Metagenome / Metatranscriptome Family F033159

Basic Information
Family ID	F033159
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	44 residues
Representative Sequence	VRLAVVDHGHAPDEAAFLQEIRERSGREPLGVVKTLLYRPELFG
Number of Associated Samples	154
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.15 %
% of genes near scaffold ends (potentially truncated)	98.88 %
% of genes from short scaffolds (< 2000 bps)	91.57 %
Associated GOLD sequencing projects	147
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (93.258 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.112 % of family members)
Environment Ontology (ENVO)	Unclassified (28.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.382 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF03471	CorC_HlyC	14.04
PF03928	HbpS-like	2.81
PF08544	GHMP_kinases_C	2.25
PF01872	RibD_C	2.25
PF07730	HisKA_3	2.25
PF00565	SNase	2.25
PF03734	YkuD	2.25
PF01321	Creatinase_N	1.69
PF10509	GalKase_gal_bdg	1.69
PF02423	OCD_Mu_crystall	1.12
PF00248	Aldo_ket_red	1.12
PF13229	Beta_helix	0.56
PF00226	DnaJ	0.56
PF05638	T6SS_HCP	0.56
PF01022	HTH_5	0.56
PF00246	Peptidase_M14	0.56
PF01625	PMSR	0.56
PF09851	SHOCT	0.56
PF11946	DUF3463	0.56
PF00258	Flavodoxin_1	0.56
PF02894	GFO_IDH_MocA_C	0.56
PF06662	C5-epim_C	0.56
PF00126	HTH_1	0.56
PF10417	1-cysPrx_C	0.56
PF03706	LPG_synthase_TM	0.56
PF06304	DUF1048	0.56
PF07831	PYNP_C	0.56
PF13463	HTH_27	0.56
PF12900	Pyridox_ox_2	0.56
PF00067	p450	0.56
PF00005	ABC_tran	0.56
PF00890	FAD_binding_2	0.56
PF00578	AhpC-TSA	0.56
PF04055	Radical_SAM	0.56
PF00140	Sigma70_r1_2	0.56
PF01794	Ferric_reduct	0.56
PF01152	Bac_globin	0.56
PF00206	Lyase_1	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	2.25
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.25
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.25
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	2.25
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	2.25
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.25
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.25
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.25
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	1.69
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	1.12
COG2124	Cytochrome P450	Defense mechanisms [V]	0.56
COG4817	DNA-binding ferritin-like protein (Dps family)	Replication, recombination and repair [L]	0.56
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.56
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.56
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.56
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.56
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.56
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG0213	Thymidine phosphorylase	Nucleotide transport and metabolism [F]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.26 %
Unclassified	root	N/A	6.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.26 %
Unclassified	root	N/A	6.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.26 %
Unclassified	root	N/A	6.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.04 %
Unclassified	root	N/A	6.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.12 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.36 %
Unclassified	root	N/A	6.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.46 %
Unclassified	root	N/A	6.74 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	21.35 %
Unclassified	root	N/A	6.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.06 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.69 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.12 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.12 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.56 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.35 %
Unclassified	root	N/A	6.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.06 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.69 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.12 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.56 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.35 %
Unclassified	root	N/A	6.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.06 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.12 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	0.56 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.56 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.35 %
Unclassified	root	N/A	6.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.06 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.12 %
unclassified Syntrophus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria)	0.56 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.56 %
Amycolatopsis decaplanina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis decaplanina	0.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.35 %
Unclassified	root	N/A	6.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.06 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.12 %
Syntrophus sp. PtaB.Bin138	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin138	0.56 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.56 %
Amycolatopsis decaplanina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis decaplanina	0.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig78255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
2170459006\|GBPF9FW02HYLX2	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
2170459007\|GJE5RH003GQSI2	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
2170459013\|GO6OHWN01ANCH3	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
2170459015\|G14TP7Y02I1XUP	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	626	Open in IMG/M
2170459023\|GZGNO2B01EDK8N	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
2189573000\|GPBTN7E01B7E3F	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	516	Open in IMG/M
3300000956\|JGI10216J12902_100064304	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300001532\|A20PFW1_1316810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1433	Open in IMG/M
3300001534\|A15PFW1_10331675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1351	Open in IMG/M
3300001536\|A1565W1_12097393	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300001978\|JGI24747J21853_1041124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300004153\|Ga0063455_100706258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis decaplanina	680	Open in IMG/M
3300004153\|Ga0063455_101554127	Not Available	519	Open in IMG/M
3300004156\|Ga0062589_102551926	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300004157\|Ga0062590_101161987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	749	Open in IMG/M
3300005093\|Ga0062594_102958513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	530	Open in IMG/M
3300005176\|Ga0066679_10446387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	847	Open in IMG/M
3300005179\|Ga0066684_10229577	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005332\|Ga0066388_100111103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3236	Open in IMG/M
3300005332\|Ga0066388_100138588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2992	Open in IMG/M
3300005332\|Ga0066388_102457221	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005365\|Ga0070688_101436457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300005365\|Ga0070688_101561881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300005366\|Ga0070659_100246781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1479	Open in IMG/M
3300005434\|Ga0070709_10556422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300005435\|Ga0070714_101141742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300005440\|Ga0070705_101757038	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005447\|Ga0066689_10498675	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005526\|Ga0073909_10208429	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005529\|Ga0070741_11173875	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005530\|Ga0070679_101581682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300005535\|Ga0070684_101516218	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005545\|Ga0070695_101775207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300005546\|Ga0070696_100183171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1555	Open in IMG/M
3300005563\|Ga0068855_100493312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1332	Open in IMG/M
3300005587\|Ga0066654_10703467	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005607\|Ga0070740_10152213	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005719\|Ga0068861_102285953	Not Available	542	Open in IMG/M
3300005840\|Ga0068870_10343408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	956	Open in IMG/M
3300006028\|Ga0070717_11466827	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300006031\|Ga0066651_10717692	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006032\|Ga0066696_10513426	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300006175\|Ga0070712_100015169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4956	Open in IMG/M
3300006175\|Ga0070712_100558532	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300006175\|Ga0070712_101725818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300006354\|Ga0075021_10439971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	821	Open in IMG/M
3300006604\|Ga0074060_11183642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	507	Open in IMG/M
3300006854\|Ga0075425_100192868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2341	Open in IMG/M
3300006854\|Ga0075425_101144941	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300006881\|Ga0068865_100055959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2747	Open in IMG/M
3300007821\|Ga0104323_121170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1609	Open in IMG/M
3300009093\|Ga0105240_11399086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300009176\|Ga0105242_10016226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5788	Open in IMG/M
3300010039\|Ga0126309_10923151	Not Available	580	Open in IMG/M
3300010043\|Ga0126380_10993329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300010227\|Ga0136219_1010825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300010375\|Ga0105239_12127514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300010398\|Ga0126383_10110526	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300010400\|Ga0134122_11989187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300010400\|Ga0134122_13365026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300010403\|Ga0134123_11134321	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010880\|Ga0126350_10925323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300010880\|Ga0126350_12119983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300011119\|Ga0105246_10108479	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2035	Open in IMG/M
3300011119\|Ga0105246_10753638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300012096\|Ga0137389_10095187	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300012198\|Ga0137364_11158094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300012199\|Ga0137383_10731657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	722	Open in IMG/M
3300012204\|Ga0137374_10932373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300012208\|Ga0137376_10216913	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300012209\|Ga0137379_10547036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1065	Open in IMG/M
3300012209\|Ga0137379_11181607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300012209\|Ga0137379_11241844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300012356\|Ga0137371_11166729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300012362\|Ga0137361_10734863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300012469\|Ga0150984_100513023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300012469\|Ga0150984_118609146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1470	Open in IMG/M
3300012911\|Ga0157301_10231695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300012912\|Ga0157306_10123291	Not Available	783	Open in IMG/M
3300012955\|Ga0164298_10869763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300012957\|Ga0164303_10178863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300012958\|Ga0164299_11480258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300012985\|Ga0164308_10173852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin138	1616	Open in IMG/M
3300012985\|Ga0164308_10597968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300012986\|Ga0164304_10297143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300012988\|Ga0164306_10740085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300012989\|Ga0164305_10929716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300012989\|Ga0164305_11858408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300013296\|Ga0157374_11511479	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300013296\|Ga0157374_12083535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300013765\|Ga0120172_1081583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	798	Open in IMG/M
3300015077\|Ga0173483_10031728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1930	Open in IMG/M
3300015201\|Ga0173478_10385283	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300015371\|Ga0132258_10646341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2660	Open in IMG/M
3300015374\|Ga0132255_102022518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300016371\|Ga0182034_10520851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300017792\|Ga0163161_10206842	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300017792\|Ga0163161_10732086	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300017944\|Ga0187786_10007083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2644	Open in IMG/M
3300017947\|Ga0187785_10334356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300017959\|Ga0187779_10588701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	744	Open in IMG/M
3300017961\|Ga0187778_10613641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300017966\|Ga0187776_11335210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300017974\|Ga0187777_10321115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	1061	Open in IMG/M
3300018060\|Ga0187765_10116209	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300018060\|Ga0187765_10943803	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300018064\|Ga0187773_10117503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300018089\|Ga0187774_10810951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300018431\|Ga0066655_11203581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300018433\|Ga0066667_10313514	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300018433\|Ga0066667_11858054	Not Available	547	Open in IMG/M
3300018433\|Ga0066667_12115752	Not Available	521	Open in IMG/M
3300018482\|Ga0066669_11159250	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300020080\|Ga0206350_10011582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300020081\|Ga0206354_10840194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300021344\|Ga0193719_10042375	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300022756\|Ga0222622_10736201	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300022915\|Ga0247790_10088307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300023097\|Ga0247757_10322778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300023266\|Ga0247789_1062585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300023275\|Ga0247776_10259141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300024290\|Ga0247667_1015947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1482	Open in IMG/M
3300025913\|Ga0207695_11228339	Not Available	630	Open in IMG/M
3300025914\|Ga0207671_10184890	Not Available	1623	Open in IMG/M
3300025914\|Ga0207671_10575287	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300025915\|Ga0207693_11157827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300025921\|Ga0207652_11768072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300025922\|Ga0207646_11221028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300025924\|Ga0207694_10695369	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300025926\|Ga0207659_10063671	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300025931\|Ga0207644_11093140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300025935\|Ga0207709_11740067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300025938\|Ga0207704_11710339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300025939\|Ga0207665_10852079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300025939\|Ga0207665_11427414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300026023\|Ga0207677_11724357	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300026067\|Ga0207678_11381815	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026078\|Ga0207702_11006934	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300026078\|Ga0207702_11764044	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300026116\|Ga0207674_10367354	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300026142\|Ga0207698_12301301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300027706\|Ga0209581_1274764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300027821\|Ga0209811_10138205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300028556\|Ga0265337_1136297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300028573\|Ga0265334_10182446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300028587\|Ga0247828_10785009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300028799\|Ga0307284_10086020	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300029957\|Ga0265324_10221060	Not Available	643	Open in IMG/M
3300031170\|Ga0307498_10438945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300031229\|Ga0299913_11936465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300031251\|Ga0265327_10154253	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300031716\|Ga0310813_11866120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300031726\|Ga0302321_100817831	Not Available	1052	Open in IMG/M
3300031740\|Ga0307468_101212071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300031819\|Ga0318568_10693347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300031847\|Ga0310907_10876006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300031903\|Ga0307407_10028375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2991	Open in IMG/M
3300031908\|Ga0310900_11322896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300031942\|Ga0310916_10767965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300032008\|Ga0318562_10504033	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300032008\|Ga0318562_10664799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300032017\|Ga0310899_10441355	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300032039\|Ga0318559_10291363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300032063\|Ga0318504_10341495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300032074\|Ga0308173_11426268	All Organisms → cellular organisms → Bacteria → Terrabacteria group	650	Open in IMG/M
3300032133\|Ga0316583_10276247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300032180\|Ga0307471_104192116	Not Available	509	Open in IMG/M
3300032205\|Ga0307472_102223609	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300032342\|Ga0315286_11603015	Not Available	619	Open in IMG/M
3300032770\|Ga0335085_10023598	All Organisms → cellular organisms → Bacteria	8703	Open in IMG/M
3300032892\|Ga0335081_10523632	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300032893\|Ga0335069_10430977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1541	Open in IMG/M
3300032898\|Ga0335072_10062535	All Organisms → cellular organisms → Bacteria	4935	Open in IMG/M
3300033290\|Ga0318519_10636358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300034090\|Ga0326723_0326408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300034195\|Ga0370501_0233653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300034820\|Ga0373959_0205506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.28%
Host-Associated	Host-Associated	23.60%
Engineered	Engineered	1.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.60%
Plants	Host-Associated → Plants	23.60%
Aquatic	Environmental → Aquatic	1.69%
Solid Waste	Engineered → Solid Waste	0.56%
Lab Enrichment	Engineered → Lab Enrichment	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.43%
Sediment	Environmental → Aquatic → Sediment	1.12%
Peat	Environmental → Terrestrial → Peat	1.12%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.12%
Freshwater	Environmental → Aquatic → Freshwater	0.56%
Grass	Engineered → Solid Waste → Grass	0.56%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.12%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.12%
Lake	Environmental → Aquatic → Freshwater → Lake	0.56%
Composting	Engineered → Solid Waste → Grass → Composting	0.56%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.12%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.12%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.12%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.56%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.56%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.25%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.12%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.12%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.12%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.12%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.12%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.12%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.56%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.56%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.56%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.56%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.56%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007821	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 Soapdenovo	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010227	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2	Engineered	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032133	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033159

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_00611250	2140918007	Soil	MRLTVVDSGHAPDEAAMLDQIRERTGREPLGVVKTLLYRPELFGLP
L01_06769060	2170459006	Grass Soil	VRLEIVDHGHAPDEAAFLQEIRERSGREPLGVVKTLLYRPELFGLPFSDEL
L02_00167290	2170459007	Grass Soil	LRLAVVDSGHGPNEAAALDQIRQRSGREPLGVVKTLM
N57_05663400	2170459013	Grass Soil	MRLAVVDQGHAPQEAAVLAAIREQSGVEPLGVVKTLLYRPELFGEP
4PV_04361290	2170459015	Switchgrass, Maize And Mischanthus Litter	MRLSVVDSGHAPEQAAVLDVIRERSGNEPLGVVKPLMYRPELF
FA3_01999080	2170459023	Grass Soil	MRLAIVDEGHAPPEAAMLAAIRERTGAEPLGVVKT
N55_04027660	2189573000	Grass Soil	MIRLSVVDAGHTGDEAEFLRLARERGGREPLGVVKTLL
JGI10216J12902_1000643043	3300000956	Soil	MRLAVVDHAHGPVEAALLEEIRERSGREPLGVVKTILYRPELFG
A20PFW1_13168101	3300001532	Permafrost	VRLSVVDSGHQPGEAAMLAAIRERSGAEPLGVVKTLLYR
A15PFW1_103316753	3300001534	Permafrost	VRLAVVDHGHAPAEAAILQEIRERMGAEPLGVVKTLMYRPELF
A1565W1_120973933	3300001536	Permafrost	VRLATVDRGHAPDEAAMLAEIAERSGREPLGVVKTLLYRPE
JGI24747J21853_10411243	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MIRLSVVDHGHAPDQAAFLQQARERSGREPFGVVKTLVYRPEIFGGP
Ga0063455_1007062581	3300004153	Soil	VNVRLACIDHGHAPEQAAMLAEIRERSGREPLGVVKTLLYRPEVFGGPFSEELDDVMR
Ga0063455_1015541272	3300004153	Soil	MRLSVVDGGHAPAEAAMLEAIGQRSGAEPLGVVKTLLYRP
Ga0062589_1025519262	3300004156	Soil	MRLSVVDSGHAPEQAAVLDVIRERSGNEPLGVVKTLMYRPELFGR
Ga0062590_1011619873	3300004157	Soil	VRLAVVDHGHAPPEAAMLEAIGQRTGTEPLGVVKTLLYRP
Ga0062594_1029585131	3300005093	Soil	VRLAVVDHGHRPDEAAVLDVIRERSGNEPLGVVKTLLYRP
Ga0066679_104463871	3300005176	Soil	MRLTVVDTGHAPAEAEVLGQIRERTGREPLGVVKTLLYRPDLFG
Ga0066684_102295773	3300005179	Soil	MRLAVVDAGHAPPEAAMLATIRERTGNEPLGVIKTLLYRPELFG
Ga0066388_1001111034	3300005332	Tropical Forest Soil	MRLAVLDEGHAAPEAEMLAAIRERTANEPLGVVKTLLYRPELFGEPFSEAL
Ga0066388_1001385881	3300005332	Tropical Forest Soil	MRLGVVDAGHAPPEAAMLAAIREQSGAEPLGVIKTLLYRPELFGEPFSE
Ga0066388_1024572211	3300005332	Tropical Forest Soil	MRLEVVDTGHAPPEAAMLAAIREQSGVEPLGVIKTLLYRPELF
Ga0070688_1014364571	3300005365	Switchgrass Rhizosphere	VRLSVVDSGHAPAEVAVLEAIRERSGHEPLGVVKTLLYRPE
Ga0070688_1015618812	3300005365	Switchgrass Rhizosphere	MRLSVVDNGHAPERAAVLATIRERSGHEPLGVVKTLMYRP
Ga0070659_1002467811	3300005366	Corn Rhizosphere	MRLAVVDSGHLPAEAAVLAEVRERSGAEPLGVVKTLYYRPELFGR
Ga0070709_105564223	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMRLSVVDHGHEPDAAAFLQQVRERSGREPLGVVKTLVYRPELFGGPFSEELDV
Ga0070714_1011417421	3300005435	Agricultural Soil	LRLAVVDHGHAPAEAALLAAIQERTGTEPLGVVKTLLYRPEL
Ga0070705_1017570382	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAVVDCGHAAPEAEMLRMIRERSATEPLGVVKTLLYRPELFGEPFSDAL
Ga0066689_104986751	3300005447	Soil	MRLAIVDEGHAPPEAAMLAAIREGTGAEPLGVIKTLLYRPELFGEPFSEAL
Ga0073909_102084291	3300005526	Surface Soil	MIRLECIDRGHAPDEAAMLAEIRERSGAEPLGVVKT
Ga0070741_111738751	3300005529	Surface Soil	MRLAVVDRGHAAGEAAVLETIRERSGNEPLGVVKTLLYRPEEFGRPFS
Ga0070679_1015816823	3300005530	Corn Rhizosphere	VRLAVVDSGHQQEEAAMLAAIRERSGAEPPGVVKTLLYRPELFG
Ga0070684_1015162181	3300005535	Corn Rhizosphere	MRLAVVDSGHAPVQAAMLDVIRERTGNEPLGVVKTLLYRPELFGLPFSEAL
Ga0070695_1017752071	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRLALVDTGHAPGEAAVLDQIRERTGREPLGVVKTLLYRPELFGLPFS
Ga0070696_1001831711	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MIRLSVVDHGHAPDQAAFLQQARERSGREPFGVVKTLVYRPEIFGGPFTGELH
Ga0068855_1004933123	3300005563	Corn Rhizosphere	MRLAVVDHGHAPDAAAVLAEIRERSGAEPLDVVKTLLYRPEL
Ga0066654_107034671	3300005587	Soil	MRIAVVDEGHALPEAEMLAAIRERTGAEPLGVVKTLLYRPELFGEPF
Ga0070740_101522131	3300005607	Surface Soil	MRLAVVDGNHAPAEAALLEQIRERSGVEPLGVVKTLLYRPELFGRPFSDALE
Ga0068861_1022859531	3300005719	Switchgrass Rhizosphere	VRLSVVDSGHAPEHAAMLDVIRERSGNEPLGVVKT
Ga0068870_103434083	3300005840	Miscanthus Rhizosphere	MRLSVVDKGHAPEQAAVLATIRERSGHEPLGVVKTLMYRPELF
Ga0070717_114668271	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRLAVVDHGHAPDEAAFLQEIRERSGREPLGVVKTLLYRPELFG
Ga0066651_107176921	3300006031	Soil	MRLAVVDQGHAPQEAAMLATIREQSRAEPLGVVKTLLYRPELFG
Ga0066696_105134261	3300006032	Soil	MRLAVVDQGHAPQEAAMLATIREQSRAEPLGVVKTLLYRP
Ga0070712_1000151691	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIRLECIDRGHAPDEAAMLAEIRERSGAEPLGVVKTLLYRPELFG
Ga0070712_1005585323	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRLGVVDAGHAPAEAAVLDEIRERTGREPLGVVKTLLYRPELFG
Ga0070712_1017258181	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRLAVVDSGHEPEAAEMLDAIRERSGAEPLAVVKTLL
Ga0075021_104399711	3300006354	Watersheds	VRLQVVDHGHAPEEAAALQEIRERMGAEPLGVIKTLMYRPELFGRPFSD
Ga0074060_111836423	3300006604	Soil	VIRLSVVDRGHAPAQAAFLEQARQRSGREPFGVVKTLVYRPEIFGAPFTREL
Ga0075425_1001928681	3300006854	Populus Rhizosphere	MRLGVVDGGHAAAEAQMLTMIRERSGTEPLGVVKTLLYR
Ga0075425_1011449413	3300006854	Populus Rhizosphere	MRLSVVGDGHAPAEAAMLGEIRSRSGHEPLGVVKTLLYRPELFG
Ga0068865_1000559591	3300006881	Miscanthus Rhizosphere	VRLSVVDSGHAPEHAAVLDVIRERSGNEPLGVVKTLLYR
Ga0104323_1211704	3300007821	Soil	VRLSVVDSGHQPDEAAMLDAIRERSGAEPLGVVKTLLYRPELFGTPFSE
Ga0105240_113990863	3300009093	Corn Rhizosphere	LRLAVVDNGHGPNEAAALDQIRERSGREPLGVVKTLMYRPELFGLPFSDVLAT
Ga0105242_1001622613	3300009176	Miscanthus Rhizosphere	VRLQVVDQGHRPEEAAVLDMIRQRSGREPLGVVKTLLYRPELFGTPFSEALDDV
Ga0126309_109231511	3300010039	Serpentine Soil	MRLSVVDSGHEATEAAVLDAIRERSGAEPLGVVKTIH
Ga0126380_109933291	3300010043	Tropical Forest Soil	VRLAIVDEGHAPPEAAMLAAIREQSGAEPLGVIKTLLYRPELFGEPFSE
Ga0136219_10108253	3300010227	Soil	VRLSVVDHGHAPAEATVLAEIREHSGAEPLGVVKTIYYRPELFGRPFSD
Ga0105239_121275141	3300010375	Corn Rhizosphere	MRLSVVDNGHAPEQAAVLATIRERSGHEPLGVVKTLMYRPEL
Ga0126383_101105261	3300010398	Tropical Forest Soil	MRLAVVDQGHAPAEAEVLAMIRERSGHEPLGVVKTLLYRPELFG
Ga0134122_119891871	3300010400	Terrestrial Soil	MRLSVVDHGHAPEQAAFLREARERSGREPFGVVKTLLYRPELFGAPFT
Ga0134122_133650261	3300010400	Terrestrial Soil	VRLSVVDSGHAPEHAALLDVIRERSGNEPLGVVKTLLYRPE
Ga0134123_111343213	3300010403	Terrestrial Soil	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKTLLYRPDLFGRPFSEALDVV
Ga0126350_109253231	3300010880	Boreal Forest Soil	VRLAIIDGGHAPDEAAMLLMIRERTGNEPLGVVKTLLYRPERFGRPFSDALDR
Ga0126350_121199831	3300010880	Boreal Forest Soil	VRLAVLDGGHAPDEVAMLAMIRERTGNEPLGVVKTL
Ga0105246_101084796	3300011119	Miscanthus Rhizosphere	MIRLSVVDHGHAPDQAAFLQQARERSGREPFGVVKTLVYRPEIFGGPFTA
Ga0105246_107536381	3300011119	Miscanthus Rhizosphere	MRLTVVDNGHAPEQAAVLATIRERSGHEPLGVVKTLMYRP
Ga0137389_100951875	3300012096	Vadose Zone Soil	MRLVAVDAGHAPAEAAVLDQIRERTGREPLGVVKTLLY
Ga0137364_111580943	3300012198	Vadose Zone Soil	LRLAVIDSGHAPDEAAMLAEIRARSGNEPLGVVKTLLYRPELFG
Ga0137383_107316573	3300012199	Vadose Zone Soil	MRLAVVDGGHAPAEAAVLEQIRLHSGREPVGVVKTLLY
Ga0137374_109323731	3300012204	Vadose Zone Soil	MRLTVVDTGHGPNEAAALDQIRQRTGREPLGVVKTLMYRP
Ga0137376_102169134	3300012208	Vadose Zone Soil	MRLAVVDAGHAPAEAAVLDQIRRHSGREPVGVVKTLLYRPELFGRPFS
Ga0137379_105470364	3300012209	Vadose Zone Soil	LRLAVVDSGHAPAEAAALDQIRQRSGRDPLGVVKTLLYRPDLFGRPFSQ
Ga0137379_111816073	3300012209	Vadose Zone Soil	VRLAVVDGGHAPAEAAVLAEIRERSGAEPLGVVKTLLYRPELFGR
Ga0137379_112418441	3300012209	Vadose Zone Soil	MRLAIVDNGHAPGEAAMLAEIRERSGHEPLGVVKTL
Ga0137371_111667293	3300012356	Vadose Zone Soil	MRLAIVDEGHAPPEAAMLAAMQERTGAEPLGVVKTLL
Ga0137361_107348631	3300012362	Vadose Zone Soil	MRLTVVDSGHAPDEAAVLAQIRERTGREPLGVVKT
Ga0150984_1005130233	3300012469	Avena Fatua Rhizosphere	MRLACVDHGHAPEEAAMLRMIRERSGGEPLGVVKTLLYRPELFGRPFSEELDRVM
Ga0150984_1186091465	3300012469	Avena Fatua Rhizosphere	MIRLSVVDSGHPPDQAAFLQEARERSGREPFGVIKTLVYRPEIFGEPFT
Ga0157301_102316953	3300012911	Soil	MRLSVVDNGHAPEQAAVLATIRERSGHEPLGVVKTLMDRPELFGLPFS
Ga0157306_101232911	3300012912	Soil	VRLSVVDSGHAPEHAAVLDVIRERSGNEPLGVVKTL
Ga0164298_108697631	3300012955	Soil	VRLAVVDSGHRPEEAAMLAAIRERSGAEPLGVVKTLL
Ga0164303_101788631	3300012957	Soil	VRLAVVDGGHAPAEAAMLDEIRARSGQEPLGVVKTLLYRPELF
Ga0164299_114802583	3300012958	Soil	VRLAVVEHGQAPDEADVLAMIRERSGAEPLGVVKTLLY
Ga0164308_101738521	3300012985	Soil	VRLAVVDHGHRPEEAAVLDVIRERSGNEPLGVVKTLLYRP
Ga0164308_105979681	3300012985	Soil	VRLAVVDSGHRPEEAAMLAAIRERSGAEPLGVVKT
Ga0164304_102971431	3300012986	Soil	VRLGVVDHGHAPDEAAVLAMIRERGGAEPLGVVKTLLYRP
Ga0164306_107400853	3300012988	Soil	MSIRLSVVDHGHAPDEAAMLAMIRERSGAEPLGVV
Ga0164305_109297161	3300012989	Soil	MRLAVVDCGHAAPEVEMLRMIRERSGTEPLGVVKTLLYRPE
Ga0164305_118584083	3300012989	Soil	MRLAVLDEGHAPSEAEMLAAIRERTANEPLGVIKTLLYRPEL
Ga0157374_115114791	3300013296	Miscanthus Rhizosphere	MSIRLSVIDHGHAPDEAAMLAMIRERSGAEPLGVVKTLLYRPEL
Ga0157374_120835353	3300013296	Miscanthus Rhizosphere	VRLAVVDHGHAPDEAAVLAMIRERSGAGPLGVVKTLLYRPELFGRPFS
Ga0120172_10815832	3300013765	Permafrost	MRLTVVDSGHAPDEAAVLDQIRERTGREPLGVVKTLLY
Ga0173483_100317281	3300015077	Soil	VRLSVVDSGHAPEHAAVLDVIRERSGNEPLGVVKTLLYRPEVFGQPFS
Ga0173478_103852831	3300015201	Soil	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKMLLYRPEVFGRP
Ga0132258_106463416	3300015371	Arabidopsis Rhizosphere	MRLGVVDSGHAAPETEMLAMIRERSGTEPLGVVKTLLYRPELFGEAF
Ga0132255_1020225181	3300015374	Arabidopsis Rhizosphere	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKTLLYRPEAFGQPFSEALD
Ga0182034_105208511	3300016371	Soil	VIRLAVLDRGHEPEEAAILDVIRERSGNEPLGVVKTLLYRPELF
Ga0163161_102068423	3300017792	Switchgrass Rhizosphere	VRLSVVDSGHAPAEAAVLETIRERSGHEPLGVVKTLLYRPE
Ga0163161_107320861	3300017792	Switchgrass Rhizosphere	VRLAVVDHGHRPEEADVLDVIRERSGNEPLGVVKTLLYRPDLFGRPF
Ga0187786_100070832	3300017944	Tropical Peatland	LIRLGVLDRGHAANEAAVLDMIRERSGAEPLGVVKTLLYRPELFAAFASLLNQCPF
Ga0187785_103343561	3300017947	Tropical Peatland	MRLAVVDQGHAEPEAAMLAAIRENTGNEPLGVIKTLLYRPELFGEPFSQ
Ga0187779_105887013	3300017959	Tropical Peatland	MIRLDVLDKGHAADEAAILDMIRERSGSEPLGVVKTLLYRPELFG
Ga0187778_106136413	3300017961	Tropical Peatland	MRLAVVDQGHAPAEAAMLDAIRERAGTEPLGVVKTLLYRPELFGEPFSEAL
Ga0187776_113352103	3300017966	Tropical Peatland	VRLDVVDRGHAPEEAAVLREIRERSGAEPLGVVKTLLYRPE
Ga0187777_103211151	3300017974	Tropical Peatland	VRLACVDSGHAPGEAAVLAQIRERSGREPLGVVKTLLYRPELFGGP
Ga0187765_101162091	3300018060	Tropical Peatland	VRLEAVDSGHAPAEAAVLDEIRARSGAEPLGVVKTLLYRPEL
Ga0187765_109438033	3300018060	Tropical Peatland	VRLACVEGGHAPGEAAVLAQIRERSGREPLGVVKTLLYRPELFG
Ga0187773_101175031	3300018064	Tropical Peatland	VRLDVVDHGHAPEEAAVLQEIRERSGAEPLGVVKT
Ga0187774_108109511	3300018089	Tropical Peatland	MRLAVVDTRHAPTEAAMLAEIRERTGSEPLGVIKTLLYRPELFGEPFSE
Ga0066655_112035811	3300018431	Grasslands Soil	VRLAVLDSGHAPAEREALAVIRERMQAEPLGVVKTLLYRPELFGAPF
Ga0066667_103135141	3300018433	Grasslands Soil	VRLAVVDGGHAPAEAAVLEEIRERSGAEPLGVVKTLHYRPELF
Ga0066667_118580543	3300018433	Grasslands Soil	MRLAIVDGGHAPAEAAILEAIGQRSGAEPLGLVKAPL
Ga0066667_121157521	3300018433	Grasslands Soil	MRLAVVDHGHAPQEAAMLATIREQSRAEPLGGVKTRLYRPE
Ga0066669_111592501	3300018482	Grasslands Soil	MRLDVVDRGHAQPEAAALEAIRDRSGQEPLGVIKTLLYRPDLFGRPFSEALDR
Ga0206350_100115821	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAVVDHGHTPDRAAMLAEIRERSGGEPLGVVKTLLY
Ga0206354_108401941	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAVVDSGHLPAEAAVLAEVRERSGAEPLGVVKTL
Ga0193719_100423754	3300021344	Soil	MRLTVVDSGHGPNEAAALDQIRQRTGREPLGVVKTLMYRPELFGMPFS
Ga0222622_107362011	3300022756	Groundwater Sediment	MRLSVIDHGHAPDEAAMLAMIRERSGAEPLGVVKTLLYRPELFGR
Ga0247790_100883073	3300022915	Soil	VRLSVVDSGHAPEHAAVLDVIRERSGNEPLGVVKTLLYRPEVF
Ga0247757_103227782	3300023097	Plant Litter	VRLQVVDQGHRPEEAAVLDMIRERSGREPLGVVKTLLYRPELFGTPFSEALDD
Ga0247789_10625851	3300023266	Soil	MRLSVVDNGHAPEQAAVLATIRERSGHEPLGVVKTLMYRPELFG
Ga0247776_102591411	3300023275	Plant Litter	VRLQVVDQGHRPEEAAVLDMIRERSGREPLGVVKTLLYRPELFGTP
Ga0247667_10159474	3300024290	Soil	VRLTVVDSGHAPDEAAMLDLIRERSGAEPLGVVKTLLYRPELFGTPFSEELD
Ga0207695_112283393	3300025913	Corn Rhizosphere	MRLAVVDQGHAPPEAAMLAAIREGSGAEPLGVVKTLLYRPELFGEPFSEAL
Ga0207671_101848903	3300025914	Corn Rhizosphere	MRLAVVDQGHAPPEAAMLAAIREGSGAEPLGVVKTLLYRPELFGEPFSEALDVVMRRLAG
Ga0207671_105752873	3300025914	Corn Rhizosphere	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKTLLYRPDLF
Ga0207693_111578271	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VIRLSVVDHGHEPDAAAFLQQVRERSGREPLGVVKTLVY
Ga0207652_117680721	3300025921	Corn Rhizosphere	VRLQVVDQGHRPEEAAVLDMIRERSGREPLGVVKTLLYRPELFGTPFS
Ga0207646_112210281	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAVVDAGHAPDEAAVLDQIRERTGREPLGVVKTLLYRPELFGLPFSTAL
Ga0207694_106953693	3300025924	Corn Rhizosphere	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKTLLYLPDL
Ga0207659_100636715	3300025926	Miscanthus Rhizosphere	VRLQVVDQGHRPEEAAVLDMIRERSGREPLGVVKTLLYRPELFGTPFSE
Ga0207644_110931401	3300025931	Switchgrass Rhizosphere	VRLSVVGSGHAPAEVAVLEAIRERSGHEPLGVVKTLLYRPELFGQP
Ga0207709_117400671	3300025935	Miscanthus Rhizosphere	MMRLSVVDRGHAPEQAAFLQTARERSGREPFGVVKTLVYRPEIFGKPFTGE
Ga0207704_117103393	3300025938	Miscanthus Rhizosphere	AVTIRLDVVDRGHATAEAAMLDVVRQRSGAEPLGVVKTLLYRPELFGTPSRRRSTR
Ga0207665_108520793	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAVVDTGHAPAEAAVLDQIRERSGREPLGVVKTLLYRPELFGLPFSLAL
Ga0207665_114274143	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLDQGHAPDEAAMLAEIRERSGHEPLGVVKTLLYRPELFG
Ga0207677_117243573	3300026023	Miscanthus Rhizosphere	VIRLDVVDHGHAPGEAAMLAEIRERSGQEPLGVVKT
Ga0207678_113818153	3300026067	Corn Rhizosphere	VRLAVVDHGHGPEEAAVLDVIRERSGNEPLGVVKTLLYRPEL
Ga0207702_110069343	3300026078	Corn Rhizosphere	VRLQVVDQGHRPAEAAVLDMIRERSGREPLGVVKTLLYRPELFG
Ga0207702_117640443	3300026078	Corn Rhizosphere	MRLGVVDGGHAAAEAEMLAMIRERSGTEPLGVVKTL
Ga0207674_103673541	3300026116	Corn Rhizosphere	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKTLLY
Ga0207698_123013011	3300026142	Corn Rhizosphere	MRLAVVDCGHAAPEAEMLRMIRERSATEPLGVVKTLLYRPELFGETFSAALDVA
Ga0209581_12747642	3300027706	Surface Soil	VIRLDCVDHGHSGEAAAMLAEIRERSGREPLGVIKTLLYRSELFGEPFSEELDA
Ga0209811_101382053	3300027821	Surface Soil	MRLSVVDSGHAAGEAAFLEQARQASGREPLGVVKTLLYRPELFGR
Ga0265337_11362973	3300028556	Rhizosphere	PEQAAFLQMARERSGREPLGVVKTLLYRPELFGGPFTD
Ga0265334_101824463	3300028573	Rhizosphere	VRLEIVDSGHAPAEAAVLEAMRAEFGREPSGVVKTLYYR
Ga0247828_107850093	3300028587	Soil	VRLSVVDSGHAPEHAALLDVIRERSGNEPLGVVKTLLYRPELFGQPFSEALG
Ga0307284_100860201	3300028799	Soil	VIRLSVVDHGHAPEQAAFLQEARERSGREPFGVVKTLLYRPELFGRPFTGEL
Ga0265324_102210603	3300029957	Rhizosphere	MIRLSVVDHGHAPEQAAFLQMARERSGREPLGVVK
Ga0307498_104389453	3300031170	Soil	MRLAVVDQGHAPQEAAMLAAIREQSGVEPLGVVKTLL
Ga0299913_119364653	3300031229	Soil	MRLAVVDHGHGPAEAAVLDAIRERSGAEPLGVVKTLYYRPELFGRAFSDAV
Ga0265327_101542531	3300031251	Rhizosphere	MRLGVVDHGHAPDEAAFLADIRERSGREPLGVVKTLLYRPELFGLPFSDAL
Ga0310813_118661203	3300031716	Soil	MRLSVVDNGHAPEQAAVLATIRERSGHEPLGVVKTLMYRPELFGL
Ga0302321_1008178311	3300031726	Fen	MRLDVVDHGHAPDEAAFLAEIRERSGREPLGVVKTLLYRPELFG
Ga0307468_1012120713	3300031740	Hardwood Forest Soil	MSLAVLDEGHAPAEAEMLATIRERAATEPLGVVKTLLYRPQLFGEPFSEALEVAM
Ga0318568_106933471	3300031819	Soil	VRLAVLDEGHAAPEAEMLAAIRERTANEPLGVVKTLL
Ga0310907_108760062	3300031847	Soil	VRLAVVDHGHRPDEAAVLDVIRERSGNEPLGVVKTLLYRPELFGQPFS
Ga0307407_100283753	3300031903	Rhizosphere	MRLSVVDSGHGAAETAVLDAIRERSGAEPLGVVKTIYYRPELF
Ga0310900_113228961	3300031908	Soil	VRLSVVDSGHAPEHAALLDVIRERSGNEPLGVVKTLLYRPELFGQPFSEALED
Ga0310916_107679651	3300031942	Soil	VIRLAVLDRGHEPEEAAILDVIRERSGNEPLGVVKTLLYRPELFGTP
Ga0318562_105040331	3300032008	Soil	MRLSVLESGHAPAEAAVLDEMRARSGAEPLDVVKTLLY
Ga0318562_106647991	3300032008	Soil	VIRLAVVDHGHAPAEAAFLRQARERTVRESLGVVKTLLY
Ga0310899_104413553	3300032017	Soil	VRLAVVDHGHRPEEAAVLDMIRERSGNEPLGVVKTLLYL
Ga0318559_102913631	3300032039	Soil	VIRLAVLDRGHEPEEAAILDVIRERSGNEPLGVVK
Ga0318504_103414951	3300032063	Soil	VIRLAVLDRGHEPEEAAILDVIRERSGNEPLGVVKTLLY
Ga0308173_114262681	3300032074	Soil	MRLAVVDRGHAPPEAAMLASIRERTGAEPLGVVKTLLYR
Ga0316583_102762473	3300032133	Rhizosphere	MRLAVVDSGHAPAEAAMLAQIRERSGGEPLGVVKTLLYQPELFGEPFSDAL
Ga0307471_1041921161	3300032180	Hardwood Forest Soil	VRLAVVDSGHAPDETGVLDQIRERTGREPLGVVKTLLY
Ga0307472_1022236091	3300032205	Hardwood Forest Soil	RRCHGRDRVIRLTVVDRGHAPDEAAFLEQARERSGREPFGVV
Ga0315286_116030151	3300032342	Sediment	VRFAVVDHGHAPAEAAILQEIRERTGAEPLGVVKT
Ga0335085_100235981	3300032770	Soil	VIRLTVLDHGHAPAEAAPIAAARAAGREPLGVQKTLLYRPELFGRAFSDELDRAMR
Ga0335081_105236321	3300032892	Soil	MRLEAVDGGHAPPEAAMLAEIAARSGREPLGVVKT
Ga0335069_104309771	3300032893	Soil	VIRLDVIDRGHAADEAAILEIIRERTGNEPLGVVKTLLYWPELFG
Ga0335072_100625351	3300032898	Soil	MRLAVLDEGHAQPESEMLAAIRERTGNEPLGVIKTLLYRPELFGEPFSEALEIV
Ga0318519_106363581	3300033290	Soil	VIRLAVLDRGHEPEEAAILDVIRERSGNEPLGVVKTLLYRPELFGTPFS
Ga0326723_0326408_529_690	3300034090	Peat Soil	MIRLDVLDRGHAPDEAAMLAMIRERSGNEPLGVVKTLLYRPDLFGTPFSEELDR
Ga0370501_0233653_533_652	3300034195	Untreated Peat Soil	MRLAVVDHGHAPAEAAFLAEVRERSGREPLGVVKTLLYRP
Ga0373959_0205506_1_165	3300034820	Rhizosphere Soil	MRLAVVDCGHAAPEAEMLRMIRERSATEPLGVVKTLLYRPELFGEPFSAALDVAM

Hidden Markov Model


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