMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPSHGVKVTPSEEAMIRDEERVTA*
Ga0062590_10022391523300004157SoilMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEKVTR*
Ga0066396_1004098123300004267Tropical Forest SoilFTMSCTHCAYEVVFRTEPDAKTEGIRHLLEFPSHGVKVTPSEDVLMWEAERVTRQ*
Ga0063356_10007263853300004463Arabidopsis Thaliana RhizosphereMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTAAR*
Ga0062595_10089245123300004479SoilMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALILETEKVTR*
Ga0068995_1000613943300005206Natural And Restored WetlandsMPTYLMSCTHCPYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA*
Ga0065705_1048781723300005294Switchgrass RhizosphereMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA*
Ga0065707_1104346323300005295Switchgrass RhizosphereLAVRLWLQEERPMPTYLMSCTHCGYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEEAMIRDEERVTV*
Ga0066388_10243189823300005332Tropical Forest SoilMATFTMSCTHCAYEVVFRTEPDAKTEGIRHLLEFPSHGVKVTPSEDVLMWEAERVTRQ*
Ga0070709_1038760323300005434Corn, Switchgrass And Miscanthus RhizosphereMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALSREAEKVTR*
Ga0070710_1026923023300005437Corn, Switchgrass And Miscanthus RhizosphereMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLGQQPTHGVKVTPSEDALIREAEKVTR*
Ga0070694_100001215153300005444Corn, Switchgrass And Miscanthus RhizosphereMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR*
Ga0070694_10002946463300005444Corn, Switchgrass And Miscanthus RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALM
Ga0070694_10172652213300005444Corn, Switchgrass And Miscanthus RhizosphereMPTYLMSCTHCAYEGAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA*
Ga0070708_10030418713300005445Corn, Switchgrass And Miscanthus RhizosphereMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR*
Ga0070708_10090883913300005445Corn, Switchgrass And Miscanthus RhizosphereRLHEEDDAMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKITR*
Ga0070708_10102795013300005445Corn, Switchgrass And Miscanthus RhizosphereMPSYMMSCTHCSYEVPFRTEAAAKTEGVRHLREFPTHGVKVTPSEDALMREAERVTG*
Ga0070707_10006095253300005468Corn, Switchgrass And Miscanthus RhizosphereMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEK
Ga0070741_10001223813300005529Surface SoilMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDVLMLEAEKVTK*
Ga0070672_10013942853300005543Miscanthus RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEKLTR*
Ga0066905_10025380843300005713Tropical Forest SoilYMMTCTHCGYEVMFRTEPDAKTEAVRHLRAFPTHGVKVTPSEDALIREAERLTR*
Ga0075293_103348323300005875Rice Paddy SoilMPTYTMSCTHCAYEVVFRAEADAKTEGVRHLRAFPTHGVKVTPSEEALMREAEKVTR*
Ga0081455_10008006103300005937Tabebuia Heterophylla RhizosphereMASYMMTCTHCGYEVMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDALMQQAEELTR*
Ga0081455_1012504413300005937Tabebuia Heterophylla RhizosphereMATYMMTCTHCGYEVMFRTEPDAKTEAVRHLRAFPTHGVKVTPSEDALIREAERLTR*
Ga0081455_1045635923300005937Tabebuia Heterophylla RhizosphereMPSYLMTCTHCAYEVMFRTEADAKTEGVRHLREFPTHGVKVTPSEDVLSREAERVTG*
Ga0079220_1071414823300006806Agricultural SoilMATFTMSCTHCAYEVVFRTEPDAKTEGIRHILEFPTHGIKVTPSEDVLMWEAERVTR*
Ga0079220_1101626723300006806Agricultural SoilMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMLEAEKVTR*
Ga0075421_10137182023300006845Populus RhizosphereMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTVGR*
Ga0075429_10056800323300006880Populus RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQEPTHGVKVTPSEDALMLEAEKLTR*
Ga0075424_10051147513300006904Populus RhizosphereLRLSEEDDAMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR*
Ga0099829_1000076763300009038Vadose Zone SoilMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR*
Ga0099829_1087474323300009038Vadose Zone SoilMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKITR*
Ga0105106_1022509523300009078Freshwater SedimentMPSYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPTHGVKVTPSEDALIRDEERVTA*
Ga0099830_1002011773300009088Vadose Zone SoilMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR*
Ga0099830_1122755123300009088Vadose Zone SoilMPSYMMSCTHCSYGVLFRTEVDAKTEGVRHLREFPTHGVKVTPSEDALIREAERVTR*
Ga0099828_1000713483300009089Vadose Zone SoilMMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR*
Ga0105240_1279969923300009093Corn RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLLQYPSHGVKVTPSEEAMIRDEERVTA*
Ga0105247_1165685723300009101Switchgrass RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEWVRHLWQEPTHGVKVTPSEDSLMLEAEKV
Ga0114129_1080960833300009147Populus RhizosphereEEDDAMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR*
Ga0075423_1111486023300009162Populus RhizosphereRLSEEDDAMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR*
Ga0105064_112489723300009821Groundwater SandMPTYMMSCTHCAYEVAFRKEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTAGR*
Ga0126373_1191610223300010048Tropical Forest SoilMATFTMSCTHCAYEVVFRTEPDAKTEGIRHLLEFPSHGVKVTPSEDVLMWEAERVTQQ*
Ga0126376_1214393523300010359Tropical Forest SoilMVSYMITCTHCGYEVMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDALSREAERLTR*
Ga0126377_1057413443300010362Tropical Forest SoilMGSYMMTCTHCGYEVMFRTEPDAKTEAVRHLRAFPTHGVKVTPSEEALIREAERLTR*
Ga0136847_1172874523300010391Freshwater SedimentMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVT
Ga0134122_1159518423300010400Terrestrial SoilMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEDRVTVAR*
Ga0137389_1006040453300012096Vadose Zone SoilMPTYTMSCTHCSYKVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR*
Ga0137388_1028229013300012189Vadose Zone SoilMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIRE
Ga0137388_1160398213300012189Vadose Zone SoilMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREE
Ga0137388_1160830913300012189Vadose Zone SoilMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREE
Ga0137360_1010392213300012361Vadose Zone SoilLHEEDDAMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKITR*
Ga0137390_1058193713300012363Vadose Zone SoilMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALI
Ga0137397_1004184733300012685Vadose Zone SoilMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPSHGVKVTPSEDAMIRDEERVTA*
Ga0153915_1003794873300012931Freshwater WetlandsMPSYTMSCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR*
Ga0153915_1120751823300012931Freshwater WetlandsMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKLTR*
Ga0153915_1140016123300012931Freshwater WetlandsMASYTMTCTHCGYEVVFRTEADAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR*
Ga0164303_1045105713300012957SoilMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKITR*
Ga0157378_1199367723300013297Miscanthus RhizosphereCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEKVTR*
Ga0075354_100080743300014308Natural And Restored WetlandsMPTYMMSCTHCAYEVVFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIWEEERVTVGR*
Ga0075342_115571313300014320Natural And Restored WetlandsMPTYLMSCTHCGYEVAFWTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIRDEERVTV*
Ga0180063_102465843300014885SoilCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR*
Ga0180063_111981723300014885SoilMPSYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA*
Ga0182006_112939623300015261RhizosphereYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEKVTR*
Ga0187824_1004275323300017927Freshwater SedimentMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMLEAEKITK
Ga0184610_104204713300017997Groundwater SedimentYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR
Ga0184604_1000010953300018000Groundwater SedimentMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0184608_1044994413300018028Groundwater SedimentMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTV
Ga0184634_1050456323300018031Groundwater SedimentMPTYTMSCTHCPYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR
Ga0184620_1029880823300018051Groundwater SedimentASVRTQEEGSMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0184638_102059723300018052Groundwater SedimentMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVTR
Ga0184626_1002629723300018053Groundwater SedimentMPTYTMSCTHCAYEVAFRTEPDAKSEGVRHLLQFPTHGVKVTPSEDALIREEERVTAAR
Ga0184623_1003767033300018056Groundwater SedimentMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR
Ga0184632_1002395253300018075Groundwater SedimentMPTYTMSCTHCAYEVAFRTEPDAKSEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR
Ga0184609_1034954913300018076Groundwater SedimentLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0184612_1006207443300018078Groundwater SedimentEEGPMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVNVTR
Ga0190265_1000170233300018422SoilMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIREEERVTAAR
Ga0190265_1002591423300018422SoilMPSYMMTCTHCGYERMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDVLIREEERVTG
Ga0190265_1061240423300018422SoilMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0190272_1032877323300018429SoilMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVKPSEDAMIRDEERVTA
Ga0190272_1247695513300018429SoilCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVTR
Ga0066662_1186645923300018468Grasslands SoilMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKITR
Ga0184645_131901823300019233Groundwater SedimentGPMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVA
Ga0184641_104736513300019254Groundwater SedimentGPMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0184646_128379513300019259Groundwater SedimentPMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERLTV
Ga0187894_1006189143300019360Microbial Mat On RocksMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTAGR
Ga0187892_10001421203300019458Bio-OozeMPSYMMSCTHCSYEVLFRTEGDAKTEGVRHLREFPTHGVKVTPSEDALIQEAERLTG
Ga0137408_122044823300019789Vadose Zone SoilMPTYLMSCSHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTE
Ga0193756_102870813300019866SoilMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0193723_101684633300019879SoilMPTYLMSCTHCPYEVPFRTEPGAKTEAVRHLLQFPSHGVKVTPSEDAMIRAEERVTA
Ga0193713_109952723300019882SoilMPTYLMSCTHCPYEVPFRTEPAAKTEAVRHLLQFPSHGVKVTPSEDAMIRAEERVTA
Ga0193728_111210613300019890SoilLLLRLHEEDDAMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0193711_100066513300019997SoilMPTYLMSCTHCPYEVPFRTEPAAKTEAVRHLLQFPTHGVKVTPSEEAMIRA
Ga0193710_100623723300019998SoilMPTYLMSCTHCPYEVPFRTEPAAKTEAVRHLLQFPTHGVKVTPSEEAMIRAEERVTA
Ga0193731_112239723300020001SoilAAYLRTREEGPMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0193735_117904413300020006SoilDDAMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0193735_118981013300020006SoilMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIRE
Ga0193721_113665423300020018SoilPLAAYLRTREEGPMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0193726_106712333300020021SoilMPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALILEAEKVTR
Ga0187768_100874113300020150Tropical PeatlandATYTMSCTHCGYQVAFRTEPDAKTEGVRHLRQFPTHGVKVTPSEDVLMREAERLTR
Ga0210399_1005101553300020581SoilMPTYTMSCTHCGYQVAFRTEPDAKTEGVRHLRQFPTHGVKVTPSEDALIREAERVTRY
Ga0210381_1017214513300021078Groundwater SedimentYTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0210404_1040130013300021088SoilMPIYTMRCTHCGYQVAFRTEPDAKTEGVRHLRQFPTHGVKVTPSEDALIREAERVTRY
Ga0210408_1040177933300021178SoilSYTMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0210408_1059388913300021178SoilMPTYTMSCTHCGYQVAFRTEPDAKTEGVRHLRQFPTHGVRVTPSEDALIREAERVTRS
Ga0210409_1094366913300021559SoilMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0242662_1017600513300022533SoilMTCTHCGYEVIFRTEPDAKTEGVRHLGQQPTHGVKVTPSEDALIREAEKVTR
Ga0242665_1019229123300022724SoilCTHCGYEVIFRTEPDAKTEGVRHLGQQPTHGVKVTPSEDALIREAEKVTR
Ga0242654_1022292413300022726SoilPSYTMTCTHCGYEVIFRTEPDAKTEGVRHLGQQPTHGVKVTPSEDALIREAEKVTR
Ga0209108_1001558043300025165SoilMASYMMTCTHCGYEVMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDVLIREEERVTG
Ga0207423_100325123300025535Natural And Restored WetlandsMPTYMMSCTHCAYEVVFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTAGR
Ga0207653_1000915143300025885Corn, Switchgrass And Miscanthus RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQEPTHGVKVTPSEDALMLEAEKVTR
Ga0207645_1004331623300025907Miscanthus RhizosphereMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPSHGVKVTPSEEAMIRDEERVTA
Ga0207684_10000711233300025910Corn, Switchgrass And Miscanthus RhizosphereMPSYMMSCTHCSYEVPFRTEAAAKTEGVRHLREFPTHGVKVTPSEDALMREAERVTG
Ga0207646_1173021813300025922Corn, Switchgrass And Miscanthus RhizosphereMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVT
Ga0207701_1061844213300025930Corn, Switchgrass And Miscanthus RhizosphereRLSAPQGEDEAMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQEPTHGVKVTPSEDALMLEAEKVTR
Ga0207686_1116047533300025934Miscanthus RhizosphereMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPSHGVKVTPSEEAMIRDEERVTA
Ga0210070_102603323300025962Natural And Restored WetlandsQEEGQMPTYLMSCTHCPYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0210090_102887513300025965Natural And Restored WetlandsMPTYMMSCTHCAYEVVFRTEPDAKTEGVRHLLQFPAHGVKVTPSEEALIWEEERVTVGR
Ga0210102_110823223300025971Natural And Restored WetlandsMATYMMTCTHCGYELMFHTEPDAKTEGVRHLRAFPTHGVKVTPSEDALMREAERGSR
Ga0208417_10331623300025999Rice Paddy SoilMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR
Ga0208286_101531023300026015Rice Paddy SoilCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR
Ga0208659_102167433300026054Natural And Restored WetlandsMPTYMMSCTHCAYEVVFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIWEEERVTVG
Ga0207678_10001044163300026067Corn RhizosphereMASYTMTCTHCGYEVVCRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEKVTR
Ga0207675_10093856613300026118Switchgrass RhizosphereMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTA
Ga0209438_101049123300026285Grasslands SoilMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPSHGVKVTPSEDAMIRDEERVTA
Ga0257180_101224613300026354SoilCTHCAYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEERVTVAR
Ga0257155_102754323300026481SoilSCVLSRLHEEDDAMPSYMMTCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0256867_1002288053300026535SoilMPSYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPSHGVKVTPSEDAMIRDEERVTVAR
Ga0209648_1022272513300026551Grasslands SoilMPSYMMTCTHCGYEVILRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0207587_10258123300026747SoilYMMTCTHCGYEVMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDALIREAERLTR
Ga0209884_102099813300027013Groundwater SandLRPFSAQKEGDPMPSYMMTCTHCSYEVLFRTEGDAKTEGVRHLREFPTHGVKVTPSEDALIREEERVTG
Ga0208997_101885133300027181Forest SoilTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0209854_105707913300027384Groundwater SandTYLMSCTHCAYEVAFRAEPDAKTEGVRHILQFPAHGVKVTPSEDAMILDEERVTA
Ga0209970_101323133300027614Arabidopsis Thaliana RhizosphereMASYMMTCTHCGYEVMFRTEPDAKTEGVRHLRAFPTHGVKVTPSEDALIREAERLTR
Ga0209217_115851423300027651Forest SoilMPSYTMTCTHCGYEVIFRTEPDAKTEGIRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0209073_1004649623300027765Agricultural SoilMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALTLEAEKVTR
Ga0209073_1030172223300027765Agricultural SoilMATFTMSCTHCAYEVVFRTEPDAKTEGIRHILEFPTHGIKVTPSEDVLMWEAERVTR
Ga0209074_1004818523300027787Agricultural SoilMATYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDVLMLEAEKVTR
Ga0209726_1027000523300027815GroundwaterMPTYTMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALILQEERVTVAR
Ga0209180_1001308413300027846Vadose Zone SoilMPTYTMSCTHCSYEVAFRTEPDAKTEGVRHLLQFPTHGVKVTPSEDALIREEE
Ga0209705_1034953323300027979Freshwater SedimentMPSYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQYPTHGVKVTPSEDALIRDEERVTA
Ga0268265_1002888663300028380Switchgrass RhizosphereMASYTMTCTHCGYEVVFRTEPDAKTEGVRHLWQQPTHGVKVTPSEDALMLEAEK
Ga0137415_1026090813300028536Vadose Zone SoilYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0307284_1031939623300028799SoilYLRTREEGPMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
Ga0299907_1018914223300030006SoilMPSYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPSHGVKVTPSEDAMIRDEERVTAAR
Ga0308197_1030236613300031093SoilPMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA
(restricted) Ga0255311_100964223300031150Sandy SoilMPTYLMSCTHCGYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTV
(restricted) Ga0255310_1013716223300031197Sandy SoilMPSYLMSCTHCGYEVAFWTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIRDEERVTA
Ga0299913_1009535723300031229SoilMPSYLMSCTHCGYEVAFRTEPDAKTEGVRHLLRFPSHGVKVTPSEDALIRDEERVTAAR
(restricted) Ga0255312_115630823300031248Sandy SoilMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALIREAEKVTR
Ga0308194_1024137423300031421SoilCTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALILETEKVTR
Ga0310813_1230783413300031716SoilMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMLEAEKVTR
Ga0307469_1027186933300031720Hardwood Forest SoilMPTYTMSCTHCAYEVPFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTVAR
Ga0307469_1124661023300031720Hardwood Forest SoilMPTYTMSCTHCGYQVAFRTEPDAKTEGVRHLRQFPTHGVRVTPSEDALIREAERVTRY
Ga0307469_1241493913300031720Hardwood Forest SoilPMPSYMMSCTHCSYEVPFRTEAAAKTEGVRHLREFPTHGVKVTPSEDALMREAERVTG
Ga0307468_10085038313300031740Hardwood Forest SoilTHCGYEVIFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALSREAEKVTR
Ga0307468_10227162613300031740Hardwood Forest SoilMPTYLMSCTHCAYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTVAR
Ga0307471_10035683123300032180Hardwood Forest SoilMASYMMTCTHCGYEVMFRTEPDAKTEAVRHLRAFPTHGVKVTPSEDALIREAERLTR
Ga0307471_10401743813300032180Hardwood Forest SoilEEGPMPTYTMSCTHCAYEVPFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDALIREEERVTVAR
Ga0326729_101045733300033432Peat SoilMPSYTMSCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR
Ga0326729_106637023300033432Peat SoilMPSYTMSCTHCGYEAVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR
Ga0326726_1208653733300033433Peat SoilMPSYTMSCTHCGYEVVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMRE
Ga0316628_10118533723300033513SoilMPSYTMTCTHCGYEVVFRTEPDAKTEGVRHLRQHPTHGVKVTPSEDALMREAEKLTR
Ga0326723_0020000_8_1663300034090Peat SoilMSCTHCGYEAVFRTEPDAKTEGVRHLRQQPTHGVKVTPSEDALMREAEKVTR
Ga0370498_184247_236_4093300034155Untreated Peat SoilMPTYLMSCTHCGYEVAFRTEPDAKTEGVRHLLQFPAHGVKVTPSEDAMIRDEERVTA


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